RLG00000003058

O-acyltransferase (WSD1-like)

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
43779038 .. 43781765
2728 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003058

Sequence Viewer

Length: 1359 bp
ATGGATGTAAGGCGAAGAAAAAATGGCCAGAACGAGCCTACTTGCAATCGAAAACACGAAAATGGAGCATGTGATGATGATTTATTAACCAATAAAGATCATCAGTTAATTCTAAGCCCGGCAGCACGTTTGTTTCATTCACCAAAATTCAATTGTTATGTTGTTGTAAGAATAGGCATCAAAACTAGAATCAATCCGGAAGTTATTAGAGCTGGCTTGAAGGAAAACTTTCCTAACCATCCTCGCTTCTCTAGCAAACTGGATAAAATATTAGGTGGAAAAAAGAGATGGGAACGAGTTTCAGTAAAAATTGAAGACCATGTCATTGTCCCAGACTTGGATTCGGAGATGAAGCATGCTGAACAGTTTGTTGACCAGTACATTTCCAACCTTAGCACAGGCCCTCTTGACCTTTCCAAGCCACTATGGGAAGTCCATATCCTCAATGTCAAAACCTCTGATGCAGAAGCTGTTGCAGTGATTCGGATTCACCACTCGATGGGGGATGGGGCATCCCTCATGTCACTTCTACTAGCTTGTCCACCTGAGGTGGAGTTTACTATCAAGCGCTTCTTGCACCGAACGATTAGTTTGGATCACATCAAGCAAGTGAAGAATGCTTTGAACATGACCATCAACGATGTTATATTGGGAGTGACACAAGCAGGTTTGTCGCGGTATTTGAACAGCAGATATGGTGAAGATGAGAAGGATGACGAAGCAAAGCAGAAGGGACACAATAATCTTCCAAAAATCATTCGCCTTAGAGCAAATGTTCTCATGAATTTACGACCAGCTGTTGGGATCCAGGATCTGGCAGATATGATGGCTAAGAAGTCCAAGACCAAGTGGGGTAATAAAATTGGATATGTCCTTCTCCCCTTCACCATTGCTCTACAAGATGACCCTTTGGACTATGCAGCTGGAGCAGTAACACTAACACACAGAGTTCTTTCTAATTCCACACTATCATTCTCAAGCCTGATTGGTGTTGAAGAAATTACTTATTACGACCATCAAGTTAAATATATTGCTTCTAATGTTTACGGACACCCACAGGTAGGTTCTATCTGTGCATTAGTTTCATATGCTACTGATTTAGACCACATGATAAACAAGATTCTCATTGTTTTATGCTCTAAACTTTTGCTCCTTCTTGGTGGTAGGCGGCGCATTTTGCATTTTCAAAGCTCTGCTGACAAAATGACTATCTGCCTAGGCGTCGACCCGGATGTATACCCTGATCCTGAAAAGTTGTTGGATGATTTAGAGGATTCACTCAAACTCATGCCCGATGCAGTTGTTGACAATAAGGGGCTCCCCATTGCCAGGGAAGAAGCTGTGTCTCAGGCTAAATGA

Protein Analysis

453

Amino Acids

50.66

Weight (kDa)

8.05

Isoelectric Point (pI)

