Rmu_sc0003381.1_g000006

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003381.1
OG0000187
Physical Location & Seq
Forward (+)
16192 .. 17976
1785 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003381.1_g000006.1.cds

Sequence Viewer

Length: 1248 bp
atgactcggcgctacatagtgaggctgaaacatgtagagttgggttgctcttggccattcatcaaggttggaaagagattgagagtgactcctctatcttggaagttgtgcttaatcaacaggttgagaacaactcgatctgagggtaagggtttgcgacaggcaaacgtattcttggtgggcaagctcctcaccgctctggatttcaaggtcaggtctttcatggggatgtttcgcaacgcctggaggggtaagggtttgcgacaggcaaacgtattcttggtgggcaagctcctcaccgctctggatttcaaggtcaggtctttcatggggatgtttcgcaacgcctggagggggtataatcacgcgcctgtggctctagctttatatgatggtatcatgccggtggagaaagtgcccctagccatggcatcatattggataactcttcagggaatactaccagcgtttcggtctgaacgtgtcatgaccatgatcggctacacgctgggggattttcaggaaattgataagaatgctaagaagactgggaaactccggattagggttgagatacctttgaataaaccattgcctttcaagcagtggtacttggtggaagatgcggtcgagtttcactgtcaattccgttatgacaagcttttcggaagatgctatgtatgtggattagtcacacatgtgggtttgccatgctccggatcggcgctggatgaagacgatgatgaagccgagagaattgttttggggtcccagaccacggtgtcagagatgaacggtggcggctcgccgggagtttgggcggggtcaacattggggcatgctagtggtagtgggctcactacaggtgtaagagctagggttaccaccccgtgtccacagttggggacagcggaaactccagaacgtatcactggcaagagtcgaaacagagacgacagcctgactatcacccctaagaaactgaaattgagtttggcggtaggtaagagcaatctcattcttgattctaaaaagcttggcctggaccctatacaggaggagactcattctgggagtatgaagtggaagcgaggacgactttctggcagtagaaataagtcgtcgtctagtggcaagcagcagacctcaaagcatggtgagggtaaggagaagaataagtctccaacaatgaagcagtctgtggggaaacactccaacccgaaagggaaggagttggctcttttttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

415

Amino Acids

46.16

Weight (kDa)

10.14

Isoelectric Point (pI)

32.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Style Settings
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000187)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20170 FvH4_4g06831
rosa_chinensis RchiOBHm_Chr1g0321991 RchiOBHm_Chr2g0161811
rosa_laevigata RLG00000015375 RLG00000018377
