Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0000187

Physical Location & Seq

Genomic Coordinates Reverse (-)

45624368 .. 45630272

Gene Structure 5905 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0360500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1143 bp

ATGGCCTTCTCCTCTTCTACTCTCTCCCCACATTGCTCCACCCAACACCCTCTCATTCTCCCCCGCACTCCTCTCTCTTCACTACCCAAAACCACCACCGCCACTTTCTTCACAACCTCATCATCATTCCGAGCTCTCCCACTCAACACCAGCACAAGAATCCAATGCGTCGACAAAGCTTCAAGTCTTGACCCCAAGACCGGCGTCGCAGTCTACAAGCCCAAGTCGTATGAAGTTCTCGTTACTGACGCTGCGAATTCACTTGCCTATGCTCTTGAAGATGGCAAGACCCGCTTGGAGATTGATTTCCCGCCCCTTCCTAGCAACATATCTTCCTATAAGGGGTCTTCAGATGACTTCATTGATGCCAATGTTCAACTCGCCTTGACTGTTGTAAGGAAGCTGAAAGAGAGAAAGGAGATGAAAGTTTGTATTGTGTTTCCGGATAAGCCAGAAAGGCGCAGGGCTTCTGAGATGTTTAAAACAGCTATTGACTCGATTGGTGATCTAACCATAGGTTCCCTTGATGATGTTCCTGGTGGTCCAGTCACCATGTTCTTCAGATCCATAAGGAACACACTTGATTTTGATTTCGAAGATGAAAATGAAGGTCGCTGGGCATCCAATGAGCCTCCTTCTCTTTATATGTTCATTAATTGTAGCACGCGAGAACTTGCTGGAATTGAGAAGTTTGTGGAACAATTTGCCATGTCAACCCCAGCACTTCTATTCAATCTCGAACTTGACACATTGCGTGCTGACTTGGGCCTTGTGGGCTTTCCAACCAAGGATTTGCATTATCGATTTCTTTCACAATTTATTCCAGTGTTCTACATTCGAATAAGAGAGTACTCGAAGACAGTAGCAGTAGCGCCTTATATAGTGAATTACAATGGAGCATTATTTCGCCAATACCCTGGGCCTTGGCAGGTAATGCTCAAACAAGCAGATGGTTCTTTTGCTTGCGTAGCAGAGAGTGCAACACGCTTCACTCTGGGTGAAACGAAAGAAGAACTGTTGAGGGTCTTGGGACTTAAAGAGGAAGAAGGAAGCTCGCTGGAATTTCTTCGTAGAGGCTACAAGTCTGCTACTTGGTGGGAAGAAGATGTTGAGTTGGAATTGTCTTCTGCTTGGCGTAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00260 ko00261 ko00270 ko00300 ko01100 ko01110 ko01120 ko01130 ko01210 ko01230 map00260 map00261 map00270 map00300 map01100 map01110 map01120 map01130 map01210 map01230

Pfam Domains

Protein Families

Mem_trans PPR PPR_1 PPR_2 PPR_3 PPR_long

Protein Analysis

380

Amino Acids

42.73

Weight (kDa)

5.41

Isoelectric Point (pI)