42.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WS_DGAT_cat PF03007 74 - 177 4.1e-08 Wax ester synthase/diacylglycerol acyltransferase catalytic domain
WS_DGAT_C PF06974 310 - 368 5.8e-07 WS/DGAT C-terminal domain
WS_DGAT_C PF06974 392 - 430 2e-07 WS/DGAT C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 656
AccB7I CCANNNNNTGG 3 cut(s) 499, 800, 814
AccI GTMKAC 2 cut(s) 1224, 1236
AccII CGCG 1 cut(s) 676
AccIII TCCGGA 1 cut(s) 196
AciI CCGC 2 cut(s) 676, 1168
AclWI GGATC 5 cut(s) 603, 799, 812, 819, 1238
AcoI YGGCCR 1 cut(s) 25
AcsI RAATTY 2 cut(s) 146, 784
AcyI GRCGYC 1 cut(s) 1221
AfaI GTAC 1 cut(s) 380
AfeI AGCGCT 1 cut(s) 569
AfiI CCNNNNNNNGG 6 cut(s) 337, 499, 800, 814, 1061, 1329
AgsI TTSAA 7 cut(s) 151, 220, 314, 625, 685, 995, 1187
AjnI CCWGG 2 cut(s) 807, 1328
AluBI AGCT 7 cut(s) 212, 470, 536, 797, 923, 1191, 1340
AluI AGCT 7 cut(s) 212, 470, 536, 797, 923, 1191, 1340
Alw26I GTCTC 1 cut(s) 1350
AlwI GGATC 5 cut(s) 603, 799, 812, 819, 1238
AlwNI CAGNNNCTG 2 cut(s) 470, 814
Aor13HI TCCGGA 1 cut(s) 196
Aor51HI AGCGCT 1 cut(s) 569
AoxI GGCC 2 cut(s) 25, 400
ApeKI GCWGC 2 cut(s) 122, 920
ApoI RAATTY 2 cut(s) 146, 784
Asp700I GAANNNNTTC 1 cut(s) 228
AspA2I CCTAGG 1 cut(s) 1216
AspLEI GCGC 2 cut(s) 570, 1173
AspS9I GGNCC 1 cut(s) 401
AsuC2I CCSGG 2 cut(s) 119, 1229
AsuHPI GGTGA 4 cut(s) 132, 482, 710, 877
AvrII CCTAGG 1 cut(s) 1216
AxyI CCTNAGG 1 cut(s) 546
BalI TGGCCA 1 cut(s) 27
BamHI GGATCC 1 cut(s) 804
BanII GRGCYC 1 cut(s) 1320
BbsI GAAGAC 1 cut(s) 321
BbvI GCAGC 2 cut(s) 134, 932
BccI CCATC 7 cut(s) 246, 282, 493, 500, 641, 820, 1023
BcgI CGANNNNNNTGC 2 cut(s) 654, 688
BciT130I CCWGG 2 cut(s) 809, 1330
BcnI CCSGG 2 cut(s) 119, 1229
BcoDI GTCTC 1 cut(s) 1350
BfaI CTAG 4 cut(s) 186, 252, 533, 1217
BfoI RGCGCY 1 cut(s) 571
BfuAI ACCTGC 1 cut(s) 656
BisI GCNGC 3 cut(s) 123, 921, 1169
BlnI CCTAGG 1 cut(s) 1216
BlsI GCNGC 3 cut(s) 124, 922, 1170
Bme1390I CCNGG 4 cut(s) 119, 809, 1229, 1330
BmgT120I GGNCC 1 cut(s) 401
BmiI GGNNCC 2 cut(s) 806, 1319
BmrFI CCNGG 4 cut(s) 119, 809, 1229, 1330
BmsI GCATC 4 cut(s) 186, 451, 521, 1285
BpiI GAAGAC 1 cut(s) 321
BpmI CTGGAG 1 cut(s) 945
Bpu10I CCTNAGC 1 cut(s) 392
BpuEI CTTGAG 1 cut(s) 961
BpuMI CCSGG 2 cut(s) 119, 1229
BsaHI GRCGYC 1 cut(s) 1221
BsaJI CCNNGG 2 cut(s) 1216, 1329
BsaWI WCCGGW 1 cut(s) 196
BsaXI ACNNNNNCTCC 2 cut(s) 1134, 1164
Bsc4I CCNNNNNNNGG 6 cut(s) 337, 499, 800, 814, 1061, 1329
Bse1I ACTGG 2 cut(s) 264, 376
Bse21I CCTNAGG 1 cut(s) 546
Bse3DI GCAATG 2 cut(s) 888, 1323
BseAI TCCGGA 1 cut(s) 196
BseBI CCWGG 2 cut(s) 809, 1330
BseDI CCNNGG 2 cut(s) 1216, 1329
BseGI GGATG 7 cut(s) 10, 238, 511, 512, 718, 1237, 1267
