Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001703

Physical Location & Seq

Genomic Coordinates Forward (+)

17324519 .. 17326533

Gene Structure 2015 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G36750.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 822 bp

ATGGGGAAAGGAGGAGGTTGTGTTCCGAGCAAGAAGAAGAAGCCGGCCACCACCGGCGATGGTCCCGGAATCGATGATGATAACGACGCTACTAATGCTCCGATCCAAATTGACGATGATCAAACCACCATTGACGGCGATCGAACAACGGCGACGAATACTGGAGGAACAACAACACCAGCGATTACTACTACGGCTGCTAAGATCTCGTCACCGCTCAAGATCTTCGTCGTGTTCTATTCGATGTACGGACATGTGGAGAGCTTAGCGAAGAGGATGAAAAAGGGAGTGGATAGCGTCGAAGGAGTGGAGGCGACGTTGTACAGAGTTCCGGAGACGCTTTCGCAGGAGGTTGTTGAGCAGATGAAGGCGCCGGTTAAGGATTTGGAGATTCCGGAGATTACGGCGGCGGAATTGACGGCGGCTGATGGATTTCTGTTTGGATTTCCGACTAGGTATGGTTGTATGGCTGCGCAGATGAAGGCGTTTTTTGATTCGACGGGATCATTGTGGAAGGAGCAGAGTCTTGCTGGTAAGCCTGCTGGATTCTTTGTGAGCACTGGCACTCAAGGAGGTGGCCAAGAGACCACTGCATGGACAGCAATCACACAGCTTGTGCACCATGGGATGCTATTTGTACCAATAGGCTACACATTTGGAGCTGGAATGTTCAAGATGGACTCGATACGTGGAGGCTCTCCTTATGGAGCAGGTGTGTTCGCTGGTGATGGGTCAAGAGAAGCAACAGAAACAGAATTGGCTCTTGCTGAACATCAAGGAAACTACATGGCTGCAATAGTCAAAAGACTTGCTCAACCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0003955 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0008150 GO:0008152 GO:0010181 GO:0016020 GO:0016491 GO:0016651 GO:0016655 GO:0032553 GO:0036094 GO:0043167 GO:0043168 GO:0044424 GO:0044464 GO:0048037 GO:0050662 GO:0055114 GO:0071944 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00130 ko01110 map00130 map01110

Pfam Domains

Protein Families

FMN_red

Protein Analysis

273

Amino Acids

28.75

Weight (kDa)

5.17

Isoelectric Point (pI)

