Rh1BG403900

O-acyltransferase (WSD1-like)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Forward (+)
52696461 .. 52696754
294 bp
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UTR
Exon/CDS
Intron
Rh1BG403900.1

Sequence Viewer

Length: 294 bp
ATGGCGGCTGGCGCATCCCTCATGTCACATCTACTAGCTTGTACCACAAAAACATTGGACCCGGATGCATTGCCTAGTGTTCCAACCAAGAGGAAACATGAGGGTAGTTCTTCAAGTGATTCGAGCGTATTCTGGTGGTTGTTGATGGCTATTTGGTTAGCAGTAACATTGATAGGGAACACTCTTGTTGATCTTGTGCTATTTGTTGCCACAATTCTGGTTTTGAAAGACACCAAGACTCCTATTAAAGGTCCACCTGGGGTTGAGCTTACTGCCAAGCGGTTCTTGCATTGA

Protein Analysis

97

Amino Acids

10.44

Weight (kDa)

8.93

Isoelectric Point (pI)

43.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 5, 280
AfaI GTAC 1 cut(s) 43
AfiI CCNNNNNNNGG 1 cut(s) 248
AgsI TTSAA 2 cut(s) 114, 226
AjnI CCWGG 1 cut(s) 256
AluBI AGCT 2 cut(s) 38, 268
AluI AGCT 2 cut(s) 38, 268
AspLEI GCGC 1 cut(s) 14
AspS9I GGNCC 2 cut(s) 58, 251
AsuC2I CCSGG 1 cut(s) 62
AvaII GGWCC 2 cut(s) 58, 251
BccI CCATC 1 cut(s) 139
BciT130I CCWGG 1 cut(s) 258
BcnI CCSGG 1 cut(s) 62
BfaI CTAG 2 cut(s) 35, 75
BisI GCNGC 1 cut(s) 6
BlsI GCNGC 1 cut(s) 7
Bme1390I CCNGG 2 cut(s) 62, 258
Bme18I GGWCC 2 cut(s) 58, 251
BmgT120I GGNCC 2 cut(s) 58, 251
BmiI GGNNCC 1 cut(s) 60
BmrFI CCNGG 2 cut(s) 62, 258
BmsI GCATC 2 cut(s) 23, 55
BpuMI CCSGG 1 cut(s) 62
BsaJI CCNNGG 1 cut(s) 257
BsaXI ACNNNNNCTCC 2 cut(s) 223, 253
Bsc4I CCNNNNNNNGG 1 cut(s) 248
Bse3DI GCAATG 1 cut(s) 68
BseBI CCWGG 1 cut(s) 258
BseDI CCNNGG 1 cut(s) 257
BseGI GGATG 2 cut(s) 14, 70
BseLI CCNNNNNNNGG 1 cut(s) 248
BseMI GCAATG 1 cut(s) 68
BsiSI CCGG 1 cut(s) 62
BslI CCNNNNNNNGG 1 cut(s) 248
Bsp143I GATC 1 cut(s) 190
BspACI CCGC 2 cut(s) 5, 280
BspLI GGNNCC 1 cut(s) 60
BsrDI GCAATG 1 cut(s) 68
BssECI CCNNGG 1 cut(s) 257
BssMI GATC 1 cut(s) 190
Bst2UI CCWGG 1 cut(s) 258
BstC8I GCNNGC 1 cut(s) 10
BstENI CCTNNNNNAGG 1 cut(s) 246
BstF5I GGATG 2 cut(s) 14, 70
BstHHI GCGC 1 cut(s) 14
BstKTI GATC 1 cut(s) 193
BstMBI GATC 1 cut(s) 190
BstMWI GCNNNNNNNGC 2 cut(s) 11, 286
BstNI CCWGG 1 cut(s) 258
BstSCI CCNGG 2 cut(s) 60, 256
BstXI CCANNNNNNTGG 1 cut(s) 217
BtsCI GGATG 2 cut(s) 14, 70
Cac8I GCNNGC 1 cut(s) 10
CfoI GCGC 1 cut(s) 14
Cfr13I GGNCC 2 cut(s) 58, 251
Csp6I GTAC 1 cut(s) 42
CviAII CATG 2 cut(s) 22, 98
CviJI RGCY 4 cut(s) 8, 38, 149, 268
CviKI_1 RGCY 4 cut(s) 8, 38, 149, 268
CviQI GTAC 1 cut(s) 42
DpnI GATC 1 cut(s) 192
