RLG00000013129

Lysine histidine transporter-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
26574910 .. 26577768
2859 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013129

Sequence Viewer

Length: 1491 bp
ATGGAAGAGGTGGTGGTTATGGAAACAGATTGCAGGGCAGAGTTAACAAGGGGACATTCCTTTCACAGTTTCAGTATCAGAAGCTCATCAGAGTCTGCTCAAGTCAATCCCATCACAACCAGTCCTCCTTGTGGAGGAGAAGAAGATGGTACAAACTGGAGAGGCCCAGGTGGTGGTGGTGAGCTCAATCCACTAGATGCTTGGCTACCCATCACAGAGTCCAGGAATGGGAATACCTTTTCTGTTACCTTCCATTTACTCTGTTCTGGAATTGGATTCCAAGCCCTTTTACTTCCATTTGCATTTGTCACTCTTGGATGGGCATGGGGAATCATATGCTTGTCACTAGCATTTGCATGGCAACTCTACACTATATGGCTCCTCGTTCAGCTACACGAATCTGAATCTGGAATTCGTTACAGTAGATACATCTATCTCGCTGTAACAGCATTTGGTCCAAAGTTAGGGAAGTTGCTAGGCATGTTCCCAGTGATGTATCTATCTGGGGGTACATGTGTGCAATTGATTATCATAGGAGGTTCCACCATAAAGCTTTTCTTCAATACTGTTTGTGATGCCAAGTCAGTGACCGCTACAGAATGCTTCTTGATGTTCACATGCTTAGCGATTGCTGGGGCTCAGTTTCCCAATCTGAACTCCATGGCTAGAGTTTCTTTCATTGGCACCATCACAGCAATTGTCTACTGTACTCTGATTTGGGCCCTTTCAATTGCCAAGGGAAGGCATGATGATACATCATATGATCCACCACTGCTGGAGTCCAACATGGATAGATTTGGTGGTATACTGAATGCACTTGGCATCATTTTTCTTGCATTCAGAGGTCATAATGTAATTCTTGAAATACAGGGGACATTGCCATCAAGTCCAAAACATCCAACTCGTAAGCCCATGTGGAGAGGGGTGATTATATCATATGCAGTTATAGCTATGTGTTTGCTTCCTCTTGCCGTATGCGGATTTTGGGCTTATGGAAACAAGGTACCATCGTCAATTGGAGAAATATTGATAGCAGCTGCACAATTTCGCGGACATAAAACCTCGAAATTTGTATTGGGACTAATTTGCATACTAGTAGTGGTTAGCTGCTTAAGTGCGTTTCAAATCTATGGCTTGGTAGTGTTTGACAATTTGGAGTTGAGGTACTCAAGCAAGAAGACGAAGCCTTGTGCAAGGTGGCTACGCGTAGCTTTTCGGATTTTTTTTGGTGTATTTGTATTCTTCATGGCAATGGCTTTCCCGTTCTTGATAAGCTTGGCAGTTCTAATTGGAGGCTTGGCATTTCCTTTAACATATGCTCATCCATGTTTGATGTGGATTGCAATCAAGAAACCAAAGCGAAAAGGTGTCATATGGTGTATTAACATGGGACTTGGATGCTTAGGCCTGTCTTTGGGTGTTCTTTTAGTTGTTGCTGCATCATGGAATATAGCTCACAACGGCCTAAATGCCAACTTCTTCAGGCCTTAA

Protein Analysis

497

Amino Acids

54.32

Weight (kDa)

8.99

Isoelectric Point (pI)

