Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0001703

Physical Location & Seq

Genomic Coordinates Reverse (-)

13381475 .. 13384207

Gene Structure 2733 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G102400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 807 bp

ATGGGTAAAGGAGGTGGTTGTGTGCCAAGTAAGAACAGGCCACCCAAAGGCGTTTCTGATCAAGATCTTCAAAACCCAGAAAGCGATGGTCCTGTTCCAGACCAAAACCAAACCCAAACCACACAAACAAACCCAATTGACCATGCGATTGCACAAAGACAGCTGAGGGTTTTCATAGTGTTTTACTCAATGTATGGGCATGTGGAGGTCTTGGCCAGGAGGATAAAGAAAGGGGTTGATTCCATGGATGGGGTTGAAGGGTTTCTGTACCGGGTTCCGGAGACGCTGTCCTCTGAAGTATTGGAGCAGATGAAGGTGCCCAAGAAAGATGGTAATGCAGATGAAGTGCCTGTGATATTGGCCGAGAGGTTGGTGGAGGCTGACGGGCTCTTATTCGGGTTTCCGACCCGGTATGGATCCATGGCTGCTCAGATGAAAGCCTTTTTTGACTCCACAGGGCACTTGTGGAGGGAGCAGAGGCTTGCAGGTGTGCCTGCTGGGTTCTTTGTGAGTACTGGCACACAGGGTGGGGGGCAAGAGACCACTGCTTGGACAGCAATTACTCAGTTAGCACACCATGGAATGCTCTATGTTCCTATTGGTTACACATTTGGTGCCGGAATGTTTGAAATGGACTCTCTTAGAGGAGGGTCTCCATATGGTGCTGGTGTCCTTTCTGGTGATGGCACAAGGAAACCAAGTGAAACAGAGCTGGCTCTCGCAGAGCATCAAGGGAAATACATGGCTGGAATAGTCAAGAGGTTTGCACAGCCTTCTTTTCGTGCGCCAGGTCTTGGACTGGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00130 ko01110 map00130 map01110

Pfam Domains

Protein Families

FMN_red

Protein Analysis

269

Amino Acids

28.96

Weight (kDa)

6.09

Isoelectric Point (pI)