34.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Flavodoxin_1	PF00258	77 - 209	7.5e-16	Flavodoxin
FMN_red	PF03358	88 - 215	4.3e-13	NADPH-dependent FMN reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001703)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36750
fragaria_vesca	FvH4_1g13950 FvH4_2g08230 FvH4_2g08230 FvH4_2g08230
malus_domestica	MD02G1152700.v1.1 MD05G1334200.v1.1 MD10G1081100.v1.1 MD10G1309100.v1.1
prunus_persica	Prupe.4G031000_v2.0.a1 Prupe.4G031000_v2.0.a1 Prupe.7G149400_v2.0.a1 Prupe.8G102400_v2.0.a1
pyrus_communis	pycom02g12050 pycom05g30590 pycom10g06420 pycom10g26050 pycom15g23270
rosa_chinensis	RchiOBHm_Chr2g0102261 RchiOBHm_Chr6g0263041 RchiOBHm_Chr6g0263101
rosa_laevigata	RLG00000014375 RLG00000014383 RLG00000017140
rosa_multiflora	Rmu_co8453355.1_g000001 Rmu_sc0002146.1_g000009 Rmu_sc0002479.1_g000004
rosa_roxburghii	Rroxscaffold_2G00140620 Rroxscaffold_7G00204680 Rroxscaffold_7G00204780
rosa_rugosa	Rorug02G0106100 Rorug02G0106100 Rorug06G0002900 Rorug06G0003500
rosa_samantha	Rh2AG154000 Rh2BG160000 Rh2CG159600 Rh2DG159600 Rh6AG122100 Rh6BG115200 Rh6BG116700 Rh6CG113900 Rh6CG115200 Rh6DG103000 Rh6DG103800
rosa_wichuraiana	Rw2G012040 Rw6G010470 Rw6G010520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	701
Acc16I	TGCGCA	1 cut(s)	474
Acc36I	ACCTGC	1 cut(s)	701
AccB1I	GGYRCC	1 cut(s)	370
AccB7I	CCANNNNNTGG	1 cut(s)	594
AccBSI	CCGCTC	1 cut(s)	217
AccIII	TCCGGA	2 cut(s)	331, 394
AciI	CCGC	4 cut(s)	215, 407, 410, 422
AclWI	GGATC	2 cut(s)	97, 511
AcoI	YGGCCR	2 cut(s)	45, 577
AcyI	GRCGYC	1 cut(s)	371
AfaI	GTAC	3 cut(s)	248, 323, 639
AfiI	CCNNNNNNNGG	1 cut(s)	594
AflIII	ACRYGT	1 cut(s)	253
AgsI	TTSAA	1 cut(s)	673
AloI	GAACNNNNNNTCC	1 cut(s)	38
AluBI	AGCT	3 cut(s)	264, 613, 662
AluI	AGCT	3 cut(s)	264, 613, 662
Alw21I	GWGCWC	2 cut(s)	560, 621
Alw26I	GTCTC	2 cut(s)	329, 578
Alw44I	GTGCAC	1 cut(s)	617
AlwI	GGATC	2 cut(s)	97, 511
Aor13HI	TCCGGA	2 cut(s)	331, 394
AoxI	GGCC	2 cut(s)	45, 577
ApaLI	GTGCAC	1 cut(s)	617
ApeKI	GCWGC	3 cut(s)	197, 470, 791
AspLEI	GCGC	2 cut(s)	373, 475
AspS9I	GGNCC	1 cut(s)	62
AsuC2I	CCSGG	1 cut(s)	66
AsuHPI	GGTGA	2 cut(s)	204, 737
AvaII	GGWCC	1 cut(s)	62
