Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001703

Physical Location & Seq

Genomic Coordinates Reverse (-)

16126448 .. 16128466

Gene Structure 2019 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G149400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 801 bp

ATGGGGAAAGGCGGGGGCTGTGTCCCAAGCAAGAAGAAGGTCCCCTCCAGCGCCGCCAATCCCGACGCCTCCCACCCAAACGCCTCGCAAAACGCGCCGCCGATCCCCACGGACGACAATCCCAATTCCATGACTCCCAGCCGAAACGACGTCGTCTCCGCCGAATCGCATCCGAATTTGCATCCGGCCCCGAAATTGAGGATATTCATAGTGTTCTACTCGATGTACGGACATGTGGAGGATTTGGCGAGGAGGATGAAGAAGGGCGTTGACGGCGTGGATGGCGTTGAGGGGTTGCTTTATCGGGTGCCCGAGACGCTGCCGAGTGAGGTGCTGGAGGCTATGAAGGCGCCGCCGAAGGACACCGAAATTCCGGAGATTTTGGCGGCGGAATTGGCGGCGGCGGACGGGGTTTTGTTTGGTTTTCCGACGAGGTACGGGAGCATGGCGGCGCAGATGAAGGCTTTTTTCGACTCGACGGGGCAGTTGTGGCAGGAGCAGAGCCTCGCTGGGAAGCCTGCTGGGTTTTTTGTCAGTACTGGAACTCAAGGAGGCGGCCAAGAAACCACTGCTTGGACGGCAATCACCCAATTGGCACATCATGGAATGCTGTTTGTTCCCATTGGGTATACTTTTGGAGCTGGCATGTTTAAGATGGACTCTGTACGAGGGGGTTCTCCATATGGTGCCGGTGTTTTTGCTGGTGATGGCACAAGAGGGCCGAGTGAAACTGAGTTGGCGCTTGCAGAGCATCAGGGGAAGTATATGGCAGCAGTAGTCAAGAAGCTTGCCCAAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0003955 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0008150 GO:0008152 GO:0010181 GO:0016020 GO:0016491 GO:0016651 GO:0016655 GO:0032553 GO:0036094 GO:0043167 GO:0043168 GO:0044424 GO:0044464 GO:0048037 GO:0050662 GO:0055114 GO:0071944 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00130 ko01110 map00130 map01110

Pfam Domains

Protein Families

FMN_red

Protein Analysis

267

Amino Acids

28.01

Weight (kDa)

6.16

Isoelectric Point (pI)