42.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF1995	PF09353	74 - 336	1.4e-47	Domain of unknown function (DUF1995)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000187)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g20170 FvH4_4g06831
rosa_chinensis	RchiOBHm_Chr1g0321991 RchiOBHm_Chr2g0161811
rosa_laevigata	RLG00000015375 RLG00000018377
rosa_multiflora	Rmu_co8011754.1_g000001 Rmu_co8019986.1_g000001 Rmu_co8067766.1_g000001 Rmu_co8156128.1_g000001 Rmu_co8219154.1_g000003 Rmu_co8297235.1_g000001 Rmu_co8345223.1_g000001 Rmu_co8364775.1_g000001 Rmu_co8465075.1_g000001 Rmu_sc0000007.1_g000002 Rmu_sc0000054.1_g000015 Rmu_sc0000054.1_g000023 Rmu_sc0000145.1_g000010 Rmu_sc0000166.1_g000006 Rmu_sc0000218.1_g000012 Rmu_sc0000339.1_g000008 Rmu_sc0000342.1_g000015 Rmu_sc0000464.1_g000008 Rmu_sc0000620.1_g000003 Rmu_sc0000638.1_g000017 Rmu_sc0000890.1_g000007 Rmu_sc0000894.1_g000024 Rmu_sc0000909.1_g000010 Rmu_sc0000928.1_g000020 Rmu_sc0000977.1_g000007 Rmu_sc0001022.1_g000003 Rmu_sc0001035.1_g000037 Rmu_sc0001060.1_g000008 Rmu_sc0001168.1_g000005 Rmu_sc0001173.1_g000022 Rmu_sc0001179.1_g000016 Rmu_sc0001408.1_g000003 Rmu_sc0001455.1_g000005 Rmu_sc0001484.1_g000008 Rmu_sc0001585.1_g000010 Rmu_sc0001702.1_g000030 Rmu_sc0001755.1_g000063 Rmu_sc0001903.1_g000009 Rmu_sc0002099.1_g000001 Rmu_sc0002142.1_g000012 Rmu_sc0002158.1_g000014 Rmu_sc0002307.1_g000009 Rmu_sc0002358.1_g000013 Rmu_sc0002421.1_g000002 Rmu_sc0002426.1_g000003 Rmu_sc0002438.1_g000001 Rmu_sc0002461.1_g000001 Rmu_sc0002508.1_g000003 Rmu_sc0002532.1_g000056 Rmu_sc0002583.1_g000002 Rmu_sc0002927.1_g000033 Rmu_sc0003033.1_g000040 Rmu_sc0003271.1_g000006 Rmu_sc0003381.1_g000006 Rmu_sc0003507.1_g000007 Rmu_sc0003578.1_g000003 Rmu_sc0003693.1_g000004 Rmu_sc0003693.1_g000005 Rmu_sc0003704.1_g000003 Rmu_sc0003840.1_g000002 Rmu_sc0004084.1_g000026 Rmu_sc0004193.1_g000007 Rmu_sc0004234.1_g000033 Rmu_sc0004235.1_g000025 Rmu_sc0004435.1_g000006 Rmu_sc0004727.1_g000003 Rmu_sc0004741.1_g000001 Rmu_sc0004926.1_g000004 Rmu_sc0005365.1_g000001 Rmu_sc0005392.1_g000007 Rmu_sc0005415.1_g000001 Rmu_sc0005539.1_g000007 