AT5G53390

O-acyltransferase (WSD1-like)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
21656734 .. 21659367
2634 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G53390.1

Sequence Viewer

Length: 1461 bp
ATGGGTGAAGACAAGAAGACGGCAAGGGAGACGGTGGAGGAGGAACCACTTAGCCCATGTTCACGGCTGTTCAATTCGCCGGATTTTAACTGTGCAATAATCGTTACAATGGGATCTAAAGTTAAAGGAGACACACCAGCCATCATCCACGGCCTTGAACACACCCTCGTAAACCACCCTCGCTTCTCTAGCATTTTAGAGATGAACAATGGGAAGAAGCCGCGTTGGGTTCGGACAAAAGTTAAAGTAGAAGAGCATGTGATTGTTCCTGATGTGGATCCCGACATTGAAAATCCGGATCAGTATCTTGAAGACTATATCTCTAAGTTAACGACCATTCCTATGGATTTGTCTAAACCATTATGGGAAATGCACTTACTAGGCGTCAAAACATCGAACGCTGAATCCTATGCTATTCTCAAGATCCATCATTCTTTGGGTGATGGAATGTCTCTCATGTCTCTTTTACTGGCTTGTACCCGCAAAACATCAGACCCCGAGGCTTTGCCTACCGTTGCGGTTCATAAAAAACGCTTTGGACCGAGCTGCAACAGCGGGTTTTTCAACAAGATTTGGTGGTTATTTGTAGGGCTCTGGTTCATCCTAAGATTGCTATTCAACACTTTTGTTGATATCTTAATGTTTGCTCTTACAATATTTGTCTTGAGGGATACGGAGACTCCTCTCTTGGCCAAACCCGGTAGTGAACTTATCCCTAAGAGGTTCGTCCACCGGATTATCAGTTTTGACGATGTTAAGCTGGTGAAAAACGCAATGAAAATGACGGTGAACGATGTTCTTCTTGGAGTAACGCAAGCCGGACTTTCGCGTTACCTTAGTCGAAAATATGATCAAGAAGCAACACCGAAATCGAAAGAGTCCATGAGGAGAATCCGACTTCGTTCAGCCATTATGATTAACTTGAGACCAAACGCAGGAATTGAGGCTCTAGCGGATATGATGGCCAAGAAATCAAAATGCAGATGGGGAAATCTCTTCGGCTACATTCTCCTACCGTTCTCCGTTGGGCTAGAGACCGATCCTCTAGAATACGTGCGCCAAGCTAAAGCCACGATTGACCGCAAGAAACACTCTCTAGAAGCCGTATTCTCCATGGCATTCTTTAAATTGATACTAAAAGTTCTTGGGCTCAAGGCAAGTGTAGTTCTTGTAAGGAAAGTGATCCATAGCACAACGTTATCATTTTCAAATGTGGTCGGTCCAAAGGAAGAAATTACATTCCATGGTCACCCACTGAATTATATCTCCCCATGTGTTTTTGGCCACCCACATGCTCTTACTCTACATTTCCAGACCTACGCGAACAAGGTCATAATATCGGTAACGGCTGATCCAACGGTCATTCCTGACCCTCACAAGATGTGTGATGATTTGGTGGAGTCTCTCAAGATGATTAAAGCCGCTGTTCTTGAAAGAGGGTTATATGAGATTGAGGTCTAA

Protein Analysis

486

Amino Acids

54.85

Weight (kDa)

9.07

Isoelectric Point (pI)

