MD05G1129800.v1.1

Lysine histidine transporter-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
25405677 .. 25408051
2375 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1129800.v1.1.491

Sequence Viewer

Length: 1467 bp
ATGGCAGCTGATCCCATCGGAGAAGTTATTGTTGAAATTACTACTTACACCACAAAAAGCTCAGCCTCAGCTCAAGTTTTTCCCGACACAACAAGCCCCTCAAACCTAGATATTACAAGTACAAATTGGGAAGGTAGTGAGCTCAATCCACAGGACGCGTGGCTACCCGTTACTGAGTCCAGGAATGGCAATACCTACTATGCTACCTTCCATTTACTCTGTTCAGGAATTGGAACTCAAGCCCTTTTACTACCTCTTGCATTCGCTACTCTTGGATGGGCATGGGGAATTATATGCTTCTTACTAGCATTTGTGTGGCAGATCTACACCAAGTGGCTTCTCGTACATCTACACGAATCTGAAAATGGATTTCGTAACAGTAGATACCTCCACCTTGCAGTAACAGCCTTCGGTAAAAAGTTAGGGATGATTCTAGCAATGTTCCCAGTTATCTATCAATCAAATGGTGCTTGTGCACAGCTGATAATCGTAGGAGGTGGAACCTTGAAGCTTTTCTTCAAAACTGTGTGTGAGGATGGAGCCACTTGCCATCCATTGACTGGTACCGAGTGCTTCTTGTTGTTTACATGCGTGGCTGTGGTTCTCGCCCAATGTCCCAACTTGAACTCCGTAGCTAGACTCTCCATGATCGGTGCCATCGCATCAGTTGTATATTGCACTACTGTTTGGACTCTTTCAGTTGGAAAAGGCAGGGACCATGACTACACATCATATGATCCACCAGCGATGGAGTCCACCATGGATATATTTGGTGGCAAACTGAATGCGGTTGGCATTATTTTTCTTACATTCAGAGGTCACAATGTAATTCTTGAGATACAGGGCACATTACCATCAAACCCCAAATACCCAATACATAAGCGAATGTGGAGAGGAGTGACTGTAGCTTGTGCACTCATAGCCATGTGTTTTCTTCCTCTGGCCATAGGTGGATTTTGGGCTTTCGGCAACAAGGTACCCACTTCCTATAGAGGAGTATTAATCTTGGTTTCACAATTCCATGGACATAAAAACACTTCAAAATTTGTACTTGGATCATTTTGCATGCTTGTGGTGATACACAGCTTAAGCACATTCCAAATCTTTGGCATGGTGGCTTTTGATAATTTGGAGTCAAAGTACACTATCAGGAAGAACAAGCCGTGTCCAAGGTGGCTTCGAGTAGCTTTACGCATTTTCTTCGGAGGAGTGGAATTCTTCATAGCAGTTGCTCTTCCATTCTTGGGAAGCCTGGCACCTCTAATCGGAGGGTTAACATTGCCTTTGGCATATGCTTACCCATGTTTCATGTGGATTTCAATCAAGAAACCAAAGCAAAAAGGAGCAGTGTGGTGGATTAACATGGGACTTGGATGCTTAGGCTTGGCTTTGAGTGTCATTTTAGTTGTTGCAGCAGCTTGGAATTTAGCTGACAAAGGTCTAAATGCCAACTTCTTTAAGCCTTAA

Protein Analysis

489

Amino Acids

53.46

Weight (kDa)

8.95

Isoelectric Point (pI)

