Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0000861

Physical Location & Seq

Genomic Coordinates Reverse (-)

17670385 .. 17675023

Gene Structure 4639 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0127100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1710 bp

ATGCAGCTCTTCTGTTGGAATGCCTTCACAGGACGTTTGGATGGTATGTATTTGCTGCTGGCACAAGTTGCGGTACATCATGCTCAAGGCATTCCATTAGCTTTGGTGGTTTTAGGTTCATGTCTGTATGGTGAAAGTTGGTATGATTGGACAGATGTATTAGATGATTTAAAAAGAGTAGTTGATCGTAAACAAGTTACTCAAGAAATTCTCAAAATATGTTATAATGCATTAGAAGATTTGGTGAAAGAAGTTTTCCTTCAAATTGCATGTTCTTTTGATGGACAAAAACAGATAAATCTGATGAAGGAACTAGCACATTTTGTCCCTAATCTTATGCATGGTATCCAAGTTCTGACAGAGAAGGCCTTCATAAATATTGGAGCAAGTCATGTACCCATCACGCATGAATTGCTAAAAGAAATGGCTACAGAGTTAGTCAGACAAAAGTCTGCAAATAAGCTTTGGGATAGCAAATTTTGGATCCTCAGGGATTTTTGCGTTTATCTTCCGAAATACTCTGCAATACGTATAGCTAAAGACATCATGAAGAAGTGGTCTAAACCACATGAGATACCATTCAGTACTACTGAGTTGGCTGAATTCTGGTCTAAAATCAGTATGCATGGAAGTTATGTCACGACGAGTGGAGGGATTCAAGGTATTCTGAAATATTGCATCACGATTTTCAGAAACCTGACTTCTATAAATTTTGAAGTGGTTCGACTGTCAAATGGATTTCAAGGGGTTTCGACTTTAATCTGGTGCGCCCTTAAAAAGCTGTGGTGTCCACCTTGTAATGCCACCCATGATGACGTTTGTATGAAGCTAATCCATGCAGAAAACCTGAACTGTGAACTTTCTGATAACTTTTATGAGGCCTGTAACAGCCATGCCATTACATATGTTCCACTTTACGACACCCTTGTGTACAGAAGAAGATTCATATTTTTTGTTTCTCCCGTGGCCCATATATATGACCAAATAATCGAGAGCTATTGCATCTACAAGGGATCTTCAATAGGCTTCTGGCGAGGCGATGTCAGGTTTTTACTGGATGACCTTCAGGAGCTAAAGCCTACTATGTTTTGTGGGGTTCCTCGAGTTTATGACTGTATATACACTGGTATTGCTAGTAAAGTTTCATCTGGTGGTGTGCTGAGGAAGACCCTTTTCCAGTATGCATATAACTACAAGTTGGCGAATCTGGAGAAGGGTCTACCACAAGAAAAAGCGGCACCTCTCTTGGACAAGCTTGTGTTTAACAAGATTCACAATCGACAAGATCTCACTGAAGAAGTTTATATTGATGGGTGGTTCCATACAGGTGATATTGGAGAATGGCAGCCTAATGGAGCAATGAAAGTTATAGACAGGAAAAATAACATATTTAAACTGTCTCAAGGTGAATACGTTGCTGTGGAAAGCATTGAAAGCAAATACTTGCAATGCCCCCTTATCACATCGACGGATATCTTAACATCTAAACTTCCATCTTGTCGGCAGATTTGGGTTTATGGGAACAGCTTCGAAAAGGCCTTGGAGGACTGGGCAGCTGAGCATCATCTGACTGATGACTACAAATCATTGTGTCAAAACCTGAAAGGCAAATACATTTTGGATGAGCTCAATAGTACGGGTCAGAAACAACAACTTCGAGGGTTTGAGTTGTTAAAAGCAGTTCATTTGGAACCAAACCCCTTTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0008150 GO:0008509 GO:0008514 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0022857 GO:0034220 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0098656 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Aa_trans

Protein Analysis

569

Amino Acids

65.32

Weight (kDa)

6.78

Isoelectric Point (pI)