rosa_multiflora Rmu_co8011754.1_g000001 Rmu_co8019986.1_g000001 Rmu_co8067766.1_g000001 Rmu_co8156128.1_g000001 Rmu_co8219154.1_g000003 Rmu_co8297235.1_g000001 Rmu_co8345223.1_g000001 Rmu_co8364775.1_g000001 Rmu_co8465075.1_g000001 Rmu_sc0000007.1_g000002 Rmu_sc0000054.1_g000015 Rmu_sc0000054.1_g000023 Rmu_sc0000145.1_g000010 Rmu_sc0000166.1_g000006 Rmu_sc0000218.1_g000012 Rmu_sc0000339.1_g000008 Rmu_sc0000342.1_g000015 Rmu_sc0000464.1_g000008 Rmu_sc0000620.1_g000003 Rmu_sc0000638.1_g000017 Rmu_sc0000890.1_g000007 Rmu_sc0000894.1_g000024 Rmu_sc0000909.1_g000010 Rmu_sc0000928.1_g000020 Rmu_sc0000977.1_g000007 Rmu_sc0001022.1_g000003 Rmu_sc0001035.1_g000037 Rmu_sc0001060.1_g000008 Rmu_sc0001168.1_g000005 Rmu_sc0001173.1_g000022 Rmu_sc0001179.1_g000016 Rmu_sc0001408.1_g000003 Rmu_sc0001455.1_g000005 Rmu_sc0001484.1_g000008 Rmu_sc0001585.1_g000010 Rmu_sc0001702.1_g000030 Rmu_sc0001755.1_g000063 Rmu_sc0001903.1_g000009 Rmu_sc0002099.1_g000001 Rmu_sc0002142.1_g000012 Rmu_sc0002158.1_g000014 Rmu_sc0002307.1_g000009 Rmu_sc0002358.1_g000013 Rmu_sc0002421.1_g000002 Rmu_sc0002426.1_g000003 Rmu_sc0002438.1_g000001 Rmu_sc0002461.1_g000001 Rmu_sc0002508.1_g000003 Rmu_sc0002532.1_g000056 Rmu_sc0002583.1_g000002 Rmu_sc0002927.1_g000033 Rmu_sc0003033.1_g000040 Rmu_sc0003271.1_g000006 Rmu_sc0003381.1_g000006 Rmu_sc0003507.1_g000007 Rmu_sc0003578.1_g000003 Rmu_sc0003693.1_g000004 Rmu_sc0003693.1_g000005 Rmu_sc0003704.1_g000003 Rmu_sc0003840.1_g000002 Rmu_sc0004084.1_g000026 Rmu_sc0004193.1_g000007 Rmu_sc0004234.1_g000033 Rmu_sc0004235.1_g000025 Rmu_sc0004435.1_g000006 Rmu_sc0004727.1_g000003 Rmu_sc0004741.1_g000001 Rmu_sc0004926.1_g000004 Rmu_sc0005365.1_g000001 Rmu_sc0005392.1_g000007 Rmu_sc0005415.1_g000001 Rmu_sc0005539.1_g000007 Rmu_sc0005708.1_g000017 Rmu_sc0006317.1_g000007 Rmu_sc0006453.1_g000054 Rmu_sc0006536.1_g000004 Rmu_sc0006740.1_g000022 Rmu_sc0006763.1_g000012 Rmu_sc0007115.1_g000002 Rmu_sc0007115.1_g000010 Rmu_sc0007129.1_g000017 Rmu_sc0007131.1_g000010 Rmu_sc0008373.1_g000008 Rmu_sc0009005.1_g000008 Rmu_sc0009252.1_g000007 Rmu_sc0009599.1_g000022 Rmu_sc0009785.1_g000027 Rmu_sc0009891.1_g000003 Rmu_sc0010099.1_g000010 Rmu_sc0010266.1_g000008 Rmu_sc0010334.1_g000003 Rmu_sc0010381.1_g000001 Rmu_sc0010496.1_g000003 Rmu_sc0010496.1_g000004 Rmu_sc0010546.1_g000003 Rmu_sc0011482.1_g000006 Rmu_sc0011875.1_g000010 Rmu_sc0011917.1_g000006 Rmu_sc0012293.1_g000004 Rmu_sc0012847.1_g000003 