38.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001703)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36750
fragaria_vesca	FvH4_1g13950 FvH4_2g08230 FvH4_2g08230 FvH4_2g08230
malus_domestica	MD02G1152700.v1.1 MD05G1334200.v1.1 MD10G1081100.v1.1 MD10G1309100.v1.1
prunus_persica	Prupe.4G031000_v2.0.a1 Prupe.4G031000_v2.0.a1 Prupe.7G149400_v2.0.a1 Prupe.8G102400_v2.0.a1
pyrus_communis	pycom02g12050 pycom05g30590 pycom10g06420 pycom10g26050 pycom15g23270
rosa_chinensis	RchiOBHm_Chr2g0102261 RchiOBHm_Chr6g0263041 RchiOBHm_Chr6g0263101
rosa_laevigata	RLG00000014375 RLG00000014383 RLG00000017140
rosa_multiflora	Rmu_co8453355.1_g000001 Rmu_sc0002146.1_g000009 Rmu_sc0002479.1_g000004
rosa_roxburghii	Rroxscaffold_2G00140620 Rroxscaffold_7G00204680 Rroxscaffold_7G00204780
rosa_rugosa	Rorug02G0106100 Rorug02G0106100 Rorug06G0002900 Rorug06G0003500
rosa_samantha	Rh2AG154000 Rh2BG160000 Rh2CG159600 Rh2DG159600 Rh6AG122100 Rh6BG115200 Rh6BG116700 Rh6CG113900 Rh6CG115200 Rh6DG103000 Rh6DG103800
rosa_wichuraiana	Rw2G012040 Rw6G010470 Rw6G010520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	153
AccB1I	GGYRCC	3 cut(s)	307, 349, 686
AccB7I	CCANNNNNTGG	1 cut(s)	573
AccI	GTMKAC	1 cut(s)	629
AccII	CGCG	1 cut(s)	95
AccIII	TCCGGA	1 cut(s)	373
AclWI	GGATC	1 cut(s)	97
AcoI	YGGCCR	1 cut(s)	556
AcsI	RAATTY	2 cut(s)	175, 369
AcyI	GRCGYC	3 cut(s)	66, 150, 350
AfaI	GTAC	4 cut(s)	227, 437, 538, 666
AfiI	CCNNNNNNNGG	1 cut(s)	573
AflIII	ACRYGT	1 cut(s)	232
AluBI	AGCT	3 cut(s)	641, 787, 797
AluI	AGCT	3 cut(s)	641, 787, 797
Alw26I	GTCTC	2 cut(s)	160, 308
AlwI	GGATC	1 cut(s)	97
Ama87I	CYCGRG	1 cut(s)	311
Aor13HI	TCCGGA	1 cut(s)	373
AoxI	GGCC	3 cut(s)	186, 556, 719
ApeKI	GCWGC	2 cut(s)	319, 770
ApoI	RAATTY	2 cut(s)	175, 369
AspLEI	GCGC	5 cut(s)	53, 97, 352, 454, 742
AspS9I	GGNCC	3 cut(s)	40, 187, 719
AsuHPI	GGTGA	2 cut(s)	577, 716
AvaI	CYCGRG	1 cut(s)	311
AvaII	GGWCC	1 cut(s)	40
BaeGI	GKGCMC	1 cut(s)	312
BanI	GGYRCC	3 cut(s)	307, 349, 686
BbvI	GCAGC	2 cut(s)	306, 782
BccI	CCATC	3 cut(s)	275, 649, 701
BceAI	ACGGC	2 cut(s)	289, 594
BcgI	CGANNNNNNTGC	2 cut(s)	313, 347
BcoDI	GTCTC	2 cut(s)	160, 308
BfoI	RGCGCY	3 cut(s)	54, 353, 743
BmcAI	AGTACT	1 cut(s)	538
Bme18I	GGWCC	1 cut(s)	40
BmeT110I	CYCGRG	1 cut(s)	311
BmgT120I	GGNCC	3 cut(s)	40, 187, 719
