Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001276

Physical Location & Seq

Genomic Coordinates Reverse (-)

24899606 .. 24903131

Gene Structure 3526 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G61990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2925 bp

ATGATGGGATCGATGTTGTTCAGGAAGAGAACTTTGGTCACGAGAGCGAATTTTTTACTTTTCCGGTCGTTTTCCGTTAACGTTGAGAAACTTTCCGACGCATCAGCTGAAATAGCGGGAATTCTCAAGCAAGAGAACTGGCGTGACACTCTGGTATCTTCGAATCTTTCAATCGAGATAAATCCAGAAGTAGTTCTCTCCGTTTTACGATCCAAACGCGTCGATGATCCCTCTAAGCTTTTGAGTTTCTTCAACTGGGTCGATTCTCAAAAAGTCACAGAGCAGAAATTGGATTCGTTTTCGTTTCTCGCTTTGGATTTGTGTAATTTCGGTAGTTTTGAGAAAGCTCTTAGTGTTGTAGAACGGATGATTGAGAGAAATTGGCCTGTAGCTGAGGTTTGGAGTTCGATTGTGAGATGTTCACAAGAGTTTGTGGGAAAGAGTGATGATGGAGTTCTATTTGGGATATTGTTTGATGGATACATTGCAAAAGGGTATATAGAAGAAGCTGTGTTTGTGTTTTCTAGCTCTATGGGTTTGGAATTGGTTCCTCGTTTGTCACGATGTAAAGTTTTGTTGGATGCGTTGTTGAGGTGGAACCGGCTGGATTTGTTTTGGGATGTGTATAAGGGGATGGTTGAGAGAAATGTAGTATTTGATGTTAAGACCTATCATATGTTGATTATTGCTCATTGTAGGGCTGGGAATGTTCAGTTGGGGAAAGATGTTCTTTTTAAAACGGAAAAAGAATTCAGGACGGCTACTTTGAATGTGGATGGAGCACTTAAGCTTAAGGAGTCGATGATTTGCAAAGGATTGGTGCCATTGAAGTATACATACGATGTACTTATAGATGGGTTGTGTAAGATAAAGAGACTAGAAGATGCTAAATCGTTGCTGGTAGAGATGGATAGTTTAGGTGTGTCTCTTGATAATCATACTTATAGTTTACTGATTGATGGCTTACTGAAGGGTAGAAATGCAGATGCTGCGAAAGGACTAGTCCATGAGATGGTTTCACATGGTATTAACATCAAACCTTATATGTATGATTGTTGTATTTGTGTGATGTCAAAGGAAGGGGTGATGGAGAAGGCAAAGGCTCTCTTTGATGGAATGATCGCATCCGGACTGATACCACAGGCTCAGGCTTATGCTAGTCTGATCGAAGGATACTGTCGAGAAAAGAATGTACGTCAGGGTTATGAGTTACTTGTTGAAATGAAAAAGAGGAACATTGTCATATCTCCATATACTTATGGTACAGTGGTGAAAGGCATGTGCTCTTCTGGGGATCTCGATGGAGCTTATAACATTGTGAAGGAAATGATTGCAAGTGGTTGCAGACCCAATGTGGTTATATATACCACATTGATCAAAACCTTTCTCCAGAATAGTAGGTTTGGAGATGCAATGAGGGTGTTAAAAGAAATGAAAGAACAAGGAATCGCACCAGACATATTTTGCTACAATTCCCTTATAATTGGCCTTTCAAAAGCTAAAAGAATGGACGAAGCAAGGTCTTTTCTGGTTGAAATGGTCGAGAACGGATTAAAGCCTAATGCTTTCACCTATGGGGCTTTTATCAGTGGATATATAGAGGCAAGTGAATTTGCATCTGCAGATAAGTATGTGAAAGAGATGCGGGAATGTGGCGTACTTCCAAATAAGGTTCTTTGCACGGGTTTGATCAATGAGTATTGCAAAAAGGGGAAAGTAATAGAGGCGTGTTCAGCATATAGATCCATGGTTGACCAAGGGATCCTGGGGGATGCTAAAACATACACTGTTCTTATGAATGGTCTTTTTAAAAATGATAAAGTAGATGATGCCGAGGAGATTTTCCGCGAAATGCGTGGGAAGGGTATTGCACCTGATGTATTCTCTTATGGTGTTCTCATTAATGGATTTTCTAAGTTGGGAAATATGCAGAAGGCTTCTAGTATTTTTGATGAGATGGTTGAAGAAGGTTTGACTCCTAATGTTATCATATACAACATGTTACTTGGTGGCTTTTGCAGATCTGGTGAAATTGAAAAAGCTAAGGAACTGCTTGATGAAATGTCAGTTAAAGGTCTTCACCCGAATGCAGTGACCTACTGTACAATTATAGATGGATATTGCAAATCTGGGGATCTAGCTGAGGCTTTTCGGTTATTTGATGAGATGAAACTAAAGGGATTAGTTCCTGATAGTTTTGTGTACACAACACTCGTGGATGGGTGTTGCAGATTGAACGATGTGGAAAGAGCTATAACCATCTTTGGGACAAACAAGAAGGGCTGTGCTTCTAGTACCGCCCCTTTCAATGCTTTGATCAATTGGGTTTTTAAGTTTGGAAAAACAGAATTAAAAACAGAAGTGTTAAATCGGCTAATGGATGGGTCGTTTGATAGGTTTGGCAAGCCCAATGACGTAACATACAACATTATGATTGATTATCTATGCAAGGAAGGAAACTTGGAAGCTGCAAAGGAGCTCTTTCACCAGATGCAGAACGCTAATCTGATGCCTACTGTTATAACTTACACATCTCTTCTAAACGGGTATGATAAAATGGGTAGAAGAGCTGAAATGTTTCCTGTATTTGATGAGGCGATTGCTGCAGGAATTGAACCAGACCACATAATGTATAGTGTTATCATCAATGCTTTCCTGAAAGAAGGGATGACGACAAAAGCACTTGTGCTTGTGGATCAAATGTTTGCTAAGAACGCTGTTGATGATGGGTGTAAGCTAAGTATTTCAACATGCCGGGCTCTACTCTCTGGTTTTGCTAAAGTGGGAGAAATGGAGGTAGCTGAGAAGGTTATGGAGAACATGGTTCGACTCCAATATATTCCTGATTCTGCGACTGTTATTGAGTTAATCAATGAAAGTTGCATTTCCTCAAACCAAAGAGTGGAAGCTGATGCAGTTCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00260 ko00261 ko00270 ko00300 ko01100 ko01110 ko01120 ko01130 ko01210 ko01230 map00260 map00261 map00270 map00300 map01100 map01110 map01120 map01130 map01210 map01230