Rmu_sc0013773.1_g000001 Rmu_sc0016060.1_g000003 Rmu_sc0016170.1_g000013 Rmu_sc0016393.1_g000002 Rmu_sc0017589.1_g000001 Rmu_sc0017786.1_g000005 Rmu_sc0018326.1_g000002 Rmu_sc0020760.1_g000001 Rmu_sc0021262.1_g000003 Rmu_sc0023851.1_g000002 Rmu_sc0024044.1_g000001 Rmu_sc0026820.1_g000001 Rmu_sc0032306.1_g000001 Rmu_sc0035666.1_g000001 Rmu_sc0036881.1_g000001 Rmu_sc0037030.1_g000001 Rmu_sc0037158.1_g000001 Rmu_ssc0000016.1_g000002 Rmu_ssc0000044.1_g000012 Rmu_ssc0000044.1_g000014 Rmu_ssc0000050.1_g000064 Rmu_ssc0000064.1_g000022 Rmu_ssc0000154.1_g000037 Rmu_ssc0000178.1_g000013 Rmu_ssc0000217.1_g000022 Rmu_ssc0000392.1_g000004
rosa_roxburghii Rroxscaffold_3G00242000 Rroxscaffold_3G00242530 Rroxscaffold_6G00406010
rosa_rugosa Rorug01G0062000 Rorug02G0224000 Rorug02G0262900 Rorug02G0263000 Rorug02G0358900 Rorug02G0360500 Rorug02G0378500.1 Rorug02G0378600 Rorug02G0394700 Rorug03G0122900 Rorug03G0254600 Rorug03G0254700 Rorug03G0254800 Rorug04G0042200.1 Rorug04G0378100 Rorug05G0053400 Rorug05G0238600 Rorug05G0364500 Rorug05G0562000 Rorug06G0089300 Rorug06G0089400 Rorug06G0145700 Rorug07G0111600 Rorug07G0229500.1 Rorug07G0287600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 781
AccBSI CCGCTC 2 cut(s) 197, 302
AccII CGCG 1 cut(s) 368
AccIII TCCGGA 2 cut(s) 558, 716
AciI CCGC 7 cut(s) 195, 300, 626, 801, 821, 911, 998
AclWI GGATC 1 cut(s) 727
AcoI YGGCCR 1 cut(s) 53
AcuI CTGAAG 1 cut(s) 434
AdeI CACNNNGTG 1 cut(s) 891
AfaI GTAC 1 cut(s) 611
AfiI CCNNNNNNNGG 7 cut(s) 354, 427, 565, 716, 778, 902, 1054
AflIII ACRYGT 3 cut(s) 31, 481, 697
AgsI TTSAA 4 cut(s) 208, 313, 583, 601
AjnI CCWGG 3 cut(s) 242, 347, 1041
AjuI GAANNNNNNNTTGG 2 cut(s) 977, 1009
AleI CACNNNNGTG 1 cut(s) 698
AluBI AGCT 6 cut(s) 187, 292, 383, 661, 875, 1036
AluI AGCT 6 cut(s) 187, 292, 383, 661, 875, 1036
Alw26I GTCTC 3 cut(s) 945, 1055, 1185
AlwI GGATC 1 cut(s) 727
Aor13HI TCCGGA 2 cut(s) 558, 716
AoxI GGCC 2 cut(s) 53, 1039
ApeKI GCWGC 1 cut(s) 1138
ArsI GACNNNNNNTTYG 2 cut(s) 647, 679
AspLEI GCGC 3 cut(s) 12, 370, 727
AspS9I GGNCC 2 cut(s) 768, 1045
AsuC2I CCSGG 1 cut(s) 810
AsuHPI GGTGA 4 cut(s) 184, 289, 961, 1169
AvaII GGWCC 2 cut(s) 768, 1045
BaeGI GKGCMC 1 cut(s) 420