BmiI	GGNNCC	5 cut(s)	42, 189, 309, 351, 688
BmsI	GCATC	3 cut(s)	178, 190, 760
BpmI	CTGGAG	2 cut(s)	31, 356
BpuEI	CTTGAG	1 cut(s)	531
BsaHI	GRCGYC	3 cut(s)	66, 150, 350
BsaJI	CCNNGG	1 cut(s)	108
BsaWI	WCCGGW	1 cut(s)	373
BsaXI	ACNNNNNCTCC	2 cut(s)	140, 170
Bsc4I	CCNNNNNNNGG	1 cut(s)	573
Bse118I	RCCGGY	1 cut(s)	689
Bse1I	ACTGG	1 cut(s)	544
BseAI	TCCGGA	1 cut(s)	373
BseDI	CCNNGG	1 cut(s)	108
BseGI	GGATG	4 cut(s)	169, 181, 261, 286
BseLI	CCNNNNNNNGG	1 cut(s)	573
BseMII	CTCAG	1 cut(s)	723
BseNI	ACTGG	1 cut(s)	544
BseRI	GAGGAG	1 cut(s)	265
BseSI	GKGCMC	1 cut(s)	312
BseXI	GCAGC	2 cut(s)	306, 782
BseYI	CCCAGC	3 cut(s)	137, 509, 521
Bsh1236I	CGCG	1 cut(s)	95
BshFI	GGCC	3 cut(s)	188, 558, 721
BshNI	GGYRCC	3 cut(s)	307, 349, 686
BsiHKCI	CYCGRG	1 cut(s)	311
BsiSI	CCGG	3 cut(s)	185, 374, 690
BslFI	GGGAC	2 cut(s)	8, 26
BslI	CCNNNNNNNGG	1 cut(s)	573
BsmAI	GTCTC	2 cut(s)	160, 308
BsmBI	CGTCTC	2 cut(s)	160, 308
BsmFI	GGGAC	2 cut(s)	8, 26
BsmI	GAATGC	1 cut(s)	612
BsnI	GGCC	3 cut(s)	188, 558, 721
BsoBI	CYCGRG	1 cut(s)	311
Bsp1286I	GDGCHC	1 cut(s)	312
Bsp13I	TCCGGA	1 cut(s)	373
Bsp143I	GATC	1 cut(s)	102
BspANI	GGCC	3 cut(s)	188, 558, 721
BspCNI	CTCAG	1 cut(s)	724
BspEI	TCCGGA	1 cut(s)	373
BspFNI	CGCG	1 cut(s)	95
BspLI	GGNNCC	5 cut(s)	42, 189, 309, 351, 688
BspPI	GGATC	1 cut(s)	97
BspT107I	GGYRCC	3 cut(s)	307, 349, 686
BsrFI	RCCGGY	1 cut(s)	689
BsrI	ACTGG	1 cut(s)	544
BssAI	RCCGGY	1 cut(s)	689
BssECI	CCNNGG	1 cut(s)	108
BssMI	GATC	1 cut(s)	102
BssNAI	GTATAC	1 cut(s)	630
BssNI	GRCGYC	3 cut(s)	66, 150, 350
Bst1107I	GTATAC	1 cut(s)	630
BstACI	GRCGYC	3 cut(s)	66, 150, 350
BstC8I	GCNNGC	4 cut(s)	519, 643, 744, 789
BstDEI	CTNAG	1 cut(s)	732
BstDSI	CCRYGG	1 cut(s)	108
BstF5I	GGATG	4 cut(s)	169, 181, 261, 286
BstFNI	CGCG	1 cut(s)	95
BstH2I	RGCGCY	3 cut(s)	54, 353, 743
BstHHI	GCGC	5 cut(s)	53, 97, 352, 454, 742
BstKTI	GATC	1 cut(s)	105
BstMAI	GTCTC	2 cut(s)	160, 308
BstMBI	GATC	1 cut(s)	102
BstMWI	GCNNNNNNNGC	9 cut(s)	94, 273, 282, 316, 347, 395, 490, 578, 748
BstNSI	RCATGY	2 cut(s)	236, 649
BstSLI	GKGCMC	1 cut(s)	312
BstUI	CGCG	1 cut(s)	95
BstV1I	GCAGC	2 cut(s)	306, 782
BstZ17I	GTATAC	1 cut(s)	630
BsuRI	GGCC	3 cut(s)	188, 558, 721
BtgI	CCRYGG	1 cut(s)	108
BtsCI	GGATG	4 cut(s)	169, 181, 261, 286
BtsI	GCAGTG	1 cut(s)	567
BtsIMutI	CAGTG	1 cut(s)	567
Cac8I	GCNNGC	4 cut(s)	519, 643, 744, 789