Pfam Domains

Protein Families

Mem_trans PPR PPR_1 PPR_2 PPR_3 PPR_long

Protein Analysis

974

Amino Acids

108.81

Weight (kDa)

5.7

Isoelectric Point (pI)

28.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_1	PF12854	271 - 303	1.3e-06	PPR repeat
PPR_2	PF13041	279 - 324	1.7e-11	PPR repeat family
PPR_2	PF13041	383 - 428	6e-11	PPR repeat family
PPR_long	PF17177	393 - 506	1.5e-08	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	404 - 462	4e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	415 - 443	9.7e-06	PPR repeat
PPR_3	PF13812	439 - 494	4e-12	Pentatricopeptide repeat domain
PPR_1	PF12854	447 - 479	6.6e-07	PPR repeat
PPR_2	PF13041	450 - 499	7.6e-14	PPR repeat family
PPR_1	PF12854	482 - 514	2.1e-06	PPR repeat
PPR_2	PF13041	485 - 532	1.3e-12	PPR repeat family
PPR	PF01535	489 - 518	2.8e-06	PPR repeat
PPR_2	PF13041	555 - 604	5.5e-11	PPR repeat family
PPR_long	PF17177	565 - 721	3.4e-11	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	581 - 637	6.3e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	587 - 619	7.7e-07	PPR repeat
PPR_2	PF13041	594 - 639	8.6e-14	PPR repeat family
PPR	PF01535	594 - 623	1.1e-07	PPR repeat
PPR_1	PF12854	621 - 654	1.3e-07	PPR repeat
PPR_2	PF13041	625 - 662	8.6e-09	PPR repeat family
PPR_3	PF13812	626 - 671	3.4e-08	Pentatricopeptide repeat domain
PPR	PF01535	628 - 658	1.7e-07	PPR repeat
PPR_1	PF12854	657 - 689	8.3e-12	PPR repeat
PPR_2	PF13041	660 - 709	7.4e-18	PPR repeat family
PPR	PF01535	664 - 693	7.1e-07	PPR repeat
PPR_3	PF13812	684 - 730	2.9e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	691 - 724	6.2e-16	PPR repeat
PPR	PF01535	698 - 728	1.2e-09	PPR repeat
PPR_2	PF13041	698 - 744	1.3e-17	PPR repeat family
PPR_1	PF12854	726 - 755	1.9e-07	PPR repeat
PPR_long	PF17177	737 - 900	2.4e-08	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	802 - 832	6.4e-11	PPR repeat
PPR_3	PF13812	802 - 850	4.4e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	803 - 850	7.6e-17	PPR repeat family
PPR	PF01535	806 - 835	1.1e-07	PPR repeat
PPR_3	PF13812	827 - 885	6.4e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	838 - 887	4.4e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001276)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G61990
fragaria_vesca	FvH4_5g09340 FvH4_5g09340 FvH4_5g09340 FvH4_5g09340
malus_domestica	MD06G1131900.v1.1 MD14G1148300.v1.1
prunus_persica	Prupe.5G142900_v2.0.a1 Prupe.5G142900_v2.0.a1