34.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 76 - 482 1.5e-52 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1003
AccB1I GGYRCC 2 cut(s) 683, 1003
AccB7I CCANNNNNTGG 1 cut(s) 173
AccI GTMKAC 2 cut(s) 702, 805
AccII CGCG 2 cut(s) 1050, 1206
AciI CCGC 3 cut(s) 591, 978, 1050
AclWI GGATC 1 cut(s) 758
AcsI RAATTY 2 cut(s) 411, 1067
AcuI CTGAAG 1 cut(s) 1465
AfaI GTAC 5 cut(s) 151, 511, 709, 1005, 1166
AfiI CCNNNNNNNGG 7 cut(s) 131, 134, 173, 228, 464, 741, 1414
AflII CTTAAG 1 cut(s) 1111
AflIII ACRYGT 2 cut(s) 512, 1204
AgsI TTSAA 4 cut(s) 562, 729, 863, 1124
AhlI ACTAGT 1 cut(s) 1093
AjnI CCWGG 2 cut(s) 166, 221
AjuI GAANNNNNNNTTGG 2 cut(s) 1058, 1090
Alw21I GWGCWC 1 cut(s) 186
AlwI GGATC 1 cut(s) 758
AlwNI CAGNNNCTG 1 cut(s) 95
AoxI GGCC 5 cut(s) 163, 720, 1405, 1462, 1484
ApaI GGGCCC 1 cut(s) 724
ApeKI GCWGC 4 cut(s) 1034, 1037, 1107, 1436
ApoI RAATTY 2 cut(s) 411, 1067
Asp718I GGTACC 1 cut(s) 1003
AspS9I GGNCC 4 cut(s) 164, 455, 720, 721
AsuHPI GGTGA 2 cut(s) 191, 937
AvaII GGWCC 1 cut(s) 455
BaeGI GKGCMC 1 cut(s) 724
BaeI ACNNNNGTAYC 4 cut(s) 501, 534, 995, 1028
BanI GGYRCC 2 cut(s) 683, 1003
BanII GRGCYC 3 cut(s) 186, 640, 724
BbsI GAAGAC 1 cut(s) 1184
Bbv12I GWGCWC 1 cut(s) 186
BbvI GCAGC 4 cut(s) 1024, 1046, 1094, 1423
BccI CCATC 7 cut(s) 119, 140, 218, 312, 695, 889, 1015
BceAI ACGGC 2 cut(s) 956, 1477
BciT130I CCWGG 2 cut(s) 168, 223
BcuI ACTAGT 1 cut(s) 1093
BfaI CTAG 5 cut(s) 194, 347, 476, 666, 1094
BfmI CTRYAG 1 cut(s) 594
BfrI CTTAAG 1 cut(s) 1111
BisI GCNGC 4 cut(s) 1035, 1038, 1108, 1437
BlpI GCTNAGC 1 cut(s) 622
BlsI GCNGC 4 cut(s) 1036, 1039, 1109, 1438
Bme1390I CCNGG 2 cut(s) 168, 223
Bme18I GGWCC 1 cut(s) 455
BmgT120I GGNCC 4 cut(s) 164, 455, 720, 721
BmiI GGNNCC 5 cut(s) 380, 541, 685, 722, 1005
BmrFI CCNGG 2 cut(s) 168, 223
BmrI ACTGGG 1 cut(s) 482
BmsI GCATC 5 cut(s) 187, 565, 831, 1388, 1448
BmuI ACTGGG 1 cut(s) 482
BpiI GAAGAC 1 cut(s) 1184
BpmI CTGGAG 2 cut(s) 178, 797
Bpu10I CCTNAGC 1 cut(s) 1402
Bpu1102I GCTNAGC 1 cut(s) 622
BpuEI CTTGAG 2 cut(s) 84, 1153
BsaBI GATNNNNATC 1 cut(s) 1343
BsaJI CCNNGG 3 cut(s) 166, 660, 735
BsaXI ACNNNNNCTCC 4 cut(s) 109, 139, 1148, 1178
Bsc4I CCNNNNNNNGG 7 cut(s) 131, 134, 173, 228, 464, 741, 1414
Bse1I ACTGG 3 cut(s) 120, 161, 488
Bse3DI GCAATG 2 cut(s) 875, 1257
Bse8I GATNNNNATC 1 cut(s) 1343
BseBI CCWGG 2 cut(s) 168, 223
BseDI CCNNGG 3 cut(s) 166, 660, 735
BseGI GGATG 4 cut(s) 323, 895, 1321, 1403
BseJI GATNNNNATC 1 cut(s) 1343