36.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001703)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36750
fragaria_vesca	FvH4_1g13950 FvH4_2g08230 FvH4_2g08230 FvH4_2g08230
malus_domestica	MD02G1152700.v1.1 MD05G1334200.v1.1 MD10G1081100.v1.1 MD10G1309100.v1.1
prunus_persica	Prupe.4G031000_v2.0.a1 Prupe.4G031000_v2.0.a1 Prupe.7G149400_v2.0.a1 Prupe.8G102400_v2.0.a1
pyrus_communis	pycom02g12050 pycom05g30590 pycom10g06420 pycom10g26050 pycom15g23270
rosa_chinensis	RchiOBHm_Chr2g0102261 RchiOBHm_Chr6g0263041 RchiOBHm_Chr6g0263101
rosa_laevigata	RLG00000014375 RLG00000014383 RLG00000017140
rosa_multiflora	Rmu_co8453355.1_g000001 Rmu_sc0002146.1_g000009 Rmu_sc0002479.1_g000004
rosa_roxburghii	Rroxscaffold_2G00140620 Rroxscaffold_7G00204680 Rroxscaffold_7G00204780
rosa_rugosa	Rorug02G0106100 Rorug02G0106100 Rorug06G0002900 Rorug06G0003500
rosa_samantha	Rh2AG154000 Rh2BG160000 Rh2CG159600 Rh2DG159600 Rh6AG122100 Rh6BG115200 Rh6BG116700 Rh6CG113900 Rh6CG115200 Rh6DG103000 Rh6DG103800
rosa_wichuraiana	Rw2G012040 Rw6G010470 Rw6G010520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	476
Acc36I	ACCTGC	1 cut(s)	476
AccB1I	GGYRCC	2 cut(s)	316, 614
AccB7I	CCANNNNNTGG	2 cut(s)	549, 794
AccIII	TCCGGA	1 cut(s)	277
AclWI	GGATC	2 cut(s)	411, 424
AcoI	YGGCCR	2 cut(s)	213, 360
AcuI	CTGAAG	1 cut(s)	315
AdeI	CACNNNGTG	1 cut(s)	527
AfaI	GTAC	2 cut(s)	269, 514
AfiI	CCNNNNNNNGG	5 cut(s)	47, 249, 277, 549, 794
AgsI	TTSAA	3 cut(s)	71, 257, 629
AjnI	CCWGG	2 cut(s)	215, 787
AluBI	AGCT	2 cut(s)	163, 712
AluI	AGCT	2 cut(s)	163, 712
Alw26I	GTCTC	3 cut(s)	275, 533, 657
AlwI	GGATC	2 cut(s)	411, 424
Aor13HI	TCCGGA	1 cut(s)	277
AoxI	GGCC	3 cut(s)	38, 213, 360
ApeKI	GCWGC	1 cut(s)	425
Asp700I	GAANNNNTTC	1 cut(s)	261
AspLEI	GCGC	1 cut(s)	787
AspS9I	GGNCC	1 cut(s)	89
AsuC2I	CCSGG	2 cut(s)	272, 409
AsuHPI	GGTGA	1 cut(s)	692
AvaII	GGWCC	1 cut(s)	89
BaeGI	GKGCMC	2 cut(s)	321, 462
BalI	TGGCCA	1 cut(s)	215
BamHI	GGATCC	1 cut(s)	416
BanI	GGYRCC	2 cut(s)	316, 614
BanII	GRGCYC	1 cut(s)	390
BbvCI	CCTCAGC	1 cut(s)	164
BbvI	GCAGC	1 cut(s)	412
BccI	CCATC	4 cut(s)	80, 242, 323, 677
BciT130I	CCWGG	2 cut(s)	217, 789
BclI	TGATCA	1 cut(s)	58
BcnI	CCSGG	2 cut(s)	272, 409
BcoDI	GTCTC	3 cut(s)	275, 533, 657
BfaI	CTAG	1 cut(s)	805
BfuAI	ACCTGC	1 cut(s)	476