pyrus_communis	pycom06g12350 pycom14g12300
rosa_chinensis	RchiOBHm_Chr1g0325241 RchiOBHm_Chr1g0325261 RchiOBHm_Chr2g0162681 RchiOBHm_Chr7g0188811 RchiOBHm_Chr7g0229441
rosa_laevigata	RLG00000004657 RLG00000028121 RLG00000028122 RLG00000031426 RLG00000035825
rosa_multiflora	Rmu_sc0001621.1_g000013 Rmu_sc0001918.1_g000006 Rmu_sc0004279.1_g000018 Rmu_sc0034360.1_g000001 Rmu_sc0034361.1_g000001
rosa_roxburghii	Rroxscaffold_3G00266000 Rroxscaffold_5G00381140
rosa_rugosa	Rorug02G0360500 Rorug05G0369000 Rorug06G0494100 Rorug07G0156300
rosa_samantha	Rh1BG033100 Rh2CG348200 Rh2CG348300 Rh4AG001800 Rh4AG163800 Rh4BG001600 Rh4BG400000 Rh4BG400100 Rh4CG415000 Rh4CG415100 Rh6DG332400 Rh6DG332500 Rh7AG098900 Rh7AG408500 Rh7BG100600 Rh7CG102100 Rh7CG477400 Rh7DG100700 Rh7DG406300 Rh7DG406400 Rh7DG446700
rosa_wichuraiana	Rw0G022150 Rw7G008520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	1311, 1481, 2522
AccB1I	GGYRCC	1 cut(s)	820
AccB7I	CCANNNNNTGG	2 cut(s)	1012, 2902
AccI	GTMKAC	1 cut(s)	833
AccII	CGCG	2 cut(s)	219, 1848
AccIII	TCCGGA	1 cut(s)	1127
AciI	CCGC	4 cut(s)	116, 1645, 1846, 2298
AclI	AACGTT	1 cut(s)	81
AclWI	GGATC	9 cut(s)	16, 204, 221, 1302, 1737, 1756, 1769, 2142, 2703
AcsI	RAATTY	4 cut(s)	49, 120, 749, 1610
AcuI	CTGAAG	1 cut(s)	989
AfaI	GTAC	7 cut(s)	846, 1194, 1264, 1659, 2104, 2204, 2296
AfiI	CCNNNNNNNGG	3 cut(s)	1012, 2265, 2902
AflII	CTTAAG	2 cut(s)	785, 791
AflIII	ACRYGT	2 cut(s)	217, 1998
AhlI	ACTAGT	1 cut(s)	1000
AjnI	CCWGG	1 cut(s)	1764
AjuI	GAANNNNNNNTTGG	4 cut(s)	17, 49, 698, 730
Alw21I	GWGCWC	3 cut(s)	784, 1286, 2481
Alw26I	GTCTC	2 cut(s)	868, 930
AlwI	GGATC	9 cut(s)	16, 204, 221, 1302, 1737, 1756, 1769, 2142, 2703
AlwNI	CAGNNNCTG	1 cut(s)	989
Aor13HI	TCCGGA	1 cut(s)	1127
AoxI	GGCC	2 cut(s)	383, 1486
ApeKI	GCWGC	3 cut(s)	989, 2468, 2603
ApoI	RAATTY	4 cut(s)	49, 120, 749, 1610
ArsI	GACNNNNNNTTYG	2 cut(s)	748, 780
AseI	ATTAAT	1 cut(s)	1902
Asp700I	GAANNNNTTC	3 cut(s)	192, 546, 2577
AsuC2I	CCSGG	1 cut(s)	2756
AsuHPI	GGTGA	6 cut(s)	1096, 1282, 1561, 2039, 2072, 2477
AsuII	TTCGAA	1 cut(s)	161
BaeI	ACNNNNGTAYC	4 cut(s)	138, 171, 1254, 1287
BamHI	GGATCC	1 cut(s)	1761
BanI	GGYRCC	1 cut(s)	820
BanII	GRGCYC	2 cut(s)	2481, 2761
BarI	GAAGNNNNNNTAC	2 cut(s)	821, 853
BauI	CACGAG	2 cut(s)	40, 2213
BbsI	GAAGAC	1 cut(s)	2069
Bbv12I	GWGCWC	3 cut(s)	784, 1286, 2481
BbvCI	CCTCAGC	2 cut(s)	393, 2142
BbvI	GCAGC	3 cut(s)	976, 2455, 2590
BceAI	ACGGC	1 cut(s)	774
BciT130I	CCWGG	1 cut(s)	1766
