Rorug06G0126500

Lysine histidine transporter-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
17587495 .. 17587692
198 bp
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UTR
Exon/CDS
Intron
Rorug06G0126500.1

Sequence Viewer

Length: 198 bp
ATGTGGTTAAATGAACGTCTCGTAGCTCGTCAATCTCATATGCATATTTCTCATGGGGAGGACAATGTCCCTTCTGATATTTTGGCTAGATATGGTGCACTACATGCAAGTAAAACATGGTGGGATTCCATTCCTCCCTTTCTTGTTTCATCCATTGGTTATGATTTCTCCGCTAGAGTGGCATGTCGGTTCTCTTAG

Protein Analysis

65

Amino Acids

7.43

Weight (kDa)

6.89

Isoelectric Point (pI)

59.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 171
AluBI AGCT 1 cut(s) 26
AluI AGCT 1 cut(s) 26
Alw21I GWGCWC 1 cut(s) 100
Alw26I GTCTC 1 cut(s) 23
Alw44I GTGCAC 1 cut(s) 96
ApaLI GTGCAC 1 cut(s) 96
BaeGI GKGCMC 1 cut(s) 100
Bbv12I GWGCWC 1 cut(s) 100
BcoDI GTCTC 1 cut(s) 23
BfaI CTAG 2 cut(s) 87, 174
BseGI GGATG 1 cut(s) 149
BseSI GKGCMC 1 cut(s) 100
BsiHKAI GWGCWC 1 cut(s) 100
BslFI GGGAC 1 cut(s) 53
BsmAI GTCTC 1 cut(s) 23
BsmBI CGTCTC 1 cut(s) 23
BsmFI GGGAC 1 cut(s) 53
Bsp1286I GDGCHC 1 cut(s) 100
BspACI CCGC 1 cut(s) 171
BstAPI GCANNNNNTGC 1 cut(s) 104
BstDEI CTNAG 1 cut(s) 195
BstF5I GGATG 1 cut(s) 149
BstMAI GTCTC 1 cut(s) 23
BstMWI GCNNNNNNNGC 2 cut(s) 104, 179
BstNSI RCATGY 2 cut(s) 107, 186
BstSLI GKGCMC 1 cut(s) 100
BtsCI GGATG 1 cut(s) 149
CviAII CATG 4 cut(s) 53, 104, 117, 183
CviJI RGCY 2 cut(s) 26, 86
CviKI_1 RGCY 2 cut(s) 26, 86
DdeI CTNAG 1 cut(s) 195
EcoT22I ATGCAT 1 cut(s) 45
Esp3I CGTCTC 1 cut(s) 23
FaeI CATG 4 cut(s) 56, 107, 120, 186
FaiI YATR 9 cut(s) 39, 41, 45, 54, 93, 105, 118, 162, 184
FaqI GGGAC 1 cut(s) 53
FatI CATG 4 cut(s) 52, 103, 116, 182
FauNDI CATATG 1 cut(s) 39
FokI GGATG 1 cut(s) 136
FspBI CTAG 2 cut(s) 87, 174
Hin1II CATG 4 cut(s) 56, 107, 120, 186
HinfI GANTC 1 cut(s) 125
Hpy166II GTNNAC 1 cut(s) 98
Hpy188I TCNGA 1 cut(s) 76
Hpy8I GTNNAC 1 cut(s) 98
HpyAV CCTTC 1 cut(s) 81
HpyCH4IV ACGT 1 cut(s) 16
HpyCH4V TGCA 3 cut(s) 43, 98, 107
HpyF10VI GCNNNNNNNGC 2 cut(s) 104, 179
HpyF3I CTNAG 1 cut(s) 195
HpySE526I ACGT 1 cut(s) 16
Hsp92II CATG 4 cut(s) 56, 107, 120, 186
MaeI CTAG 2 cut(s) 87, 174
MaeII ACGT 1 cut(s) 16
MhlI GDGCHC 1 cut(s) 100
MnlI CCTC 2 cut(s) 52, 144
Mph1103I ATGCAT 1 cut(s) 45
MseI TTAA 1 cut(s) 8
MwoI GCNNNNNNNGC 2 cut(s) 104, 179
NdeI CATATG 1 cut(s) 39
NlaIII CATG 4 cut(s) 56, 107, 120, 186
NsiI ATGCAT 1 cut(s) 45
NspI RCATGY 2 cut(s) 107, 186
PfeI GAWTC 1 cut(s) 125
PflFI GACNNNGTC 1 cut(s) 65
PsyI GACNNNGTC 1 cut(s) 65
SaqAI TTAA 1 cut(s) 8
SduI GDGCHC 1 cut(s) 100
SetI ASST 2 cut(s) 19, 28
SgeI CNNG 9 cut(s) 32, 39, 65, 99, 116, 120, 129, 155, 186
SsiI CCGC 1 cut(s) 171
SspMI CTAG 2 cut(s) 87, 174
TaiI ACGT 1 cut(s) 19
TfiI GAWTC 1 cut(s) 125
Tru1I TTAA 1 cut(s) 8
Tru9I TTAA 1 cut(s) 8
TspDTI ATGAA 2 cut(s) 27, 138
Tth111I GACNNNGTC 1 cut(s) 65
VneI GTGCAC 1 cut(s) 96
XceI RCATGY 2 cut(s) 107, 186
XspI CTAG 2 cut(s) 87, 174
Zsp2I ATGCAT 1 cut(s) 45
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.