Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0000991

Physical Location & Seq

Genomic Coordinates Forward (+)

66830740 .. 66837956

Gene Structure 7217 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG448900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGGAGAACACAAGCAGCTTGCTACTGAACTTTGAGGCAGAGATGGAAGATCAGCAACCAAGTCTAAGCCCGGCAGCGCGTCTGTTTCACTCACCAAAGTTCAGCTGCTATATTGTCATAAGAATGGGGTGCAGCATCAAGATCAATCCTGAAGTAATCAGCGCCGGCTTGAAGGAAACCTTGTATAAGCATCCTCGCTTCTCTAGCAAAATGGTGAAGGATAGAAACTTATGTCGTAAAAAGAGATGGATACAAGTTCCAATAAATGTGGAGGACCATGTTATTGTTCCAAACATGGATTCAGATATGGAGGATGCTGACCAATTTGTCAGAGACTACATTTCCCACCTTACCAAAAGCCCTCTTGACCTTTCCAAGCCACTATGGGAAGTCCATATCCTCAATGTCAAAACCTCTGATGCAGAAGCTGTTTTAGTGATTCGGATTCACCACTCGATTGGGGATGGCGCGTCCCTCATGTCACTTCTACTAGCTTGTACCAGAAAAACATCGGACCCGGATGCATTGCCTAGTGTTCCAACCAAGAGGAAACATGAGGGTAGTTCTTCAAGTGAATCGAGCGTGTTCTGGTGGTTGTTATTGGCTATTTGGTCAGCAGTAACATTGATAGGGAACACTCTTGTTGATATTGTGCTGTTTGTAGCCACTATTCTGGTTTTGAAAGACACAAAGACTCCTATTAAAGGTCCACCTGGGGTTGAGCTTACTGCCAAGCGCTTCTTGCATCGAACAGTTAGTTTTGATCACATCAAACAAGTGAAGAATGCTTTGAACATGACCATCAATGATGTTGTATTAGGAGTGACACAGGCGGGTCTATCGCGATATTTGAACTGCAGATATGCAGGTGAAAATGAGAAAGATGAGGGAGCAAGGAAGAAGGGACATAATCTACCAAAAAGTATCCGCCTTCGAGCAAATATTCTCGTTAATTTACGACCAGCTGTTGGGATCCAGGAACTGGCCGATATGATGGCTAAGAAGTCCAAGACCAAGTGGGGTAATAGGATTGGATATGTCCTGGTACCCTTCACCATTGCTCTACAAGATGACCCTTTGGATTATGTTTGTGGAGCCAAGTTGCTTATGGATCGGAAAAAGCACTCATTTGAAGCATTTTGCACATACTTAAGTGCCAATCTTTTAACCAAACTAATCGGAGCAAAGGGAGCTGGAGCAGTAGCACACAGAGTTCTTTGTAATTCCACATTAGCATTCACAAACTTGATTGGTCCCCTCGAAGAAATTAGCTATTACGGGCATCCAATTACTTACATTGCTCCTAATGTTTACGGCCATCCACATGGGGAGCTCTATCAGTCTATCAAGCCTGATGATTGCTTATGGAGCATAGAGGATCAAACTGCTGTCTCTATTCTCCTGACCAAACACAACCAACTGGAGTGGTGGAAGGCTCTGCTGAAAGGTGACCCTGAAATAGACACTCAGAAAGTTGAACCGGAGCCAAGCAAATTGTCTGACCTGGATTCAGAAACACGTCAGACCGTCGAAAAAATGATGTTTGATCAGCGGCAAAAGCAGATGGGCCTTCCAACCAGTGAGGAGATGCAGAAGCAGGAGATCTTGAAGAAATTTATGTCTGAGCATCCGGAAATGGACTTCTCAAGGGCCAAGATACAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004144 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0008150 GO:0008152 GO:0008374 GO:0008610 GO:0009058 GO:0009987 GO:0010025 GO:0010166 GO:0012505 GO:0016020 GO:0016411 GO:0016740 GO:0016746 GO:0016747 GO:0019432 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0045017 GO:0046460 GO:0046463 GO:0046486 GO:0047196 GO:0071704 GO:0071944 GO:1901568 GO:1901570 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00073 map00073

Pfam Domains

Protein Families

DUF1298 WES_acyltransf

Protein Analysis

554

Amino Acids

62.41

Weight (kDa)

