ethylene-responsive transcription factor
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 59 - 205 | 2.1e-16 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 275 - 345 | 4.6e-12 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 545 - 681 | 7.1e-12 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 554 - 638 | 6.2e-14 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 688 - 793 | 1.6e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 696 - 781 | 2.9e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 848 - 923 | 2.3e-06 | Leucine-rich repeat region |
| NB-ARC | PF00931 | 961 - 1092 | 5.1e-14 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 1189 - 1259 | 2.5e-11 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_3 | PF07725 | 1364 - 1383 | 1.5e-06 | Leucine Rich Repeat |
| LRR_14 | PF23598 | 1447 - 1553 | 5e-11 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 1455 - 1542 | 1.5e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 285, 509, 2519 |
| AatII | GACGTC | 1 cut(s) | 2567 |
| Acc36I | ACCTGC | 1 cut(s) | 1555 |
| Acc65I | GGTACC | 1 cut(s) | 3815 |
| AccB1I | GGYRCC | 2 cut(s) | 1344, 3815 |
| AccI | GTMKAC | 5 cut(s) | 549, 1392, 2006, 3906, 4098 |
| AccII | CGCG | 1 cut(s) | 4691 |
| AccIII | TCCGGA | 2 cut(s) | 2509, 4558 |
| AciI | CCGC | 5 cut(s) | 915, 1414, 1733, 3799, 4689 |
| AclWI | GGATC | 2 cut(s) | 2844, 3236 |
| AcoI | YGGCCR | 1 cut(s) | 4350 |
| AcuI | CTGAAG | 8 cut(s) | 592, 1995, 2621, 3355, 3360, 3895, 4175, 4490 |
| AcyI | GRCGYC | 2 cut(s) | 1499, 2564 |
| AdeI | CACNNNGTG | 2 cut(s) | 653, 3416 |
| AfaI | GTAC | 9 cut(s) | 635, 789, 822, 1130, 1552, 2306, 3817, 4160, 4258 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 3392, 3393, 4743 |
| AflII | CTTAAG | 8 cut(s) | 373, 1490, 1589, 1631, 2129, 2270, 4337, 4373 |
| AflIII | ACRYGT | 1 cut(s) | 3991 |
| AjnI | CCWGG | 1 cut(s) | 3819 |
| Alw21I | GWGCWC | 6 cut(s) | 163, 270, 949, 2708, 4278, 4613 |
| Alw44I | GTGCAC | 1 cut(s) | 4274 |
| AlwI | GGATC | 2 cut(s) | 2844, 3236 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2664, 4569 |
| Ama87I | CYCGRG | 4 cut(s) | 669, 1700, 3388, 4418 |
| Aor13HI | TCCGGA | 2 cut(s) | 2509, 4558 |
| AoxI | GGCC | 5 cut(s) | 526, 1515, 3553, 3649, 4350 |
| ApaLI | GTGCAC | 1 cut(s) | 4274 |
| AseI | ATTAAT | 4 cut(s) | 1269, 3581, 3978, 4173 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 32, 336, 3048 |
| Asp718I | GGTACC | 1 cut(s) | 3815 |
| AspLEI | GCGC | 1 cut(s) | 4541 |
| AspS9I | GGNCC | 2 cut(s) | 526, 2758 |
| AsuC2I | CCSGG | 1 cut(s) | 4738 |
| AsuHPI | GGTGA | 5 cut(s) | 184, 326, 1562, 1804, 4073 |
| AsuII | TTCGAA | 2 cut(s) | 2336, 2492 |
| AsuNHI | GCTAGC | 1 cut(s) | 4541 |
| AvaI | CYCGRG | 4 cut(s) | 669, 1700, 3388, 4418 |