Rmu_sc0005708.1_g000017 Rmu_sc0006317.1_g000007 Rmu_sc0006453.1_g000054 Rmu_sc0006536.1_g000004 Rmu_sc0006740.1_g000022 Rmu_sc0006763.1_g000012 Rmu_sc0007115.1_g000002 Rmu_sc0007115.1_g000010 Rmu_sc0007129.1_g000017 Rmu_sc0007131.1_g000010 Rmu_sc0008373.1_g000008 Rmu_sc0009005.1_g000008 Rmu_sc0009252.1_g000007 Rmu_sc0009599.1_g000022 Rmu_sc0009785.1_g000027 Rmu_sc0009891.1_g000003 Rmu_sc0010099.1_g000010 Rmu_sc0010266.1_g000008 Rmu_sc0010334.1_g000003 Rmu_sc0010381.1_g000001 Rmu_sc0010496.1_g000003 Rmu_sc0010496.1_g000004 Rmu_sc0010546.1_g000003 Rmu_sc0011482.1_g000006 Rmu_sc0011875.1_g000010 Rmu_sc0011917.1_g000006 Rmu_sc0012293.1_g000004 Rmu_sc0012847.1_g000003 Rmu_sc0013773.1_g000001 Rmu_sc0016060.1_g000003 Rmu_sc0016170.1_g000013 Rmu_sc0016393.1_g000002 Rmu_sc0017589.1_g000001 Rmu_sc0017786.1_g000005 Rmu_sc0018326.1_g000002 Rmu_sc0020760.1_g000001 Rmu_sc0021262.1_g000003 Rmu_sc0023851.1_g000002 Rmu_sc0024044.1_g000001 Rmu_sc0026820.1_g000001 Rmu_sc0032306.1_g000001 Rmu_sc0035666.1_g000001 Rmu_sc0036881.1_g000001 Rmu_sc0037030.1_g000001 Rmu_sc0037158.1_g000001 Rmu_ssc0000016.1_g000002 Rmu_ssc0000044.1_g000012 Rmu_ssc0000044.1_g000014 Rmu_ssc0000050.1_g000064 Rmu_ssc0000064.1_g000022 Rmu_ssc0000154.1_g000037 Rmu_ssc0000178.1_g000013 Rmu_ssc0000217.1_g000022 Rmu_ssc0000392.1_g000004
rosa_roxburghii	Rroxscaffold_3G00242000 Rroxscaffold_3G00242530 Rroxscaffold_6G00406010
rosa_rugosa	Rorug01G0062000 Rorug02G0224000 Rorug02G0262900 Rorug02G0263000 Rorug02G0358900 Rorug02G0360500 Rorug02G0378500.1 Rorug02G0378600 Rorug02G0394700 Rorug03G0122900 Rorug03G0254600 Rorug03G0254700 Rorug03G0254800 Rorug04G0042200.1 Rorug04G0378100 Rorug05G0053400 Rorug05G0238600 Rorug05G0364500 Rorug05G0562000 Rorug06G0089300 Rorug06G0089400 Rorug06G0145700 Rorug07G0111600 Rorug07G0229500.1 Rorug07G0287600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	919
AccI	GTMKAC	2 cut(s)	171, 213
AccII	CGCG	1 cut(s)	667
AccIII	TCCGGA	1 cut(s)	442
AciI	CCGC	4 cut(s)	64, 99, 292, 311
AclWI	GGATC	1 cut(s)	558
AcsI	RAATTY	2 cut(s)	256, 1061
AcuI	CTGAAG	2 cut(s)	333, 544
AcyI	GRCGYC	1 cut(s)	204