30.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 62 - 471 1.9e-56 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 563, 976
AccB1I GGYRCC 4 cut(s) 563, 653, 976, 1255
AccB7I CCANNNNNTGG 1 cut(s) 560
AccII CGCG 1 cut(s) 158
AciI CCGC 1 cut(s) 788
AclWI GGATC 3 cut(s) 5, 731, 1063
AcoI YGGCCR 1 cut(s) 942
AcsI RAATTY 3 cut(s) 1043, 1214, 1423
AdeI CACNNNGTG 1 cut(s) 333
AfaI GTAC 6 cut(s) 121, 345, 565, 978, 1050, 1142
AfiI CCNNNNNNNGG 3 cut(s) 560, 1244, 1265
AflII CTTAAG 1 cut(s) 1087
AflIII ACRYGT 1 cut(s) 156
AgsI TTSAA 6 cut(s) 35, 508, 520, 625, 1041, 1320
AjnI CCWGG 2 cut(s) 179, 1251
Alw21I GWGCWC 3 cut(s) 144, 478, 916
Alw44I GTGCAC 2 cut(s) 474, 912
AlwI GGATC 3 cut(s) 5, 731, 1063
AoxI GGCC 1 cut(s) 942
ApaLI GTGCAC 2 cut(s) 474, 912
ApeKI GCWGC 3 cut(s) 5, 1412, 1415
ApoI RAATTY 3 cut(s) 1043, 1214, 1423
AseI ATTAAT 1 cut(s) 1001
Asp700I GAANNNNTTC 1 cut(s) 512
Asp718I GGTACC 2 cut(s) 563, 976
AspS9I GGNCC 1 cut(s) 715
AsuHPI GGTGA 1 cut(s) 1087
AvaII GGWCC 1 cut(s) 715
BaeGI GKGCMC 3 cut(s) 478, 848, 916
BalI TGGCCA 1 cut(s) 944
BanI GGYRCC 4 cut(s) 563, 653, 976, 1255
BanII GRGCYC 1 cut(s) 144
Bbv12I GWGCWC 3 cut(s) 144, 478, 916
BbvCI CCTCAGC 1 cut(s) 67
BbvI GCAGC 3 cut(s) 17, 1424, 1427
BccI CCATC 7 cut(s) 23, 270, 530, 558, 665, 742, 862
BceAI ACGGC 1 cut(s) 1147
BcgI CGANNNNNNTGC 2 cut(s) 1183, 1217
BciT130I CCWGG 2 cut(s) 181, 1253
BfaI CTAG 4 cut(s) 107, 305, 434, 636
BfmI CTRYAG 2 cut(s) 903, 988
BfrI CTTAAG 1 cut(s) 1087
BglII AGATCT 1 cut(s) 321
BisI GCNGC 3 cut(s) 6, 1413, 1416
BlpI GCTNAGC 1 cut(s) 61
BlsI GCNGC 3 cut(s) 7, 1414, 1417
Bme1390I CCNGG 2 cut(s) 181, 1253
Bme18I GGWCC 1 cut(s) 715
BmgT120I GGNCC 1 cut(s) 715
BmiI GGNNCC 7 cut(s) 502, 541, 565, 655, 716, 978, 1257
BmrFI CCNGG 2 cut(s) 181, 1253
BmrI ACTGGG 1 cut(s) 440
BmsI GCATC 2 cut(s) 671, 1364
BmuI ACTGGG 1 cut(s) 440
BoxI GACNNNNGTC 1 cut(s) 1437
Bpu10I CCTNAGC 2 cut(s) 67, 1378
Bpu1102I GCTNAGC 1 cut(s) 61
BpuEI CTTGAG 3 cut(s) 57, 222, 854
BsaBI GATNNNNATC 1 cut(s) 1319
BsaJI CCNNGG 3 cut(s) 759, 1021, 1169
BsaXI ACNNNNNCTCC 6 cut(s) 611, 641, 888, 918, 1124, 1154
Bsc4I CCNNNNNNNGG 3 cut(s) 560, 1244, 1265
Bse1I ACTGG 2 cut(s) 446, 565
Bse3DI GCAATG 2 cut(s) 444, 1277
Bse8I GATNNNNATC 1 cut(s) 1319
BseBI CCWGG 2 cut(s) 181, 1253
BseDI CCNNGG 3 cut(s) 759, 1021, 1169
BseGI GGATG 5 cut(s) 281, 432, 541, 550, 1379
BseJI GATNNNNATC 1 cut(s) 1319
BseLI CCNNNNNNNGG 3 cut(s) 560, 1244, 1265
BseMI GCAATG 2 cut(s) 444, 1277