| AvaII | GGWCC | 1 cut(s) | 2758 |
| BaeGI | GKGCMC | 2 cut(s) | 1349, 4278 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2288, 2321 |
| BanI | GGYRCC | 2 cut(s) | 1344, 3815 |
| BanII | GRGCYC | 1 cut(s) | 949 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2532, 2564 |
| BbsI | GAAGAC | 4 cut(s) | 224, 2270, 3204, 4496 |
| Bbv12I | GWGCWC | 6 cut(s) | 163, 270, 949, 2708, 4278, 4613 |
| BceAI | ACGGC | 3 cut(s) | 1760, 1987, 3985 |
| BciT130I | CCWGG | 1 cut(s) | 3821 |
| BciVI | GTATCC | 2 cut(s) | 959, 1087 |
| BclI | TGATCA | 1 cut(s) | 448 |
| BcnI | CCSGG | 1 cut(s) | 4738 |
| BfmI | CTRYAG | 2 cut(s) | 2943, 3661 |
| BfrI | CTTAAG | 8 cut(s) | 373, 1490, 1589, 1631, 2129, 2270, 4337, 4373 |
| BfuAI | ACCTGC | 1 cut(s) | 1555 |
| BfuI | GTATCC | 2 cut(s) | 959, 1087 |
| BglII | AGATCT | 2 cut(s) | 3445, 3689 |
| BmcAI | AGTACT | 1 cut(s) | 4160 |
| Bme1390I | CCNGG | 2 cut(s) | 3821, 4738 |
| Bme18I | GGWCC | 1 cut(s) | 2758 |
| BmeT110I | CYCGRG | 4 cut(s) | 669, 1700, 3388, 4418 |
| BmgT120I | GGNCC | 2 cut(s) | 526, 2758 |
| BmiI | GGNNCC | 7 cut(s) | 703, 1346, 1438, 3106, 3817, 3973, 4144 |
| BmrFI | CCNGG | 2 cut(s) | 3821, 4738 |
| BmsI | GCATC | 8 cut(s) | 448, 975, 1393, 1425, 3027, 3490, 4365, 4575 |
| BmtI | GCTAGC | 1 cut(s) | 4545 |
| BpiI | GAAGAC | 4 cut(s) | 224, 2270, 3204, 4496 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 693, 725 |
| BpmI | CTGGAG | 1 cut(s) | 914 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2162, 2877 |
| Bpu14I | TTCGAA | 2 cut(s) | 2336, 2492 |
| BpuMI | CCSGG | 1 cut(s) | 4738 |
| BsaHI | GRCGYC | 2 cut(s) | 1499, 2564 |
| BsaI | GGTCTC | 2 cut(s) | 1664, 2693 |
| BsaJI | CCNNGG | 3 cut(s) | 1512, 1742, 3819 |
| BsaWI | WCCGGW | 2 cut(s) | 2509, 4558 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1289, 1319 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 3392, 3393, 4743 |
| Bse118I | RCCGGY | 1 cut(s) | 556 |
| Bse1I | ACTGG | 2 cut(s) | 929, 967 |
| Bse3DI | GCAATG | 2 cut(s) | 271, 2937 |
| BseAI | TCCGGA | 2 cut(s) | 2509, 4558 |
| BseBI | CCWGG | 1 cut(s) | 3821 |
| BseDI | CCNNGG | 3 cut(s) | 1512, 1742, 3819 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 3392, 3393, 4743 |
| BseMI | GCAATG | 2 cut(s) | 271, 2937 |
| BseNI | ACTGG | 2 cut(s) | 929, 967 |
| BseRI | GAGGAG | 2 cut(s) | 1085, 2958 |
| BseSI | GKGCMC | 2 cut(s) | 1349, 4278 |
| BseYI | CCCAGC | 4 cut(s) | 2438, 2529, 3285, 3324 |
| BsgI | GTGCAG | 4 cut(s) | 3048, 3098, 3623, 3936 |
| Bsh1236I | CGCG | 1 cut(s) | 4691 |
| BshFI | GGCC | 5 cut(s) | 528, 1517, 3555, 3651, 4352 |
| BshNI | GGYRCC | 2 cut(s) | 1344, 3815 |
| BsiHKAI | GWGCWC | 6 cut(s) | 163, 270, 949, 2708, 4278, 4613 |
| BsiHKCI | CYCGRG | 4 cut(s) | 669, 1700, 3388, 4418 |