AfaI	GTAC	1 cut(s)	851
AfiI	CCNNNNNNNGG	2 cut(s)	200, 342
AgsI	TTSAA	4 cut(s)	183, 278, 377, 733
AjnI	CCWGG	2 cut(s)	535, 916
AluBI	AGCT	5 cut(s)	134, 179, 403, 488, 1053
AluI	AGCT	5 cut(s)	134, 179, 403, 488, 1053
Alw21I	GWGCWC	1 cut(s)	136
AlwI	GGATC	1 cut(s)	558
Aor13HI	TCCGGA	1 cut(s)	442
AoxI	GGCC	3 cut(s)	3, 766, 920
ApeKI	GCWGC	1 cut(s)	251
ApoI	RAATTY	2 cut(s)	256, 1061
AseI	ATTAAT	1 cut(s)	654
Asp700I	GAANNNNTTC	1 cut(s)	1065
AspLEI	GCGC	2 cut(s)	462, 874
AspS9I	GGNCC	3 cut(s)	542, 766, 920
AsuHPI	GGTGA	3 cut(s)	515, 541, 1010
AsuII	TTCGAA	2 cut(s)	594, 838
AvaII	GGWCC	1 cut(s)	542
BanII	GRGCYC	1 cut(s)	136
BbsI	GAAGAC	3 cut(s)	339, 863, 1116
Bbv12I	GWGCWC	1 cut(s)	136
BbvI	GCAGC	1 cut(s)	238
BccI	CCATC	2 cut(s)	275, 944
BciT130I	CCWGG	2 cut(s)	537, 918
BfaI	CTAG	1 cut(s)	321
BfoI	RGCGCY	1 cut(s)	875
BfuAI	ACCTGC	1 cut(s)	919
BglI	GCCNNNNNGGC	2 cut(s)	457, 774
BisI	GCNGC	1 cut(s)	252
BlsI	GCNGC	1 cut(s)	253
BmcAI	AGTACT	1 cut(s)	851
Bme1390I	CCNGG	2 cut(s)	537, 918
Bme18I	GGWCC	1 cut(s)	542
BmgT120I	GGNCC	3 cut(s)	542, 766, 920
BmiI	GGNNCC	1 cut(s)	520
BmrFI	CCNGG	2 cut(s)	537, 918
BmsI	GCATC	2 cut(s)	355, 629
BoxI	GACNNNNGTC	1 cut(s)	203
BpiI	GAAGAC	3 cut(s)	339, 863, 1116
Bpu14I	TTCGAA	2 cut(s)	594, 838
Bsa29I	ATCGAT	1 cut(s)	802
BsaHI	GRCGYC	1 cut(s)	204
BsaJI	CCNNGG	4 cut(s)	786, 916, 917, 923
BsaWI	WCCGGW	1 cut(s)	442
Bsc4I	CCNNNNNNNGG	2 cut(s)	200, 342
Bse118I	RCCGGY	1 cut(s)	200
Bse1I	ACTGG	2 cut(s)	545, 824
Bse3DI	GCAATG	2 cut(s)	31, 749
BseAI	TCCGGA	1 cut(s)	442
BseBI	CCWGG	2 cut(s)	537, 918
BseCI	ATCGAT	1 cut(s)	802
BseDI	CCNNGG	4 cut(s)	786, 916, 917, 923
BseGI	GGATG	1 cut(s)	620
BseLI	CCNNNNNNNGG	2 cut(s)	200, 342
BseMI	GCAATG	2 cut(s)	31, 749
BseMII	CTCAG	1 cut(s)	462
BseNI	ACTGG	2 cut(s)	545, 824
BseRI	GAGGAG	1 cut(s)	60
BseXI	GCAGC	1 cut(s)	238
BseYI	CCCAGC	2 cut(s)	615, 718
Bsh1236I	CGCG	1 cut(s)	667
BshFI	GGCC	3 cut(s)	5, 768, 922
BshVI	ATCGAT	1 cut(s)	802
BsiHKAI	GWGCWC	1 cut(s)	136
BsiSI	CCGG	2 cut(s)	201, 443
BslFI	GGGAC	1 cut(s)	1044
BslI	CCNNNNNNNGG	2 cut(s)	200, 342
BsmFI	GGGAC	1 cut(s)	1044
BsnI	GGCC	3 cut(s)	5, 768, 922
Bsp119I	TTCGAA	2 cut(s)	594, 838