BalI TGGCCA 1 cut(s) 55
BanII GRGCYC 1 cut(s) 858
BbsI GAAGAC 2 cut(s) 551, 741
BbvI GCAGC 1 cut(s) 1150
BccI CCATC 1 cut(s) 386
BciT130I CCWGG 3 cut(s) 244, 349, 1043
BcnI CCSGG 1 cut(s) 810
BcoDI GTCTC 3 cut(s) 945, 1055, 1185
BfaI CTAG 5 cut(s) 380, 422, 843, 876, 1128
BfmI CTRYAG 1 cut(s) 861
BfoI RGCGCY 2 cut(s) 13, 728
BisI GCNGC 2 cut(s) 802, 1139
BlsI GCNGC 2 cut(s) 803, 1140
Bme1390I CCNGG 4 cut(s) 244, 349, 810, 1043
Bme18I GGWCC 2 cut(s) 768, 1045
BmgT120I GGNCC 2 cut(s) 768, 1045
BmiI GGNNCC 3 cut(s) 769, 770, 1047
BmrFI CCNGG 4 cut(s) 244, 349, 810, 1043
BmrI ACTGGG 1 cut(s) 558
BmsI GCATC 3 cut(s) 440, 613, 662
BmuI ACTGGG 1 cut(s) 558
BpiI GAAGAC 2 cut(s) 551, 741
BplI GAGNNNNNCTC 4 cut(s) 73, 105, 118, 150
BpmI CTGGAG 3 cut(s) 265, 370, 903
BpuMI CCSGG 1 cut(s) 810
BsaJI CCNNGG 2 cut(s) 426, 777
BsaWI WCCGGW 2 cut(s) 558, 716
Bsc4I CCNNNNNNNGG 7 cut(s) 354, 427, 565, 716, 778, 902, 1054
Bse118I RCCGGY 1 cut(s) 403
Bse1I ACTGG 2 cut(s) 553, 937
Bse3DI GCAATG 1 cut(s) 590
BseAI TCCGGA 2 cut(s) 558, 716
BseBI CCWGG 3 cut(s) 244, 349, 1043
BseDI CCNNGG 2 cut(s) 426, 777
BseGI GGATG 3 cut(s) 234, 339, 736
BseLI CCNNNNNNNGG 7 cut(s) 354, 427, 565, 716, 778, 902, 1054
BseMI GCAATG 1 cut(s) 590
BseMII CTCAG 1 cut(s) 132
BseNI ACTGG 2 cut(s) 553, 937
BseRI GAGGAG 4 cut(s) 81, 179, 284, 1073
BseSI GKGCMC 1 cut(s) 420
BseXI GCAGC 1 cut(s) 1150
BseYI CCCAGC 1 cut(s) 508
Bsh1236I CGCG 1 cut(s) 368
Bsh1285I CGRYCG 1 cut(s) 630
BshFI GGCC 2 cut(s) 55, 1041
BsiEI CGRYCG 1 cut(s) 630
BsiSI CCGG 4 cut(s) 404, 559, 717, 809
BslFI GGGAC 2 cut(s) 754, 919
BslI CCNNNNNNNGG 7 cut(s) 354, 427, 565, 716, 778, 902, 1054
BsmAI GTCTC 3 cut(s) 945, 1055, 1185
BsmBI CGTCTC 1 cut(s) 945
BsmFI GGGAC 2 cut(s) 754, 919
BsmI GAATGC 1 cut(s) 541
BsnI GGCC 2 cut(s) 55, 1041
Bsp1286I GDGCHC 2 cut(s) 420, 858
Bsp13I TCCGGA 2 cut(s) 558, 716
Bsp143I GATC 3 cut(s) 137, 495, 719
Bsp19I CCATGG 1 cut(s) 426
BspACI CCGC 7 cut(s) 195, 300, 626, 801, 821, 911, 998
BspANI GGCC 2 cut(s) 55, 1041
BspCNI CTCAG 1 cut(s) 133
BspEI TCCGGA 2 cut(s) 558, 716
BspFNI CGCG 1 cut(s) 368
BspHI TCATGA 1 cut(s) 486
BspLI GGNNCC 3 cut(s) 769, 770, 1047
BspPI GGATC 1 cut(s) 727