BciVI	GTATCC	2 cut(s)	473, 1166
BclI	TGATCA	3 cut(s)	1374, 1689, 2316
BcnI	CCSGG	1 cut(s)	2756
BcoDI	GTCTC	2 cut(s)	868, 930
BcuI	ACTAGT	1 cut(s)	1000
BfaI	CTAG	7 cut(s)	525, 878, 1001, 1158, 1941, 2138, 2292
BfmI	CTRYAG	3 cut(s)	387, 1620, 2604
BfrI	CTTAAG	2 cut(s)	785, 791
BfuI	GTATCC	2 cut(s)	473, 1166
BglII	AGATCT	1 cut(s)	2021
BisI	GCNGC	3 cut(s)	990, 2469, 2604
BlsI	GCNGC	3 cut(s)	991, 2470, 2605
Bme1390I	CCNGG	2 cut(s)	1766, 2756
BmiI	GGNNCC	4 cut(s)	549, 599, 822, 1763
BmrFI	CCNGG	2 cut(s)	1766, 2756
BmrI	ACTGGG	1 cut(s)	265
BmuI	ACTGGG	1 cut(s)	265
BpiI	GAAGAC	1 cut(s)	2069
BpmI	CTGGAG	1 cut(s)	1373
Bpu10I	CCTNAGC	4 cut(s)	393, 1146, 2043, 2142
Bpu14I	TTCGAA	1 cut(s)	161
BpuEI	CTTGAG	1 cut(s)	110
BpuMI	CCSGG	1 cut(s)	2756
Bsa29I	ATCGAT	1 cut(s)	11
BsaJI	CCNNGG	4 cut(s)	1746, 1756, 1765, 1833
BsaWI	WCCGGW	2 cut(s)	63, 1127
Bsc4I	CCNNNNNNNGG	3 cut(s)	1012, 2265, 2902
Bse118I	RCCGGY	1 cut(s)	600
Bse1I	ACTGG	2 cut(s)	143, 260
Bse3DI	GCAATG	2 cut(s)	483, 1419
BseAI	TCCGGA	1 cut(s)	1127
BseBI	CCWGG	1 cut(s)	1766
BseCI	ATCGAT	1 cut(s)	11
BseDI	CCNNGG	4 cut(s)	1746, 1756, 1765, 1833
BseLI	CCNNNNNNNGG	3 cut(s)	1012, 2265, 2902
BseMI	GCAATG	2 cut(s)	483, 1419
BseMII	CTCAG	4 cut(s)	384, 1160, 2133, 2793
BseNI	ACTGG	2 cut(s)	143, 260
BseRI	GAGGAG	1 cut(s)	1850
BseXI	GCAGC	3 cut(s)	976, 2455, 2590
BseYI	CCCAGC	1 cut(s)	701
Bsh1236I	CGCG	2 cut(s)	219, 1848
Bsh1285I	CGRYCG	1 cut(s)	68
BshFI	GGCC	2 cut(s)	385, 1488
BshNI	GGYRCC	1 cut(s)	820
BshVI	ATCGAT	1 cut(s)	11
BsiEI	CGRYCG	1 cut(s)	68
BsiHKAI	GWGCWC	3 cut(s)	784, 1286, 2481
BsiSI	CCGG	4 cut(s)	64, 601, 1128, 2755
BslFI	GGGAC	1 cut(s)	2281
BslI	CCNNNNNNNGG	3 cut(s)	1012, 2265, 2902
BsmAI	GTCTC	2 cut(s)	868, 930
BsmFI	GGGAC	1 cut(s)	2281
BsmI	GAATGC	1 cut(s)	2092
BsnI	GGCC	2 cut(s)	385, 1488
Bsp119I	TTCGAA	1 cut(s)	161
Bsp1286I	GDGCHC	4 cut(s)	784, 1286, 2481, 2761
Bsp13I	TCCGGA	1 cut(s)	1127
Bsp1407I	TGTACA	2 cut(s)	2102, 2202
Bsp19I	CCATGG	1 cut(s)	1746
BspACI	CCGC	4 cut(s)	116, 1645, 1846, 2298
BspANI	GGCC	2 cut(s)	385, 1488
BspCNI	CTCAG	4 cut(s)	385, 1159, 2134, 2794
BspDI	ATCGAT	1 cut(s)	11
BspEI	TCCGGA	1 cut(s)	1127
BspFNI	CGCG	2 cut(s)	219, 1848
BspLI	GGNNCC	4 cut(s)	549, 599, 822, 1763
BspMAI	CTGCAG	2 cut(s)	1624, 2608
BspPI	GGATC	9 cut(s)	16, 204, 221, 1302, 1737, 1756, 1769, 2142, 2703
BspQI	GCTCTTC	2 cut(s)	1291, 2560
BspT104I	TTCGAA	1 cut(s)	161
BspT107I	GGYRCC	1 cut(s)	820
BspTI	CTTAAG	2 cut(s)	785, 791