BaeGI	GKGCMC	1 cut(s)	621
BalI	TGGCCA	1 cut(s)	579
BanI	GGYRCC	1 cut(s)	370
Bbv12I	GWGCWC	2 cut(s)	560, 621
BbvI	GCAGC	3 cut(s)	184, 457, 778
BccI	CCATC	4 cut(s)	53, 422, 670, 722
BceAI	ACGGC	5 cut(s)	151, 165, 210, 420, 435
BclI	TGATCA	1 cut(s)	118
BcnI	CCSGG	1 cut(s)	66
BcoDI	GTCTC	2 cut(s)	329, 578
BfaI	CTAG	1 cut(s)	453
BfoI	RGCGCY	1 cut(s)	374
BfuAI	ACCTGC	1 cut(s)	701
BglII	AGATCT	2 cut(s)	204, 222
BisI	GCNGC	5 cut(s)	198, 408, 423, 471, 792
BlpI	GCTNAGC	1 cut(s)	265
BlsI	GCNGC	5 cut(s)	199, 409, 424, 472, 793
Bme1390I	CCNGG	1 cut(s)	66
Bme18I	GGWCC	1 cut(s)	62
BmgT120I	GGNCC	1 cut(s)	62
BmiI	GGNNCC	2 cut(s)	64, 372
BmrFI	CCNGG	1 cut(s)	66
BmsI	GCATC	1 cut(s)	618
BpmI	CTGGAG	1 cut(s)	183
Bpu1102I	GCTNAGC	1 cut(s)	265
BpuEI	CTTGAG	2 cut(s)	203, 552
BpuMI	CCSGG	1 cut(s)	66
Bsa29I	ATCGAT	1 cut(s)	72
BsaAI	YACGTR	1 cut(s)	689
BsaHI	GRCGYC	1 cut(s)	371
BsaI	GGTCTC	1 cut(s)	578
BsaJI	CCNNGG	1 cut(s)	622
BsaWI	WCCGGW	2 cut(s)	331, 394
BsaXI	ACNNNNNCTCC	8 cut(s)	6, 36, 82, 112, 302, 332, 699, 729
Bsc4I	CCNNNNNNNGG	1 cut(s)	594
Bse118I	RCCGGY	3 cut(s)	43, 53, 373
Bse1I	ACTGG	2 cut(s)	166, 565
BseAI	TCCGGA	2 cut(s)	331, 394
BseCI	ATCGAT	1 cut(s)	72
BseDI	CCNNGG	1 cut(s)	622
BseGI	GGATG	2 cut(s)	282, 633
BseLI	CCNNNNNNNGG	1 cut(s)	594
BseNI	ACTGG	2 cut(s)	166, 565
BseRI	GAGGAG	1 cut(s)	27
BseSI	GKGCMC	1 cut(s)	621
BseXI	GCAGC	3 cut(s)	184, 457, 778
Bsh1285I	CGRYCG	1 cut(s)	142
BshFI	GGCC	2 cut(s)	47, 579
BshNI	GGYRCC	1 cut(s)	370
BshVI	ATCGAT	1 cut(s)	72
BsiEI	CGRYCG	1 cut(s)	142
BsiHKAI	GWGCWC	2 cut(s)	560, 621
BsiSI	CCGG	6 cut(s)	44, 54, 66, 332, 374, 395
BslFI	GGGAC	1 cut(s)	48
BslI	CCNNNNNNNGG	1 cut(s)	594
BsmAI	GTCTC	2 cut(s)	329, 578
BsmBI	CGTCTC	1 cut(s)	329
BsmFI	GGGAC	1 cut(s)	48
BsnI	GGCC	2 cut(s)	47, 579
Bso31I	GGTCTC	1 cut(s)	578
Bsp1286I	GDGCHC	2 cut(s)	560, 621
Bsp13I	TCCGGA	2 cut(s)	331, 394
Bsp1407I	TGTACA	1 cut(s)	321
Bsp143I	GATC	6 cut(s)	102, 118, 139, 204, 222, 503
Bsp1720I	GCTNAGC	1 cut(s)	265
Bsp19I	CCATGG	1 cut(s)	622
BspACI	CCGC	4 cut(s)	215, 407, 410, 422
BspANI	GGCC	2 cut(s)	47, 579
BspDI	ATCGAT	1 cut(s)	72
BspEI	TCCGGA	2 cut(s)	331, 394
BspLI	GGNNCC	2 cut(s)	64, 372
BspMI	ACCTGC	1 cut(s)	701
BspPI	GGATC	2 cut(s)	97, 511