BglII	AGATCT	1 cut(s)	64
BisI	GCNGC	1 cut(s)	426
BlsI	GCNGC	1 cut(s)	427
BmcAI	AGTACT	1 cut(s)	514
Bme1390I	CCNGG	4 cut(s)	217, 272, 409, 789
Bme18I	GGWCC	1 cut(s)	89
BmgT120I	GGNCC	1 cut(s)	89
BmiI	GGNNCC	4 cut(s)	276, 318, 418, 616
BmrFI	CCNGG	4 cut(s)	217, 272, 409, 789
BmsI	GCATC	1 cut(s)	736
Bpu10I	CCTNAGC	1 cut(s)	164
BpuMI	CCSGG	2 cut(s)	272, 409
BsaBI	GATNNNNATC	1 cut(s)	63
BsaI	GGTCTC	2 cut(s)	533, 657
BsaJI	CCNNGG	3 cut(s)	243, 420, 577
BsaWI	WCCGGW	1 cut(s)	277
BsaXI	ACNNNNNCTCC	2 cut(s)	272, 302
Bsc4I	CCNNNNNNNGG	5 cut(s)	47, 249, 277, 549, 794
Bse1I	ACTGG	2 cut(s)	520, 804
Bse8I	GATNNNNATC	1 cut(s)	63
BseAI	TCCGGA	1 cut(s)	277
BseBI	CCWGG	2 cut(s)	217, 789
BseDI	CCNNGG	3 cut(s)	243, 420, 577
BseGI	GGATG	1 cut(s)	253
BseJI	GATNNNNATC	1 cut(s)	63
BseLI	CCNNNNNNNGG	5 cut(s)	47, 249, 277, 549, 794
BseMII	CTCAG	3 cut(s)	155, 443, 578
BseNI	ACTGG	2 cut(s)	520, 804
BseRI	GAGGAG	1 cut(s)	660
BseSI	GKGCMC	2 cut(s)	321, 462
BseXI	GCAGC	1 cut(s)	412
BseYI	CCCAGC	1 cut(s)	497
BshFI	GGCC	3 cut(s)	40, 215, 362
BshNI	GGYRCC	2 cut(s)	316, 614
BsiSI	CCGG	4 cut(s)	271, 278, 409, 618
BslI	CCNNNNNNNGG	5 cut(s)	47, 249, 277, 549, 794
BsmAI	GTCTC	3 cut(s)	275, 533, 657
BsmBI	CGTCTC	1 cut(s)	275
BsmI	GAATGC	1 cut(s)	588
BsnI	GGCC	3 cut(s)	40, 215, 362
Bso31I	GGTCTC	2 cut(s)	533, 657
Bsp1286I	GDGCHC	3 cut(s)	321, 390, 462
Bsp13I	TCCGGA	1 cut(s)	277
Bsp143I	GATC	3 cut(s)	58, 64, 416
Bsp19I	CCATGG	3 cut(s)	243, 420, 577
BspANI	GGCC	3 cut(s)	40, 215, 362
BspCNI	CTCAG	3 cut(s)	156, 442, 577
BspEI	TCCGGA	1 cut(s)	277
BspLI	GGNNCC	4 cut(s)	276, 318, 418, 616
BspMI	ACCTGC	1 cut(s)	476
BspPI	GGATC	2 cut(s)	411, 424
BspT107I	GGYRCC	2 cut(s)	316, 614
BspTNI	GGTCTC	2 cut(s)	533, 657
BsrI	ACTGG	2 cut(s)	520, 804
BssECI	CCNNGG	3 cut(s)	243, 420, 577
BssMI	GATC	3 cut(s)	58, 64, 416
BssT1I	CCWWGG	3 cut(s)	243, 420, 577
Bst2UI	CCWGG	2 cut(s)	217, 789
BstC8I	GCNNGC	3 cut(s)	483, 495, 714
BstDEI	CTNAG	4 cut(s)	164, 429, 564, 641
BstDSI	CCRYGG	3 cut(s)	243, 420, 577
BstF5I	GGATG	1 cut(s)	253
BstHHI	GCGC	1 cut(s)	787
BstKTI	GATC	3 cut(s)	61, 67, 419
BstMAI	GTCTC	3 cut(s)	275, 533, 657
BstMBI	GATC	3 cut(s)	58, 64, 416
BstMWI	GCNNNNNNNGC	1 cut(s)	554
BstNI	CCWGG	2 cut(s)	217, 789
BstNSI	RCATGY	1 cut(s)	203
BstSCI	CCNGG	4 cut(s)	215, 270, 407, 787
BstSLI	GKGCMC	2 cut(s)	321, 462