BsrBI CCGCTC 2 cut(s) 197, 302
BsrDI GCAATG 1 cut(s) 590
BsrFI RCCGGY 1 cut(s) 403
BsrI ACTGG 2 cut(s) 553, 937
BssAI RCCGGY 1 cut(s) 403
BssECI CCNNGG 2 cut(s) 426, 777
BssMI GATC 3 cut(s) 137, 495, 719
BssT1I CCWWGG 1 cut(s) 426
Bst2UI CCWGG 3 cut(s) 244, 349, 1043
Bst4CI ACNGT 4 cut(s) 641, 781, 797, 900
Bst6I CTCTTC 1 cut(s) 453
BstC8I GCNNGC 5 cut(s) 185, 290, 806, 840, 1136
BstDEI CTNAG 3 cut(s) 141, 540, 975
BstDSI CCRYGG 2 cut(s) 426, 777
BstEII GGTNACC 1 cut(s) 880
BstF5I GGATG 3 cut(s) 234, 339, 736
BstFNI CGCG 1 cut(s) 368
BstH2I RGCGCY 2 cut(s) 13, 728
BstHHI GCGC 3 cut(s) 12, 370, 727
BstKTI GATC 3 cut(s) 140, 498, 722
BstMAI GTCTC 3 cut(s) 945, 1055, 1185
BstMBI GATC 3 cut(s) 137, 495, 719
BstMCI CGRYCG 1 cut(s) 630
BstMWI GCNNNNNNNGC 2 cut(s) 374, 601
BstNI CCWGG 3 cut(s) 244, 349, 1043
BstNSI RCATGY 3 cut(s) 35, 701, 842
BstPI GGTNACC 1 cut(s) 880
BstSCI CCNGG 4 cut(s) 242, 347, 808, 1041
BstSFI CTRYAG 1 cut(s) 861
BstSLI GKGCMC 1 cut(s) 420
BstUI CGCG 1 cut(s) 368
BstV1I GCAGC 1 cut(s) 1150
BstV2I GAAGAC 2 cut(s) 551, 741
BsuRI GGCC 2 cut(s) 55, 1041
BtgI CCRYGG 2 cut(s) 426, 777
BtsCI GGATG 3 cut(s) 234, 339, 736
BtsI GCAGTG 1 cut(s) 611
BtsIMutI CAGTG 3 cut(s) 611, 637, 930
Cac8I GCNNGC 5 cut(s) 185, 290, 806, 840, 1136
CciI TCATGA 1 cut(s) 486
CfoI GCGC 3 cut(s) 12, 370, 727
Cfr10I RCCGGY 1 cut(s) 403
Cfr13I GGNCC 2 cut(s) 768, 1045
Csp6I GTAC 1 cut(s) 610
CviQI GTAC 1 cut(s) 610
DdeI CTNAG 3 cut(s) 141, 540, 975
DpnI GATC 3 cut(s) 139, 497, 721
DpnII GATC 3 cut(s) 137, 495, 719
DraIII CACNNNGTG 1 cut(s) 891
DrdI GACNNNNNNGTC 1 cut(s) 781
DseDI GACNNNNNNGTC 1 cut(s) 781
EaeI YGGCCR 1 cut(s) 53
Eam1104I CTCTTC 1 cut(s) 453
EarI CTCTTC 1 cut(s) 453
Eco130I CCWWGG 1 cut(s) 426
Eco24I GRGCYC 1 cut(s) 858
Eco47I GGWCC 2 cut(s) 768, 1045
Eco57I CTGAAG 1 cut(s) 434
Eco91I GGTNACC 1 cut(s) 880
EcoO109I RGGNCCY 1 cut(s) 768
EcoO65I GGTNACC 1 cut(s) 880
EcoRII CCWGG 3 cut(s) 242, 347, 1041
EcoT14I CCWWGG 1 cut(s) 426
EcoT38I GRGCYC 1 cut(s) 858
ErhI CCWWGG 1 cut(s) 426
Esp3I CGTCTC 1 cut(s) 945
FalI AAGNNNNNCTT 2 cut(s) 95, 127
FaqI GGGAC 2 cut(s) 754, 919
FauI CCCGC 1 cut(s) 814
Fnu4HI GCNGC 2 cut(s) 802, 1139