BseLI CCNNNNNNNGG 6 cut(s) 337, 499, 800, 814, 1061, 1329
BseMI GCAATG 2 cut(s) 888, 1323
BseMII CTCAG 1 cut(s) 537
BseNI ACTGG 2 cut(s) 264, 376
BseXI GCAGC 2 cut(s) 134, 932
Bsh1236I CGCG 1 cut(s) 676
BshFI GGCC 2 cut(s) 27, 402
BsiSI CCGG 3 cut(s) 119, 197, 1229
BslFI GGGAC 2 cut(s) 314, 747
BslI CCNNNNNNNGG 6 cut(s) 337, 499, 800, 814, 1061, 1329
BsmAI GTCTC 1 cut(s) 1350
BsmFI GGGAC 2 cut(s) 314, 747
BsmI GAATGC 1 cut(s) 622
BsnI GGCC 2 cut(s) 27, 402
Bsp1286I GDGCHC 1 cut(s) 1320
Bsp13I TCCGGA 1 cut(s) 196
Bsp143I GATC 5 cut(s) 97, 595, 804, 811, 1243
BspACI CCGC 2 cut(s) 676, 1168
BspANI GGCC 2 cut(s) 27, 402
BspCNI CTCAG 1 cut(s) 538
BspEI TCCGGA 1 cut(s) 196
BspFNI CGCG 1 cut(s) 676
BspHI TCATGA 1 cut(s) 780
BspLI GGNNCC 2 cut(s) 806, 1319
BspMI ACCTGC 1 cut(s) 656
BspPI GGATC 5 cut(s) 603, 799, 812, 819, 1238
BsrDI GCAATG 2 cut(s) 888, 1323
BsrI ACTGG 2 cut(s) 264, 376
BssECI CCNNGG 2 cut(s) 1216, 1329
BssMI GATC 5 cut(s) 97, 595, 804, 811, 1243
BssNAI GTATAC 1 cut(s) 1237
BssNI GRCGYC 1 cut(s) 1221
BssT1I CCWWGG 1 cut(s) 1216
Bst1107I GTATAC 1 cut(s) 1237
Bst2UI CCWGG 2 cut(s) 809, 1330
Bst4CI ACNGT 1 cut(s) 366
BstACI GRCGYC 1 cut(s) 1221
BstC8I GCNNGC 2 cut(s) 214, 357
BstDEI CTNAG 6 cut(s) 113, 392, 546, 764, 831, 1347
BstF5I GGATG 7 cut(s) 10, 238, 511, 512, 718, 1237, 1267
BstFNI CGCG 1 cut(s) 676
BstH2I RGCGCY 1 cut(s) 571
BstHHI GCGC 2 cut(s) 570, 1173
BstKTI GATC 5 cut(s) 100, 598, 807, 814, 1246
BstMAI GTCTC 1 cut(s) 1350
BstMBI GATC 5 cut(s) 97, 595, 804, 811, 1243
BstMWI GCNNNNNNNGC 4 cut(s) 252, 574, 926, 1177
BstNI CCWGG 2 cut(s) 809, 1330
BstNSI RCATGY 2 cut(s) 72, 359
BstSCI CCNGG 4 cut(s) 117, 807, 1227, 1328
BstUI CGCG 1 cut(s) 676
BstV1I GCAGC 2 cut(s) 134, 932
BstV2I GAAGAC 1 cut(s) 321
BstX2I RGATCY 2 cut(s) 804, 811
BstYI RGATCY 2 cut(s) 804, 811
BstZ17I GTATAC 1 cut(s) 1237
Bsu36I CCTNAGG 1 cut(s) 546
BsuRI GGCC 2 cut(s) 27, 402
BtsCI GGATG 7 cut(s) 10, 238, 511, 512, 718, 1237, 1267
BtsI GCAGTG 1 cut(s) 483
BtsIMutI CAGTG 1 cut(s) 483
BveI ACCTGC 1 cut(s) 656
Cac8I GCNNGC 2 cut(s) 214, 357
CaiI CAGNNNCTG 2 cut(s) 470, 814
CciI TCATGA 1 cut(s) 780
CfoI GCGC 2 cut(s) 570, 1173
Cfr13I GGNCC 1 cut(s) 401
CseI GACGC 1 cut(s) 1210
Csp6I GTAC 1 cut(s) 379
CviAII CATG 8 cut(s) 69, 320, 356, 520, 628, 781, 1108, 1288
CviQI GTAC 1 cut(s) 379
DdeI CTNAG 6 cut(s) 113, 392, 546, 764, 831, 1347
DpnI GATC 5 cut(s) 99, 597, 806, 813, 1245
DpnII GATC 5 cut(s) 97, 595, 804, 811, 1243
EaeI YGGCCR 1 cut(s) 25
Eco130I CCWWGG 1 cut(s) 1216
Eco24I GRGCYC 1 cut(s) 1320
Eco47III AGCGCT 1 cut(s) 569
Eco81I CCTNAGG 1 cut(s) 546
EcoO109I RGGNCCY 1 cut(s) 401