38.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WS_DGAT_cat PF03007 72 - 266 2.3e-12 Wax ester synthase/diacylglycerol acyltransferase catalytic domain
WS_DGAT_C PF06974 329 - 473 5.3e-52 WS/DGAT C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 3 cut(s) 223, 829, 1322
AccIII TCCGGA 1 cut(s) 295
AciI CCGC 7 cut(s) 221, 481, 518, 555, 953, 1081, 1422
AclI AACGTT 1 cut(s) 1196
AclWI GGATC 8 cut(s) 121, 272, 285, 306, 418, 1034, 1177, 1346
AcoI YGGCCR 3 cut(s) 690, 963, 1282
AcyI GRCGYC 1 cut(s) 384
AfaI GTAC 1 cut(s) 478
AfiI CCNNNNNNNGG 1 cut(s) 935
AgsI TTSAA 8 cut(s) 73, 158, 290, 311, 565, 619, 1209, 1433
AloI GAACNNNNNNTCC 2 cut(s) 389, 421
AluBI AGCT 3 cut(s) 546, 760, 1064
AluI AGCT 3 cut(s) 546, 760, 1064
Alw26I GTCTC 8 cut(s) 23, 123, 456, 465, 671, 919, 1028, 1407
AlwI GGATC 8 cut(s) 121, 272, 285, 306, 418, 1034, 1177, 1346
Ama87I CYCGRG 1 cut(s) 497
Aor13HI TCCGGA 1 cut(s) 295
AoxI GGCC 4 cut(s) 151, 690, 963, 1282
ApeKI GCWGC 1 cut(s) 546
AspLEI GCGC 1 cut(s) 1059
AspS9I GGNCC 2 cut(s) 539, 1220
AsuC2I CCSGG 1 cut(s) 699
AsuHPI GGTGA 5 cut(s) 17, 452, 775, 799, 1241
AvaI CYCGRG 1 cut(s) 497
AvaII GGWCC 2 cut(s) 539, 1220
BalI TGGCCA 3 cut(s) 692, 965, 1284
BamHI GGATCC 1 cut(s) 277
BanII GRGCYC 2 cut(s) 594, 1152
BbsI GAAGAC 3 cut(s) 15, 23, 318
BbvI GCAGC 1 cut(s) 533
BccI CCATC 5 cut(s) 149, 435, 437, 955, 978
BceAI ACGGC 5 cut(s) 36, 80, 166, 1088, 1362
BciVI GTATCC 1 cut(s) 664
BclI TGATCA 1 cut(s) 850
BcnI CCSGG 1 cut(s) 699
BcoDI GTCTC 8 cut(s) 23, 123, 456, 465, 671, 919, 1028, 1407
BfaI CTAG 6 cut(s) 189, 380, 950, 1031, 1046, 1097
BfuI GTATCC 1 cut(s) 664
BisI GCNGC 3 cut(s) 221, 547, 1422
BlsI GCNGC 3 cut(s) 222, 548, 1423
Bme1390I CCNGG 1 cut(s) 699
Bme18I GGWCC 2 cut(s) 539, 1220
BmeT110I CYCGRG 1 cut(s) 497
BmgT120I GGNCC 2 cut(s) 539, 1220
BmiI GGNNCC 2 cut(s) 45, 279
BmrFI CCNGG 1 cut(s) 699
BpiI GAAGAC 3 cut(s) 15, 23, 318
BpuEI CTTGAG 5 cut(s) 404, 685, 943, 1136, 1391
BpuMI CCSGG 1 cut(s) 699
BsaAI YACGTR 1 cut(s) 1054
BsaBI GATNNNNATC 2 cut(s) 276, 303
BsaHI GRCGYC 1 cut(s) 384
BsaI GGTCTC 2 cut(s) 919, 1028