CfoI	GCGC	5 cut(s)	53, 97, 352, 454, 742
Cfr10I	RCCGGY	1 cut(s)	689
Cfr13I	GGNCC	3 cut(s)	40, 187, 719
CseI	GACGC	2 cut(s)	74, 325
Csp6I	GTAC	4 cut(s)	226, 436, 537, 665
CviAII	CATG	5 cut(s)	130, 233, 445, 602, 646
CviQI	GTAC	4 cut(s)	226, 436, 537, 665
DdeI	CTNAG	1 cut(s)	732
DinI	GGCGCC	1 cut(s)	351
DpnI	GATC	1 cut(s)	104
DpnII	GATC	1 cut(s)	102
EaeI	YGGCCR	1 cut(s)	556
EciI	GGCGGA	3 cut(s)	148, 404, 419
Eco47I	GGWCC	1 cut(s)	40
Eco88I	CYCGRG	1 cut(s)	311
EcoO109I	RGGNCCY	1 cut(s)	40
EgeI	GGCGCC	1 cut(s)	351
EheI	GGCGCC	1 cut(s)	351
Esp3I	CGTCTC	2 cut(s)	160, 308
FaeI	CATG	5 cut(s)	133, 236, 448, 605, 649
FaqI	GGGAC	2 cut(s)	8, 26
FatI	CATG	5 cut(s)	129, 232, 444, 601, 645
FauI	CCCGC	1 cut(s)	5
FauNDI	CATATG	1 cut(s)	682
FblI	GTMKAC	1 cut(s)	629
FokI	GGATG	4 cut(s)	156, 168, 268, 293
GlaI	GCGC	5 cut(s)	52, 96, 351, 453, 741
GsaI	CCCAGC	3 cut(s)	141, 513, 525
GsuI	CTGGAG	2 cut(s)	31, 356
HaeII	RGCGCY	3 cut(s)	54, 353, 743
HaeIII	GGCC	3 cut(s)	188, 558, 721
HapII	CCGG	3 cut(s)	185, 374, 690
HgaI	GACGC	2 cut(s)	74, 325
HhaI	GCGC	5 cut(s)	53, 97, 352, 454, 742
Hin1I	GRCGYC	3 cut(s)	66, 150, 350
Hin1II	CATG	5 cut(s)	133, 236, 448, 605, 649
Hin6I	GCGC	5 cut(s)	51, 95, 350, 452, 740
HinP1I	GCGC	5 cut(s)	51, 95, 350, 452, 740
HincII	GTYRAC	1 cut(s)	271
HindII	GTYRAC	1 cut(s)	271
HindIII	AAGCTT	2 cut(s)	785, 795
HinfI	GANTC	4 cut(s)	133, 164, 473, 659
HpaII	CCGG	3 cut(s)	185, 374, 690
HphI	GGTGA	2 cut(s)	577, 716
Hpy166II	GTNNAC	2 cut(s)	271, 630
Hpy188I	TCNGA	2 cut(s)	174, 429
Hpy188III	TCNNGA	3 cut(s)	62, 374, 781
Hpy8I	GTNNAC	2 cut(s)	271, 630
Hpy99I	CGWCG	5 cut(s)	68, 152, 155, 433, 481
HpyAV	CCTTC	5 cut(s)	31, 256, 340, 352, 454
HpyCH4IV	ACGT	1 cut(s)	150
HpyCH4V	TGCA	2 cut(s)	181, 746
HpyF10VI	GCNNNNNNNGC	9 cut(s)	94, 273, 282, 316, 347, 395, 490, 578, 748
HpyF3I	CTNAG	1 cut(s)	732
HpySE526I	ACGT	1 cut(s)	150
Hsp92I	GRCGYC	3 cut(s)	66, 150, 350
Hsp92II	CATG	5 cut(s)	133, 236, 448, 605, 649
HspAI	GCGC	5 cut(s)	51, 95, 350, 452, 740
KasI	GGCGCC	1 cut(s)	349
Kpn2I	TCCGGA	1 cut(s)	373
Kzo9I	GATC	1 cut(s)	102
LmnI	GCTCC	3 cut(s)	441, 496, 638
Lsp1109I	GCAGC	2 cut(s)	306, 782
LweI	GCATC	3 cut(s)	178, 190, 760
MaeII	ACGT	1 cut(s)	150
MalI	GATC	1 cut(s)	104
MboI	GATC	1 cut(s)	102
MboII	GAAGA	2 cut(s)	46, 271
MfeI	CAATTG	1 cut(s)	590
MhlI	GDGCHC	1 cut(s)	312
