RLG00000026272

O-acyltransferase (WSD1-like)

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
1805735 .. 1809378
3644 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026272

Sequence Viewer

Length: 1386 bp
ATGAATGGAGGTGCGGGGAATCGAACCCCGTGCCTCTCGCATGCGAAGCGAGCGCTCTACCATATGAGCTACACCCCCAATTACTGCATCAGGATCAATCCTGAAGTAATCAGCGCCGGCTTGAAGGAAACCTTGTATAAGCATCCTCCCTTCTCTAGCAAAATGTTCCCCAGAACCCCACATTTTAAACGTCGCATGGTTGAAGTCATGGATGTAAAGAGAAGAAAAGATGGAAAATACAAGAGACCTACAAGTAATCCAAAACACAAAATTGGAGAATGTCATGATGAATACTTATTCTCTAATGAAGATCCAAAGCCTAATTCTAAGCTCGGCATCAGTTTGTTTCATTCACCGAAATTCAGCTGTTACATTGTTTTAGGAATAGGCAGCAAGACAAGAATCAATCTGGAAGTTGTTAAAGCCGGCTTGAAGCAAAACTTACCTGATCATCCTTGCTTCTCTAGCATAATGGATAAAAAATTATGTGGTAAAAAGATATGGATACAATTTTCAATAAATTTGGAGGACCATGTTATTGTTCCAAACATGGATTCAGATATGGAGGATGAAGACCAGTTTGTTAGAGACTACATTTCGCGCCTTACTACAAGCCCTCTTGGCCTTTCCAAGGCACTATCCGTTGGAGTGATTCGGATTCACCACTTGATGGGGGGTGGCGCATCCCTCATGTCATGTCTACTAGGTTGTACCAGAAAAGCATTGGACCCGGATGCATTGCCTAGTGTTCCAACCAAGAGGAAACATGAGGGTAGTTCTTCAAGAACATTGATAGGGAACACTCTTGTTGATCTTGTGCTGTTTGTTGCCACAATTCTGGTTTTGAAAGACACCAAGCCTCCTATTAAAGGTCCACCTGGGGTTGGGCTTACTGGCAAGCGGTTCTTGCATCAAACAGTTAGTTTGGATGACATCAAGCAAGTGAAGAATGCTATGAACATGCCAGTCTCTGATAGATTTTCTTCAGAGTTGAGAATTTCATATGATAATCTGGTGCTGTTTAATGAGTCCAAAGCCCCAATTTGGTCCACAGATGTCAGTTCATATTCAGTTTCTTCTATACGTGTAGTTCTTTTAGATAATGGAAACCTTGTGCTAAGAGCTGGGTCTAATTCATCTTTGCCTTTATGGCAAAGTTTTAATTATCCAGCTCATACCTTGCTACCGGAAGCTAGAATTGGGTTCAACAATGTTACAAACCGAACCCAAGTCCTGACTTCATGGAAGAATTTTGAGGATCCTGCACCGGGTCTTTCTCTGTTGAGCTTAACCCGAATGGAACTGATGCATATTTCATACTGTGGAATAGGTCTAAGAAGTATTGGACTAGTGGAACTTGGGATGCAGAGACTCAGAGAGTCATAG

Protein Analysis

462

Amino Acids

51.46

Weight (kDa)

9.51

Isoelectric Point (pI)