36.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_ROQ1	PF23282	83 - 151	1.8e-06	Disease resistance protein Roq1-like, winged-helix domain
AMP-binding	PF00501	312 - 381	3e-07	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000861)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35180 AT4G35180
fragaria_vesca	FvH4_2g16040 FvH4_2g16050 FvH4_2g16052 FvH4_2g16052 FvH4_2g16052 FvH4_2g16053 FvH4_2g16053
malus_domestica	MD05G1129500.v1.1 MD05G1129600.v1.1 MD05G1129800.v1.1 MD10G1132700.v1.1
prunus_persica	Prupe.8G173300_v2.0.a1 Prupe.8G173400_v2.0.a1 Prupe.8G173500_v2.0.a1
pyrus_communis	pycom05g12580 pycom05g12590 pycom10g11390 pycom10g11400
rosa_chinensis	RchiOBHm_Chr2g0160371 RchiOBHm_Chr6g0279621 RchiOBHm_Chr6g0279631 RchiOBHm_Chr6g0279671 RchiOBHm_Chr6g0279681 RchiOBHm_Chr6g0279691
rosa_laevigata	RLG00000013127 RLG00000013129 RLG00000013130 RLG00000013132
rosa_multiflora	Rmu_sc0000079.1_g000070 Rmu_sc0000685.1_g000010 Rmu_sc0001225.1_g000006 Rmu_sc0001719.1_g000006 Rmu_sc0003865.1_g000001 Rmu_sc0004010.1_g000009 Rmu_sc0004010.1_g000011
rosa_roxburghii	Rroxscaffold_7G00188730 Rroxscaffold_7G00188750 Rroxscaffold_7G00188760 Rroxscaffold_7G00188780
rosa_rugosa	Rorug06G0126500 Rorug06G0126900 Rorug06G0127000 Rorug06G0127100 Rorug06G0127200.1 Rorug06G0127300 Rorug06G0127700
rosa_samantha	Rh2BG398100 Rh6AG235000 Rh6AG235200 Rh6AG235400 Rh6BG239500 Rh6BG239600 Rh6BG239900 Rh6CG241300 Rh6CG241500 Rh6CG241600 Rh6CG241800 Rh6DG232800 Rh6DG233100 Rh6DG233200 Rh6DG233400
rosa_wichuraiana	Rw6G020510 Rw6G020520 Rw6G020530 Rw7G027130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	225
AccB1I	GGYRCC	1 cut(s)	1237
AccI	GTMKAC	1 cut(s)	1219
AciI	CCGC	2 cut(s)	71, 1235
AclWI	GGATC	3 cut(s)	478, 491, 1021
AcsI	RAATTY	4 cut(s)	207, 476, 602, 709
AcuI	CTGAAG	2 cut(s)	1049, 1314
AfaI	GTAC	5 cut(s)	75, 396, 586, 932, 1636
AgsI	TTSAA	6 cut(s)	263, 659, 716, 743, 1020, 1433
AleI	CACNNNNGTG	1 cut(s)	926
Alw21I	GWGCWC	1 cut(s)	1629
Alw26I	GTCTC	1 cut(s)	1404
AlwI	GGATC	3 cut(s)	478, 491, 1021
Ama87I	CYCGRG	1 cut(s)	1101
AoxI	GGCC	4 cut(s)	366, 879, 966, 1536
ApeKI	GCWGC	4 cut(s)	4, 55, 1345, 1553
ApoI	RAATTY	4 cut(s)	207, 476, 602, 709
Asp700I	GAANNNNTTC	4 cut(s)	23, 368, 720, 1526
AspLEI	GCGC	1 cut(s)	770
AspS9I	GGNCC	1 cut(s)	967