BseMII CTCAG 3 cut(s) 75, 81, 165
BseNI ACTGG 2 cut(s) 446, 565
BseRI GAGGAG 3 cut(s) 909, 1008, 1221
BseSI GKGCMC 3 cut(s) 478, 848, 916
BseXI GCAGC 3 cut(s) 17, 1424, 1427
Bsh1236I CGCG 1 cut(s) 158
BshFI GGCC 1 cut(s) 944
BshNI GGYRCC 4 cut(s) 563, 653, 976, 1255
BsiHKAI GWGCWC 3 cut(s) 144, 478, 916
BslFI GGGAC 3 cut(s) 600, 728, 1380
BslI CCNNNNNNNGG 3 cut(s) 560, 1244, 1265
BsmFI GGGAC 3 cut(s) 600, 728, 1380
BsmI GAATGC 2 cut(s) 260, 790
BsnI GGCC 1 cut(s) 944
Bsp1286I GDGCHC 4 cut(s) 144, 478, 848, 916
Bsp143I GATC 5 cut(s) 10, 321, 648, 736, 1055
Bsp1720I GCTNAGC 1 cut(s) 61
Bsp19I CCATGG 2 cut(s) 759, 1021
BspACI CCGC 1 cut(s) 788
BspANI GGCC 1 cut(s) 944
BspCNI CTCAG 3 cut(s) 74, 80, 166
BspFNI CGCG 1 cut(s) 158
BspLI GGNNCC 7 cut(s) 502, 541, 565, 655, 716, 978, 1257
BspPI GGATC 3 cut(s) 5, 731, 1063
BspQI GCTCTTC 1 cut(s) 1239
BspT107I GGYRCC 4 cut(s) 563, 653, 976, 1255
BspTI CTTAAG 1 cut(s) 1087
BsrDI GCAATG 2 cut(s) 444, 1277
BsrI ACTGG 2 cut(s) 446, 565
BssECI CCNNGG 3 cut(s) 759, 1021, 1169
BssMI GATC 5 cut(s) 10, 321, 648, 736, 1055
BssT1I CCWWGG 3 cut(s) 759, 1021, 1169
Bst2UI CCWGG 2 cut(s) 181, 1253
Bst4CI ACNGT 4 cut(s) 380, 526, 685, 904
Bst6I CTCTTC 1 cut(s) 1239
BstAFI CTTAAG 1 cut(s) 1087
BstC8I GCNNGC 1 cut(s) 1067
BstDEI CTNAG 4 cut(s) 61, 67, 174, 1378
BstDSI CCRYGG 2 cut(s) 759, 1021
BstF5I GGATG 5 cut(s) 281, 432, 541, 550, 1379
BstFNI CGCG 1 cut(s) 158
BstKTI GATC 5 cut(s) 13, 324, 651, 739, 1058
BstMBI GATC 5 cut(s) 10, 321, 648, 736, 1055
BstMWI GCNNNNNNNGC 2 cut(s) 404, 920
BstNI CCWGG 2 cut(s) 181, 1253
BstNSI RCATGY 2 cut(s) 591, 1069
BstPAI GACNNNNGTC 1 cut(s) 1437
BstSCI CCNGG 2 cut(s) 179, 1251
BstSFI CTRYAG 2 cut(s) 903, 988
BstSLI GKGCMC 3 cut(s) 478, 848, 916
BstUI CGCG 1 cut(s) 158
BstV1I GCAGC 3 cut(s) 17, 1424, 1427
BstX2I RGATCY 1 cut(s) 321
BstXI CCANNNNNNTGG 1 cut(s) 1106
BstYI RGATCY 1 cut(s) 321
BsuRI GGCC 1 cut(s) 944
BtgI CCRYGG 2 cut(s) 759, 1021
BtgZI GCGATG 2 cut(s) 643, 761
BtsCI GGATG 5 cut(s) 281, 432, 541, 550, 1379
BtsI GCAGTG 1 cut(s) 1353
BtsIMutI CAGTG 1 cut(s) 1353
Cac8I GCNNGC 1 cut(s) 1067
Cfr13I GGNCC 1 cut(s) 715
CseI GACGC 1 cut(s) 164
Csp6I GTAC 6 cut(s) 120, 344, 564, 977, 1049, 1141
CviQI GTAC 6 cut(s) 120, 344, 564, 977, 1049, 1141
DdeI CTNAG 4 cut(s) 61, 67, 174, 1378
DpnI GATC 5 cut(s) 12, 323, 650, 738, 1057
DpnII GATC 5 cut(s) 10, 321, 648, 736, 1055
DraIII CACNNNGTG 1 cut(s) 333
EaeI YGGCCR 1 cut(s) 942
Eam1104I CTCTTC 1 cut(s) 1239