BstV1I	GCAGC	1 cut(s)	412
BstX2I	RGATCY	2 cut(s)	64, 416
BstYI	RGATCY	2 cut(s)	64, 416
BsuRI	GGCC	3 cut(s)	40, 215, 362
BtgI	CCRYGG	3 cut(s)	243, 420, 577
BtgZI	GCGATG	1 cut(s)	99
BtsCI	GGATG	1 cut(s)	253
BtsI	GCAGTG	1 cut(s)	543
BtsIMutI	CAGTG	1 cut(s)	543
BveI	ACCTGC	1 cut(s)	476
Cac8I	GCNNGC	3 cut(s)	483, 495, 714
CfoI	GCGC	1 cut(s)	787
Cfr13I	GGNCC	1 cut(s)	89
CseI	GACGC	1 cut(s)	292
Csp6I	GTAC	2 cut(s)	268, 513
CviAII	CATG	6 cut(s)	143, 200, 244, 421, 578, 742
CviQI	GTAC	2 cut(s)	268, 513
DdeI	CTNAG	4 cut(s)	164, 429, 564, 641
DpnI	GATC	3 cut(s)	60, 66, 418
DpnII	GATC	3 cut(s)	58, 64, 416
DraIII	CACNNNGTG	1 cut(s)	527
EaeI	YGGCCR	2 cut(s)	213, 360
Eco130I	CCWWGG	3 cut(s)	243, 420, 577
Eco24I	GRGCYC	1 cut(s)	390
Eco31I	GGTCTC	2 cut(s)	533, 657
Eco47I	GGWCC	1 cut(s)	89
Eco57I	CTGAAG	1 cut(s)	315
EcoRII	CCWGG	2 cut(s)	215, 787
EcoT14I	CCWWGG	3 cut(s)	243, 420, 577
EcoT38I	GRGCYC	1 cut(s)	390
ErhI	CCWWGG	3 cut(s)	243, 420, 577
Esp3I	CGTCTC	1 cut(s)	275
FaeI	CATG	6 cut(s)	146, 203, 247, 424, 581, 745
FatI	CATG	6 cut(s)	142, 199, 243, 420, 577, 741
FauNDI	CATATG	1 cut(s)	658
FbaI	TGATCA	1 cut(s)	58
Fnu4HI	GCNGC	1 cut(s)	426
FokI	GGATG	1 cut(s)	260
FriOI	GRGCYC	1 cut(s)	390
Fsp4HI	GCNGC	1 cut(s)	426
FspBI	CTAG	1 cut(s)	805
GlaI	GCGC	1 cut(s)	786
GluI	GCNGC	1 cut(s)	426
GsaI	CCCAGC	1 cut(s)	501
HaeIII	GGCC	3 cut(s)	40, 215, 362
HapII	CCGG	4 cut(s)	271, 278, 409, 618
HgaI	GACGC	1 cut(s)	292
HhaI	GCGC	1 cut(s)	787
Hin1II	CATG	6 cut(s)	146, 203, 247, 424, 581, 745
Hin6I	GCGC	1 cut(s)	785
HinP1I	GCGC	1 cut(s)	785
HinfI	GANTC	3 cut(s)	239, 449, 635
HpaII	CCGG	4 cut(s)	271, 278, 409, 618
HphI	GGTGA	1 cut(s)	692
Hpy188I	TCNGA	4 cut(s)	58, 295, 405, 432
Hpy188III	TCNNGA	4 cut(s)	62, 98, 278, 757
HpyAV	CCTTC	3 cut(s)	251, 307, 783
HpyCH4V	TGCA	4 cut(s)	152, 338, 485, 767
HpyF10VI	GCNNNNNNNGC	1 cut(s)	554
HpyF3I	CTNAG	4 cut(s)	164, 429, 564, 641
Hsp92II	CATG	6 cut(s)	146, 203, 247, 424, 581, 745
HspAI	GCGC	1 cut(s)	785
Kpn2I	TCCGGA	1 cut(s)	277
Ksp22I	TGATCA	1 cut(s)	58
Kzo9I	GATC	3 cut(s)	58, 64, 416
LmnI	GCTCC	2 cut(s)	304, 472
Lsp1109I	GCAGC	1 cut(s)	412
LweI	GCATC	1 cut(s)	736
MaeI	CTAG	1 cut(s)	805
MaeIII	GTNAC	1 cut(s)	602
MalI	GATC	3 cut(s)	60, 66, 418
MboI	GATC	3 cut(s)	58, 64, 416
MboII	GAAGA	1 cut(s)	59
MfeI	CAATTG	1 cut(s)	135