AsuHPI	GGTGA	4 cut(s)	143, 256, 1340, 1418
AsuII	TTCGAA	1 cut(s)	1530
AvaI	CYCGRG	1 cut(s)	1101
AxyI	CCTNAGG	1 cut(s)	488
BamHI	GGATCC	1 cut(s)	483
BanI	GGYRCC	1 cut(s)	1237
BanII	GRGCYC	1 cut(s)	1629
BbsI	GAAGAC	1 cut(s)	1172
Bbv12I	GWGCWC	1 cut(s)	1629
BbvCI	CCTCAGC	1 cut(s)	1160
BbvI	GCAGC	4 cut(s)	16, 42, 1357, 1565
BccI	CCATC	5 cut(s)	35, 275, 407, 1304, 1501
BciVI	GTATCC	1 cut(s)	356
BcoDI	GTCTC	1 cut(s)	1404
BfaI	CTAG	2 cut(s)	314, 1134
BfmI	CTRYAG	1 cut(s)	429
BfuI	GTATCC	1 cut(s)	356
BglII	AGATCT	1 cut(s)	1285
BisI	GCNGC	5 cut(s)	5, 56, 1236, 1346, 1554
BlpI	GCTNAGC	1 cut(s)	1557
BlsI	GCNGC	5 cut(s)	6, 57, 1237, 1347, 1555
BmcAI	AGTACT	1 cut(s)	586
BmeT110I	CYCGRG	1 cut(s)	1101
BmgT120I	GGNCC	1 cut(s)	967
BmiI	GGNNCC	5 cut(s)	485, 1098, 1239, 1319, 1692
BmrI	ACTGGG	1 cut(s)	1558
BmsI	GCATC	3 cut(s)	687, 1011, 1570
BmuI	ACTGGG	1 cut(s)	1558
BoxI	GACNNNNGTC	1 cut(s)	448
BpiI	GAAGAC	1 cut(s)	1172
BpmI	CTGGAG	1 cut(s)	1229
Bpu10I	CCTNAGC	1 cut(s)	1160
Bpu1102I	GCTNAGC	1 cut(s)	1557
Bpu14I	TTCGAA	1 cut(s)	1530
BpuEI	CTTGAG	3 cut(s)	69, 186, 1386
BsaAI	YACGTR	1 cut(s)	530
BsaJI	CCNNGG	2 cut(s)	963, 1539
Bse1I	ACTGG	4 cut(s)	1059, 1129, 1177, 1553
Bse21I	CCTNAGG	1 cut(s)	488
Bse3DI	GCAATG	2 cut(s)	1365, 1454
BseDI	CCNNGG	2 cut(s)	963, 1539
BseGI	GGATG	3 cut(s)	46, 1063, 1627
BseMI	GCAATG	2 cut(s)	1365, 1454
BseMII	CTCAG	4 cut(s)	502, 582, 1151, 1548
BseNI	ACTGG	4 cut(s)	1059, 1129, 1177, 1553
BseXI	GCAGC	4 cut(s)	16, 42, 1357, 1565
BshFI	GGCC	4 cut(s)	368, 881, 968, 1538
BshNI	GGYRCC	1 cut(s)	1237
BsiHKAI	GWGCWC	1 cut(s)	1629
BsiHKCI	CYCGRG	1 cut(s)	1101
BslFI	GGGAC	1 cut(s)	311
BsmAI	GTCTC	1 cut(s)	1404
BsmFI	GGGAC	1 cut(s)	311
BsmI	GAATGC	2 cut(s)	25, 90
BsnI	GGCC	4 cut(s)	368, 881, 968, 1538
BsoBI	CYCGRG	1 cut(s)	1101
Bsp119I	TTCGAA	1 cut(s)	1530
Bsp1286I	GDGCHC	1 cut(s)	1629
Bsp1407I	TGTACA	1 cut(s)	930
Bsp143I	GATC	4 cut(s)	184, 483, 1013, 1285
Bsp1720I	GCTNAGC	1 cut(s)	1557
BspACI	CCGC	2 cut(s)	71, 1235
BspANI	GGCC	4 cut(s)	368, 881, 968, 1538
BspCNI	CTCAG	4 cut(s)	501, 583, 1152, 1549
BspHI	TCATGA	1 cut(s)	546
BspLI	GGNNCC	5 cut(s)	485, 1098, 1239, 1319, 1692
BspPI	GGATC	3 cut(s)	478, 491, 1021
BspQI	GCTCTTC	1 cut(s)	14
BspT104I	TTCGAA	1 cut(s)	1530
BspT107I	GGYRCC	1 cut(s)	1237
BsrDI	GCAATG	2 cut(s)	1365, 1454