| BsiSI | CCGG | 5 cut(s) | 557, 2510, 4349, 4559, 4737 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 3392, 3393, 4743 |
| BsmBI | CGTCTC | 1 cut(s) | 1490 |
| BsmI | GAATGC | 4 cut(s) | 330, 626, 2054, 2079 |
| BsnI | GGCC | 5 cut(s) | 528, 1517, 3555, 3651, 4352 |
| Bso31I | GGTCTC | 2 cut(s) | 1664, 2693 |
| BsoBI | CYCGRG | 4 cut(s) | 669, 1700, 3388, 4418 |
| Bsp119I | TTCGAA | 2 cut(s) | 2336, 2492 |
| Bsp1286I | GDGCHC | 7 cut(s) | 163, 270, 949, 1349, 2708, 4278, 4613 |
| Bsp13I | TCCGGA | 2 cut(s) | 2509, 4558 |
| Bsp1407I | TGTACA | 3 cut(s) | 820, 1550, 4256 |
| BspACI | CCGC | 5 cut(s) | 915, 1414, 1733, 3799, 4689 |
| BspANI | GGCC | 5 cut(s) | 528, 1517, 3555, 3651, 4352 |
| BspEI | TCCGGA | 2 cut(s) | 2509, 4558 |
| BspFNI | CGCG | 1 cut(s) | 4691 |
| BspHI | TCATGA | 3 cut(s) | 1315, 3733, 4021 |
| BspLI | GGNNCC | 7 cut(s) | 703, 1346, 1438, 3106, 3817, 3973, 4144 |
| BspMI | ACCTGC | 1 cut(s) | 1555 |
| BspOI | GCTAGC | 1 cut(s) | 4545 |
| BspPI | GGATC | 2 cut(s) | 2844, 3236 |
| BspT104I | TTCGAA | 2 cut(s) | 2336, 2492 |
| BspT107I | GGYRCC | 2 cut(s) | 1344, 3815 |
| BspTI | CTTAAG | 8 cut(s) | 373, 1490, 1589, 1631, 2129, 2270, 4337, 4373 |
| BspTNI | GGTCTC | 2 cut(s) | 1664, 2693 |
| BsrDI | GCAATG | 2 cut(s) | 271, 2937 |
| BsrFI | RCCGGY | 1 cut(s) | 556 |
| BsrGI | TGTACA | 3 cut(s) | 820, 1550, 4256 |
| BsrI | ACTGG | 2 cut(s) | 929, 967 |
| BssAI | RCCGGY | 1 cut(s) | 556 |
| BssECI | CCNNGG | 3 cut(s) | 1512, 1742, 3819 |
| BssNAI | GTATAC | 2 cut(s) | 550, 3907 |
| BssNI | GRCGYC | 2 cut(s) | 1499, 2564 |
| Bst1107I | GTATAC | 2 cut(s) | 550, 3907 |
| Bst2UI | CCWGG | 1 cut(s) | 3821 |
| Bst6I | CTCTTC | 5 cut(s) | 2073, 2597, 3162, 4560, 4808 |
| BstACI | GRCGYC | 2 cut(s) | 1499, 2564 |
| BstAFI | CTTAAG | 8 cut(s) | 373, 1490, 1589, 1631, 2129, 2270, 4337, 4373 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1863 |
| BstAUI | TGTACA | 3 cut(s) | 820, 1550, 4256 |
| BstBI | TTCGAA | 2 cut(s) | 2336, 2492 |
| BstC8I | GCNNGC | 6 cut(s) | 530, 654, 767, 3417, 4354, 4543 |
| BstDSI | CCRYGG | 1 cut(s) | 1742 |
| BstFNI | CGCG | 1 cut(s) | 4691 |
| BstHHI | GCGC | 1 cut(s) | 4541 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 944, 985, 1744, 1854, 1863, 2173, 2605, 3771, 4450 |
| BstNI | CCWGG | 1 cut(s) | 3821 |
| BstNSI | RCATGY | 5 cut(s) | 852, 1405, 3431, 3995, 4111 |
| BstSCI | CCNGG | 2 cut(s) | 3819, 4736 |
| BstSFI | CTRYAG | 2 cut(s) | 2943, 3661 |
| BstSLI | GKGCMC | 2 cut(s) | 1349, 4278 |
| BstUI | CGCG | 1 cut(s) | 4691 |
| BstV2I | GAAGAC | 4 cut(s) | 224, 2270, 3204, 4496 |
| BstX2I | RGATCY | 2 cut(s) | 3445, 3689 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1933, 2734 |
| BstYI | RGATCY | 2 cut(s) | 3445, 3689 |
| BstZ17I | GTATAC | 2 cut(s) | 550, 3907 |
