Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 26 |
| AciI | CCGC | 3 cut(s) | 24, 422, 425 |
| AcoI | YGGCCR | 1 cut(s) | 204 |
| AcsI | RAATTY | 2 cut(s) | 311, 323 |
| AfaI | GTAC | 4 cut(s) | 190, 290, 433, 454 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 89, 395, 400 |
| AgsI | TTSAA | 2 cut(s) | 154, 299 |
| Ama87I | CYCGRG | 1 cut(s) | 394 |
| AoxI | GGCC | 2 cut(s) | 204, 398 |
| ApoI | RAATTY | 2 cut(s) | 311, 323 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 326, 358 |
| AspS9I | GGNCC | 1 cut(s) | 398 |
| AsuC2I | CCSGG | 2 cut(s) | 395, 396 |
| AvaI | CYCGRG | 1 cut(s) | 394 |
| BalI | TGGCCA | 1 cut(s) | 206 |
| BccI | CCATC | 2 cut(s) | 279, 466 |
| BcnI | CCSGG | 2 cut(s) | 395, 396 |
| BfaI | CTAG | 1 cut(s) | 194 |
| BisI | GCNGC | 1 cut(s) | 423 |
| BlsI | GCNGC | 1 cut(s) | 424 |
| Bme1390I | CCNGG | 2 cut(s) | 395, 396 |
| BmeT110I | CYCGRG | 1 cut(s) | 394 |
| BmgT120I | GGNCC | 1 cut(s) | 398 |
| BmiI | GGNNCC | 1 cut(s) | 399 |
| BmrFI | CCNGG | 2 cut(s) | 395, 396 |
| BmrI | ACTGGG | 1 cut(s) | 301 |
| BmsI | GCATC | 2 cut(s) | 4, 453 |
| BmuI | ACTGGG | 1 cut(s) | 301 |
| BpmI | CTGGAG | 1 cut(s) | 210 |
| BpuMI | CCSGG | 2 cut(s) | 395, 396 |
| BsaJI | CCNNGG | 2 cut(s) | 394, 395 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 89, 395, 400 |
| Bse118I | RCCGGY | 1 cut(s) | 400 |
| Bse1I | ACTGG | 3 cut(s) | 227, 296, 448 |
| Bse3DI | GCAATG | 1 cut(s) | 275 |
| BseDI | CCNNGG | 2 cut(s) | 394, 395 |
| BseGI | GGATG | 2 cut(s) | 415, 481 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 89, 395, 400 |
| BseMI | GCAATG | 1 cut(s) | 275 |
| BseNI | ACTGG | 3 cut(s) | 227, 296, 448 |
| BseRI | GAGGAG | 1 cut(s) | 431 |
| BshFI | GGCC | 2 cut(s) | 206, 400 |
| BsiHKCI | CYCGRG | 1 cut(s) | 394 |
| BsiSI | CCGG | 3 cut(s) | 177, 395, 401 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 89, 395, 400 |
| BsnI | GGCC | 2 cut(s) | 206, 400 |
| BsoBI | CYCGRG | 1 cut(s) | 394 |
| Bsp1407I | TGTACA | 1 cut(s) | 452 |
| Bsp143I | GATC | 1 cut(s) | 73 |
| BspACI | CCGC | 3 cut(s) | 24, 422, 425 |
| BspANI | GGCC | 2 cut(s) | 206, 400 |
| BspLI | GGNNCC | 1 cut(s) | 399 |
| BsrBI | CCGCTC | 1 cut(s) | 26 |
| BsrDI | GCAATG | 1 cut(s) | 275 |