FokI GGATG 3 cut(s) 241, 346, 743
FriOI GRGCYC 1 cut(s) 858
Fsp4HI GCNGC 2 cut(s) 802, 1139
FspBI CTAG 5 cut(s) 380, 422, 843, 876, 1128
GlaI GCGC 3 cut(s) 11, 369, 726
GluI GCNGC 2 cut(s) 802, 1139
GsaI CCCAGC 1 cut(s) 512
GsuI CTGGAG 3 cut(s) 265, 370, 903
HaeII RGCGCY 2 cut(s) 13, 728
HaeIII GGCC 2 cut(s) 55, 1041
HapII CCGG 4 cut(s) 404, 559, 717, 809
HhaI GCGC 3 cut(s) 12, 370, 727
Hin6I GCGC 3 cut(s) 10, 368, 725
HinP1I GCGC 3 cut(s) 10, 368, 725
HincII GTYRAC 1 cut(s) 828
HindII GTYRAC 1 cut(s) 828
HindIII AAGCTT 2 cut(s) 659, 1034
HinfI GANTC 5 cut(s) 4, 88, 940, 1025, 1063
HpaII CCGG 4 cut(s) 404, 559, 717, 809
HphI GGTGA 4 cut(s) 184, 289, 961, 1169
Hpy166II GTNNAC 2 cut(s) 828, 896
Hpy188I TCNGA 4 cut(s) 142, 478, 668, 787
Hpy188III TCNNGA 8 cut(s) 200, 305, 487, 521, 559, 717, 920, 1022
Hpy8I GTNNAC 2 cut(s) 828, 896
Hpy99I CGWCG 1 cut(s) 1126
HpyAV CCTTC 1 cut(s) 1222
HpyCH4III ACNGT 4 cut(s) 641, 781, 797, 900
HpyCH4IV ACGT 4 cut(s) 168, 273, 481, 925
HpyF10VI GCNNNNNNNGC 2 cut(s) 374, 601
HpyF3I CTNAG 3 cut(s) 141, 540, 975
HpySE526I ACGT 4 cut(s) 168, 273, 481, 925
HspAI GCGC 3 cut(s) 10, 368, 725
KflI GGGWCCC 1 cut(s) 768
Kpn2I TCCGGA 2 cut(s) 558, 716
Kzo9I GATC 3 cut(s) 137, 495, 719
LmnI GCTCC 3 cut(s) 192, 297, 719
Lsp1109I GCAGC 1 cut(s) 1150
LweI GCATC 3 cut(s) 440, 613, 662
MaeI CTAG 5 cut(s) 380, 422, 843, 876, 1128
MaeII ACGT 4 cut(s) 168, 273, 481, 925
MaeIII GTNAC 3 cut(s) 85, 691, 880
MalI GATC 3 cut(s) 139, 497, 721
MbiI CCGCTC 2 cut(s) 197, 302
MboI GATC 3 cut(s) 137, 495, 719
MboII GAAGA 6 cut(s) 440, 556, 632, 681, 746, 1183
MhlI GDGCHC 2 cut(s) 420, 858
MlsI TGGCCA 1 cut(s) 55
MluCI AATT 4 cut(s) 525, 644, 756, 986
MluNI TGGCCA 1 cut(s) 55
MlyI GAGTC 3 cut(s) 82, 949, 1057
MmeI TCCRAC 3 cut(s) 49, 1208, 1239
Mox20I TGGCCA 1 cut(s) 55
MroI TCCGGA 2 cut(s) 558, 716
MscI TGGCCA 1 cut(s) 55
MseI TTAA 1 cut(s) 113
MslI CAYNNNNRTG 6 cut(s) 227, 332, 404, 491, 698, 843
Msp20I TGGCCA 1 cut(s) 55
MspA1I CMGCKG 1 cut(s) 911
MspI CCGG 4 cut(s) 404, 559, 717, 809
MspR9I CCNGG 4 cut(s) 244, 349, 810, 1043
Mva1269I GAATGC 1 cut(s) 541
MvaI CCWGG 3 cut(s) 244, 349, 1043
MvnI CGCG 1 cut(s) 368
MwoI GCNNNNNNNGC 2 cut(s) 374, 601