BsrGI	TGTACA	1 cut(s)	930
BsrI	ACTGG	4 cut(s)	1059, 1129, 1177, 1553
BssECI	CCNNGG	2 cut(s)	963, 1539
BssMI	GATC	4 cut(s)	184, 483, 1013, 1285
BssT1I	CCWWGG	1 cut(s)	1539
Bst4CI	ACNGT	4 cut(s)	729, 854, 1115, 1398
Bst6I	CTCTTC	1 cut(s)	14
BstAPI	GCANNNNNTGC	2 cut(s)	68, 412
BstAUI	TGTACA	1 cut(s)	930
BstBAI	YACGTR	1 cut(s)	530
BstBI	TTCGAA	1 cut(s)	1530
BstC8I	GCNNGC	1 cut(s)	60
BstDEI	CTNAG	4 cut(s)	488, 591, 1160, 1557
BstDSI	CCRYGG	1 cut(s)	963
BstF5I	GGATG	3 cut(s)	46, 1063, 1627
BstHHI	GCGC	1 cut(s)	770
BstKTI	GATC	4 cut(s)	187, 486, 1016, 1288
BstMAI	GTCTC	1 cut(s)	1404
BstMBI	GATC	4 cut(s)	184, 483, 1013, 1285
BstMWI	GCNNNNNNNGC	3 cut(s)	68, 412, 1434
BstNSI	RCATGY	1 cut(s)	273
BstPAI	GACNNNNGTC	1 cut(s)	448
BstSFI	CTRYAG	1 cut(s)	429
BstSNI	TACGTA	1 cut(s)	530
BstV1I	GCAGC	4 cut(s)	16, 42, 1357, 1565
BstV2I	GAAGAC	1 cut(s)	1172
BstX2I	RGATCY	3 cut(s)	483, 1013, 1285
BstYI	RGATCY	3 cut(s)	483, 1013, 1285
Bsu36I	CCTNAGG	1 cut(s)	488
BsuI	GTATCC	1 cut(s)	356
BsuRI	GGCC	4 cut(s)	368, 881, 968, 1538
BtgI	CCRYGG	1 cut(s)	963
BtgZI	GCGATG	1 cut(s)	1053
BtsCI	GGATG	3 cut(s)	46, 1063, 1627
BtsIMutI	CAGTG	2 cut(s)	1122, 1290
Cac8I	GCNNGC	1 cut(s)	60
CciI	TCATGA	1 cut(s)	546
CfoI	GCGC	1 cut(s)	770
Cfr13I	GGNCC	1 cut(s)	967
Csp6I	GTAC	5 cut(s)	74, 395, 585, 931, 1635
CviQI	GTAC	5 cut(s)	74, 395, 585, 931, 1635
DdeI	CTNAG	4 cut(s)	488, 591, 1160, 1557
DpnI	GATC	4 cut(s)	186, 485, 1015, 1287
DpnII	GATC	4 cut(s)	184, 483, 1013, 1285
DraI	TTTAAA	2 cut(s)	171, 1393
Eam1104I	CTCTTC	1 cut(s)	14
EarI	CTCTTC	1 cut(s)	14
Ecl136II	GAGCTC	1 cut(s)	1627
Eco105I	TACGTA	1 cut(s)	530
Eco130I	CCWWGG	1 cut(s)	1539
Eco147I	AGGCCT	3 cut(s)	368, 881, 1538
Eco24I	GRGCYC	1 cut(s)	1629
Eco32I	GATATC	1 cut(s)	1474
Eco53kI	GAGCTC	1 cut(s)	1627
Eco57I	CTGAAG	2 cut(s)	1049, 1314
Eco81I	CCTNAGG	1 cut(s)	488
Eco88I	CYCGRG	1 cut(s)	1101
EcoICRI	GAGCTC	1 cut(s)	1627
EcoRI	GAATTC	1 cut(s)	602
EcoRV	GATATC	1 cut(s)	1474
EcoT14I	CCWWGG	1 cut(s)	1539
EcoT22I	ATGCAT	4 cut(s)	232, 342, 627, 1186
EcoT38I	GRGCYC	1 cut(s)	1629
ErhI	CCWWGG	1 cut(s)	1539
FalI	AAGNNNNNCTT	2 cut(s)	243, 275
FaqI	GGGAC	1 cut(s)	311
FauNDI	CATATG	1 cut(s)	904
FblI	GTMKAC	1 cut(s)	1219
Fnu4HI	GCNGC	5 cut(s)	5, 56, 1236, 1346, 1554
FokI	GGATG	3 cut(s)	53, 1070, 1634
FriOI	GRGCYC	1 cut(s)	1629
