Rorug01G0424500

O-acyltransferase (WSD1-like)

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
52498544 .. 52499213
670 bp
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UTR
Exon/CDS
Intron
Rorug01G0424500.1

Sequence Viewer

Length: 258 bp
ATGGCTCACTTCTTCAACAAGCTTAAAGTACGGTTCAGTTCAGCTTATATATCAAGGAATCTAAATCTAAGCAATTCTGTTAGCATTTTGAAAGCTACCTTTCCTGTGGTGCCAACTATATGGATGGTATATATTGAACTACACATATACTTGCCTTCTACGCTTGAAAGGACCAAGTCTGTATACACCTACATTTACCAAGCTTTACTGCAAAGCATTCATATCTATTATCTCTTCAGAGTTCAGATATCATCATGA

Protein Analysis

85

Amino Acids

10.04

Weight (kDa)

9.85

Isoelectric Point (pI)

58.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 109
AccI GTMKAC 1 cut(s) 183
AcuI CTGAAG 1 cut(s) 220
AfaI GTAC 1 cut(s) 30
AgsI TTSAA 4 cut(s) 16, 91, 137, 167
AluBI AGCT 4 cut(s) 22, 44, 95, 203
AluI AGCT 4 cut(s) 22, 44, 95, 203
AspS9I GGNCC 1 cut(s) 171
AvaII GGWCC 1 cut(s) 171
BanI GGYRCC 1 cut(s) 109
BccI CCATC 1 cut(s) 118
Bme18I GGWCC 1 cut(s) 171
BmgT120I GGNCC 1 cut(s) 171
BmiI GGNNCC 1 cut(s) 111
BseGI GGATG 1 cut(s) 129
BshNI GGYRCC 1 cut(s) 109
BsmI GAATGC 1 cut(s) 216
BspHI TCATGA 1 cut(s) 254
BspLI GGNNCC 1 cut(s) 111
BspT107I GGYRCC 1 cut(s) 109
BssNAI GTATAC 1 cut(s) 184
Bst1107I GTATAC 1 cut(s) 184
Bst4CI ACNGT 1 cut(s) 33
Bst6I CTCTTC 1 cut(s) 239
BstDEI CTNAG 1 cut(s) 68
BstF5I GGATG 1 cut(s) 129
BstMWI GCNNNNNNNGC 1 cut(s) 160
BstXI CCANNNNNNTGG 1 cut(s) 120
BstZ17I GTATAC 1 cut(s) 184
BtsCI GGATG 1 cut(s) 129
CciI TCATGA 1 cut(s) 254
Cfr13I GGNCC 1 cut(s) 171
Csp6I GTAC 1 cut(s) 29
CviAII CATG 1 cut(s) 255
CviJI RGCY 5 cut(s) 5, 22, 44, 95, 203
CviKI_1 RGCY 5 cut(s) 5, 22, 44, 95, 203
CviQI GTAC 1 cut(s) 29
DdeI CTNAG 1 cut(s) 68
Eam1104I CTCTTC 1 cut(s) 239
EarI CTCTTC 1 cut(s) 239
Eco32I GATATC 1 cut(s) 249
Eco47I GGWCC 1 cut(s) 171
Eco57I CTGAAG 1 cut(s) 220
EcoRV GATATC 1 cut(s) 249
FaeI CATG 1 cut(s) 258
FatI CATG 1 cut(s) 254
FblI GTMKAC 1 cut(s) 183
FokI GGATG 1 cut(s) 136
Hin1II CATG 1 cut(s) 258
HindIII AAGCTT 2 cut(s) 20, 201
HinfI GANTC 1 cut(s) 58
Hpy166II GTNNAC 1 cut(s) 184
Hpy188I TCNGA 2 cut(s) 239, 246
Hpy188III TCNNGA 1 cut(s) 255
Hpy8I GTNNAC 1 cut(s) 184
HpyAV CCTTC 1 cut(s) 165
HpyCH4III ACNGT 1 cut(s) 33
HpyCH4V TGCA 1 cut(s) 211
HpyF10VI GCNNNNNNNGC 1 cut(s) 160
HpyF3I CTNAG 1 cut(s) 68
Hsp92II CATG 1 cut(s) 258
LpnPI CCDG 1 cut(s) 117
MboII GAAGA 2 cut(s) 4, 226
MluCI AATT 1 cut(s) 73
MseI TTAA 1 cut(s) 24
Mva1269I GAATGC 1 cut(s) 216
MwoI GCNNNNNNNGC 1 cut(s) 160
NlaIII CATG 1 cut(s) 258
NlaIV GGNNCC 1 cut(s) 111
PagI TCATGA 1 cut(s) 254
PctI GAATGC 1 cut(s) 216
PfeI GAWTC 1 cut(s) 58
PflFI GACNNNGTC 1 cut(s) 175
PspN4I GGNNCC 1 cut(s) 111
PspPI GGNCC 1 cut(s) 171
PsyI GACNNNGTC 1 cut(s) 175
RsaI GTAC 1 cut(s) 30
RsaNI GTAC 1 cut(s) 29
SaqAI TTAA 1 cut(s) 24
Sau96I GGNCC 1 cut(s) 171
SetI ASST 6 cut(s) 24, 46, 97, 101, 191, 205
SgeI CNNG 7 cut(s) 31, 66, 116, 163, 176, 187, 212
SinI GGWCC 1 cut(s) 171
Sse9I AATT 1 cut(s) 73
TaaI ACNGT 1 cut(s) 33
TasI AATT 1 cut(s) 73
TfiI GAWTC 1 cut(s) 58
Tru1I TTAA 1 cut(s) 24
Tru9I TTAA 1 cut(s) 24
TspDTI ATGAA 1 cut(s) 209
Tth111I GACNNNGTC 1 cut(s) 175
VpaK11BI GGWCC 1 cut(s) 171
XmiI GTMKAC 1 cut(s) 183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.