42.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 320 - 416 1.1e-23 D-mannose binding lectin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 670
AccI GTMKAC 1 cut(s) 700
AccII CGCG 1 cut(s) 601
AciI CCGC 2 cut(s) 14, 901
AclWI GGATC 4 cut(s) 101, 305, 1253, 1266
AcsI RAATTY 4 cut(s) 359, 520, 996, 1249
AcuI CTGAAG 2 cut(s) 123, 969
AfaI GTAC 1 cut(s) 712
AfeI AGCGCT 1 cut(s) 54
AfiI CCNNNNNNNGG 6 cut(s) 631, 670, 869, 884, 1044, 1268
AflIII ACRYGT 1 cut(s) 1084
AgsI TTSAA 7 cut(s) 124, 203, 433, 516, 783, 847, 1207
AhlI ACTAGT 1 cut(s) 1348
AjnI CCWGG 1 cut(s) 877
AjuI GAANNNNNNNTTGG 6 cut(s) 307, 339, 538, 570, 1182, 1214
AluBI AGCT 7 cut(s) 69, 331, 366, 1124, 1172, 1193, 1287
AluI AGCT 7 cut(s) 69, 331, 366, 1124, 1172, 1193, 1287
Alw26I GTCTC 4 cut(s) 238, 582, 973, 1363
AlwI GGATC 4 cut(s) 101, 305, 1253, 1266
AlwNI CAGNNNCTG 1 cut(s) 971
Aor51HI AGCGCT 1 cut(s) 54
AoxI GGCC 1 cut(s) 622
ApeKI GCWGC 1 cut(s) 390
ApoI RAATTY 4 cut(s) 359, 520, 996, 1249
AspLEI GCGC 4 cut(s) 55, 116, 603, 683
AspS9I GGNCC 4 cut(s) 529, 727, 872, 1047
AsuC2I CCSGG 2 cut(s) 731, 1269
AsuHPI GGTGA 2 cut(s) 345, 653
AvaII GGWCC 4 cut(s) 529, 727, 872, 1047
BamHI GGATCC 1 cut(s) 1258
BbsI GAAGAC 1 cut(s) 579
BbvI GCAGC 1 cut(s) 402
BccI CCATC 2 cut(s) 224, 664
BcgI CGANNNNNNTGC 2 cut(s) 12, 46
BciT130I CCWGG 1 cut(s) 879
BciVI GTATCC 1 cut(s) 498
BclI TGATCA 1 cut(s) 448
BcnI CCSGG 2 cut(s) 731, 1269
BcoDI GTCTC 4 cut(s) 238, 582, 973, 1363
BcuI ACTAGT 1 cut(s) 1348
BfaI CTAG 6 cut(s) 156, 465, 704, 744, 1194, 1349
BfoI RGCGCY 2 cut(s) 56, 117
BfuI GTATCC 1 cut(s) 498
BglI GCCNNNNNGGC 2 cut(s) 621, 1150
BisI GCNGC 1 cut(s) 391
BlsI GCNGC 1 cut(s) 392
Bme1390I CCNGG 3 cut(s) 731, 879, 1269
Bme18I GGWCC 4 cut(s) 529, 727, 872, 1047
BmgT120I GGNCC 4 cut(s) 529, 727, 872, 1047
BmiI GGNNCC 2 cut(s) 729, 1260
BmrFI CCNGG 3 cut(s) 731, 879, 1269
BmsI GCATC 8 cut(s) 96, 151, 345, 692, 724, 919, 1296, 1353
BpiI GAAGAC 1 cut(s) 579
BpuMI CCSGG 2 cut(s) 731, 1269
BsaAI YACGTR 1 cut(s) 1085
BsaI GGTCTC 1 cut(s) 238
BsaJI CCNNGG 2 cut(s) 630, 878
BsaWI WCCGGW 1 cut(s) 1186
BsaXI ACNNNNNCTCC 2 cut(s) 844, 874
Bsc4I CCNNNNNNNGG 6 cut(s) 631, 670, 869, 884, 1044, 1268
Bse118I RCCGGY 2 cut(s) 116, 425
Bse1I ACTGG 3 cut(s) 577, 898, 965
Bse3DI GCAATG 1 cut(s) 737
BseBI CCWGG 1 cut(s) 879