| BsuI | GTATCC | 2 cut(s) | 959, 1087 |
| BsuRI | GGCC | 5 cut(s) | 528, 1517, 3555, 3651, 4352 |
| BtgI | CCRYGG | 1 cut(s) | 1742 |
| BtgZI | GCGATG | 2 cut(s) | 211, 4706 |
| BtsI | GCAGTG | 1 cut(s) | 2929 |
| BtsIMutI | CAGTG | 8 cut(s) | 837, 960, 2210, 2243, 2665, 2929, 3919, 4672 |
| BveI | ACCTGC | 1 cut(s) | 1555 |
| Cac8I | GCNNGC | 6 cut(s) | 530, 654, 767, 3417, 4354, 4543 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2664, 4569 |
| CciI | TCATGA | 3 cut(s) | 1315, 3733, 4021 |
| CfoI | GCGC | 1 cut(s) | 4541 |
| Cfr10I | RCCGGY | 1 cut(s) | 556 |
| Cfr13I | GGNCC | 2 cut(s) | 526, 2758 |
| CseI | GACGC | 1 cut(s) | 1507 |
| Csp6I | GTAC | 9 cut(s) | 634, 788, 821, 1129, 1551, 2305, 3816, 4159, 4257 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1507, 1542 |
| CviQI | GTAC | 9 cut(s) | 634, 788, 821, 1129, 1551, 2305, 3816, 4159, 4257 |
| DraI | TTTAAA | 2 cut(s) | 567, 3271 |
| DraIII | CACNNNGTG | 2 cut(s) | 653, 3416 |
| EaeI | YGGCCR | 1 cut(s) | 4350 |
| Eam1104I | CTCTTC | 5 cut(s) | 2073, 2597, 3162, 4560, 4808 |
| EarI | CTCTTC | 5 cut(s) | 2073, 2597, 3162, 4560, 4808 |
| EciI | GGCGGA | 1 cut(s) | 1748 |
| Ecl136II | GAGCTC | 1 cut(s) | 947 |
| Eco24I | GRGCYC | 1 cut(s) | 949 |
| Eco31I | GGTCTC | 2 cut(s) | 1664, 2693 |
| Eco47I | GGWCC | 1 cut(s) | 2758 |
| Eco53kI | GAGCTC | 1 cut(s) | 947 |
| Eco57I | CTGAAG | 8 cut(s) | 592, 1995, 2621, 3355, 3360, 3895, 4175, 4490 |
| Eco88I | CYCGRG | 4 cut(s) | 669, 1700, 3388, 4418 |
| EcoICRI | GAGCTC | 1 cut(s) | 947 |
| EcoO109I | RGGNCCY | 1 cut(s) | 526 |
| EcoRI | GAATTC | 2 cut(s) | 3542, 4366 |
| EcoRII | CCWGG | 1 cut(s) | 3819 |
| EcoT22I | ATGCAT | 1 cut(s) | 990 |
| EcoT38I | GRGCYC | 1 cut(s) | 949 |
| Esp3I | CGTCTC | 1 cut(s) | 1490 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 590, 622 |
| FauI | CCCGC | 2 cut(s) | 922, 4696 |
| FauNDI | CATATG | 3 cut(s) | 1885, 2085, 4362 |
| FbaI | TGATCA | 1 cut(s) | 448 |
| FblI | GTMKAC | 5 cut(s) | 549, 1392, 2006, 3906, 4098 |
| FriOI | GRGCYC | 1 cut(s) | 949 |
| GlaI | GCGC | 1 cut(s) | 4540 |
| GsaI | CCCAGC | 4 cut(s) | 2442, 2533, 3289, 3328 |
| GsuI | CTGGAG | 1 cut(s) | 914 |
| HaeIII | GGCC | 5 cut(s) | 528, 1517, 3555, 3651, 4352 |
| HapII | CCGG | 5 cut(s) | 557, 2510, 4349, 4559, 4737 |
| HgaI | GACGC | 1 cut(s) | 1507 |
| HhaI | GCGC | 1 cut(s) | 4541 |
| Hin1I | GRCGYC | 2 cut(s) | 1499, 2564 |
| Hin6I | GCGC | 1 cut(s) | 4539 |
| HinP1I | GCGC | 1 cut(s) | 4539 |
| HincII | GTYRAC | 4 cut(s) | 1393, 2453, 3840, 4099 |
| HindII | GTYRAC | 4 cut(s) | 1393, 2453, 3840, 4099 |
| HindIII | AAGCTT | 3 cut(s) | 1161, 1442, 4412 |
| HpaII | CCGG | 5 cut(s) | 557, 2510, 4349, 4559, 4737 |
| HphI | GGTGA | 5 cut(s) | 184, 326, 1562, 1804, 4073 |