DpnII GATC 1 cut(s) 190
Eco47I GGWCC 2 cut(s) 58, 251
EcoNI CCTNNNNNAGG 1 cut(s) 246
EcoRII CCWGG 1 cut(s) 256
EcoT22I ATGCAT 1 cut(s) 70
FaeI CATG 2 cut(s) 25, 101
FaiI YATR 2 cut(s) 23, 99
FalI AAGNNNNNCTT 1 cut(s) 269
FatI CATG 2 cut(s) 21, 97
Fnu4HI GCNGC 1 cut(s) 6
FokI GGATG 1 cut(s) 77
Fsp4HI GCNGC 1 cut(s) 6
FspBI CTAG 2 cut(s) 35, 75
GlaI GCGC 1 cut(s) 13
GluI GCNGC 1 cut(s) 6
HapII CCGG 1 cut(s) 62
HhaI GCGC 1 cut(s) 14
Hin1II CATG 2 cut(s) 25, 101
Hin6I GCGC 1 cut(s) 12
HinP1I GCGC 1 cut(s) 12
HinfI GANTC 2 cut(s) 119, 238
HpaII CCGG 1 cut(s) 62
Hpy166II GTNNAC 1 cut(s) 254
Hpy8I GTNNAC 1 cut(s) 254
HpyCH4V TGCA 2 cut(s) 68, 289
HpyF10VI GCNNNNNNNGC 2 cut(s) 11, 286
Hsp92II CATG 2 cut(s) 25, 101
HspAI GCGC 1 cut(s) 12
Kzo9I GATC 1 cut(s) 190
LpnPI CCDG 5 cut(s) 75, 118, 203, 243, 270
LweI GCATC 2 cut(s) 23, 55
MaeI CTAG 2 cut(s) 35, 75
MaeIII GTNAC 2 cut(s) 24, 163
MalI GATC 1 cut(s) 192
MboI GATC 1 cut(s) 190
MboII GAAGA 1 cut(s) 102
MluCI AATT 1 cut(s) 213
MlyI GAGTC 1 cut(s) 232
MmeI TCCRAC 1 cut(s) 107
MnlI CCTC 3 cut(s) 29, 84, 94
Mph1103I ATGCAT 1 cut(s) 70
MseI TTAA 1 cut(s) 246
MspI CCGG 1 cut(s) 62
MspR9I CCNGG 2 cut(s) 62, 258
MvaI CCWGG 1 cut(s) 258
MwoI GCNNNNNNNGC 2 cut(s) 11, 286
NciI CCSGG 1 cut(s) 62
NdeII GATC 1 cut(s) 190
NlaIII CATG 2 cut(s) 25, 101
NlaIV GGNNCC 1 cut(s) 60
NmuCI GTSAC 1 cut(s) 24
NsiI ATGCAT 1 cut(s) 70
PfeI GAWTC 1 cut(s) 119
PkrI GCNGC 1 cut(s) 7
PleI GAGTC 1 cut(s) 232
PpsI GAGTC 1 cut(s) 232
Psp6I CCWGG 1 cut(s) 256
PspGI CCWGG 1 cut(s) 256
PspN4I GGNNCC 1 cut(s) 60
PspPI GGNCC 2 cut(s) 58, 251
RsaI GTAC 1 cut(s) 43
RsaNI GTAC 1 cut(s) 42
SaqAI TTAA 1 cut(s) 246
SatI GCNGC 1 cut(s) 6
Sau3AI GATC 1 cut(s) 190
Sau96I GGNCC 2 cut(s) 58, 251
SchI GAGTC 1 cut(s) 232
ScrFI CCNGG 2 cut(s) 62, 258
SetI ASST 4 cut(s) 40, 253, 259, 270
SfaNI GCATC 2 cut(s) 23, 55
SinI GGWCC 2 cut(s) 58, 251
Sse9I AATT 1 cut(s) 213
SsiI CCGC 2 cut(s) 5, 280
SspMI CTAG 2 cut(s) 35, 75
StyD4I CCNGG 2 cut(s) 60, 256
TaqI TCGA 1 cut(s) 122
TasI AATT 1 cut(s) 213
TauI GCSGC 1 cut(s) 8
TfiI GAWTC 1 cut(s) 119
Tru1I TTAA 1 cut(s) 246
Tru9I TTAA 1 cut(s) 246
TseFI GTSAC 1 cut(s) 24
Tsp45I GTSAC 1 cut(s) 24
VpaK11BI GGWCC 2 cut(s) 58, 251
XagI CCTNNNNNAGG 1 cut(s) 246
XcmI CCANNNNNNNNNTGG 1 cut(s) 52
XspI CTAG 2 cut(s) 35, 75
Zsp2I ATGCAT 1 cut(s) 70
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.