BseDI CCNNGG 2 cut(s) 630, 878
BseGI GGATG 8 cut(s) 142, 217, 451, 574, 683, 739, 934, 1368
BseLI CCNNNNNNNGG 6 cut(s) 631, 670, 869, 884, 1044, 1268
BseMI GCAATG 1 cut(s) 737
BseNI ACTGG 3 cut(s) 577, 898, 965
BseXI GCAGC 1 cut(s) 402
BseYI CCCAGC 1 cut(s) 1124
BsgI GTGCAG 1 cut(s) 1248
Bsh1236I CGCG 1 cut(s) 601
BshFI GGCC 1 cut(s) 624
BsiSI CCGG 5 cut(s) 117, 426, 731, 1187, 1268
BslI CCNNNNNNNGG 6 cut(s) 631, 670, 869, 884, 1044, 1268
BsmAI GTCTC 4 cut(s) 238, 582, 973, 1363
BsmI GAATGC 1 cut(s) 955
BsnI GGCC 1 cut(s) 624
Bso31I GGTCTC 1 cut(s) 238
Bsp143I GATC 5 cut(s) 93, 310, 448, 811, 1258
BspACI CCGC 2 cut(s) 14, 901
BspANI GGCC 1 cut(s) 624
BspCNI CTCAG 1 cut(s) 1386
BspFNI CGCG 1 cut(s) 601
BspHI TCATGA 1 cut(s) 283
BspLI GGNNCC 2 cut(s) 729, 1260
BspPI GGATC 4 cut(s) 101, 305, 1253, 1266
BspTNI GGTCTC 1 cut(s) 238
BsrDI GCAATG 1 cut(s) 737
BsrFI RCCGGY 2 cut(s) 116, 425
BsrI ACTGG 3 cut(s) 577, 898, 965
BssAI RCCGGY 2 cut(s) 116, 425
BssECI CCNNGG 2 cut(s) 630, 878
BssMI GATC 5 cut(s) 93, 310, 448, 811, 1258
BssT1I CCWWGG 1 cut(s) 630
Bst2UI CCWGG 1 cut(s) 879
Bst4CI ACNGT 2 cut(s) 919, 1322
BstBAI YACGTR 1 cut(s) 1085
BstC8I GCNNGC 5 cut(s) 42, 51, 118, 427, 899
BstDEI CTNAG 4 cut(s) 327, 1118, 1334, 1373
BstENI CCTNNNNNAGG 2 cut(s) 629, 867
BstF5I GGATG 8 cut(s) 142, 217, 451, 574, 683, 739, 934, 1368
BstFNI CGCG 1 cut(s) 601
BstH2I RGCGCY 2 cut(s) 56, 117
BstHHI GCGC 4 cut(s) 55, 116, 603, 683
BstKTI GATC 5 cut(s) 96, 313, 451, 814, 1261
BstMAI GTCTC 4 cut(s) 238, 582, 973, 1363
BstMBI GATC 5 cut(s) 93, 310, 448, 811, 1258
BstMWI GCNNNNNNNGC 6 cut(s) 46, 50, 465, 621, 907, 1150
BstNI CCWGG 1 cut(s) 879
BstNSI RCATGY 2 cut(s) 44, 964
BstSCI CCNGG 3 cut(s) 729, 877, 1267
BstUI CGCG 1 cut(s) 601
BstV1I GCAGC 1 cut(s) 402
BstV2I GAAGAC 1 cut(s) 579
BstX2I RGATCY 2 cut(s) 310, 1258
BstXI CCANNNNNNTGG 1 cut(s) 838
BstYI RGATCY 2 cut(s) 310, 1258
BsuI GTATCC 1 cut(s) 498
BsuRI GGCC 1 cut(s) 624
BtsCI GGATG 8 cut(s) 142, 217, 451, 574, 683, 739, 934, 1368
Cac8I GCNNGC 5 cut(s) 42, 51, 118, 427, 899
CaiI CAGNNNCTG 1 cut(s) 971
CciI TCATGA 1 cut(s) 283
CfoI GCGC 4 cut(s) 55, 116, 603, 683
Cfr10I RCCGGY 2 cut(s) 116, 425
Cfr13I GGNCC 4 cut(s) 529, 727, 872, 1047
Csp6I GTAC 1 cut(s) 711
CviQI GTAC 1 cut(s) 711
DdeI CTNAG 4 cut(s) 327, 1118, 1334, 1373
DpnI GATC 5 cut(s) 95, 312, 450, 813, 1260