Bsp1286I	GDGCHC	1 cut(s)	136
Bsp13I	TCCGGA	1 cut(s)	442
Bsp143I	GATC	2 cut(s)	505, 563
BspACI	CCGC	4 cut(s)	64, 99, 292, 311
BspANI	GGCC	3 cut(s)	5, 768, 922
BspCNI	CTCAG	1 cut(s)	463
BspDI	ATCGAT	1 cut(s)	802
BspEI	TCCGGA	1 cut(s)	442
BspFNI	CGCG	1 cut(s)	667
BspLI	GGNNCC	1 cut(s)	520
BspMI	ACCTGC	1 cut(s)	919
BspPI	GGATC	1 cut(s)	558
BspT104I	TTCGAA	2 cut(s)	594, 838
BsrDI	GCAATG	2 cut(s)	31, 749
BsrFI	RCCGGY	1 cut(s)	200
BsrI	ACTGG	2 cut(s)	545, 824
BssAI	RCCGGY	1 cut(s)	200
BssECI	CCNNGG	4 cut(s)	786, 916, 917, 923
BssMI	GATC	2 cut(s)	505, 563
BssNI	GRCGYC	1 cut(s)	204
BssT1I	CCWWGG	2 cut(s)	786, 923
Bst2UI	CCWGG	2 cut(s)	537, 918
Bst4CI	ACNGT	3 cut(s)	391, 862, 1017
Bst6I	CTCTTC	2 cut(s)	19, 82
BstACI	GRCGYC	1 cut(s)	204
BstAPI	GCANNNNNTGC	2 cut(s)	934, 977
BstBI	TTCGAA	2 cut(s)	594, 838
BstC8I	GCNNGC	4 cut(s)	665, 756, 964, 1055
BstDEI	CTNAG	1 cut(s)	471
BstF5I	GGATG	1 cut(s)	620
BstFNI	CGCG	1 cut(s)	667
BstH2I	RGCGCY	1 cut(s)	875
BstHHI	GCGC	2 cut(s)	462, 874
BstKTI	GATC	2 cut(s)	508, 566
BstMBI	GATC	2 cut(s)	505, 563
BstMWI	GCNNNNNNNGC	6 cut(s)	291, 457, 774, 934, 968, 977
BstNI	CCWGG	2 cut(s)	537, 918
BstPAI	GACNNNNGTC	1 cut(s)	203
BstSCI	CCNGG	2 cut(s)	535, 916
BstUI	CGCG	1 cut(s)	667
BstV1I	GCAGC	1 cut(s)	238
BstV2I	GAAGAC	3 cut(s)	339, 863, 1116
BstX2I	RGATCY	1 cut(s)	563
BstXI	CCANNNNNNTGG	1 cut(s)	917
BstYI	RGATCY	1 cut(s)	563
Bsu15I	ATCGAT	1 cut(s)	802
BsuRI	GGCC	3 cut(s)	5, 768, 922
BsuTUI	ATCGAT	1 cut(s)	802
BtsCI	GGATG	1 cut(s)	620
BtsIMutI	CAGTG	1 cut(s)	831
BveI	ACCTGC	1 cut(s)	919
Cac8I	GCNNGC	4 cut(s)	665, 756, 964, 1055
CfoI	GCGC	2 cut(s)	462, 874
Cfr10I	RCCGGY	1 cut(s)	200
Cfr13I	GGNCC	3 cut(s)	542, 766, 920
ClaI	ATCGAT	1 cut(s)	802
CseI	GACGC	3 cut(s)	157, 193, 257
Csp6I	GTAC	1 cut(s)	850
CviAII	CATG	2 cut(s)	553, 709
CviQI	GTAC	1 cut(s)	850
DdeI	CTNAG	1 cut(s)	471
DpnI	GATC	2 cut(s)	507, 565
DpnII	GATC	2 cut(s)	505, 563
DraI	TTTAAA	1 cut(s)	481
Eam1104I	CTCTTC	2 cut(s)	19, 82
EarI	CTCTTC	2 cut(s)	19, 82
Ecl136II	GAGCTC	1 cut(s)	134
Eco130I	CCWWGG	2 cut(s)	786, 923
Eco24I	GRGCYC	1 cut(s)	136
Eco47I	GGWCC	1 cut(s)	542
Eco53kI	GAGCTC	1 cut(s)	134