8.38

Isoelectric Point (pI)

39.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WS_DGAT_cat	PF03007	58 - 272	7.9e-17	Wax ester synthase/diacylglycerol acyltransferase catalytic domain
WS_DGAT_C	PF06974	340 - 443	2e-30	WS/DGAT C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000991)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49190 AT3G49200 AT3G49210 AT3G49210 AT5G53390
fragaria_vesca	FvH4_5g22430 FvH4_7g31660 FvH4_7g31660 FvH4_7g31660 FvH4_7g31660 FvH4_7g31660
malus_domestica	MD07G1289400.v1.1
prunus_persica	Prupe.2G310700_v2.0.a1 Prupe.2G310700_v2.0.a1 Prupe.2G310700_v2.0.a1 Prupe.2G310700_v2.0.a1 Prupe.2G310700_v2.0.a1 Prupe.2G310700_v2.0.a1 Prupe.2G310700_v2.0.a1 Prupe.2G310700_v2.0.a1 Prupe.2G310700_v2.0.a1 Prupe.2G310700_v2.0.a1
pyrus_communis	pycom07g26220
rosa_chinensis	RchiOBHm_Chr1g0380751 RchiOBHm_Chr1g0380761 RchiOBHm_Chr1g0380771 RchiOBHm_Chr1g0380861 RchiOBHm_Chr7g0210181 RchiOBHm_Chr7g0210211
rosa_laevigata	RLG00000003058 RLG00000026267 RLG00000026272
rosa_multiflora	Rmu_sc0001637.1_g000015 Rmu_sc0002892.1_g000011 Rmu_sc0002962.1_g000013 Rmu_sc0002962.1_g000014 Rmu_sc0002962.1_g000015 Rmu_sc0005438.1_g000009 Rmu_sc0006908.1_g000008
rosa_roxburghii	Rroxscaffold_3G00248550 Rroxscaffold_3G00248560 Rroxscaffold_4G00279010
rosa_rugosa	Rorug01G0424000 Rorug01G0424400 Rorug01G0424500 Rorug07G0119100
rosa_samantha	Rh1AG448900 Rh1BG403800 Rh1BG403900 Rh1BG404400 Rh1CG418100 Rh1CG418500 Rh1DG434000 Rh1DG434100 Rh1DG434800 Rh7AG252600 Rh7BG247700 Rh7CG269600 Rh7DG260200
rosa_wichuraiana	Rw0G005940 Rw1G039120 Rw7G021480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	857
AasI	GACNNNNNNGTC	1 cut(s)	326
Acc36I	ACCTGC	1 cut(s)	857
Acc65I	GGTACC	1 cut(s)	1045
AccB1I	GGYRCC	1 cut(s)	1045
AccB7I	CCANNNNNTGG	2 cut(s)	968, 982
AccII	CGCG	3 cut(s)	79, 470, 844
AccIII	TCCGGA	1 cut(s)	1630
AciI	CCGC	3 cut(s)	833, 928, 1552
AclWI	GGATC	4 cut(s)	967, 980, 1119, 1386
AcoI	YGGCCR	2 cut(s)	984, 1315
AcsI	RAATTY	1 cut(s)	1613
AcuI	CTGAAG	1 cut(s)	171
AfaI	GTAC	2 cut(s)	499, 1047
AfeI	AGCGCT	1 cut(s)	737
AfiI	CCNNNNNNNGG	3 cut(s)	704, 968, 982
AflII	CTTAAG	1 cut(s)	1150
AflIII	ACRYGT	1 cut(s)	1517
AgsI	TTSAA	8 cut(s)	172, 570, 682, 793, 853, 1133, 1478, 1609
AjiI	CACGTC	1 cut(s)	1520
AjnI	CCWGG	4 cut(s)	712, 975, 1041, 1503