DpnII GATC 5 cut(s) 93, 310, 448, 811, 1258
DraI TTTAAA 1 cut(s) 187
Eco130I CCWWGG 1 cut(s) 630
Eco31I GGTCTC 1 cut(s) 238
Eco47I GGWCC 4 cut(s) 529, 727, 872, 1047
Eco47III AGCGCT 1 cut(s) 54
Eco57I CTGAAG 2 cut(s) 123, 969
EcoNI CCTNNNNNAGG 2 cut(s) 629, 867
EcoRII CCWGG 1 cut(s) 877
EcoT14I CCWWGG 1 cut(s) 630
EcoT22I ATGCAT 2 cut(s) 739, 1311
ErhI CCWWGG 1 cut(s) 630
FalI AAGNNNNNCTT 6 cut(s) 116, 148, 425, 457, 890, 922
FauI CCCGC 1 cut(s) 7
FauNDI CATATG 2 cut(s) 63, 1003
FbaI TGATCA 1 cut(s) 448
FblI GTMKAC 1 cut(s) 700
Fnu4HI GCNGC 1 cut(s) 391
FokI GGATG 8 cut(s) 129, 224, 438, 581, 670, 746, 941, 1375
Fsp4HI GCNGC 1 cut(s) 391
FspBI CTAG 6 cut(s) 156, 465, 704, 744, 1194, 1349
GlaI GCGC 4 cut(s) 54, 115, 602, 682
GluI GCNGC 1 cut(s) 391
GsaI CCCAGC 1 cut(s) 1128
HaeII RGCGCY 2 cut(s) 56, 117
HaeIII GGCC 1 cut(s) 624
HapII CCGG 5 cut(s) 117, 426, 731, 1187, 1268
HhaI GCGC 4 cut(s) 55, 116, 603, 683
Hin6I GCGC 4 cut(s) 53, 114, 601, 681
HinP1I GCGC 4 cut(s) 53, 114, 601, 681
HinfI GANTC 8 cut(s) 19, 402, 554, 652, 658, 1028, 1371, 1379
HpaII CCGG 5 cut(s) 117, 426, 731, 1187, 1268
HphI GGTGA 2 cut(s) 345, 653
Hpy166II GTNNAC 3 cut(s) 701, 875, 1050
Hpy188I TCNGA 5 cut(s) 559, 657, 973, 988, 1376
Hpy188III TCNNGA 6 cut(s) 91, 101, 284, 410, 783, 1234
Hpy8I GTNNAC 3 cut(s) 701, 875, 1050
Hpy99I CGWCG 1 cut(s) 195
HpyAV CCTTC 2 cut(s) 118, 160
HpyCH4III ACNGT 2 cut(s) 919, 1322
HpyCH4IV ACGT 2 cut(s) 190, 1084
HpyCH4V TGCA 6 cut(s) 87, 737, 910, 1265, 1309, 1366
HpyF10VI GCNNNNNNNGC 6 cut(s) 46, 50, 465, 621, 907, 1150
HpyF3I CTNAG 4 cut(s) 327, 1118, 1334, 1373
HpySE526I ACGT 2 cut(s) 190, 1084
HspAI GCGC 4 cut(s) 53, 114, 601, 681
KroI GCCGGC 2 cut(s) 116, 425
KroNI GCCGGC 2 cut(s) 118, 427
Ksp22I TGATCA 1 cut(s) 448
Kzo9I GATC 5 cut(s) 93, 310, 448, 811, 1258
Lsp1109I GCAGC 1 cut(s) 402
LweI GCATC 8 cut(s) 96, 151, 345, 692, 724, 919, 1296, 1353
MaeI CTAG 6 cut(s) 156, 465, 704, 744, 1194, 1349
MaeII ACGT 2 cut(s) 190, 1084
MaeIII GTNAC 2 cut(s) 368, 1213
MalI GATC 5 cut(s) 95, 312, 450, 813, 1260
MboI GATC 5 cut(s) 93, 310, 448, 811, 1258
MboII GAAGA 8 cut(s) 234, 320, 584, 771, 958, 975, 1068, 1258
MflI RGATCY 2 cut(s) 310, 1258
MlyI GAGTC 2 cut(s) 1037, 1365
MmeI TCCRAC 2 cut(s) 625, 776
Mph1103I ATGCAT 2 cut(s) 739, 1311
MroNI GCCGGC 2 cut(s) 116, 425