| Hpy99I | CGWCG | 1 cut(s) | 1029 |
| HpyAV | CCTTC | 9 cut(s) | 616, 1133, 1538, 2651, 3002, 3116, 3379, 3599, 4133 |
| HpyCH4IV | ACGT | 2 cut(s) | 2564, 4501 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 944, 985, 1744, 1854, 1863, 2173, 2605, 3771, 4450 |
| HpySE526I | ACGT | 2 cut(s) | 2564, 4501 |
| Hsp92I | GRCGYC | 2 cut(s) | 1499, 2564 |
| HspAI | GCGC | 1 cut(s) | 4539 |
| Kpn2I | TCCGGA | 2 cut(s) | 2509, 4558 |
| KpnI | GGTACC | 1 cut(s) | 3819 |
| Ksp22I | TGATCA | 1 cut(s) | 448 |
| LmnI | GCTCC | 8 cut(s) | 701, 1735, 2971, 3110, 3461, 3957, 3977, 4441 |
| LweI | GCATC | 8 cut(s) | 448, 975, 1393, 1425, 3027, 3490, 4365, 4575 |
| MaeII | ACGT | 2 cut(s) | 2564, 4501 |
| MfeI | CAATTG | 4 cut(s) | 2196, 2589, 2858, 3378 |
| MflI | RGATCY | 2 cut(s) | 3445, 3689 |
| MhlI | GDGCHC | 7 cut(s) | 163, 270, 949, 1349, 2708, 4278, 4613 |
| MlyI | GAGTC | 7 cut(s) | 1618, 2047, 2284, 2425, 4731, 4740, 4766 |
| MmeI | TCCRAC | 5 cut(s) | 97, 169, 2809, 3498, 4647 |
| Mph1103I | ATGCAT | 1 cut(s) | 990 |
| MroI | TCCGGA | 2 cut(s) | 2509, 4558 |
| MroXI | GAANNNNTTC | 3 cut(s) | 32, 336, 3048 |
| MslI | CAYNNNNRTG | 7 cut(s) | 1974, 2084, 2184, 2556, 2738, 2847, 4361 |
| MspA1I | CMGCKG | 1 cut(s) | 2948 |
| MspCI | CTTAAG | 8 cut(s) | 373, 1490, 1589, 1631, 2129, 2270, 4337, 4373 |
| MspI | CCGG | 5 cut(s) | 557, 2510, 4349, 4559, 4737 |
| MspR9I | CCNGG | 2 cut(s) | 3821, 4738 |
| MunI | CAATTG | 4 cut(s) | 2196, 2589, 2858, 3378 |
| Mva1269I | GAATGC | 4 cut(s) | 330, 626, 2054, 2079 |
| MvaI | CCWGG | 1 cut(s) | 3821 |
| MvnI | CGCG | 1 cut(s) | 4691 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 944, 985, 1744, 1854, 1863, 2173, 2605, 3771, 4450 |
| NciI | CCSGG | 1 cut(s) | 4738 |
| NdeI | CATATG | 3 cut(s) | 1885, 2085, 4362 |
| NheI | GCTAGC | 1 cut(s) | 4541 |
| NlaIV | GGNNCC | 7 cut(s) | 703, 1346, 1438, 3106, 3817, 3973, 4144 |
| NmuCI | GTSAC | 4 cut(s) | 952, 1810, 2673, 4181 |
| NsiI | ATGCAT | 1 cut(s) | 990 |
| NspI | RCATGY | 5 cut(s) | 852, 1405, 3431, 3995, 4111 |
| NspV | TTCGAA | 2 cut(s) | 2336, 2492 |
| PaeR7I | CTCGAG | 2 cut(s) | 1700, 3388 |
| PagI | TCATGA | 3 cut(s) | 1315, 3733, 4021 |
| PciI | ACATGT | 1 cut(s) | 3991 |
| PctI | GAATGC | 4 cut(s) | 330, 626, 2054, 2079 |
| PdmI | GAANNNNTTC | 3 cut(s) | 32, 336, 3048 |
| PfeI | GAWTC | 7 cut(s) | 348, 1031, 1197, 1636, 2240, 3060, 4090 |
| PflFI | GACNNNGTC | 1 cut(s) | 2660 |
| PleI | GAGTC | 7 cut(s) | 1617, 2046, 2283, 2425, 4730, 4739, 4765 |
| PpsI | GAGTC | 7 cut(s) | 1617, 2046, 2283, 2425, 4730, 4739, 4765 |
| PscI | ACATGT | 1 cut(s) | 3991 |
| PshBI | ATTAAT | 4 cut(s) | 1269, 3581, 3978, 4173 |
| PsiI | TTATAA | 3 cut(s) | 285, 509, 2519 |
| Psp124BI | GAGCTC | 1 cut(s) | 949 |