AjuI	GAANNNNNNNTTGG	2 cut(s)	283, 315
AluBI	AGCT	9 cut(s)	18, 105, 428, 494, 724, 965, 1193, 1272, 1333
AluI	AGCT	9 cut(s)	18, 105, 428, 494, 724, 965, 1193, 1272, 1333
Alw21I	GWGCWC	1 cut(s)	1335
Alw26I	GTCTC	2 cut(s)	327, 1396
AlwI	GGATC	4 cut(s)	967, 980, 1119, 1386
AlwNI	CAGNNNCTG	2 cut(s)	428, 982
Aor13HI	TCCGGA	1 cut(s)	1630
Aor51HI	AGCGCT	1 cut(s)	737
AoxI	GGCC	4 cut(s)	984, 1315, 1567, 1650
ApeKI	GCWGC	4 cut(s)	15, 74, 105, 132
ApoI	RAATTY	1 cut(s)	1613
Asp718I	GGTACC	1 cut(s)	1045
AspLEI	GCGC	4 cut(s)	79, 164, 470, 738
AspS9I	GGNCC	6 cut(s)	274, 514, 707, 1253, 1567, 1650
AsuC2I	CCSGG	2 cut(s)	71, 518
AsuHPI	GGTGA	6 cut(s)	84, 226, 440, 881, 1045, 1460
AvaII	GGWCC	4 cut(s)	274, 514, 707, 1253
BamHI	GGATCC	1 cut(s)	972
BanI	GGYRCC	1 cut(s)	1045
BanII	GRGCYC	1 cut(s)	1335
Bbv12I	GWGCWC	1 cut(s)	1335
BbvI	GCAGC	4 cut(s)	27, 86, 92, 144
BccI	CCATC	7 cut(s)	37, 240, 458, 809, 988, 1326, 1558
BceAI	ACGGC	1 cut(s)	1330
BciT130I	CCWGG	4 cut(s)	714, 977, 1043, 1505
BciVI	GTATCC	2 cut(s)	243, 935
BclI	TGATCA	2 cut(s)	763, 1546
BcnI	CCSGG	2 cut(s)	71, 518
BcoDI	GTCTC	2 cut(s)	327, 1396
BfaI	CTAG	3 cut(s)	204, 491, 531
BfmI	CTRYAG	1 cut(s)	856
BfoI	RGCGCY	2 cut(s)	165, 739
BfrI	CTTAAG	1 cut(s)	1150
BfuAI	ACCTGC	1 cut(s)	857
BfuI	GTATCC	2 cut(s)	243, 935
BglII	AGATCT	1 cut(s)	1602
BisI	GCNGC	5 cut(s)	16, 75, 106, 133, 1553
BlsI	GCNGC	5 cut(s)	17, 76, 107, 134, 1554
Bme1390I	CCNGG	6 cut(s)	71, 518, 714, 977, 1043, 1505
Bme18I	GGWCC	4 cut(s)	274, 514, 707, 1253
BmgBI	CACGTC	1 cut(s)	1520
BmgT120I	GGNCC	6 cut(s)	274, 514, 707, 1253, 1567, 1650
BmiI	GGNNCC	6 cut(s)	516, 974, 1047, 1096, 1255, 1485
BmrFI	CCNGG	6 cut(s)	71, 518, 714, 977, 1043, 1505
BmsI	GCATC	9 cut(s)	144, 199, 304, 409, 511, 754, 1291, 1578, 1636
BpmI	CTGGAG	2 cut(s)	1215, 1442
BpuEI	CTTGAG	1 cut(s)	1630
BpuMI	CCSGG	2 cut(s)	71, 518
BsaJI	CCNNGG	1 cut(s)	713
BsaWI	WCCGGW	2 cut(s)	1480, 1630
BsaXI	ACNNNNNCTCC	2 cut(s)	679, 709
Bsc4I	CCNNNNNNNGG	3 cut(s)	704, 968, 982
Bse118I	RCCGGY	1 cut(s)	164
Bse1I	ACTGG	3 cut(s)	987, 1425, 1578
Bse3DI	GCAATG	3 cut(s)	524, 1056, 1296
BseAI	TCCGGA	1 cut(s)	1630
BseBI	CCWGG	4 cut(s)	714, 977, 1043, 1505
BseDI	CCNNGG	1 cut(s)	713
BseGI	GGATG	7 cut(s)	190, 319, 469, 526, 1282, 1318, 1627
BseLI	CCNNNNNNNGG	3 cut(s)	704, 968, 982
BseMI	GCAATG	3 cut(s)	524, 1056, 1296