MseI TTAA 6 cut(s) 186, 420, 867, 1023, 1161, 1289
MspA1I CMGCKG 1 cut(s) 366
MspI CCGG 5 cut(s) 117, 426, 731, 1187, 1268
MspR9I CCNGG 3 cut(s) 731, 879, 1269
Mva1269I GAATGC 1 cut(s) 955
MvaI CCWGG 1 cut(s) 879
MvnI CGCG 1 cut(s) 601
MwoI GCNNNNNNNGC 6 cut(s) 46, 50, 465, 621, 907, 1150
NaeI GCCGGC 2 cut(s) 118, 427
NciI CCSGG 2 cut(s) 731, 1269
NdeI CATATG 2 cut(s) 63, 1003
NdeII GATC 5 cut(s) 93, 310, 448, 811, 1258
NgoMIV GCCGGC 2 cut(s) 116, 425
NlaIV GGNNCC 2 cut(s) 729, 1260
NmeAIII GCCGAG 1 cut(s) 312
NsiI ATGCAT 2 cut(s) 739, 1311
NspI RCATGY 2 cut(s) 44, 964
PaeI GCATGC 1 cut(s) 44
PagI TCATGA 1 cut(s) 283
PctI GAATGC 1 cut(s) 955
PdiI GCCGGC 2 cut(s) 118, 427
PfeI GAWTC 5 cut(s) 19, 402, 554, 652, 658
PflMI CCANNNNNTGG 1 cut(s) 670
PkrI GCNGC 1 cut(s) 392
PleI GAGTC 2 cut(s) 1036, 1365
PpsI GAGTC 2 cut(s) 1036, 1365
Ppu21I YACGTR 1 cut(s) 1085
Psp6I CCWGG 1 cut(s) 877
PspFI CCCAGC 1 cut(s) 1124
PspGI CCWGG 1 cut(s) 877
PspN4I GGNNCC 2 cut(s) 729, 1260
PspPI GGNCC 4 cut(s) 529, 727, 872, 1047
PstNI CAGNNNCTG 1 cut(s) 971
PsuI RGATCY 2 cut(s) 310, 1258
PvuII CAGCTG 1 cut(s) 366
RsaI GTAC 1 cut(s) 712
RsaNI GTAC 1 cut(s) 711
SaqAI TTAA 6 cut(s) 186, 420, 867, 1023, 1161, 1289
SatI GCNGC 1 cut(s) 391
Sau3AI GATC 5 cut(s) 93, 310, 448, 811, 1258
Sau96I GGNCC 4 cut(s) 529, 727, 872, 1047
SchI GAGTC 2 cut(s) 1037, 1365
ScrFI CCNGG 3 cut(s) 731, 879, 1269
SfaNI GCATC 8 cut(s) 96, 151, 345, 692, 724, 919, 1296, 1353
SinI GGWCC 4 cut(s) 529, 727, 872, 1047
SpeI ACTAGT 1 cut(s) 1348
SphI GCATGC 1 cut(s) 44
SsiI CCGC 2 cut(s) 14, 901
SspMI CTAG 6 cut(s) 156, 465, 704, 744, 1194, 1349
StyD4I CCNGG 3 cut(s) 729, 877, 1267
StyI CCWWGG 1 cut(s) 630
TaaI ACNGT 2 cut(s) 919, 1322
TaiI ACGT 2 cut(s) 193, 1087
TaqI TCGA 1 cut(s) 22
TfiI GAWTC 5 cut(s) 19, 402, 554, 652, 658
Tru1I TTAA 6 cut(s) 186, 420, 867, 1023, 1161, 1289
Tru9I TTAA 6 cut(s) 186, 420, 867, 1023, 1161, 1289
TseI GCWGC 1 cut(s) 390
TspGWI ACGGA 1 cut(s) 631
Van91I CCANNNNNTGG 1 cut(s) 670
VpaK11BI GGWCC 4 cut(s) 529, 727, 872, 1047
XagI CCTNNNNNAGG 2 cut(s) 629, 867
XapI RAATTY 4 cut(s) 359, 520, 996, 1249
XceI RCATGY 2 cut(s) 44, 964
XcmI CCANNNNNNNNNTGG 1 cut(s) 721
XmiI GTMKAC 1 cut(s) 700
XspI CTAG 6 cut(s) 156, 465, 704, 744, 1194, 1349
Zsp2I ATGCAT 2 cut(s) 739, 1311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.