BseLI CCNNNNNNNGG 7 cut(s) 131, 134, 173, 228, 464, 741, 1414
BseMI GCAATG 2 cut(s) 875, 1257
BseMII CTCAG 1 cut(s) 653
BseNI ACTGG 3 cut(s) 120, 161, 488
BseRI GAGGAG 2 cut(s) 150, 371
BseSI GKGCMC 1 cut(s) 724
BseXI GCAGC 4 cut(s) 1024, 1046, 1094, 1423
BseYI CCCAGC 1 cut(s) 632
BsgI GTGCAG 1 cut(s) 1023
Bsh1236I CGCG 2 cut(s) 1050, 1206
BshFI GGCC 5 cut(s) 165, 722, 1407, 1464, 1486
BshNI GGYRCC 2 cut(s) 683, 1003
BsiHKAI GWGCWC 1 cut(s) 186
BslFI GGGAC 4 cut(s) 66, 886, 1092, 1404
BslI CCNNNNNNNGG 7 cut(s) 131, 134, 173, 228, 464, 741, 1414
BsmFI GGGAC 4 cut(s) 66, 886, 1092, 1404
BsmI GAATGC 3 cut(s) 605, 817, 836
BsnI GGCC 5 cut(s) 165, 722, 1407, 1464, 1486
Bsp120I GGGCCC 1 cut(s) 720
Bsp1286I GDGCHC 3 cut(s) 186, 640, 724
Bsp143I GATC 1 cut(s) 763
Bsp1720I GCTNAGC 1 cut(s) 622
Bsp19I CCATGG 1 cut(s) 660
BspACI CCGC 3 cut(s) 591, 978, 1050
BspANI GGCC 5 cut(s) 165, 722, 1407, 1464, 1486
BspCNI CTCAG 1 cut(s) 652
BspFNI CGCG 2 cut(s) 1050, 1206
BspLI GGNNCC 5 cut(s) 380, 541, 685, 722, 1005
BspPI GGATC 1 cut(s) 758
BspT107I GGYRCC 2 cut(s) 683, 1003
BspTI CTTAAG 1 cut(s) 1111
BsrDI GCAATG 2 cut(s) 875, 1257
BsrI ACTGG 3 cut(s) 120, 161, 488
BssECI CCNNGG 3 cut(s) 166, 660, 735
BssMI GATC 1 cut(s) 763
BssNAI GTATAC 1 cut(s) 806
BssT1I CCWWGG 2 cut(s) 660, 735
Bst1107I GTATAC 1 cut(s) 806
Bst2UI CCWGG 2 cut(s) 168, 223
Bst4CI ACNGT 4 cut(s) 68, 422, 568, 707
BstAFI CTTAAG 1 cut(s) 1111
BstDEI CTNAG 3 cut(s) 622, 639, 1402
BstDSI CCRYGG 1 cut(s) 660
BstENI CCTNNNNNAGG 1 cut(s) 132
BstF5I GGATG 4 cut(s) 323, 895, 1321, 1403
BstFNI CGCG 2 cut(s) 1050, 1206
BstKTI GATC 1 cut(s) 766
BstMBI GATC 1 cut(s) 763
BstMWI GCNNNNNNNGC 2 cut(s) 446, 947
BstNI CCWGG 2 cut(s) 168, 223
BstNSI RCATGY 3 cut(s) 484, 516, 621
BstSCI CCNGG 2 cut(s) 166, 221
BstSFI CTRYAG 1 cut(s) 594
BstSLI GKGCMC 1 cut(s) 724
BstUI CGCG 2 cut(s) 1050, 1206
BstV1I GCAGC 4 cut(s) 1024, 1046, 1094, 1423
BstV2I GAAGAC 1 cut(s) 1184
BstZ17I GTATAC 1 cut(s) 806
BsuRI GGCC 5 cut(s) 165, 722, 1407, 1464, 1486
BtgI CCRYGG 1 cut(s) 660
BtsCI GGATG 4 cut(s) 323, 895, 1321, 1403
BtsI GCAGTG 1 cut(s) 770
BtsIMutI CAGTG 3 cut(s) 495, 591, 770
CaiI CAGNNNCTG 1 cut(s) 95
Cfr13I GGNCC 4 cut(s) 164, 455, 720, 721
Csp6I GTAC 5 cut(s) 150, 510, 708, 1004, 1165
CviQI GTAC 5 cut(s) 150, 510, 708, 1004, 1165
DdeI CTNAG 3 cut(s) 622, 639, 1402
DpnI GATC 1 cut(s) 765
DpnII GATC 1 cut(s) 763
Ecl136II GAGCTC 1 cut(s) 184