EarI CTCTTC 1 cut(s) 1239
Ecl136II GAGCTC 1 cut(s) 142
Eco130I CCWWGG 3 cut(s) 759, 1021, 1169
Eco24I GRGCYC 1 cut(s) 144
Eco47I GGWCC 1 cut(s) 715
Eco53kI GAGCTC 1 cut(s) 142
EcoICRI GAGCTC 1 cut(s) 142
EcoRI GAATTC 1 cut(s) 1214
EcoRII CCWGG 2 cut(s) 179, 1251
EcoT14I CCWWGG 3 cut(s) 759, 1021, 1169
EcoT38I GRGCYC 1 cut(s) 144
ErhI CCWWGG 3 cut(s) 759, 1021, 1169
FalI AAGNNNNNCTT 2 cut(s) 500, 532
FaqI GGGAC 3 cut(s) 600, 728, 1380
FauNDI CATATG 2 cut(s) 733, 1291
Fnu4HI GCNGC 3 cut(s) 6, 1413, 1416
FokI GGATG 5 cut(s) 288, 439, 537, 548, 1386
FriOI GRGCYC 1 cut(s) 144
Fsp4HI GCNGC 3 cut(s) 6, 1413, 1416
FspBI CTAG 4 cut(s) 107, 305, 434, 636
GluI GCNGC 3 cut(s) 6, 1413, 1416
HaeIII GGCC 1 cut(s) 944
HgaI GACGC 1 cut(s) 164
HincII GTYRAC 1 cut(s) 1275
HindII GTYRAC 1 cut(s) 1275
HindIII AAGCTT 1 cut(s) 509
HinfI GANTC 7 cut(s) 176, 356, 430, 639, 691, 752, 1133
HpaI GTTAAC 1 cut(s) 1275
HphI GGTGA 1 cut(s) 1087
Hpy166II GTNNAC 6 cut(s) 476, 585, 756, 914, 1143, 1275
Hpy188I TCNGA 5 cut(s) 20, 361, 815, 1205, 1268
Hpy188III TCNNGA 5 cut(s) 83, 225, 833, 1150, 1324
Hpy8I GTNNAC 6 cut(s) 476, 585, 756, 914, 1143, 1275
HpyAV CCTTC 3 cut(s) 125, 217, 418
HpyCH4III ACNGT 4 cut(s) 380, 526, 685, 904
HpyCH4V TGCA 7 cut(s) 260, 398, 476, 678, 914, 1065, 1412
HpyF10VI GCNNNNNNNGC 2 cut(s) 404, 920
HpyF3I CTNAG 4 cut(s) 61, 67, 174, 1378
KpnI GGTACC 2 cut(s) 567, 980
KspAI GTTAAC 1 cut(s) 1275
Kzo9I GATC 5 cut(s) 10, 321, 648, 736, 1055
LguI GCTCTTC 1 cut(s) 1239
LmnI GCTCC 2 cut(s) 539, 1343
Lsp1109I GCAGC 3 cut(s) 17, 1424, 1427
LweI GCATC 2 cut(s) 671, 1364
MaeI CTAG 4 cut(s) 107, 305, 434, 636
MaeIII GTNAC 5 cut(s) 169, 374, 400, 818, 898
MalI GATC 5 cut(s) 12, 323, 650, 738, 1057
MboI GATC 5 cut(s) 10, 321, 648, 736, 1055
MboII GAAGA 6 cut(s) 508, 926, 1165, 1192, 1210, 1226
MflI RGATCY 1 cut(s) 321
MhlI GDGCHC 4 cut(s) 144, 478, 848, 916
MlsI TGGCCA 1 cut(s) 944
MluI ACGCGT 1 cut(s) 156
MluNI TGGCCA 1 cut(s) 944
MlyI GAGTC 5 cut(s) 185, 633, 685, 761, 1142
MmeI TCCRAC 1 cut(s) 682
Mox20I TGGCCA 1 cut(s) 944
MroXI GAANNNNTTC 1 cut(s) 512
MscI TGGCCA 1 cut(s) 944
MseI TTAA 6 cut(s) 1001, 1088, 1274, 1359, 1458, 1465
MslI CAYNNNNRTG 3 cut(s) 313, 923, 1070
Msp20I TGGCCA 1 cut(s) 944
MspA1I CMGCKG 2 cut(s) 8, 481
MspCI CTTAAG 1 cut(s) 1087
MspR9I CCNGG 2 cut(s) 181, 1253
Mva1269I GAATGC 2 cut(s) 260, 790
MvaI CCWGG 2 cut(s) 181, 1253
MvnI CGCG 1 cut(s) 158
MwoI GCNNNNNNNGC 2 cut(s) 404, 920
NcoI CCATGG 2 cut(s) 759, 1021
NdeI CATATG 2 cut(s) 733, 1291