BseMII	CTCAG	2 cut(s)	1481, 1614
BseNI	ACTGG	3 cut(s)	987, 1425, 1578
BseRI	GAGGAG	1 cut(s)	1598
BseXI	GCAGC	4 cut(s)	27, 86, 92, 144
BsgI	GTGCAG	1 cut(s)	151
Bsh1236I	CGCG	3 cut(s)	79, 470, 844
BshFI	GGCC	4 cut(s)	986, 1317, 1569, 1652
BshNI	GGYRCC	1 cut(s)	1045
BsiHKAI	GWGCWC	1 cut(s)	1335
BsiSI	CCGG	5 cut(s)	71, 165, 518, 1481, 1631
BslFI	GGGAC	3 cut(s)	457, 918, 1239
BslI	CCNNNNNNNGG	3 cut(s)	704, 968, 982
BsmAI	GTCTC	2 cut(s)	327, 1396
BsmFI	GGGAC	3 cut(s)	457, 918, 1239
BsmI	GAATGC	2 cut(s)	790, 1235
BsnI	GGCC	4 cut(s)	986, 1317, 1569, 1652
Bsp1286I	GDGCHC	1 cut(s)	1335
Bsp13I	TCCGGA	1 cut(s)	1630
Bsp143I	GATC	8 cut(s)	49, 141, 763, 972, 1111, 1378, 1546, 1602
Bsp68I	TCGCGA	1 cut(s)	844
BspACI	CCGC	3 cut(s)	833, 928, 1552
BspANI	GGCC	4 cut(s)	986, 1317, 1569, 1652
BspCNI	CTCAG	2 cut(s)	1480, 1615
BspEI	TCCGGA	1 cut(s)	1630
BspFNI	CGCG	3 cut(s)	79, 470, 844
BspLI	GGNNCC	6 cut(s)	516, 974, 1047, 1096, 1255, 1485
BspMAI	CTGCAG	1 cut(s)	860
BspMI	ACCTGC	1 cut(s)	857
BspPI	GGATC	4 cut(s)	967, 980, 1119, 1386
BspT107I	GGYRCC	1 cut(s)	1045
BspTI	CTTAAG	1 cut(s)	1150
BsrDI	GCAATG	3 cut(s)	524, 1056, 1296
BsrFI	RCCGGY	1 cut(s)	164
BsrI	ACTGG	3 cut(s)	987, 1425, 1578
BssAI	RCCGGY	1 cut(s)	164
BssECI	CCNNGG	1 cut(s)	713
BssMI	GATC	8 cut(s)	49, 141, 763, 972, 1111, 1378, 1546, 1602
Bst2UI	CCWGG	4 cut(s)	714, 977, 1043, 1505
Bst4CI	ACNGT	3 cut(s)	754, 1528, 1662
BstAFI	CTTAAG	1 cut(s)	1150
BstC8I	GCNNGC	2 cut(s)	20, 166
BstDEI	CTNAG	4 cut(s)	65, 999, 1467, 1623
BstEII	GGTNACC	1 cut(s)	1448
BstENI	CCTNNNNNAGG	1 cut(s)	702
BstF5I	GGATG	7 cut(s)	190, 319, 469, 526, 1282, 1318, 1627
BstFNI	CGCG	3 cut(s)	79, 470, 844
BstH2I	RGCGCY	2 cut(s)	165, 739
BstHHI	GCGC	4 cut(s)	79, 164, 470, 738
BstKTI	GATC	8 cut(s)	52, 144, 766, 975, 1114, 1381, 1549, 1605
BstMAI	GTCTC	2 cut(s)	327, 1396
BstMBI	GATC	8 cut(s)	49, 141, 763, 972, 1111, 1378, 1546, 1602
BstMWI	GCNNNNNNNGC	5 cut(s)	204, 742, 1190, 1368, 1558
BstNI	CCWGG	4 cut(s)	714, 977, 1043, 1505
BstPI	GGTNACC	1 cut(s)	1448
BstSCI	CCNGG	6 cut(s)	69, 516, 712, 975, 1041, 1503
BstSFI	CTRYAG	1 cut(s)	856
BstUI	CGCG	3 cut(s)	79, 470, 844
BstV1I	GCAGC	4 cut(s)	27, 86, 92, 144
BstX2I	RGATCY	2 cut(s)	972, 1602
BstXI	CCANNNNNNTGG	3 cut(s)	458, 673, 1325
BstYI	RGATCY	2 cut(s)	972, 1602
BsuI	GTATCC	2 cut(s)	243, 935