BsaJI CCNNGG 4 cut(s) 148, 498, 1113, 1243
BsaWI WCCGGW 2 cut(s) 295, 732
BsaXI ACNNNNNCTCC 2 cut(s) 664, 694
Bsc4I CCNNNNNNNGG 1 cut(s) 935
Bse1I ACTGG 1 cut(s) 474
Bse3DI GCAATG 1 cut(s) 780
Bse8I GATNNNNATC 2 cut(s) 276, 303
BseAI TCCGGA 1 cut(s) 295
BseDI CCNNGG 4 cut(s) 148, 498, 1113, 1243
BseGI GGATG 2 cut(s) 144, 600
BseJI GATNNNNATC 2 cut(s) 276, 303
BseLI CCNNNNNNNGG 1 cut(s) 935
BseMI GCAATG 1 cut(s) 780
BseNI ACTGG 1 cut(s) 474
BseRI GAGGAG 3 cut(s) 53, 672, 901
BseXI GCAGC 1 cut(s) 533
Bsh1236I CGCG 3 cut(s) 223, 829, 1322
BshFI GGCC 4 cut(s) 153, 692, 965, 1284
BsiHKCI CYCGRG 1 cut(s) 497
BsiSI CCGG 5 cut(s) 80, 296, 699, 733, 819
BslI CCNNNNNNNGG 1 cut(s) 935
BsmAI GTCTC 8 cut(s) 23, 123, 456, 465, 671, 919, 1028, 1407
BsmBI CGTCTC 1 cut(s) 23
BsmI GAATGC 1 cut(s) 1118
BsnI GGCC 4 cut(s) 153, 692, 965, 1284
Bso31I GGTCTC 2 cut(s) 919, 1028
BsoBI CYCGRG 1 cut(s) 497
Bsp1286I GDGCHC 2 cut(s) 594, 1152
Bsp13I TCCGGA 1 cut(s) 295
Bsp143I GATC 8 cut(s) 113, 277, 298, 423, 850, 1039, 1182, 1351
Bsp19I CCATGG 2 cut(s) 1113, 1243
BspACI CCGC 7 cut(s) 221, 481, 518, 555, 953, 1081, 1422
BspANI GGCC 4 cut(s) 153, 692, 965, 1284
BspEI TCCGGA 1 cut(s) 295
BspFNI CGCG 3 cut(s) 223, 829, 1322
BspLI GGNNCC 2 cut(s) 45, 279
BspPI GGATC 8 cut(s) 121, 272, 285, 306, 418, 1034, 1177, 1346
BspQI GCTCTTC 1 cut(s) 246
BspTNI GGTCTC 2 cut(s) 919, 1028
BsrDI GCAATG 1 cut(s) 780
BsrI ACTGG 1 cut(s) 474
BssECI CCNNGG 4 cut(s) 148, 498, 1113, 1243
BssMI GATC 8 cut(s) 113, 277, 298, 423, 850, 1039, 1182, 1351
BssNI GRCGYC 1 cut(s) 384
BssT1I CCWWGG 2 cut(s) 1113, 1243
Bst4CI ACNGT 6 cut(s) 34, 92, 514, 787, 1017, 1360
Bst6I CTCTTC 2 cut(s) 246, 1001
BstACI GRCGYC 1 cut(s) 384
BstBAI YACGTR 1 cut(s) 1054
BstC8I GCNNGC 1 cut(s) 816
BstDEI CTNAG 5 cut(s) 50, 324, 605, 717, 836
BstDSI CCRYGG 3 cut(s) 148, 1113, 1243
BstEII GGTNACC 1 cut(s) 1247
BstF5I GGATG 2 cut(s) 144, 600
BstFNI CGCG 3 cut(s) 223, 829, 1322
BstHHI GCGC 1 cut(s) 1059
BstKTI GATC 8 cut(s) 116, 280, 301, 426, 853, 1042, 1185, 1354
BstMAI GTCTC 8 cut(s) 23, 123, 456, 465, 671, 919, 1028, 1407