MluCI	AATT	6 cut(s)	124, 175, 194, 369, 392, 590
Mly113I	GGCGCC	1 cut(s)	350
MlyI	GAGTC	3 cut(s)	127, 467, 653
MmeI	TCCRAC	1 cut(s)	452
MroI	TCCGGA	1 cut(s)	373
MseI	TTAA	1 cut(s)	651
MspI	CCGG	3 cut(s)	185, 374, 690
MunI	CAATTG	1 cut(s)	590
Mva1269I	GAATGC	1 cut(s)	612
MvnI	CGCG	1 cut(s)	95
MwoI	GCNNNNNNNGC	9 cut(s)	94, 273, 282, 316, 347, 395, 490, 578, 748
NarI	GGCGCC	1 cut(s)	350
NdeI	CATATG	1 cut(s)	682
NdeII	GATC	1 cut(s)	102
NlaIII	CATG	5 cut(s)	133, 236, 448, 605, 649
NlaIV	GGNNCC	5 cut(s)	42, 189, 309, 351, 688
NmeAIII	GCCGAG	2 cut(s)	348, 747
NspI	RCATGY	2 cut(s)	236, 649
PciI	ACATGT	1 cut(s)	232
PcsI	WCGNNNNNNNCGW	1 cut(s)	159
PctI	GAATGC	1 cut(s)	612
PfeI	GAWTC	1 cut(s)	164
PflFI	GACNNNGTC	1 cut(s)	152
PflMI	CCANNNNNTGG	1 cut(s)	573
PleI	GAGTC	3 cut(s)	127, 467, 653
PluTI	GGCGCC	1 cut(s)	353
PpsI	GAGTC	3 cut(s)	127, 467, 653
PpuMI	RGGWCCY	1 cut(s)	40
PscI	ACATGT	1 cut(s)	232
Psp5II	RGGWCCY	1 cut(s)	40
PspFI	CCCAGC	3 cut(s)	137, 509, 521
PspN4I	GGNNCC	5 cut(s)	42, 189, 309, 351, 688
PspPI	GGNCC	3 cut(s)	40, 187, 719
PspPPI	RGGWCCY	1 cut(s)	40
PsyI	GACNNNGTC	1 cut(s)	152
RsaI	GTAC	4 cut(s)	227, 437, 538, 666
RsaNI	GTAC	4 cut(s)	226, 436, 537, 665
SaqAI	TTAA	1 cut(s)	651
Sau3AI	GATC	1 cut(s)	102
Sau96I	GGNCC	3 cut(s)	40, 187, 719
ScaI	AGTACT	1 cut(s)	538
SchI	GAGTC	3 cut(s)	127, 467, 653
SduI	GDGCHC	1 cut(s)	312
SetI	ASST	7 cut(s)	42, 153, 333, 437, 643, 789, 799
SfaNI	GCATC	3 cut(s)	178, 190, 760
SfoI	GGCGCC	1 cut(s)	351
SinI	GGWCC	1 cut(s)	40
SmlI	CTYRAG	1 cut(s)	546
SmoI	CTYRAG	1 cut(s)	546
Sse9I	AATT	6 cut(s)	124, 175, 194, 369, 392, 590
SspDI	GGCGCC	1 cut(s)	349
TaiI	ACGT	1 cut(s)	153
TaqI	TCGA	3 cut(s)	221, 471, 476
TasI	AATT	6 cut(s)	124, 175, 194, 369, 392, 590
TatI	WGTACW	1 cut(s)	536
TauI	GCSGC	8 cut(s)	56, 100, 355, 389, 401, 404, 452, 558
TfiI	GAWTC	1 cut(s)	164
Tru1I	TTAA	1 cut(s)	651
Tru9I	TTAA	1 cut(s)	651
TscAI	CASTG	1 cut(s)	574
TseI	GCWGC	2 cut(s)	319, 770
TspDTI	ATGAA	4 cut(s)	196, 272, 359, 473
TspGWI	ACGGA	2 cut(s)	125, 243
TspRI	CASTG	1 cut(s)	574
Tth111I	GACNNNGTC	1 cut(s)	152
Van91I	CCANNNNNTGG	1 cut(s)	573
VpaK11BI	GGWCC	1 cut(s)	40
XapI	RAATTY	2 cut(s)	175, 369
XceI	RCATGY	2 cut(s)	236, 649
XmiI	GTMKAC	1 cut(s)	629
ZraI	GACGTC	1 cut(s)	151
ZrmI	AGTACT	1 cut(s)	538

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.