MflI	RGATCY	2 cut(s)	64, 416
MhlI	GDGCHC	3 cut(s)	321, 390, 462
MlsI	TGGCCA	1 cut(s)	215
MluCI	AATT	2 cut(s)	135, 558
MluNI	TGGCCA	1 cut(s)	215
MlyI	GAGTC	2 cut(s)	443, 629
MmeI	TCCRAC	1 cut(s)	428
Mox20I	TGGCCA	1 cut(s)	215
MroI	TCCGGA	1 cut(s)	277
MroXI	GAANNNNTTC	1 cut(s)	261
MscI	TGGCCA	1 cut(s)	215
Msp20I	TGGCCA	1 cut(s)	215
MspA1I	CMGCKG	1 cut(s)	163
MspI	CCGG	4 cut(s)	271, 278, 409, 618
MspR9I	CCNGG	4 cut(s)	217, 272, 409, 789
MunI	CAATTG	1 cut(s)	135
Mva1269I	GAATGC	1 cut(s)	588
MvaI	CCWGG	2 cut(s)	217, 789
MwoI	GCNNNNNNNGC	1 cut(s)	554
NciI	CCSGG	2 cut(s)	272, 409
NcoI	CCATGG	3 cut(s)	243, 420, 577
NdeI	CATATG	1 cut(s)	658
NdeII	GATC	3 cut(s)	58, 64, 416
NlaIII	CATG	6 cut(s)	146, 203, 247, 424, 581, 745
NlaIV	GGNNCC	4 cut(s)	276, 318, 418, 616
NmeAIII	GCCGAG	1 cut(s)	388
NspI	RCATGY	1 cut(s)	203
PaqCI	CACCTGC	1 cut(s)	476
PctI	GAATGC	1 cut(s)	588
PdmI	GAANNNNTTC	1 cut(s)	261
PfeI	GAWTC	1 cut(s)	239
PflFI	GACNNNGTC	1 cut(s)	286
PflMI	CCANNNNNTGG	2 cut(s)	549, 794
PkrI	GCNGC	1 cut(s)	427
PleI	GAGTC	2 cut(s)	443, 629
PpsI	GAGTC	2 cut(s)	443, 629
Psp6I	CCWGG	2 cut(s)	215, 787
PspFI	CCCAGC	1 cut(s)	497
PspGI	CCWGG	2 cut(s)	215, 787
PspN4I	GGNNCC	4 cut(s)	276, 318, 418, 616
PspPI	GGNCC	1 cut(s)	89
PsuI	RGATCY	2 cut(s)	64, 416
PsyI	GACNNNGTC	1 cut(s)	286
PvuII	CAGCTG	1 cut(s)	163
RsaI	GTAC	2 cut(s)	269, 514
RsaNI	GTAC	2 cut(s)	268, 513
SatI	GCNGC	1 cut(s)	426
Sau3AI	GATC	3 cut(s)	58, 64, 416
Sau96I	GGNCC	1 cut(s)	89
ScaI	AGTACT	1 cut(s)	514
SchI	GAGTC	2 cut(s)	443, 629
ScrFI	CCNGG	4 cut(s)	217, 272, 409, 789
SduI	GDGCHC	3 cut(s)	321, 390, 462
SetI	ASST	9 cut(s)	16, 165, 210, 318, 371, 490, 714, 764, 793
SfaNI	GCATC	1 cut(s)	736
SinI	GGWCC	1 cut(s)	89
Sse9I	AATT	2 cut(s)	135, 558
SspMI	CTAG	1 cut(s)	805
StyD4I	CCNGG	4 cut(s)	215, 270, 407, 787
StyI	CCWWGG	3 cut(s)	243, 420, 577
TasI	AATT	2 cut(s)	135, 558
TatI	WGTACW	1 cut(s)	512
TfiI	GAWTC	1 cut(s)	239
TscAI	CASTG	1 cut(s)	550
TseI	GCWGC	1 cut(s)	425
TspDTI	ATGAA	4 cut(s)	163, 326, 357, 449
TspRI	CASTG	1 cut(s)	550
Tth111I	GACNNNGTC	1 cut(s)	286
Van91I	CCANNNNNTGG	2 cut(s)	549, 794
VpaK11BI	GGWCC	1 cut(s)	89
XceI	RCATGY	1 cut(s)	203
XmnI	GAANNNNTTC	1 cut(s)	261
XspI	CTAG	1 cut(s)	805
ZrmI	AGTACT	1 cut(s)	514

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.