| Psp6I | CCWGG | 1 cut(s) | 3819 |
| PspFI | CCCAGC | 4 cut(s) | 2438, 2529, 3285, 3324 |
| PspGI | CCWGG | 1 cut(s) | 3819 |
| PspN4I | GGNNCC | 7 cut(s) | 703, 1346, 1438, 3106, 3817, 3973, 4144 |
| PspPI | GGNCC | 2 cut(s) | 526, 2758 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 915, 947 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2664, 4569 |
| PsuI | RGATCY | 2 cut(s) | 3445, 3689 |
| PsyI | GACNNNGTC | 1 cut(s) | 2660 |
| PvuII | CAGCTG | 1 cut(s) | 2948 |
| RsaI | GTAC | 9 cut(s) | 635, 789, 822, 1130, 1552, 2306, 3817, 4160, 4258 |
| RsaNI | GTAC | 9 cut(s) | 634, 788, 821, 1129, 1551, 2305, 3816, 4159, 4257 |
| RseI | CAYNNNNRTG | 7 cut(s) | 1974, 2084, 2184, 2556, 2738, 2847, 4361 |
| SacI | GAGCTC | 1 cut(s) | 949 |
| SalI | GTCGAC | 2 cut(s) | 1391, 4097 |
| Sau96I | GGNCC | 2 cut(s) | 526, 2758 |
| ScaI | AGTACT | 1 cut(s) | 4160 |
| SchI | GAGTC | 7 cut(s) | 1618, 2047, 2284, 2425, 4731, 4740, 4766 |
| ScrFI | CCNGG | 2 cut(s) | 3821, 4738 |
| SduI | GDGCHC | 7 cut(s) | 163, 270, 949, 1349, 2708, 4278, 4613 |
| SfaNI | GCATC | 8 cut(s) | 448, 975, 1393, 1425, 3027, 3490, 4365, 4575 |
| SfcI | CTRYAG | 2 cut(s) | 2943, 3661 |
| Sfr274I | CTCGAG | 2 cut(s) | 1700, 3388 |
| SfuI | TTCGAA | 2 cut(s) | 2336, 2492 |
| SinI | GGWCC | 1 cut(s) | 2758 |
| SlaI | CTCGAG | 2 cut(s) | 1700, 3388 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 1974, 2084, 2184, 2556, 2738, 2847, 4361 |
| SsiI | CCGC | 5 cut(s) | 915, 1414, 1733, 3799, 4689 |
| SstI | GAGCTC | 1 cut(s) | 949 |
| StyD4I | CCNGG | 2 cut(s) | 3819, 4736 |
| TaiI | ACGT | 2 cut(s) | 2567, 4504 |
| TatI | WGTACW | 6 cut(s) | 633, 787, 820, 1550, 4158, 4256 |
| TauI | GCSGC | 1 cut(s) | 1416 |
| TfiI | GAWTC | 7 cut(s) | 348, 1031, 1197, 1636, 2240, 3060, 4090 |
| TscAI | CASTG | 8 cut(s) | 837, 967, 2217, 2250, 2665, 2929, 3919, 4672 |
| TseFI | GTSAC | 4 cut(s) | 952, 1810, 2673, 4181 |
| Tsp45I | GTSAC | 4 cut(s) | 952, 1810, 2673, 4181 |
| TspGWI | ACGGA | 4 cut(s) | 1013, 1106, 1643, 3524 |
| TspRI | CASTG | 8 cut(s) | 837, 967, 2217, 2250, 2665, 2929, 3919, 4672 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2660 |
| Vha464I | CTTAAG | 8 cut(s) | 373, 1490, 1589, 1631, 2129, 2270, 4337, 4373 |
| VneI | GTGCAC | 1 cut(s) | 4274 |
| VpaK11BI | GGWCC | 1 cut(s) | 2758 |
| VspI | ATTAAT | 4 cut(s) | 1269, 3581, 3978, 4173 |
| XbaI | TCTAGA | 1 cut(s) | 838 |
| XceI | RCATGY | 5 cut(s) | 852, 1405, 3431, 3995, 4111 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 109, 388 |
| XhoI | CTCGAG | 2 cut(s) | 1700, 3388 |
| XmiI | GTMKAC | 5 cut(s) | 549, 1392, 2006, 3906, 4098 |
| XmnI | GAANNNNTTC | 3 cut(s) | 32, 336, 3048 |
| ZraI | GACGTC | 1 cut(s) | 2565 |
| ZrmI | AGTACT | 1 cut(s) | 4160 |
| Zsp2I | ATGCAT | 1 cut(s) | 990 |