BstMBI GATC 8 cut(s) 113, 277, 298, 423, 850, 1039, 1182, 1351
BstMWI GCNNNNNNNGC 2 cut(s) 189, 552
BstNSI RCATGY 2 cut(s) 260, 1295
BstPI GGTNACC 1 cut(s) 1247
BstSCI CCNGG 1 cut(s) 697
BstUI CGCG 3 cut(s) 223, 829, 1322
BstV1I GCAGC 1 cut(s) 533
BstV2I GAAGAC 3 cut(s) 15, 23, 318
BstX2I RGATCY 3 cut(s) 113, 277, 423
BstXI CCANNNNNNTGG 1 cut(s) 343
BstYI RGATCY 3 cut(s) 113, 277, 423
BsuI GTATCC 1 cut(s) 664
BsuRI GGCC 4 cut(s) 153, 692, 965, 1284
BtgI CCRYGG 3 cut(s) 148, 1113, 1243
BtsCI GGATG 2 cut(s) 144, 600
BtsIMutI CAGTG 1 cut(s) 1253
Cac8I GCNNGC 1 cut(s) 816
CfoI GCGC 1 cut(s) 1059
Cfr13I GGNCC 2 cut(s) 539, 1220
CseI GACGC 1 cut(s) 373
Csp6I GTAC 1 cut(s) 477
CviAII CATG 8 cut(s) 57, 257, 457, 883, 1114, 1244, 1272, 1292
CviQI GTAC 1 cut(s) 477
DdeI CTNAG 5 cut(s) 50, 324, 605, 717, 836
DpnI GATC 8 cut(s) 115, 279, 300, 425, 852, 1041, 1184, 1353
DpnII GATC 8 cut(s) 113, 277, 298, 423, 850, 1039, 1182, 1351
DraI TTTAAA 1 cut(s) 1126
EaeI YGGCCR 3 cut(s) 690, 963, 1282
Eam1104I CTCTTC 2 cut(s) 246, 1001
EarI CTCTTC 2 cut(s) 246, 1001
Eco130I CCWWGG 2 cut(s) 1113, 1243
Eco24I GRGCYC 2 cut(s) 594, 1152
Eco31I GGTCTC 2 cut(s) 919, 1028
Eco32I GATATC 1 cut(s) 634
Eco47I GGWCC 2 cut(s) 539, 1220
Eco88I CYCGRG 1 cut(s) 497
Eco91I GGTNACC 1 cut(s) 1247
EcoO65I GGTNACC 1 cut(s) 1247
EcoRV GATATC 1 cut(s) 634
EcoT14I CCWWGG 2 cut(s) 1113, 1243
EcoT38I GRGCYC 2 cut(s) 594, 1152
ErhI CCWWGG 2 cut(s) 1113, 1243
Esp3I CGTCTC 1 cut(s) 23
FaeI CATG 8 cut(s) 60, 260, 460, 886, 1117, 1247, 1275, 1295
FalI AAGNNNNNCTT 2 cut(s) 807, 839
FatI CATG 8 cut(s) 56, 256, 456, 882, 1113, 1243, 1271, 1291
FauI CCCGC 2 cut(s) 488, 548
FbaI TGATCA 1 cut(s) 850
Fnu4HI GCNGC 3 cut(s) 221, 547, 1422
FokI GGATG 2 cut(s) 131, 587
FriOI GRGCYC 2 cut(s) 594, 1152
Fsp4HI GCNGC 3 cut(s) 221, 547, 1422
FspBI CTAG 6 cut(s) 189, 380, 950, 1031, 1046, 1097
GlaI GCGC 1 cut(s) 1058
GluI GCNGC 3 cut(s) 221, 547, 1422
HaeIII GGCC 4 cut(s) 153, 692, 965, 1284
HapII CCGG 5 cut(s) 80, 296, 699, 733, 819
HgaI GACGC 1 cut(s) 373
HhaI GCGC 1 cut(s) 1059
Hin1I GRCGYC 1 cut(s) 384
Hin1II CATG 8 cut(s) 60, 260, 460, 886, 1117, 1247, 1275, 1295