BsuRI	GGCC	4 cut(s)	986, 1317, 1569, 1652
BtrI	CACGTC	1 cut(s)	1520
BtsCI	GGATG	7 cut(s)	190, 319, 469, 526, 1282, 1318, 1627
BtsIMutI	CAGTG	1 cut(s)	1585
BtuMI	TCGCGA	1 cut(s)	844
BveI	ACCTGC	1 cut(s)	857
Cac8I	GCNNGC	2 cut(s)	20, 166
CaiI	CAGNNNCTG	2 cut(s)	428, 982
CfoI	GCGC	4 cut(s)	79, 164, 470, 738
Cfr10I	RCCGGY	1 cut(s)	164
Cfr13I	GGNCC	6 cut(s)	274, 514, 707, 1253, 1567, 1650
CseI	GACGC	2 cut(s)	68, 459
Csp6I	GTAC	2 cut(s)	498, 1046
CspCI	CAANNNNNGTGG	4 cut(s)	249, 284, 1406, 1441
CviAII	CATG	6 cut(s)	278, 295, 478, 554, 796, 1325
CviQI	GTAC	2 cut(s)	498, 1046
DdeI	CTNAG	4 cut(s)	65, 999, 1467, 1623
DpnI	GATC	8 cut(s)	51, 143, 765, 974, 1113, 1380, 1548, 1604
DpnII	GATC	8 cut(s)	49, 141, 763, 972, 1111, 1378, 1546, 1602
DrdI	GACNNNNNNGTC	1 cut(s)	326
DseDI	GACNNNNNNGTC	1 cut(s)	326
EaeI	YGGCCR	2 cut(s)	984, 1315
EciI	GGCGGA	1 cut(s)	917
Ecl136II	GAGCTC	1 cut(s)	1333
Eco24I	GRGCYC	1 cut(s)	1335
Eco47I	GGWCC	4 cut(s)	274, 514, 707, 1253
Eco47III	AGCGCT	1 cut(s)	737
Eco53kI	GAGCTC	1 cut(s)	1333
Eco57I	CTGAAG	1 cut(s)	171
Eco91I	GGTNACC	1 cut(s)	1448
EcoICRI	GAGCTC	1 cut(s)	1333
EcoNI	CCTNNNNNAGG	1 cut(s)	702
EcoO65I	GGTNACC	1 cut(s)	1448
EcoRII	CCWGG	4 cut(s)	712, 975, 1041, 1503
EcoT22I	ATGCAT	1 cut(s)	526
EcoT38I	GRGCYC	1 cut(s)	1335
FaeI	CATG	6 cut(s)	281, 298, 481, 557, 799, 1328
FalI	AAGNNNNNCTT	4 cut(s)	164, 196, 725, 757
FaqI	GGGAC	3 cut(s)	457, 918, 1239
FatI	CATG	6 cut(s)	277, 294, 477, 553, 795, 1324
FauI	CCCGC	1 cut(s)	826
FbaI	TGATCA	2 cut(s)	763, 1546
Fnu4HI	GCNGC	5 cut(s)	16, 75, 106, 133, 1553
FokI	GGATG	7 cut(s)	177, 326, 476, 533, 1269, 1305, 1614
FriOI	GRGCYC	1 cut(s)	1335
Fsp4HI	GCNGC	5 cut(s)	16, 75, 106, 133, 1553
FspBI	CTAG	3 cut(s)	204, 491, 531
GlaI	GCGC	4 cut(s)	78, 163, 469, 737
GluI	GCNGC	5 cut(s)	16, 75, 106, 133, 1553
GsuI	CTGGAG	2 cut(s)	1215, 1442
HaeII	RGCGCY	2 cut(s)	165, 739
HaeIII	GGCC	4 cut(s)	986, 1317, 1569, 1652
HapII	CCGG	5 cut(s)	71, 165, 518, 1481, 1631
HgaI	GACGC	2 cut(s)	68, 459
HhaI	GCGC	4 cut(s)	79, 164, 470, 738
Hin1II	CATG	6 cut(s)	281, 298, 481, 557, 799, 1328
Hin6I	GCGC	4 cut(s)	77, 162, 468, 736
HinP1I	GCGC	4 cut(s)	77, 162, 468, 736
HinfI	GANTC	6 cut(s)	299, 439, 445, 575, 694, 1508
HpaII	CCGG	5 cut(s)	71, 165, 518, 1481, 1631
HphI	GGTGA	6 cut(s)	84, 226, 440, 881, 1045, 1460