Fsp4HI	GCNGC	5 cut(s)	5, 56, 1236, 1346, 1554
FspBI	CTAG	2 cut(s)	314, 1134
GlaI	GCGC	1 cut(s)	769
GluI	GCNGC	5 cut(s)	5, 56, 1236, 1346, 1554
GsuI	CTGGAG	1 cut(s)	1229
HaeIII	GGCC	4 cut(s)	368, 881, 968, 1538
HhaI	GCGC	1 cut(s)	770
Hin6I	GCGC	1 cut(s)	768
HinP1I	GCGC	1 cut(s)	768
HindIII	AAGCTT	2 cut(s)	461, 1253
HinfI	GANTC	4 cut(s)	655, 942, 1204, 1270
HphI	GGTGA	4 cut(s)	143, 256, 1340, 1418
Hpy166II	GTNNAC	5 cut(s)	191, 791, 857, 931, 1220
Hpy188I	TCNGA	9 cut(s)	303, 357, 443, 513, 669, 692, 865, 1569, 1644
Hpy188III	TCNNGA	7 cut(s)	203, 547, 640, 682, 991, 1067, 1208
Hpy8I	GTNNAC	5 cut(s)	191, 791, 857, 931, 1220
Hpy99I	CGWCG	2 cut(s)	646, 1471
HpyAV	CCTTC	7 cut(s)	34, 269, 301, 358, 379, 1073, 1207
HpyCH4III	ACNGT	4 cut(s)	729, 854, 1115, 1398
HpyCH4IV	ACGT	4 cut(s)	34, 529, 816, 1413
HpyF10VI	GCNNNNNNNGC	3 cut(s)	68, 412, 1434
HpyF3I	CTNAG	4 cut(s)	488, 591, 1160, 1557
HpySE526I	ACGT	4 cut(s)	34, 529, 816, 1413
HspAI	GCGC	1 cut(s)	768
Kzo9I	GATC	4 cut(s)	184, 483, 1013, 1285
LguI	GCTCTTC	1 cut(s)	14
LmnI	GCTCC	3 cut(s)	383, 1069, 1355
Lsp1109I	GCAGC	4 cut(s)	16, 42, 1357, 1565
LweI	GCATC	3 cut(s)	687, 1011, 1570
MaeI	CTAG	2 cut(s)	314, 1134
MaeII	ACGT	4 cut(s)	34, 529, 816, 1413
MaeIII	GTNAC	3 cut(s)	196, 637, 884
MalI	GATC	4 cut(s)	186, 485, 1015, 1287
MboI	GATC	4 cut(s)	184, 483, 1013, 1285
MboII	GAAGA	8 cut(s)	248, 500, 562, 948, 951, 1008, 1177, 1307
MflI	RGATCY	3 cut(s)	483, 1013, 1285
MhlI	GDGCHC	1 cut(s)	1629
MluCI	AATT	6 cut(s)	207, 264, 410, 476, 602, 709
MnlI	CCTC	9 cut(s)	497, 644, 871, 1028, 1110, 1155, 1251, 1537, 1652
Mph1103I	ATGCAT	4 cut(s)	232, 342, 627, 1186
MroXI	GAANNNNTTC	4 cut(s)	23, 368, 720, 1526
MseI	TTAA	7 cut(s)	170, 758, 774, 1263, 1392, 1478, 1673
MslI	CAYNNNNRTG	3 cut(s)	926, 975, 1326
MspA1I	CMGCKG	1 cut(s)	1556
Mva1269I	GAATGC	2 cut(s)	25, 90
MwoI	GCNNNNNNNGC	3 cut(s)	68, 412, 1434
NdeI	CATATG	1 cut(s)	904
NdeII	GATC	4 cut(s)	184, 483, 1013, 1285
NlaIV	GGNNCC	5 cut(s)	485, 1098, 1239, 1319, 1692
NmuCI	GTSAC	1 cut(s)	637
NsiI	ATGCAT	4 cut(s)	232, 342, 627, 1186
NspI	RCATGY	1 cut(s)	273
NspV	TTCGAA	1 cut(s)	1530
OliI	CACNNNNGTG	1 cut(s)	926
PaeR7I	CTCGAG	1 cut(s)	1101
PagI	TCATGA	1 cut(s)	546
PceI	AGGCCT	3 cut(s)	368, 881, 1538
PciSI	GCTCTTC	1 cut(s)	14
PctI	GAATGC	2 cut(s)	25, 90