Hin6I GCGC 1 cut(s) 1057
HinP1I GCGC 1 cut(s) 1057
HincII GTYRAC 1 cut(s) 330
HindII GTYRAC 1 cut(s) 330
HinfI GANTC 5 cut(s) 404, 679, 878, 891, 1400
HpaI GTTAAC 1 cut(s) 330
HpaII CCGG 5 cut(s) 80, 296, 699, 733, 819
HphI GGTGA 5 cut(s) 17, 452, 775, 799, 1241
Hpy166II GTNNAC 6 cut(s) 62, 172, 330, 707, 730, 790
Hpy188I TCNGA 3 cut(s) 234, 493, 896
Hpy8I GTNNAC 6 cut(s) 62, 172, 330, 707, 730, 790
HpyCH4III ACNGT 6 cut(s) 34, 92, 514, 787, 1017, 1360
HpyCH4IV ACGT 2 cut(s) 1053, 1196
HpyCH4V TGCA 4 cut(s) 95, 373, 549, 981
HpyF10VI GCNNNNNNNGC 2 cut(s) 189, 552
HpyF3I CTNAG 5 cut(s) 50, 324, 605, 717, 836
HpySE526I ACGT 2 cut(s) 1053, 1196
Hsp92I GRCGYC 1 cut(s) 384
Hsp92II CATG 8 cut(s) 60, 260, 460, 886, 1117, 1247, 1275, 1295
HspAI GCGC 1 cut(s) 1057
Kpn2I TCCGGA 1 cut(s) 295
Ksp22I TGATCA 1 cut(s) 850
KspAI GTTAAC 1 cut(s) 330
Kzo9I GATC 8 cut(s) 113, 277, 298, 423, 850, 1039, 1182, 1351
LguI GCTCTTC 1 cut(s) 246
Lsp1109I GCAGC 1 cut(s) 533
MaeI CTAG 6 cut(s) 189, 380, 950, 1031, 1046, 1097
MaeII ACGT 2 cut(s) 1053, 1196
MaeIII GTNAC 5 cut(s) 103, 808, 830, 1247, 1342
MalI GATC 8 cut(s) 115, 279, 300, 425, 852, 1041, 1184, 1353
MboI GATC 8 cut(s) 113, 277, 298, 423, 850, 1039, 1182, 1351
MboII GAAGA 8 cut(s) 20, 28, 226, 263, 323, 791, 988, 1241
MflI RGATCY 3 cut(s) 113, 277, 423
MhlI GDGCHC 2 cut(s) 594, 1152
MlsI TGGCCA 3 cut(s) 692, 965, 1284
MluCI AATT 5 cut(s) 73, 939, 1127, 1233, 1258
MluNI TGGCCA 3 cut(s) 692, 965, 1284
MlyI GAGTC 3 cut(s) 673, 887, 1409
MmeI TCCRAC 2 cut(s) 919, 1379
Mox20I TGGCCA 3 cut(s) 692, 965, 1284
MroI TCCGGA 1 cut(s) 295
MscI TGGCCA 3 cut(s) 692, 965, 1284
MseI TTAA 9 cut(s) 87, 123, 243, 329, 638, 756, 918, 1125, 1416
MslI CAYNNNNRTG 2 cut(s) 341, 1290
Msp20I TGGCCA 3 cut(s) 692, 965, 1284
MspA1I CMGCKG 2 cut(s) 555, 1424
MspI CCGG 5 cut(s) 80, 296, 699, 733, 819
MspR9I CCNGG 1 cut(s) 699
Mva1269I GAATGC 1 cut(s) 1118
MvnI CGCG 3 cut(s) 223, 829, 1322
MwoI GCNNNNNNNGC 2 cut(s) 189, 552
NciI CCSGG 1 cut(s) 699
NcoI CCATGG 2 cut(s) 1113, 1243
NdeII GATC 8 cut(s) 113, 277, 298, 423, 850, 1039, 1182, 1351