Hpy166II	GTNNAC	2 cut(s)	710, 1312
Hpy188III	TCNNGA	7 cut(s)	139, 149, 365, 843, 1402, 1606, 1631
Hpy8I	GTNNAC	2 cut(s)	710, 1312
Hpy99I	CGWCG	1 cut(s)	1532
HpyAV	CCTTC	7 cut(s)	166, 211, 895, 941, 1060, 1426, 1580
HpyCH4III	ACNGT	3 cut(s)	754, 1528, 1662
HpyCH4IV	ACGT	1 cut(s)	1519
HpyCH4V	TGCA	8 cut(s)	132, 422, 524, 745, 858, 866, 1143, 1591
HpyF10VI	GCNNNNNNNGC	5 cut(s)	204, 742, 1190, 1368, 1558
HpyF3I	CTNAG	4 cut(s)	65, 999, 1467, 1623
HpySE526I	ACGT	1 cut(s)	1519
Hsp92II	CATG	6 cut(s)	281, 298, 481, 557, 799, 1328
HspAI	GCGC	4 cut(s)	77, 162, 468, 736
Kpn2I	TCCGGA	1 cut(s)	1630
KpnI	GGTACC	1 cut(s)	1049
KroI	GCCGGC	1 cut(s)	164
KroNI	GCCGGC	1 cut(s)	166
Ksp22I	TGATCA	2 cut(s)	763, 1546
Kzo9I	GATC	8 cut(s)	49, 141, 763, 972, 1111, 1378, 1546, 1602
LmnI	GCTCC	9 cut(s)	890, 1094, 1181, 1190, 1196, 1306, 1330, 1368, 1483
Lsp1109I	GCAGC	4 cut(s)	27, 86, 92, 144
LweI	GCATC	9 cut(s)	144, 199, 304, 409, 511, 754, 1291, 1578, 1636
MaeI	CTAG	3 cut(s)	204, 491, 531
MaeII	ACGT	1 cut(s)	1519
MaeIII	GTNAC	4 cut(s)	480, 619, 823, 1448
MalI	GATC	8 cut(s)	51, 143, 765, 974, 1113, 1380, 1548, 1604
MboI	GATC	8 cut(s)	49, 141, 763, 972, 1111, 1378, 1546, 1602
MboII	GAAGA	6 cut(s)	59, 558, 793, 910, 1274, 1621
MflI	RGATCY	2 cut(s)	972, 1602
MhlI	GDGCHC	1 cut(s)	1335
MluCI	AATT	7 cut(s)	323, 952, 1222, 1266, 1287, 1493, 1613
MlyI	GAGTC	1 cut(s)	688
MmeI	TCCRAC	2 cut(s)	563, 1598
Mph1103I	ATGCAT	1 cut(s)	526
MroI	TCCGGA	1 cut(s)	1630
MroNI	GCCGGC	1 cut(s)	164
MseI	TTAA	4 cut(s)	702, 951, 1151, 1166
MslI	CAYNNNNRTG	2 cut(s)	122, 1323
MspA1I	CMGCKG	3 cut(s)	105, 965, 1552
MspCI	CTTAAG	1 cut(s)	1150
MspI	CCGG	5 cut(s)	71, 165, 518, 1481, 1631
MspR9I	CCNGG	6 cut(s)	71, 518, 714, 977, 1043, 1505
Mva1269I	GAATGC	2 cut(s)	790, 1235
MvaI	CCWGG	4 cut(s)	714, 977, 1043, 1505
MvnI	CGCG	3 cut(s)	79, 470, 844
MwoI	GCNNNNNNNGC	5 cut(s)	204, 742, 1190, 1368, 1558
NaeI	GCCGGC	1 cut(s)	166
NciI	CCSGG	2 cut(s)	71, 518
NdeII	GATC	8 cut(s)	49, 141, 763, 972, 1111, 1378, 1546, 1602
NgoMIV	GCCGGC	1 cut(s)	164
NlaIII	CATG	6 cut(s)	281, 298, 481, 557, 799, 1328
NlaIV	GGNNCC	6 cut(s)	516, 974, 1047, 1096, 1255, 1485
NmuCI	GTSAC	3 cut(s)	480, 823, 1448
NruI	TCGCGA	1 cut(s)	844
NsiI	ATGCAT	1 cut(s)	526
PaqCI	CACCTGC	1 cut(s)	857
PctI	GAATGC	2 cut(s)	790, 1235
PdiI	GCCGGC	1 cut(s)	166