Eco130I CCWWGG 2 cut(s) 660, 735
Eco147I AGGCCT 2 cut(s) 1407, 1486
Eco24I GRGCYC 3 cut(s) 186, 640, 724
Eco47I GGWCC 1 cut(s) 455
Eco53kI GAGCTC 1 cut(s) 184
Eco57I CTGAAG 1 cut(s) 1465
EcoICRI GAGCTC 1 cut(s) 184
EcoNI CCTNNNNNAGG 1 cut(s) 132
EcoO109I RGGNCCY 1 cut(s) 721
EcoRI GAATTC 1 cut(s) 411
EcoRII CCWGG 2 cut(s) 166, 221
EcoT14I CCWWGG 2 cut(s) 660, 735
EcoT38I GRGCYC 3 cut(s) 186, 640, 724
ErhI CCWWGG 2 cut(s) 660, 735
FalI AAGNNNNNCTT 2 cut(s) 542, 574
FaqI GGGAC 4 cut(s) 66, 886, 1092, 1404
FauNDI CATATG 5 cut(s) 335, 760, 937, 1315, 1373
FblI GTMKAC 2 cut(s) 702, 805
Fnu4HI GCNGC 4 cut(s) 1035, 1038, 1108, 1437
FokI GGATG 4 cut(s) 330, 882, 1308, 1410
FriOI GRGCYC 3 cut(s) 186, 640, 724
Fsp4HI GCNGC 4 cut(s) 1035, 1038, 1108, 1437
FspBI CTAG 5 cut(s) 194, 347, 476, 666, 1094
GluI GCNGC 4 cut(s) 1035, 1038, 1108, 1437
GsaI CCCAGC 1 cut(s) 636
GsuI CTGGAG 2 cut(s) 178, 797
HaeIII GGCC 5 cut(s) 165, 722, 1407, 1464, 1486
HincII GTYRAC 1 cut(s) 45
HindII GTYRAC 1 cut(s) 45
HindIII AAGCTT 2 cut(s) 551, 1273
HinfI GANTC 7 cut(s) 92, 218, 276, 330, 398, 404, 779
HpaI GTTAAC 1 cut(s) 45
HphI GGTGA 2 cut(s) 191, 937
Hpy166II GTNNAC 4 cut(s) 45, 615, 703, 806
Hpy188I TCNGA 7 cut(s) 80, 91, 403, 654, 714, 842, 1218
Hpy188III TCNNGA 6 cut(s) 267, 408, 607, 860, 1267, 1348
Hpy8I GTNNAC 4 cut(s) 45, 615, 703, 806
HpyAV CCTTC 2 cut(s) 259, 735
HpyCH4III ACNGT 4 cut(s) 68, 422, 568, 707
HpyF10VI GCNNNNNNNGC 2 cut(s) 446, 947
HpyF3I CTNAG 3 cut(s) 622, 639, 1402
KpnI GGTACC 1 cut(s) 1007
KspAI GTTAAC 1 cut(s) 45
Kzo9I GATC 1 cut(s) 763
LmnI GCTCC 1 cut(s) 384
Lsp1109I GCAGC 4 cut(s) 1024, 1046, 1094, 1423
LweI GCATC 5 cut(s) 187, 565, 831, 1388, 1448
MaeI CTAG 5 cut(s) 194, 347, 476, 666, 1094
MaeIII GTNAC 6 cut(s) 244, 307, 342, 416, 442, 586
MalI GATC 1 cut(s) 765
MboI GATC 1 cut(s) 763
MboII GAAGA 7 cut(s) 17, 152, 155, 550, 1189, 1234, 1471
MfeI CAATTG 4 cut(s) 521, 696, 729, 1014
MhlI GDGCHC 3 cut(s) 186, 640, 724
MluI ACGCGT 1 cut(s) 1204
MlyI GAGTC 3 cut(s) 101, 227, 788
MmeI TCCRAC 2 cut(s) 807, 923
MseI TTAA 5 cut(s) 44, 1112, 1310, 1383, 1489
MslI CAYNNNNRTG 2 cut(s) 355, 1250
MspA1I CMGCKG 1 cut(s) 1037
MspCI CTTAAG 1 cut(s) 1111
MspR9I CCNGG 2 cut(s) 168, 223
MunI CAATTG 4 cut(s) 521, 696, 729, 1014
Mva1269I GAATGC 3 cut(s) 605, 817, 836
MvaI CCWGG 2 cut(s) 168, 223
MvnI CGCG 2 cut(s) 1050, 1206
MwoI GCNNNNNNNGC 2 cut(s) 446, 947
NcoI CCATGG 1 cut(s) 660
NdeI CATATG 5 cut(s) 335, 760, 937, 1315, 1373