NdeII GATC 5 cut(s) 10, 321, 648, 736, 1055
NlaIV GGNNCC 7 cut(s) 502, 541, 565, 655, 716, 978, 1257
NmuCI GTSAC 2 cut(s) 818, 898
NspI RCATGY 2 cut(s) 591, 1069
PaeI GCATGC 1 cut(s) 1069
PciSI GCTCTTC 1 cut(s) 1239
PctI GAATGC 2 cut(s) 260, 790
PdmI GAANNNNTTC 1 cut(s) 512
PfeI GAWTC 2 cut(s) 356, 430
PflMI CCANNNNNTGG 1 cut(s) 560
PfoI TCCNGGA 1 cut(s) 179
PkrI GCNGC 3 cut(s) 7, 1414, 1417
PleI GAGTC 5 cut(s) 184, 633, 685, 760, 1141
PpsI GAGTC 5 cut(s) 184, 633, 685, 760, 1141
PshAI GACNNNNGTC 1 cut(s) 1437
PshBI ATTAAT 1 cut(s) 1001
Psp124BI GAGCTC 1 cut(s) 144
Psp6I CCWGG 2 cut(s) 179, 1251
PspGI CCWGG 2 cut(s) 179, 1251
PspN4I GGNNCC 7 cut(s) 502, 541, 565, 655, 716, 978, 1257
PspPI GGNCC 1 cut(s) 715
PsuI RGATCY 1 cut(s) 321
PvuII CAGCTG 2 cut(s) 8, 481
RsaI GTAC 6 cut(s) 121, 345, 565, 978, 1050, 1142
RsaNI GTAC 6 cut(s) 120, 344, 564, 977, 1049, 1141
RseI CAYNNNNRTG 3 cut(s) 313, 923, 1070
SacI GAGCTC 1 cut(s) 144
SapI GCTCTTC 1 cut(s) 1239
SaqAI TTAA 6 cut(s) 1001, 1088, 1274, 1359, 1458, 1465
SatI GCNGC 3 cut(s) 6, 1413, 1416
Sau3AI GATC 5 cut(s) 10, 321, 648, 736, 1055
Sau96I GGNCC 1 cut(s) 715
SchI GAGTC 5 cut(s) 185, 633, 685, 761, 1142
ScrFI CCNGG 2 cut(s) 181, 1253
SduI GDGCHC 4 cut(s) 144, 478, 848, 916
SfaNI GCATC 2 cut(s) 671, 1364
SfcI CTRYAG 2 cut(s) 903, 988
SinI GGWCC 1 cut(s) 715
SmiMI CAYNNNNRTG 3 cut(s) 313, 923, 1070
SmlI CTYRAG 4 cut(s) 72, 237, 833, 1087
SmoI CTYRAG 4 cut(s) 72, 237, 833, 1087
SphI GCATGC 1 cut(s) 1069
SsiI CCGC 1 cut(s) 788
SspMI CTAG 4 cut(s) 107, 305, 434, 636
SstI GAGCTC 1 cut(s) 144
StyD4I CCNGG 2 cut(s) 179, 1251
StyI CCWWGG 3 cut(s) 759, 1021, 1169
TaaI ACNGT 4 cut(s) 380, 526, 685, 904
TaqI TCGA 1 cut(s) 1180
TatI WGTACW 3 cut(s) 119, 1048, 1140
TfiI GAWTC 2 cut(s) 356, 430
Tru1I TTAA 6 cut(s) 1001, 1088, 1274, 1359, 1458, 1465
Tru9I TTAA 6 cut(s) 1001, 1088, 1274, 1359, 1458, 1465
TscAI CASTG 1 cut(s) 1353
TseFI GTSAC 2 cut(s) 818, 898
TseI GCWGC 3 cut(s) 5, 1412, 1415
Tsp45I GTSAC 2 cut(s) 818, 898
TspDTI ATGAA 2 cut(s) 1210, 1297
TspGWI ACGGA 1 cut(s) 619
TspRI CASTG 1 cut(s) 1353
Van91I CCANNNNNTGG 1 cut(s) 560
Vha464I CTTAAG 1 cut(s) 1087
VneI GTGCAC 2 cut(s) 474, 912
VpaK11BI GGWCC 1 cut(s) 715
VspI ATTAAT 1 cut(s) 1001
XapI RAATTY 3 cut(s) 1043, 1214, 1423
XceI RCATGY 2 cut(s) 591, 1069
XcmI CCANNNNNNNNNTGG 3 cut(s) 156, 557, 1308
XmnI GAANNNNTTC 1 cut(s) 512
XspI CTAG 4 cut(s) 107, 305, 434, 636
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.