EcoRII CCWGG 2 cut(s) 807, 1328
EcoT14I CCWWGG 1 cut(s) 1216
EcoT38I GRGCYC 1 cut(s) 1320
ErhI CCWWGG 1 cut(s) 1216
FaeI CATG 8 cut(s) 72, 323, 359, 523, 631, 784, 1111, 1291
FalI AAGNNNNNCTT 4 cut(s) 212, 244, 557, 589
FaqI GGGAC 2 cut(s) 314, 747
FatI CATG 8 cut(s) 68, 319, 355, 519, 627, 780, 1107, 1287
FauNDI CATATG 1 cut(s) 1087
FblI GTMKAC 2 cut(s) 1224, 1236
Fnu4HI GCNGC 3 cut(s) 123, 921, 1169
FokI GGATG 7 cut(s) 17, 225, 499, 518, 725, 1244, 1274
FriOI GRGCYC 1 cut(s) 1320
Fsp4HI GCNGC 3 cut(s) 123, 921, 1169
FspBI CTAG 4 cut(s) 186, 252, 533, 1217
GlaI GCGC 2 cut(s) 569, 1172
GluI GCNGC 3 cut(s) 123, 921, 1169
GsuI CTGGAG 1 cut(s) 945
HaeII RGCGCY 1 cut(s) 571
HaeIII GGCC 2 cut(s) 27, 402
HapII CCGG 3 cut(s) 119, 197, 1229
HgaI GACGC 1 cut(s) 1210
HhaI GCGC 2 cut(s) 570, 1173
Hin1I GRCGYC 1 cut(s) 1221
Hin1II CATG 8 cut(s) 72, 323, 359, 523, 631, 784, 1111, 1291
Hin6I GCGC 2 cut(s) 568, 1171
HinP1I GCGC 2 cut(s) 568, 1171
HincII GTYRAC 3 cut(s) 373, 1225, 1306
HindII GTYRAC 3 cut(s) 373, 1225, 1306
HinfI GANTC 6 cut(s) 189, 341, 481, 487, 1120, 1274
HpaII CCGG 3 cut(s) 119, 197, 1229
HphI GGTGA 4 cut(s) 132, 482, 710, 877
Hpy166II GTNNAC 7 cut(s) 373, 542, 558, 1045, 1225, 1237, 1306
Hpy188I TCNGA 3 cut(s) 346, 460, 486
Hpy188III TCNNGA 4 cut(s) 197, 407, 781, 1247
Hpy8I GTNNAC 7 cut(s) 373, 542, 558, 1045, 1225, 1237, 1306
Hpy99I CGWCG 1 cut(s) 1226
HpyAV CCTTC 6 cut(s) 214, 703, 724, 884, 892, 1163
HpyCH4III ACNGT 1 cut(s) 366
HpyCH4IV ACGT 1 cut(s) 127
HpyCH4V TGCA 8 cut(s) 45, 464, 476, 577, 920, 1076, 1180, 1298
HpyF10VI GCNNNNNNNGC 4 cut(s) 252, 574, 926, 1177
HpyF3I CTNAG 6 cut(s) 113, 392, 546, 764, 831, 1347
HpySE526I ACGT 1 cut(s) 127
Hsp92I GRCGYC 1 cut(s) 1221
Hsp92II CATG 8 cut(s) 72, 323, 359, 523, 631, 784, 1111, 1291
HspAI GCGC 2 cut(s) 568, 1171
Kpn2I TCCGGA 1 cut(s) 196
Kzo9I GATC 5 cut(s) 97, 595, 804, 811, 1243
LmnI GCTCC 4 cut(s) 65, 926, 1155, 1323
Lsp1109I GCAGC 2 cut(s) 134, 932
LweI GCATC 4 cut(s) 186, 451, 521, 1285
MaeI CTAG 4 cut(s) 186, 252, 533, 1217
MaeII ACGT 1 cut(s) 127
MaeIII GTNAC 3 cut(s) 522, 655, 931
MalI GATC 5 cut(s) 99, 597, 806, 813, 1245
MboI GATC 5 cut(s) 97, 595, 804, 811, 1243
MboII GAAGA 7 cut(s) 27, 326, 625, 713, 737, 1007, 1346
MfeI CAATTG 1 cut(s) 151
MflI RGATCY 2 cut(s) 804, 811
MhlI GDGCHC 1 cut(s) 1320
MlsI TGGCCA 1 cut(s) 27
MluCI AATT 8 cut(s) 108, 146, 151, 309, 784, 861, 958, 999
MluNI TGGCCA 1 cut(s) 27
MmeI TCCRAC 2 cut(s) 411, 1239
MnlI CCTC 7 cut(s) 252, 414, 452, 466, 527, 541, 1264
Mox20I TGGCCA 1 cut(s) 27
MroI TCCGGA 1 cut(s) 196
MroXI GAANNNNTTC 1 cut(s) 228
MscI TGGCCA 1 cut(s) 27