BsrDI	GCAATG	2 cut(s)	483, 1419
BsrFI	RCCGGY	1 cut(s)	600
BsrGI	TGTACA	2 cut(s)	2102, 2202
BsrI	ACTGG	2 cut(s)	143, 260
BssAI	RCCGGY	1 cut(s)	600
BssECI	CCNNGG	4 cut(s)	1746, 1756, 1765, 1833
BssNAI	GTATAC	1 cut(s)	834
BssSI	CACGAG	2 cut(s)	40, 2213
BssT1I	CCWWGG	2 cut(s)	1746, 1756
Bst1107I	GTATAC	1 cut(s)	834
Bst2BI	CACGAG	2 cut(s)	40, 2213
Bst2UI	CCWGG	1 cut(s)	1766
Bst4CI	ACNGT	6 cut(s)	1178, 1267, 1789, 2102, 2518, 2857
Bst6I	CTCTTC	4 cut(s)	20, 1291, 2541, 2560
BstAFI	CTTAAG	2 cut(s)	785, 791
BstAPI	GCANNNNNTGC	1 cut(s)	989
BstAUI	TGTACA	2 cut(s)	2102, 2202
BstBI	TTCGAA	1 cut(s)	161
BstC8I	GCNNGC	1 cut(s)	2405
BstDSI	CCRYGG	1 cut(s)	1746
BstFNI	CGCG	2 cut(s)	219, 1848
BstMAI	GTCTC	2 cut(s)	868, 930
BstMCI	CGRYCG	1 cut(s)	68
BstMWI	GCNNNNNNNGC	5 cut(s)	113, 989, 1733, 2603, 2714
BstNI	CCWGG	1 cut(s)	1766
BstNSI	RCATGY	3 cut(s)	1282, 2002, 2754
BstSCI	CCNGG	2 cut(s)	1764, 2754
BstSFI	CTRYAG	3 cut(s)	387, 1620, 2604
BstUI	CGCG	2 cut(s)	219, 1848
BstV1I	GCAGC	3 cut(s)	976, 2455, 2590
BstV2I	GAAGAC	1 cut(s)	2069
BstX2I	RGATCY	5 cut(s)	1294, 1742, 1761, 2021, 2134
BstYI	RGATCY	5 cut(s)	1294, 1742, 1761, 2021, 2134
BstZ17I	GTATAC	1 cut(s)	834
Bsu15I	ATCGAT	1 cut(s)	11
BsuI	GTATCC	2 cut(s)	473, 1166
BsuRI	GGCC	2 cut(s)	385, 1488
BsuTUI	ATCGAT	1 cut(s)	11
BtgI	CCRYGG	1 cut(s)	1746
BtsI	GCAGTG	1 cut(s)	2097
BtsIMutI	CAGTG	4 cut(s)	1272, 1594, 1785, 2097
Cac8I	GCNNGC	1 cut(s)	2405
CaiI	CAGNNNCTG	1 cut(s)	989
Cfr10I	RCCGGY	1 cut(s)	600
ClaI	ATCGAT	1 cut(s)	11
CseI	GACGC	2 cut(s)	107, 208
Csp6I	GTAC	7 cut(s)	845, 1193, 1263, 1658, 2103, 2203, 2295
CspCI	CAANNNNNGTGG	2 cut(s)	2196, 2231
CviAII	CATG	7 cut(s)	1007, 1022, 1279, 1747, 1999, 2751, 2821
CviQI	GTAC	7 cut(s)	845, 1193, 1263, 1658, 2103, 2203, 2295
DraI	TTTAAA	2 cut(s)	736, 1810
Eam1104I	CTCTTC	4 cut(s)	20, 1291, 2541, 2560
EarI	CTCTTC	4 cut(s)	20, 1291, 2541, 2560
Ecl136II	GAGCTC	1 cut(s)	2479
Eco130I	CCWWGG	2 cut(s)	1746, 1756
Eco24I	GRGCYC	2 cut(s)	2481, 2761
Eco53kI	GAGCTC	1 cut(s)	2479
Eco57I	CTGAAG	1 cut(s)	989
EcoICRI	GAGCTC	1 cut(s)	2479
EcoRI	GAATTC	2 cut(s)	120, 749
EcoRII	CCWGG	1 cut(s)	1764
EcoT14I	CCWWGG	2 cut(s)	1746, 1756
EcoT38I	GRGCYC	2 cut(s)	2481, 2761
ErhI	CCWWGG	2 cut(s)	1746, 1756
FaeI	CATG	7 cut(s)	1010, 1025, 1282, 1750, 2002, 2754, 2824
FalI	AAGNNNNNCTT	6 cut(s)	714, 746, 1091, 1123, 2465, 2497
FaqI	GGGAC	1 cut(s)	2281
FatI	CATG	7 cut(s)	1006, 1021, 1278, 1746, 1998, 2750, 2820
FauI	CCCGC	2 cut(s)	109, 1638