| BsrFI | RCCGGY | 1 cut(s) | 400 |
| BsrGI | TGTACA | 1 cut(s) | 452 |
| BsrI | ACTGG | 3 cut(s) | 227, 296, 448 |
| BssAI | RCCGGY | 1 cut(s) | 400 |
| BssECI | CCNNGG | 2 cut(s) | 394, 395 |
| BssMI | GATC | 1 cut(s) | 73 |
| Bst6I | CTCTTC | 1 cut(s) | 408 |
| BstAUI | TGTACA | 1 cut(s) | 452 |
| BstC8I | GCNNGC | 1 cut(s) | 402 |
| BstF5I | GGATG | 2 cut(s) | 415, 481 |
| BstKTI | GATC | 1 cut(s) | 76 |
| BstMBI | GATC | 1 cut(s) | 73 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 23 |
| BstSCI | CCNGG | 2 cut(s) | 393, 394 |
| BsuRI | GGCC | 2 cut(s) | 206, 400 |
| BtsCI | GGATG | 2 cut(s) | 415, 481 |
| BtsIMutI | CAGTG | 2 cut(s) | 234, 455 |
| Cac8I | GCNNGC | 1 cut(s) | 402 |
| Cfr10I | RCCGGY | 1 cut(s) | 400 |
| Cfr13I | GGNCC | 1 cut(s) | 398 |
| Cfr9I | CCCGGG | 1 cut(s) | 394 |
| Csp6I | GTAC | 4 cut(s) | 189, 289, 432, 453 |
| CviAII | CATG | 3 cut(s) | 208, 377, 390 |
| CviJI | RGCY | 6 cut(s) | 110, 180, 200, 206, 400, 404 |
| CviKI_1 | RGCY | 6 cut(s) | 110, 180, 200, 206, 400, 404 |
| CviQI | GTAC | 4 cut(s) | 189, 289, 432, 453 |
| DpnI | GATC | 1 cut(s) | 75 |
| DpnII | GATC | 1 cut(s) | 73 |
| EaeI | YGGCCR | 1 cut(s) | 204 |
| Eam1104I | CTCTTC | 1 cut(s) | 408 |
| EarI | CTCTTC | 1 cut(s) | 408 |
| EciI | GGCGGA | 1 cut(s) | 440 |
| Eco88I | CYCGRG | 1 cut(s) | 394 |
| EcoRI | GAATTC | 1 cut(s) | 311 |
| FaeI | CATG | 3 cut(s) | 211, 380, 393 |
| FaiI | YATR | 9 cut(s) | 20, 79, 122, 183, 209, 213, 333, 378, 391 |
| FatI | CATG | 3 cut(s) | 207, 376, 389 |
| Fnu4HI | GCNGC | 1 cut(s) | 423 |
| FokI | GGATG | 1 cut(s) | 422 |
| Fsp4HI | GCNGC | 1 cut(s) | 423 |
| FspBI | CTAG | 1 cut(s) | 194 |
| GluI | GCNGC | 1 cut(s) | 423 |
| GsuI | CTGGAG | 1 cut(s) | 210 |
| HaeIII | GGCC | 2 cut(s) | 206, 400 |
| HapII | CCGG | 3 cut(s) | 177, 395, 401 |
| Hin1II | CATG | 3 cut(s) | 211, 380, 393 |
| HpaII | CCGG | 3 cut(s) | 177, 395, 401 |
| Hpy166II | GTNNAC | 1 cut(s) | 453 |
| Hpy188I | TCNGA | 2 cut(s) | 166, 462 |
| Hpy8I | GTNNAC | 1 cut(s) | 453 |
| HpyCH4V | TGCA | 4 cut(s) | 47, 53, 143, 280 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 23 |
| Hsp92II | CATG | 3 cut(s) | 211, 380, 393 |
| KroI | GCCGGC | 1 cut(s) | 400 |
| KroNI | GCCGGC | 1 cut(s) | 402 |
| Kzo9I | GATC | 1 cut(s) | 73 |