BspT107I	GGYRCC	1 cut(s)	370
BspTNI	GGTCTC	1 cut(s)	578
BsrBI	CCGCTC	1 cut(s)	217
BsrFI	RCCGGY	3 cut(s)	43, 53, 373
BsrGI	TGTACA	1 cut(s)	321
BsrI	ACTGG	2 cut(s)	166, 565
BssAI	RCCGGY	3 cut(s)	43, 53, 373
BssECI	CCNNGG	1 cut(s)	622
BssMI	GATC	6 cut(s)	102, 118, 139, 204, 222, 503
BssNI	GRCGYC	1 cut(s)	371
BssT1I	CCWWGG	1 cut(s)	622
Bst6I	CTCTTC	1 cut(s)	266
BstACI	GRCGYC	1 cut(s)	371
BstAUI	TGTACA	1 cut(s)	321
BstBAI	YACGTR	1 cut(s)	689
BstC8I	GCNNGC	2 cut(s)	45, 540
BstDEI	CTNAG	2 cut(s)	201, 265
BstDSI	CCRYGG	1 cut(s)	622
BstF5I	GGATG	2 cut(s)	282, 633
BstH2I	RGCGCY	1 cut(s)	374
BstHHI	GCGC	2 cut(s)	373, 475
BstKTI	GATC	6 cut(s)	105, 121, 142, 207, 225, 506
BstMAI	GTCTC	2 cut(s)	329, 578
BstMBI	GATC	6 cut(s)	102, 118, 139, 204, 222, 503
BstMCI	CGRYCG	1 cut(s)	142
BstMWI	GCNNNNNNNGC	2 cut(s)	95, 599
BstNSI	RCATGY	1 cut(s)	257
BstSCI	CCNGG	1 cut(s)	64
BstSLI	GKGCMC	1 cut(s)	621
BstV1I	GCAGC	3 cut(s)	184, 457, 778
BstX2I	RGATCY	2 cut(s)	204, 222
BstYI	RGATCY	2 cut(s)	204, 222
Bsu15I	ATCGAT	1 cut(s)	72
BsuRI	GGCC	2 cut(s)	47, 579
BsuTUI	ATCGAT	1 cut(s)	72
BtgI	CCRYGG	1 cut(s)	622
BtgZI	GCGATG	1 cut(s)	72
BtsCI	GGATG	2 cut(s)	282, 633
BtsI	GCAGTG	1 cut(s)	588
BtsIMutI	CAGTG	2 cut(s)	558, 588
BveI	ACCTGC	1 cut(s)	701
Cac8I	GCNNGC	2 cut(s)	45, 540
CfoI	GCGC	2 cut(s)	373, 475
Cfr10I	RCCGGY	3 cut(s)	43, 53, 373
Cfr13I	GGNCC	1 cut(s)	62
ClaI	ATCGAT	1 cut(s)	72
CseI	GACGC	3 cut(s)	95, 286, 346
Csp6I	GTAC	3 cut(s)	247, 322, 638
CviAII	CATG	4 cut(s)	254, 594, 623, 787
CviQI	GTAC	3 cut(s)	247, 322, 638
DdeI	CTNAG	2 cut(s)	201, 265
DinI	GGCGCC	1 cut(s)	372
DpnI	GATC	6 cut(s)	104, 120, 141, 206, 224, 505
DpnII	GATC	6 cut(s)	102, 118, 139, 204, 222, 503
EaeI	YGGCCR	2 cut(s)	45, 577
Eam1104I	CTCTTC	1 cut(s)	266
EarI	CTCTTC	1 cut(s)	266
EciI	GGCGGA	1 cut(s)	425
Eco130I	CCWWGG	1 cut(s)	622
Eco31I	GGTCTC	1 cut(s)	578
Eco47I	GGWCC	1 cut(s)	62
EcoT14I	CCWWGG	1 cut(s)	622
EgeI	GGCGCC	1 cut(s)	372
EheI	GGCGCC	1 cut(s)	372
ErhI	CCWWGG	1 cut(s)	622
Esp3I	CGTCTC	1 cut(s)	329
FaeI	CATG	4 cut(s)	257, 597, 626, 790
FaiI	YATR	7 cut(s)	255, 459, 467, 595, 624, 705, 788
FaqI	GGGAC	1 cut(s)	48
FatI	CATG	4 cut(s)	253, 593, 622, 786
FbaI	TGATCA	1 cut(s)	118