Eco57I	CTGAAG	2 cut(s)	333, 544
EcoICRI	GAGCTC	1 cut(s)	134
EcoRI	GAATTC	1 cut(s)	256
EcoRII	CCWGG	2 cut(s)	535, 916
EcoT14I	CCWWGG	2 cut(s)	786, 923
EcoT38I	GRGCYC	1 cut(s)	136
ErhI	CCWWGG	2 cut(s)	786, 923
FaeI	CATG	2 cut(s)	556, 712
FalI	AAGNNNNNCTT	2 cut(s)	278, 310
FaqI	GGGAC	1 cut(s)	1044
FatI	CATG	2 cut(s)	552, 708
FauI	CCCGC	3 cut(s)	71, 299, 318
FblI	GTMKAC	2 cut(s)	171, 213
Fnu4HI	GCNGC	1 cut(s)	252
FokI	GGATG	1 cut(s)	607
FriOI	GRGCYC	1 cut(s)	136
Fsp4HI	GCNGC	1 cut(s)	252
FspBI	CTAG	1 cut(s)	321
GlaI	GCGC	2 cut(s)	461, 873
GluI	GCNGC	1 cut(s)	252
GsaI	CCCAGC	2 cut(s)	619, 722
HaeII	RGCGCY	1 cut(s)	875
HaeIII	GGCC	3 cut(s)	5, 768, 922
HapII	CCGG	2 cut(s)	201, 443
HgaI	GACGC	3 cut(s)	157, 193, 257
HhaI	GCGC	2 cut(s)	462, 874
Hin1I	GRCGYC	1 cut(s)	204
Hin1II	CATG	2 cut(s)	556, 712
Hin6I	GCGC	2 cut(s)	460, 872
HinP1I	GCGC	2 cut(s)	460, 872
HincII	GTYRAC	2 cut(s)	172, 714
HindII	GTYRAC	2 cut(s)	172, 714
HindIII	AAGCTT	1 cut(s)	177
HinfI	GANTC	2 cut(s)	159, 494
HpaII	CCGG	2 cut(s)	201, 443
HphI	GGTGA	3 cut(s)	515, 541, 1010
Hpy166II	GTNNAC	3 cut(s)	172, 214, 714
Hpy188I	TCNGA	4 cut(s)	131, 352, 472, 563
Hpy188III	TCNNGA	4 cut(s)	188, 275, 443, 737
Hpy8I	GTNNAC	3 cut(s)	172, 214, 714
Hpy99I	CGWCG	2 cut(s)	173, 209
HpyAV	CCTTC	5 cut(s)	16, 326, 602, 645, 1040
HpyCH4III	ACNGT	3 cut(s)	391, 862, 1017
HpyCH4V	TGCA	2 cut(s)	796, 980
HpyF10VI	GCNNNNNNNGC	6 cut(s)	291, 457, 774, 934, 968, 977
HpyF3I	CTNAG	1 cut(s)	471
Hsp92I	GRCGYC	1 cut(s)	204
Hsp92II	CATG	2 cut(s)	556, 712
HspAI	GCGC	2 cut(s)	460, 872
Kpn2I	TCCGGA	1 cut(s)	442
Kzo9I	GATC	2 cut(s)	505, 563
LmnI	GCTCC	2 cut(s)	41, 896
Lsp1109I	GCAGC	1 cut(s)	238
LweI	GCATC	2 cut(s)	355, 629
MaeI	CTAG	1 cut(s)	321
MaeIII	GTNAC	2 cut(s)	241, 547
MalI	GATC	2 cut(s)	507, 565
MboI	GATC	2 cut(s)	505, 563
MflI	RGATCY	1 cut(s)	563
MhlI	GDGCHC	1 cut(s)	136
MluCI	AATT	9 cut(s)	256, 655, 681, 701, 815, 886, 1061, 1118, 1138
MlyI	GAGTC	1 cut(s)	488
MmeI	TCCRAC	2 cut(s)	806, 1095
MnlI	CCTC	8 cut(s)	22, 60, 81, 127, 642, 1014, 1033, 1067
MroI	TCCGGA	1 cut(s)	442
MroXI	GAANNNNTTC	1 cut(s)	1065
MseI	TTAA	3 cut(s)	480, 654, 1035