NciI CCSGG 1 cut(s) 810
NcoI CCATGG 1 cut(s) 426
NdeII GATC 3 cut(s) 137, 495, 719
NlaIV GGNNCC 3 cut(s) 769, 770, 1047
NmeAIII GCCGAG 1 cut(s) 775
NmuCI GTSAC 2 cut(s) 85, 691
NspI RCATGY 3 cut(s) 35, 701, 842
OliI CACNNNNGTG 1 cut(s) 698
PaeI GCATGC 1 cut(s) 842
PagI TCATGA 1 cut(s) 486
PciI ACATGT 2 cut(s) 31, 697
PcsI WCGNNNNNNNCGW 1 cut(s) 478
PctI GAATGC 1 cut(s) 541
PfeI GAWTC 1 cut(s) 1025
PkrI GCNGC 2 cut(s) 803, 1140
PleI GAGTC 3 cut(s) 82, 948, 1057
PpsI GAGTC 3 cut(s) 82, 948, 1057
PpuMI RGGWCCY 1 cut(s) 768
PscI ACATGT 2 cut(s) 31, 697
Psp5II RGGWCCY 1 cut(s) 768
Psp6I CCWGG 3 cut(s) 242, 347, 1041
PspEI GGTNACC 1 cut(s) 880
PspFI CCCAGC 1 cut(s) 508
PspGI CCWGG 3 cut(s) 242, 347, 1041
PspN4I GGNNCC 3 cut(s) 769, 770, 1047
PspPI GGNCC 2 cut(s) 768, 1045
PspPPI RGGWCCY 1 cut(s) 768
RsaI GTAC 1 cut(s) 611
RsaNI GTAC 1 cut(s) 610
RseI CAYNNNNRTG 6 cut(s) 227, 332, 404, 491, 698, 843
SaqAI TTAA 1 cut(s) 113
SatI GCNGC 2 cut(s) 802, 1139
Sau3AI GATC 3 cut(s) 137, 495, 719
Sau96I GGNCC 2 cut(s) 768, 1045
SchI GAGTC 3 cut(s) 82, 949, 1057
ScrFI CCNGG 4 cut(s) 244, 349, 810, 1043
SduI GDGCHC 2 cut(s) 420, 858
SfaNI GCATC 3 cut(s) 440, 613, 662
SfcI CTRYAG 1 cut(s) 861
SinI GGWCC 2 cut(s) 768, 1045
SmiMI CAYNNNNRTG 6 cut(s) 227, 332, 404, 491, 698, 843
SphI GCATGC 1 cut(s) 842
Sse9I AATT 4 cut(s) 525, 644, 756, 986
SsiI CCGC 7 cut(s) 195, 300, 626, 801, 821, 911, 998
SspMI CTAG 5 cut(s) 380, 422, 843, 876, 1128
StyD4I CCNGG 4 cut(s) 242, 347, 808, 1041
StyI CCWWGG 1 cut(s) 426
TaaI ACNGT 4 cut(s) 641, 781, 797, 900
TaiI ACGT 4 cut(s) 171, 276, 484, 928
TaqI TCGA 3 cut(s) 136, 630, 943
TaqII GACCGA 1 cut(s) 462
TasI AATT 4 cut(s) 525, 644, 756, 986
TauI GCSGC 1 cut(s) 804
TfiI GAWTC 1 cut(s) 1025
Tru1I TTAA 1 cut(s) 113
Tru9I TTAA 1 cut(s) 113
TscAI CASTG 3 cut(s) 611, 644, 937
TseFI GTSAC 2 cut(s) 85, 691
TseI GCWGC 1 cut(s) 1138
Tsp45I GTSAC 2 cut(s) 85, 691
TspDTI ATGAA 8 cut(s) 49, 211, 316, 747, 759, 806, 1094, 1205
TspGWI ACGGA 1 cut(s) 638
TspRI CASTG 3 cut(s) 611, 644, 937
VpaK11BI GGWCC 2 cut(s) 768, 1045
XceI RCATGY 3 cut(s) 35, 701, 842
XspI CTAG 5 cut(s) 380, 422, 843, 876, 1128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.