Fnu4HI	GCNGC	5 cut(s)	198, 408, 423, 471, 792
FokI	GGATG	2 cut(s)	289, 640
Fsp4HI	GCNGC	5 cut(s)	198, 408, 423, 471, 792
FspBI	CTAG	1 cut(s)	453
FspI	TGCGCA	1 cut(s)	474
GlaI	GCGC	2 cut(s)	372, 474
GluI	GCNGC	5 cut(s)	198, 408, 423, 471, 792
GsuI	CTGGAG	1 cut(s)	183
HaeII	RGCGCY	1 cut(s)	374
HaeIII	GGCC	2 cut(s)	47, 579
HapII	CCGG	6 cut(s)	44, 54, 66, 332, 374, 395
HgaI	GACGC	3 cut(s)	95, 286, 346
HhaI	GCGC	2 cut(s)	373, 475
Hin1I	GRCGYC	1 cut(s)	371
Hin1II	CATG	4 cut(s)	257, 597, 626, 790
Hin6I	GCGC	2 cut(s)	371, 473
HinP1I	GCGC	2 cut(s)	371, 473
HinfI	GANTC	6 cut(s)	69, 391, 494, 523, 546, 680
HpaII	CCGG	6 cut(s)	44, 54, 66, 332, 374, 395
HphI	GGTGA	2 cut(s)	204, 737
Hpy166II	GTNNAC	1 cut(s)	619
Hpy188I	TCNGA	3 cut(s)	27, 102, 450
Hpy188III	TCNNGA	5 cut(s)	220, 332, 395, 673, 735
Hpy8I	GTNNAC	1 cut(s)	619
Hpy99I	CGWCG	6 cut(s)	89, 157, 233, 302, 319, 502
HpyAV	CCTTC	4 cut(s)	296, 361, 475, 508
HpyCH4IV	ACGT	2 cut(s)	317, 688
HpyCH4V	TGCA	3 cut(s)	593, 619, 794
HpyF10VI	GCNNNNNNNGC	2 cut(s)	95, 599
HpyF3I	CTNAG	2 cut(s)	201, 265
HpySE526I	ACGT	2 cut(s)	317, 688
Hsp92I	GRCGYC	1 cut(s)	371
Hsp92II	CATG	4 cut(s)	257, 597, 626, 790
HspAI	GCGC	2 cut(s)	371, 473
KasI	GGCGCC	1 cut(s)	370
Kpn2I	TCCGGA	2 cut(s)	331, 394
KroI	GCCGGC	1 cut(s)	43
KroNI	GCCGGC	1 cut(s)	45
Ksp22I	TGATCA	1 cut(s)	118
Kzo9I	GATC	6 cut(s)	102, 118, 139, 204, 222, 503
LmnI	GCTCC	4 cut(s)	103, 517, 659, 707
Lsp1109I	GCAGC	3 cut(s)	184, 457, 778
LweI	GCATC	1 cut(s)	618
MaeI	CTAG	1 cut(s)	453
MaeII	ACGT	2 cut(s)	317, 688
MaeIII	GTNAC	1 cut(s)	210
MalI	GATC	6 cut(s)	104, 120, 141, 206, 224, 505
MbiI	CCGCTC	1 cut(s)	217
MboI	GATC	6 cut(s)	102, 118, 139, 204, 222, 503
MboII	GAAGA	4 cut(s)	46, 49, 217, 283
MflI	RGATCY	2 cut(s)	204, 222
MhlI	GDGCHC	2 cut(s)	560, 621
MlsI	TGGCCA	1 cut(s)	579
MluCI	AATT	3 cut(s)	108, 413, 755
MluNI	TGGCCA	1 cut(s)	579
Mly113I	GGCGCC	1 cut(s)	371
MlyI	GAGTC	2 cut(s)	532, 674
MmeI	TCCRAC	1 cut(s)	473
MnlI	CCTC	8 cut(s)	5, 8, 158, 267, 304, 343, 566, 686
Mox20I	TGGCCA	1 cut(s)	579
MroI	TCCGGA	2 cut(s)	331, 394
MroNI	GCCGGC	1 cut(s)	43
MscI	TGGCCA	1 cut(s)	579
MseI	TTAA	2 cut(s)	378, 820
Msp20I	TGGCCA	1 cut(s)	579
MspI	CCGG	6 cut(s)	44, 54, 66, 332, 374, 395