PdmI	GAANNNNTTC	4 cut(s)	23, 368, 720, 1526
PfeI	GAWTC	4 cut(s)	655, 942, 1204, 1270
PkrI	GCNGC	5 cut(s)	6, 57, 1237, 1347, 1555
Ppu21I	YACGTR	1 cut(s)	530
PshAI	GACNNNNGTC	1 cut(s)	448
PsiI	TTATAA	1 cut(s)	225
Psp124BI	GAGCTC	1 cut(s)	1629
PspN4I	GGNNCC	5 cut(s)	485, 1098, 1239, 1319, 1692
PspPI	GGNCC	1 cut(s)	967
PspXI	VCTCGAGB	1 cut(s)	1101
PsuI	RGATCY	3 cut(s)	483, 1013, 1285
PvuII	CAGCTG	1 cut(s)	1556
RsaI	GTAC	5 cut(s)	75, 396, 586, 932, 1636
RsaNI	GTAC	5 cut(s)	74, 395, 585, 931, 1635
RseI	CAYNNNNRTG	3 cut(s)	926, 975, 1326
SacI	GAGCTC	1 cut(s)	1629
SapI	GCTCTTC	1 cut(s)	14
SaqAI	TTAA	7 cut(s)	170, 758, 774, 1263, 1392, 1478, 1673
SatI	GCNGC	5 cut(s)	5, 56, 1236, 1346, 1554
Sau3AI	GATC	4 cut(s)	184, 483, 1013, 1285
Sau96I	GGNCC	1 cut(s)	967
ScaI	AGTACT	1 cut(s)	586
SduI	GDGCHC	1 cut(s)	1629
SfaNI	GCATC	3 cut(s)	687, 1011, 1570
SfcI	CTRYAG	1 cut(s)	429
Sfr274I	CTCGAG	1 cut(s)	1101
SfuI	TTCGAA	1 cut(s)	1530
SlaI	CTCGAG	1 cut(s)	1101
SmiMI	CAYNNNNRTG	3 cut(s)	926, 975, 1326
SmlI	CTYRAG	4 cut(s)	84, 201, 1101, 1401
SmoI	CTYRAG	4 cut(s)	84, 201, 1101, 1401
SnaBI	TACGTA	1 cut(s)	530
Sse9I	AATT	6 cut(s)	207, 264, 410, 476, 602, 709
SseBI	AGGCCT	3 cut(s)	368, 881, 1538
SsiI	CCGC	2 cut(s)	71, 1235
SspI	AATATT	2 cut(s)	379, 674
SspMI	CTAG	2 cut(s)	314, 1134
SstI	GAGCTC	1 cut(s)	1629
StuI	AGGCCT	3 cut(s)	368, 881, 1538
StyI	CCWWGG	1 cut(s)	1539
TaaI	ACNGT	4 cut(s)	729, 854, 1115, 1398
TaiI	ACGT	4 cut(s)	37, 532, 819, 1416
TaqI	TCGA	8 cut(s)	724, 752, 990, 1102, 1279, 1466, 1530, 1657
TasI	AATT	6 cut(s)	207, 264, 410, 476, 602, 709
TatI	WGTACW	2 cut(s)	584, 930
TauI	GCSGC	1 cut(s)	1238
TfiI	GAWTC	4 cut(s)	655, 942, 1204, 1270
Tru1I	TTAA	7 cut(s)	170, 758, 774, 1263, 1392, 1478, 1673
Tru9I	TTAA	7 cut(s)	170, 758, 774, 1263, 1392, 1478, 1673
TscAI	CASTG	2 cut(s)	1129, 1297
TseFI	GTSAC	1 cut(s)	637
TseI	GCWGC	4 cut(s)	4, 55, 1345, 1553
Tsp45I	GTSAC	1 cut(s)	637
TspGWI	ACGGA	1 cut(s)	1484
TspRI	CASTG	2 cut(s)	1129, 1297
XapI	RAATTY	4 cut(s)	207, 476, 602, 709
XceI	RCATGY	1 cut(s)	273
XhoI	CTCGAG	1 cut(s)	1101
XmiI	GTMKAC	1 cut(s)	1219
XmnI	GAANNNNTTC	4 cut(s)	23, 368, 720, 1526
XspI	CTAG	2 cut(s)	314, 1134
ZrmI	AGTACT	1 cut(s)	586
Zsp2I	ATGCAT	4 cut(s)	232, 342, 627, 1186

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.