PfeI	GAWTC	5 cut(s)	299, 439, 445, 575, 1508
PflMI	CCANNNNNTGG	2 cut(s)	968, 982
PfoI	TCCNGGA	1 cut(s)	975
PkrI	GCNGC	5 cut(s)	17, 76, 107, 134, 1554
PleI	GAGTC	1 cut(s)	688
PpsI	GAGTC	1 cut(s)	688
Psp124BI	GAGCTC	1 cut(s)	1335
Psp6I	CCWGG	4 cut(s)	712, 975, 1041, 1503
PspEI	GGTNACC	1 cut(s)	1448
PspGI	CCWGG	4 cut(s)	712, 975, 1041, 1503
PspN4I	GGNNCC	6 cut(s)	516, 974, 1047, 1096, 1255, 1485
PspPI	GGNCC	6 cut(s)	274, 514, 707, 1253, 1567, 1650
PstI	CTGCAG	1 cut(s)	860
PstNI	CAGNNNCTG	2 cut(s)	428, 982
PsuI	RGATCY	2 cut(s)	972, 1602
PvuII	CAGCTG	2 cut(s)	105, 965
RruI	TCGCGA	1 cut(s)	844
RsaI	GTAC	2 cut(s)	499, 1047
RsaNI	GTAC	2 cut(s)	498, 1046
RseI	CAYNNNNRTG	2 cut(s)	122, 1323
SacI	GAGCTC	1 cut(s)	1335
SaqAI	TTAA	4 cut(s)	702, 951, 1151, 1166
SatI	GCNGC	5 cut(s)	16, 75, 106, 133, 1553
Sau3AI	GATC	8 cut(s)	49, 141, 763, 972, 1111, 1378, 1546, 1602
Sau96I	GGNCC	6 cut(s)	274, 514, 707, 1253, 1567, 1650
SchI	GAGTC	1 cut(s)	688
ScrFI	CCNGG	6 cut(s)	71, 518, 714, 977, 1043, 1505
SduI	GDGCHC	1 cut(s)	1335
SfaNI	GCATC	9 cut(s)	144, 199, 304, 409, 511, 754, 1291, 1578, 1636
SfcI	CTRYAG	1 cut(s)	856
SinI	GGWCC	4 cut(s)	274, 514, 707, 1253
SmiMI	CAYNNNNRTG	2 cut(s)	122, 1323
SmlI	CTYRAG	2 cut(s)	1150, 1645
SmoI	CTYRAG	2 cut(s)	1150, 1645
Sse9I	AATT	7 cut(s)	323, 952, 1222, 1266, 1287, 1493, 1613
SsiI	CCGC	3 cut(s)	833, 928, 1552
SspI	AATATT	1 cut(s)	943
SspMI	CTAG	3 cut(s)	204, 491, 531
SstI	GAGCTC	1 cut(s)	1335
StyD4I	CCNGG	6 cut(s)	69, 516, 712, 975, 1041, 1503
TaaI	ACNGT	3 cut(s)	754, 1528, 1662
TaiI	ACGT	1 cut(s)	1522
TaqI	TCGA	6 cut(s)	455, 578, 748, 934, 1260, 1530
TasI	AATT	7 cut(s)	323, 952, 1222, 1266, 1287, 1493, 1613
TauI	GCSGC	1 cut(s)	1555
TfiI	GAWTC	5 cut(s)	299, 439, 445, 575, 1508
Tru1I	TTAA	4 cut(s)	702, 951, 1151, 1166
Tru9I	TTAA	4 cut(s)	702, 951, 1151, 1166
TscAI	CASTG	1 cut(s)	1585
TseFI	GTSAC	3 cut(s)	480, 823, 1448
TseI	GCWGC	4 cut(s)	15, 74, 105, 132
Tsp45I	GTSAC	3 cut(s)	480, 823, 1448
TspRI	CASTG	1 cut(s)	1585
Van91I	CCANNNNNTGG	2 cut(s)	968, 982
Vha464I	CTTAAG	1 cut(s)	1150
VpaK11BI	GGWCC	4 cut(s)	274, 514, 707, 1253
XagI	CCTNNNNNAGG	1 cut(s)	702
XapI	RAATTY	1 cut(s)	1613
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1105
XspI	CTAG	3 cut(s)	204, 491, 531
Zsp2I	ATGCAT	1 cut(s)	526

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.