FauNDI	CATATG	1 cut(s)	675
FbaI	TGATCA	3 cut(s)	1374, 1689, 2316
FblI	GTMKAC	1 cut(s)	833
Fnu4HI	GCNGC	3 cut(s)	990, 2469, 2604
FriOI	GRGCYC	2 cut(s)	2481, 2761
Fsp4HI	GCNGC	3 cut(s)	990, 2469, 2604
FspBI	CTAG	7 cut(s)	525, 878, 1001, 1158, 1941, 2138, 2292
GluI	GCNGC	3 cut(s)	990, 2469, 2604
GsaI	CCCAGC	1 cut(s)	705
GsuI	CTGGAG	1 cut(s)	1373
HaeIII	GGCC	2 cut(s)	385, 1488
HapII	CCGG	4 cut(s)	64, 601, 1128, 2755
HgaI	GACGC	2 cut(s)	107, 208
Hin1II	CATG	7 cut(s)	1010, 1025, 1282, 1750, 2002, 2754, 2824
HincII	GTYRAC	2 cut(s)	79, 1753
HindII	GTYRAC	2 cut(s)	79, 1753
HindIII	AAGCTT	2 cut(s)	236, 788
HinfI	GANTC	8 cut(s)	163, 263, 293, 797, 1446, 1975, 2829, 2846
HpaI	GTTAAC	1 cut(s)	79
HpaII	CCGG	4 cut(s)	64, 601, 1128, 2755
HphI	GGTGA	6 cut(s)	1096, 1282, 1561, 2039, 2072, 2477
Hpy166II	GTNNAC	7 cut(s)	79, 422, 834, 950, 1753, 2203, 2205
Hpy188I	TCNGA	3 cut(s)	97, 1164, 2508
Hpy8I	GTNNAC	7 cut(s)	79, 422, 834, 950, 1753, 2203, 2205
Hpy99I	CGWCG	2 cut(s)	101, 224
HpyCH4III	ACNGT	6 cut(s)	1178, 1267, 1789, 2102, 2518, 2857
HpyCH4IV	ACGT	3 cut(s)	81, 1195, 2415
HpyF10VI	GCNNNNNNNGC	5 cut(s)	113, 989, 1733, 2603, 2714
HpySE526I	ACGT	3 cut(s)	81, 1195, 2415
Hsp92II	CATG	7 cut(s)	1010, 1025, 1282, 1750, 2002, 2754, 2824
Kpn2I	TCCGGA	1 cut(s)	1127
Ksp22I	TGATCA	3 cut(s)	1374, 1689, 2316
KspAI	GTTAAC	1 cut(s)	79
LguI	GCTCTTC	2 cut(s)	1291, 2560
LmnI	GCTCC	3 cut(s)	779, 1304, 2476
Lsp1109I	GCAGC	3 cut(s)	976, 2455, 2590
MaeI	CTAG	7 cut(s)	525, 878, 1001, 1158, 1941, 2138, 2292
MaeII	ACGT	3 cut(s)	81, 1195, 2415
MaeIII	GTNAC	8 cut(s)	37, 143, 274, 558, 1209, 2001, 2092, 2416
MfeI	CAATTG	1 cut(s)	2320
MflI	RGATCY	5 cut(s)	1294, 1742, 1761, 2021, 2134
MhlI	GDGCHC	4 cut(s)	784, 1286, 2481, 2761
MluI	ACGCGT	1 cut(s)	217
MlyI	GAGTC	3 cut(s)	806, 1969, 2823
MmeI	TCCRAC	2 cut(s)	120, 558
MroI	TCCGGA	1 cut(s)	1127
MroXI	GAANNNNTTC	3 cut(s)	192, 546, 2577
MslI	CAYNNNNRTG	1 cut(s)	2085
MspA1I	CMGCKG	1 cut(s)	107
MspCI	CTTAAG	2 cut(s)	785, 791
MspI	CCGG	4 cut(s)	64, 601, 1128, 2755
MspR9I	CCNGG	2 cut(s)	1766, 2756
MunI	CAATTG	1 cut(s)	2320
Mva1269I	GAATGC	1 cut(s)	2092
MvaI	CCWGG	1 cut(s)	1766
MvnI	CGCG	2 cut(s)	219, 1848
MwoI	GCNNNNNNNGC	5 cut(s)	113, 989, 1733, 2603, 2714
NciI	CCSGG	1 cut(s)	2756
NcoI	CCATGG	1 cut(s)	1746
NdeI	CATATG	1 cut(s)	675
NlaIII	CATG	7 cut(s)	1010, 1025, 1282, 1750, 2002, 2754, 2824
NlaIV	GGNNCC	4 cut(s)	549, 599, 822, 1763
NmeAIII	GCCGAG	1 cut(s)	1858
NmuCI	GTSAC	5 cut(s)	37, 143, 274, 558, 2092