MseI TTAA 3 cut(s) 86, 107, 1023
MslI CAYNNNNRTG 1 cut(s) 60
Msp20I TGGCCA 1 cut(s) 27
MspA1I CMGCKG 2 cut(s) 797, 923
MspI CCGG 3 cut(s) 119, 197, 1229
MspR9I CCNGG 4 cut(s) 119, 809, 1229, 1330
MunI CAATTG 1 cut(s) 151
Mva1269I GAATGC 1 cut(s) 622
MvaI CCWGG 2 cut(s) 809, 1330
MvnI CGCG 1 cut(s) 676
MwoI GCNNNNNNNGC 4 cut(s) 252, 574, 926, 1177
NciI CCSGG 2 cut(s) 119, 1229
NdeI CATATG 1 cut(s) 1087
NdeII GATC 5 cut(s) 97, 595, 804, 811, 1243
NlaIII CATG 8 cut(s) 72, 323, 359, 523, 631, 784, 1111, 1291
NlaIV GGNNCC 2 cut(s) 806, 1319
NmuCI GTSAC 2 cut(s) 522, 655
NspI RCATGY 2 cut(s) 72, 359
PaeI GCATGC 1 cut(s) 359
PagI TCATGA 1 cut(s) 780
PctI GAATGC 1 cut(s) 622
PdmI GAANNNNTTC 1 cut(s) 228
PfeI GAWTC 6 cut(s) 189, 341, 481, 487, 1120, 1274
PflFI GACNNNGTC 1 cut(s) 320
PflMI CCANNNNNTGG 3 cut(s) 499, 800, 814
PfoI TCCNGGA 1 cut(s) 807
PkrI GCNGC 3 cut(s) 124, 922, 1170
Psp6I CCWGG 2 cut(s) 807, 1328
PspGI CCWGG 2 cut(s) 807, 1328
PspN4I GGNNCC 2 cut(s) 806, 1319
PspPI GGNCC 1 cut(s) 401
PstNI CAGNNNCTG 2 cut(s) 470, 814
PsuI RGATCY 2 cut(s) 804, 811
PsyI GACNNNGTC 1 cut(s) 320
PvuII CAGCTG 2 cut(s) 797, 923
RsaI GTAC 1 cut(s) 380
RsaNI GTAC 1 cut(s) 379
RseI CAYNNNNRTG 1 cut(s) 60
SalI GTCGAC 1 cut(s) 1223
SaqAI TTAA 3 cut(s) 86, 107, 1023
SatI GCNGC 3 cut(s) 123, 921, 1169
Sau3AI GATC 5 cut(s) 97, 595, 804, 811, 1243
Sau96I GGNCC 1 cut(s) 401
ScrFI CCNGG 4 cut(s) 119, 809, 1229, 1330
SduI GDGCHC 1 cut(s) 1320
SfaNI GCATC 4 cut(s) 186, 451, 521, 1285
SmiMI CAYNNNNRTG 1 cut(s) 60
SmlI CTYRAG 1 cut(s) 976
SmoI CTYRAG 1 cut(s) 976
SphI GCATGC 1 cut(s) 359
Sse9I AATT 8 cut(s) 108, 146, 151, 309, 784, 861, 958, 999
SsiI CCGC 2 cut(s) 676, 1168
SspI AATATT 1 cut(s) 270
SspMI CTAG 4 cut(s) 186, 252, 533, 1217
StyD4I CCNGG 4 cut(s) 117, 807, 1227, 1328
StyI CCWWGG 1 cut(s) 1216
TaaI ACNGT 1 cut(s) 366
TaiI ACGT 1 cut(s) 130
TaqI TCGA 3 cut(s) 49, 497, 1224
TasI AATT 8 cut(s) 108, 146, 151, 309, 784, 861, 958, 999
TatI WGTACW 1 cut(s) 378
TauI GCSGC 1 cut(s) 1171
TfiI GAWTC 6 cut(s) 189, 341, 481, 487, 1120, 1274
Tru1I TTAA 3 cut(s) 86, 107, 1023
Tru9I TTAA 3 cut(s) 86, 107, 1023
TscAI CASTG 1 cut(s) 483
TseFI GTSAC 2 cut(s) 522, 655
TseI GCWGC 2 cut(s) 122, 920
Tsp45I GTSAC 2 cut(s) 522, 655
TspDTI ATGAA 4 cut(s) 125, 365, 797, 1074
TspGWI ACGGA 1 cut(s) 1062
TspRI CASTG 1 cut(s) 483
Tth111I GACNNNGTC 1 cut(s) 320
Van91I CCANNNNNTGG 3 cut(s) 499, 800, 814
XapI RAATTY 2 cut(s) 146, 784
XceI RCATGY 2 cut(s) 72, 359
XmaJI CCTAGG 1 cut(s) 1216
XmiI GTMKAC 2 cut(s) 1224, 1236
XmnI GAANNNNTTC 1 cut(s) 228
XspI CTAG 4 cut(s) 186, 252, 533, 1217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.