MspI	CCGG	2 cut(s)	201, 443
MspR9I	CCNGG	2 cut(s)	537, 918
MvaI	CCWGG	2 cut(s)	537, 918
MvnI	CGCG	1 cut(s)	667
MwoI	GCNNNNNNNGC	6 cut(s)	291, 457, 774, 934, 968, 977
NdeII	GATC	2 cut(s)	505, 563
NlaIII	CATG	2 cut(s)	556, 712
NlaIV	GGNNCC	1 cut(s)	520
NmuCI	GTSAC	1 cut(s)	547
NspV	TTCGAA	2 cut(s)	594, 838
PasI	CCCWGGG	1 cut(s)	917
PdmI	GAANNNNTTC	1 cut(s)	1065
PfeI	GAWTC	1 cut(s)	159
PkrI	GCNGC	1 cut(s)	253
PleI	GAGTC	1 cut(s)	488
PpsI	GAGTC	1 cut(s)	488
PshAI	GACNNNNGTC	1 cut(s)	203
PshBI	ATTAAT	1 cut(s)	654
Psp124BI	GAGCTC	1 cut(s)	136
Psp6I	CCWGG	2 cut(s)	535, 916
PspFI	CCCAGC	2 cut(s)	615, 718
PspGI	CCWGG	2 cut(s)	535, 916
PspN4I	GGNNCC	1 cut(s)	520
PspPI	GGNCC	3 cut(s)	542, 766, 920
PsuI	RGATCY	1 cut(s)	563
RsaI	GTAC	1 cut(s)	851
RsaNI	GTAC	1 cut(s)	850
SacI	GAGCTC	1 cut(s)	136
SalI	GTCGAC	1 cut(s)	170
SaqAI	TTAA	3 cut(s)	480, 654, 1035
SatI	GCNGC	1 cut(s)	252
Sau3AI	GATC	2 cut(s)	505, 563
Sau96I	GGNCC	3 cut(s)	542, 766, 920
ScaI	AGTACT	1 cut(s)	851
SchI	GAGTC	1 cut(s)	488
ScrFI	CCNGG	2 cut(s)	537, 918
SduI	GDGCHC	1 cut(s)	136
SetI	ASST	9 cut(s)	119, 136, 181, 405, 490, 520, 613, 933, 1055
SfaNI	GCATC	2 cut(s)	355, 629
SfuI	TTCGAA	2 cut(s)	594, 838
SinI	GGWCC	1 cut(s)	542
Sse9I	AATT	9 cut(s)	256, 655, 681, 701, 815, 886, 1061, 1118, 1138
SsiI	CCGC	4 cut(s)	64, 99, 292, 311
SspMI	CTAG	1 cut(s)	321
SstI	GAGCTC	1 cut(s)	136
StyD4I	CCNGG	2 cut(s)	535, 916
StyI	CCWWGG	2 cut(s)	786, 923
TaaI	ACNGT	3 cut(s)	391, 862, 1017
TaqI	TCGA	7 cut(s)	171, 497, 594, 738, 802, 838, 854
TasI	AATT	9 cut(s)	256, 655, 681, 701, 815, 886, 1061, 1118, 1138
TatI	WGTACW	1 cut(s)	849
TfiI	GAWTC	1 cut(s)	159
Tru1I	TTAA	3 cut(s)	480, 654, 1035
Tru9I	TTAA	3 cut(s)	480, 654, 1035
TscAI	CASTG	1 cut(s)	831
TseFI	GTSAC	1 cut(s)	547
TseI	GCWGC	1 cut(s)	251
Tsp45I	GTSAC	1 cut(s)	547
TspDTI	ATGAA	6 cut(s)	246, 349, 437, 615, 621, 640
TspRI	CASTG	1 cut(s)	831
VpaK11BI	GGWCC	1 cut(s)	542
VspI	ATTAAT	1 cut(s)	654
XapI	RAATTY	2 cut(s)	256, 1061
XmiI	GTMKAC	2 cut(s)	171, 213
XmnI	GAANNNNTTC	1 cut(s)	1065
XspI	CTAG	1 cut(s)	321
ZrmI	AGTACT	1 cut(s)	851

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.