NspI	RCATGY	3 cut(s)	1282, 2002, 2754
NspV	TTCGAA	1 cut(s)	161
PciI	ACATGT	1 cut(s)	1998
PciSI	GCTCTTC	2 cut(s)	1291, 2560
PcsI	WCGNNNNNNNCGW	1 cut(s)	559
PctI	GAATGC	1 cut(s)	2092
PdmI	GAANNNNTTC	3 cut(s)	192, 546, 2577
PfeI	GAWTC	5 cut(s)	163, 263, 293, 1446, 2846
PflMI	CCANNNNNTGG	2 cut(s)	1012, 2902
PkrI	GCNGC	3 cut(s)	991, 2470, 2605
PleI	GAGTC	3 cut(s)	805, 1969, 2823
PpsI	GAGTC	3 cut(s)	805, 1969, 2823
PscI	ACATGT	1 cut(s)	1998
PshBI	ATTAAT	1 cut(s)	1902
PsiI	TTATAA	3 cut(s)	1311, 1481, 2522
Psp124BI	GAGCTC	1 cut(s)	2481
Psp1406I	AACGTT	1 cut(s)	81
Psp6I	CCWGG	1 cut(s)	1764
PspFI	CCCAGC	1 cut(s)	701
PspGI	CCWGG	1 cut(s)	1764
PspN4I	GGNNCC	4 cut(s)	549, 599, 822, 1763
PstI	CTGCAG	2 cut(s)	1624, 2608
PstNI	CAGNNNCTG	1 cut(s)	989
PsuI	RGATCY	5 cut(s)	1294, 1742, 1761, 2021, 2134
PvuII	CAGCTG	1 cut(s)	107
RsaI	GTAC	7 cut(s)	846, 1194, 1264, 1659, 2104, 2204, 2296
RsaNI	GTAC	7 cut(s)	845, 1193, 1263, 1658, 2103, 2203, 2295
RseI	CAYNNNNRTG	1 cut(s)	2085
SacI	GAGCTC	1 cut(s)	2481
SapI	GCTCTTC	2 cut(s)	1291, 2560
SatI	GCNGC	3 cut(s)	990, 2469, 2604
SchI	GAGTC	3 cut(s)	806, 1969, 2823
ScrFI	CCNGG	2 cut(s)	1766, 2756
SduI	GDGCHC	4 cut(s)	784, 1286, 2481, 2761
SfcI	CTRYAG	3 cut(s)	387, 1620, 2604
SfuI	TTCGAA	1 cut(s)	161
SmiMI	CAYNNNNRTG	1 cut(s)	2085
SmlI	CTYRAG	3 cut(s)	125, 785, 791
SmoI	CTYRAG	3 cut(s)	125, 785, 791
SpeI	ACTAGT	1 cut(s)	1000
SsiI	CCGC	4 cut(s)	116, 1645, 1846, 2298
SspMI	CTAG	7 cut(s)	525, 878, 1001, 1158, 1941, 2138, 2292
SstI	GAGCTC	1 cut(s)	2481
StyD4I	CCNGG	2 cut(s)	1764, 2754
StyI	CCWWGG	2 cut(s)	1746, 1756
TaaI	ACNGT	6 cut(s)	1178, 1267, 1789, 2102, 2518, 2857
TaiI	ACGT	3 cut(s)	84, 1198, 2418
TatI	WGTACW	3 cut(s)	844, 2102, 2202
TfiI	GAWTC	5 cut(s)	163, 263, 293, 1446, 2846
TscAI	CASTG	4 cut(s)	1272, 1594, 1792, 2097
TseFI	GTSAC	5 cut(s)	37, 143, 274, 558, 2092
TseI	GCWGC	3 cut(s)	989, 2468, 2603
Tsp45I	GTSAC	5 cut(s)	37, 143, 274, 558, 2092
TspDTI	ATGAA	6 cut(s)	1238, 1448, 1811, 2073, 2183, 2889
TspGWI	ACGGA	5 cut(s)	64, 190, 379, 755, 1563
TspRI	CASTG	4 cut(s)	1272, 1594, 1792, 2097
Van91I	CCANNNNNTGG	2 cut(s)	1012, 2902
Vha464I	CTTAAG	2 cut(s)	785, 791
VspI	ATTAAT	1 cut(s)	1902
XapI	RAATTY	4 cut(s)	49, 120, 749, 1610
XceI	RCATGY	3 cut(s)	1282, 2002, 2754
XmiI	GTMKAC	1 cut(s)	833
XmnI	GAANNNNTTC	3 cut(s)	192, 546, 2577
XspI	CTAG	7 cut(s)	525, 878, 1001, 1158, 1941, 2138, 2292

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.