MspR9I	CCNGG	1 cut(s)	66
MwoI	GCNNNNNNNGC	2 cut(s)	95, 599
NaeI	GCCGGC	1 cut(s)	45
NarI	GGCGCC	1 cut(s)	371
NciI	CCSGG	1 cut(s)	66
NcoI	CCATGG	1 cut(s)	622
NdeII	GATC	6 cut(s)	102, 118, 139, 204, 222, 503
NgoMIV	GCCGGC	1 cut(s)	43
NlaIII	CATG	4 cut(s)	257, 597, 626, 790
NlaIV	GGNNCC	2 cut(s)	64, 372
NmuCI	GTSAC	1 cut(s)	210
NsbI	TGCGCA	1 cut(s)	474
NspI	RCATGY	1 cut(s)	257
PaqCI	CACCTGC	1 cut(s)	701
PciI	ACATGT	1 cut(s)	253
PdiI	GCCGGC	1 cut(s)	45
PfeI	GAWTC	4 cut(s)	69, 391, 494, 546
PflMI	CCANNNNNTGG	1 cut(s)	594
PfoI	TCCNGGA	1 cut(s)	64
PkrI	GCNGC	5 cut(s)	199, 409, 424, 472, 793
Ple19I	CGATCG	1 cut(s)	142
PleI	GAGTC	2 cut(s)	531, 674
PluTI	GGCGCC	1 cut(s)	374
PpsI	GAGTC	2 cut(s)	531, 674
Ppu21I	YACGTR	1 cut(s)	689
PscI	ACATGT	1 cut(s)	253
PspN4I	GGNNCC	2 cut(s)	64, 372
PspPI	GGNCC	1 cut(s)	62
PsuI	RGATCY	2 cut(s)	204, 222
PvuI	CGATCG	1 cut(s)	142
RsaI	GTAC	3 cut(s)	248, 323, 639
RsaNI	GTAC	3 cut(s)	247, 322, 638
SaqAI	TTAA	2 cut(s)	378, 820
SatI	GCNGC	5 cut(s)	198, 408, 423, 471, 792
Sau3AI	GATC	6 cut(s)	102, 118, 139, 204, 222, 503
Sau96I	GGNCC	1 cut(s)	62
SchI	GAGTC	2 cut(s)	532, 674
ScrFI	CCNGG	1 cut(s)	66
SduI	GDGCHC	2 cut(s)	560, 621
SfaNI	GCATC	1 cut(s)	618
SfoI	GGCGCC	1 cut(s)	372
SgrAI	CRCCGGYG	1 cut(s)	53
SinI	GGWCC	1 cut(s)	62
SmlI	CTYRAG	2 cut(s)	218, 567
SmoI	CTYRAG	2 cut(s)	218, 567
Sse9I	AATT	3 cut(s)	108, 413, 755
SsiI	CCGC	4 cut(s)	215, 407, 410, 422
SspDI	GGCGCC	1 cut(s)	370
SspMI	CTAG	1 cut(s)	453
StyD4I	CCNGG	1 cut(s)	64
StyI	CCWWGG	1 cut(s)	622
TaiI	ACGT	2 cut(s)	320, 691
TaqI	TCGA	6 cut(s)	72, 142, 242, 300, 497, 683
TasI	AATT	3 cut(s)	108, 413, 755
TatI	WGTACW	1 cut(s)	321
TauI	GCSGC	2 cut(s)	410, 425
TfiI	GAWTC	4 cut(s)	69, 391, 494, 546
Tru1I	TTAA	2 cut(s)	378, 820
Tru9I	TTAA	2 cut(s)	378, 820
TscAI	CASTG	2 cut(s)	565, 595
TseFI	GTSAC	1 cut(s)	210
TseI	GCWGC	3 cut(s)	197, 470, 791
Tsp45I	GTSAC	1 cut(s)	210
TspDTI	ATGAA	3 cut(s)	293, 380, 494
TspGWI	ACGGA	1 cut(s)	264
TspRI	CASTG	2 cut(s)	565, 595
Van91I	CCANNNNNTGG	1 cut(s)	594
VneI	GTGCAC	1 cut(s)	617
VpaK11BI	GGWCC	1 cut(s)	62
XceI	RCATGY	1 cut(s)	257
XspI	CTAG	1 cut(s)	453

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.