NdeII GATC 1 cut(s) 763
NlaIV GGNNCC 5 cut(s) 380, 541, 685, 722, 1005
NmuCI GTSAC 3 cut(s) 307, 342, 586
NspI RCATGY 3 cut(s) 484, 516, 621
PceI AGGCCT 2 cut(s) 1407, 1486
PciI ACATGT 1 cut(s) 512
PctI GAATGC 3 cut(s) 605, 817, 836
PfeI GAWTC 4 cut(s) 276, 330, 398, 404
PflMI CCANNNNNTGG 1 cut(s) 173
PfoI TCCNGGA 1 cut(s) 221
PkrI GCNGC 4 cut(s) 1036, 1039, 1109, 1438
PleI GAGTC 3 cut(s) 100, 226, 787
PpsI GAGTC 3 cut(s) 100, 226, 787
PscI ACATGT 1 cut(s) 512
Psp124BI GAGCTC 1 cut(s) 186
Psp6I CCWGG 2 cut(s) 166, 221
PspFI CCCAGC 1 cut(s) 632
PspGI CCWGG 2 cut(s) 166, 221
PspN4I GGNNCC 5 cut(s) 380, 541, 685, 722, 1005
PspOMI GGGCCC 1 cut(s) 720
PspPI GGNCC 4 cut(s) 164, 455, 720, 721
PstNI CAGNNNCTG 1 cut(s) 95
PvuII CAGCTG 1 cut(s) 1037
RsaI GTAC 5 cut(s) 151, 511, 709, 1005, 1166
RsaNI GTAC 5 cut(s) 150, 510, 708, 1004, 1165
RseI CAYNNNNRTG 2 cut(s) 355, 1250
SacI GAGCTC 1 cut(s) 186
SaqAI TTAA 5 cut(s) 44, 1112, 1310, 1383, 1489
SatI GCNGC 4 cut(s) 1035, 1038, 1108, 1437
Sau3AI GATC 1 cut(s) 763
Sau96I GGNCC 4 cut(s) 164, 455, 720, 721
SchI GAGTC 3 cut(s) 101, 227, 788
ScrFI CCNGG 2 cut(s) 168, 223
SduI GDGCHC 3 cut(s) 186, 640, 724
SfaNI GCATC 5 cut(s) 187, 565, 831, 1388, 1448
SfcI CTRYAG 1 cut(s) 594
SinI GGWCC 1 cut(s) 455
SmiMI CAYNNNNRTG 2 cut(s) 355, 1250
SmlI CTYRAG 3 cut(s) 99, 1111, 1168
SmoI CTYRAG 3 cut(s) 99, 1111, 1168
SpeI ACTAGT 1 cut(s) 1093
SseBI AGGCCT 2 cut(s) 1407, 1486
SsiI CCGC 3 cut(s) 591, 978, 1050
SspI AATATT 1 cut(s) 1026
SspMI CTAG 5 cut(s) 194, 347, 476, 666, 1094
SstI GAGCTC 1 cut(s) 186
StuI AGGCCT 2 cut(s) 1407, 1486
StyD4I CCNGG 2 cut(s) 166, 221
StyI CCWWGG 2 cut(s) 660, 735
TaaI ACNGT 4 cut(s) 68, 422, 568, 707
TaqI TCGA 1 cut(s) 1064
TatI WGTACW 1 cut(s) 707
TfiI GAWTC 4 cut(s) 276, 330, 398, 404
Tru1I TTAA 5 cut(s) 44, 1112, 1310, 1383, 1489
Tru9I TTAA 5 cut(s) 44, 1112, 1310, 1383, 1489
TscAI CASTG 3 cut(s) 495, 591, 777
TseFI GTSAC 3 cut(s) 307, 342, 586
TseI GCWGC 4 cut(s) 1034, 1037, 1107, 1436
Tsp45I GTSAC 3 cut(s) 307, 342, 586
TspDTI ATGAA 2 cut(s) 667, 1234
TspRI CASTG 3 cut(s) 495, 591, 777
Van91I CCANNNNNTGG 1 cut(s) 173
Vha464I CTTAAG 1 cut(s) 1111
VpaK11BI GGWCC 1 cut(s) 455
XagI CCTNNNNNAGG 1 cut(s) 132
XapI RAATTY 2 cut(s) 411, 1067
XceI RCATGY 3 cut(s) 484, 516, 621
XcmI CCANNNNNNNNNTGG 2 cut(s) 198, 1332
XmiI GTMKAC 2 cut(s) 702, 805
XspI CTAG 5 cut(s) 194, 347, 476, 666, 1094
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.