NlaIII CATG 8 cut(s) 60, 260, 460, 886, 1117, 1247, 1275, 1295
NlaIV GGNNCC 2 cut(s) 45, 279
NmuCI GTSAC 1 cut(s) 1247
NspI RCATGY 2 cut(s) 260, 1295
PciSI GCTCTTC 1 cut(s) 246
PctI GAATGC 1 cut(s) 1118
PfeI GAWTC 2 cut(s) 404, 891
PkrI GCNGC 3 cut(s) 222, 548, 1423
PleI GAGTC 3 cut(s) 673, 886, 1408
PpsI GAGTC 3 cut(s) 673, 886, 1408
Ppu21I YACGTR 1 cut(s) 1054
Psp1406I AACGTT 1 cut(s) 1196
PspEI GGTNACC 1 cut(s) 1247
PspN4I GGNNCC 2 cut(s) 45, 279
PspPI GGNCC 2 cut(s) 539, 1220
PsuI RGATCY 3 cut(s) 113, 277, 423
RsaI GTAC 1 cut(s) 478
RsaNI GTAC 1 cut(s) 477
RseI CAYNNNNRTG 2 cut(s) 341, 1290
SapI GCTCTTC 1 cut(s) 246
SaqAI TTAA 9 cut(s) 87, 123, 243, 329, 638, 756, 918, 1125, 1416
SatI GCNGC 3 cut(s) 221, 547, 1422
Sau3AI GATC 8 cut(s) 113, 277, 298, 423, 850, 1039, 1182, 1351
Sau96I GGNCC 2 cut(s) 539, 1220
SchI GAGTC 3 cut(s) 673, 887, 1409
ScrFI CCNGG 1 cut(s) 699
SduI GDGCHC 2 cut(s) 594, 1152
SinI GGWCC 2 cut(s) 539, 1220
SmiMI CAYNNNNRTG 2 cut(s) 341, 1290
SmlI CTYRAG 5 cut(s) 419, 664, 922, 1151, 1406
SmoI CTYRAG 5 cut(s) 419, 664, 922, 1151, 1406
Sse9I AATT 5 cut(s) 73, 939, 1127, 1233, 1258
SsiI CCGC 7 cut(s) 221, 481, 518, 555, 953, 1081, 1422
SspI AATATT 1 cut(s) 657
SspMI CTAG 6 cut(s) 189, 380, 950, 1031, 1046, 1097
StyD4I CCNGG 1 cut(s) 697
StyI CCWWGG 2 cut(s) 1113, 1243
TaaI ACNGT 6 cut(s) 34, 92, 514, 787, 1017, 1360
TaiI ACGT 2 cut(s) 1056, 1199
TaqI TCGA 3 cut(s) 395, 841, 872
TaqII GACCGA 3 cut(s) 556, 1052, 1208
TasI AATT 5 cut(s) 73, 939, 1127, 1233, 1258
TauI GCSGC 2 cut(s) 223, 1424
TfiI GAWTC 2 cut(s) 404, 891
Tru1I TTAA 9 cut(s) 87, 123, 243, 329, 638, 756, 918, 1125, 1416
Tru9I TTAA 9 cut(s) 87, 123, 243, 329, 638, 756, 918, 1125, 1416
TscAI CASTG 1 cut(s) 1260
TseFI GTSAC 1 cut(s) 1247
TseI GCWGC 1 cut(s) 546
Tsp45I GTSAC 1 cut(s) 1247
TspDTI ATGAA 4 cut(s) 218, 512, 589, 791
TspGWI ACGGA 2 cut(s) 689, 1012
TspRI CASTG 1 cut(s) 1260
VpaK11BI GGWCC 2 cut(s) 539, 1220
XbaI TCTAGA 2 cut(s) 1045, 1096
XceI RCATGY 2 cut(s) 260, 1295
XspI CTAG 6 cut(s) 189, 380, 950, 1031, 1046, 1097
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.