| LmnI | GCTCC | 1 cut(s) | 166 |
| LweI | GCATC | 2 cut(s) | 4, 453 |
| MaeI | CTAG | 1 cut(s) | 194 |
| MaeIII | GTNAC | 1 cut(s) | 99 |
| MalI | GATC | 1 cut(s) | 75 |
| MbiI | CCGCTC | 1 cut(s) | 26 |
| MboI | GATC | 1 cut(s) | 73 |
| MboII | GAAGA | 5 cut(s) | 73, 311, 360, 425, 481 |
| MlsI | TGGCCA | 1 cut(s) | 206 |
| MluCI | AATT | 4 cut(s) | 311, 323, 338, 456 |
| MluNI | TGGCCA | 1 cut(s) | 206 |
| MmeI | TCCRAC | 2 cut(s) | 107, 361 |
| MnlI | CCTC | 5 cut(s) | 16, 49, 409, 412, 421 |
| Mox20I | TGGCCA | 1 cut(s) | 206 |
| MroNI | GCCGGC | 1 cut(s) | 400 |
| MscI | TGGCCA | 1 cut(s) | 206 |
| MseI | TTAA | 1 cut(s) | 484 |
| Msp20I | TGGCCA | 1 cut(s) | 206 |
| MspI | CCGG | 3 cut(s) | 177, 395, 401 |
| MspR9I | CCNGG | 2 cut(s) | 395, 396 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 23 |
| NaeI | GCCGGC | 1 cut(s) | 402 |
| NciI | CCSGG | 2 cut(s) | 395, 396 |
| NdeII | GATC | 1 cut(s) | 73 |
| NgoMIV | GCCGGC | 1 cut(s) | 400 |
| NlaIII | CATG | 3 cut(s) | 211, 380, 393 |
| NlaIV | GGNNCC | 1 cut(s) | 399 |
| PdiI | GCCGGC | 1 cut(s) | 402 |
| PkrI | GCNGC | 1 cut(s) | 424 |
| PspN4I | GGNNCC | 1 cut(s) | 399 |
| PspPI | GGNCC | 1 cut(s) | 398 |
| RsaI | GTAC | 4 cut(s) | 190, 290, 433, 454 |
| RsaNI | GTAC | 4 cut(s) | 189, 289, 432, 453 |
| SaqAI | TTAA | 1 cut(s) | 484 |
| SatI | GCNGC | 1 cut(s) | 423 |
| Sau3AI | GATC | 1 cut(s) | 73 |
| Sau96I | GGNCC | 1 cut(s) | 398 |
| ScrFI | CCNGG | 2 cut(s) | 395, 396 |
| SetI | ASST | 3 cut(s) | 8, 72, 159 |
| SfaNI | GCATC | 2 cut(s) | 4, 453 |
| SmaI | CCCGGG | 1 cut(s) | 396 |
| Sse9I | AATT | 4 cut(s) | 311, 323, 338, 456 |
| SsiI | CCGC | 3 cut(s) | 24, 422, 425 |
| SspMI | CTAG | 1 cut(s) | 194 |
| StyD4I | CCNGG | 2 cut(s) | 393, 394 |
| TaqI | TCGA | 1 cut(s) | 265 |
| TasI | AATT | 4 cut(s) | 311, 323, 338, 456 |
| TatI | WGTACW | 1 cut(s) | 452 |
| TauI | GCSGC | 1 cut(s) | 425 |
| Tru1I | TTAA | 1 cut(s) | 484 |
| Tru9I | TTAA | 1 cut(s) | 484 |
| TscAI | CASTG | 2 cut(s) | 234, 455 |
| TspDTI | ATGAA | 3 cut(s) | 317, 318, 426 |
| TspMI | CCCGGG | 1 cut(s) | 394 |
| TspRI | CASTG | 2 cut(s) | 234, 455 |
| XapI | RAATTY | 2 cut(s) | 311, 323 |
| XmaI | CCCGGG | 1 cut(s) | 394 |
| XspI | CTAG | 1 cut(s) | 194 |