Rmu_sc0037030.1_g000001

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0037030.1
OG0000187
Physical Location & Seq
Reverse (-)
481 .. 2454
1974 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0037030.1_g000001.1.cds

Sequence Viewer

Length: 927 bp
atgagaattcaaagagtgcatgtattcctacttctacaagagatatttcaaggccagggtttgagacaagcaaatgtgttcttcgtgggcaaacttctcatagcccgtgatttcaagatcaagtcattcataggggtgtttctcaacgcttggaggattaatggagcgttgcaggtggaggaagtggaggagcagagggtgctcttcacgctgtcagatcctgcttatagggttcggatatggcgaggtgtgccatggggttataaccatgctccggtcgctttggcttggtatgatggcatcataccggttgaaaaagttcccttgactatggcgtcgtattggattacccttcaggggatcccgccggcgttccgatttgaacgagtcatgactatgataggatacacattaggggacttccaggatatcgataaaaatgccaagaaggtcgggaagctccgaattatggttgaaattccgcttagcaagcctttgccattcaagcgatggtatttggtggaggatgaggttgagtttcgatgcacttttcggtatgacaagcttttcgggcagtgctcaaactgtggtcttgtaactcatgtgagactgtcatgctcaaggccggtgctggatgaggatgatgacggtgggtcaacttctagcactgctagtagcagcggggtcaatactggtatgagggctagggtttctaccccgtgcccttcgttggtgtttcggtctccagtccctggtcaagcctgtgagccctcattgggtgtcttgtttccgaagcagaagcagcaggtggtggtgcatgaccttcatgaaacagttggaactccggaaggactaagtggcaaaagtcgaggtcgcgaagatggcttgactatatcccctaagaagttgaagttggtttggctgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

308

Amino Acids

34.76

Weight (kDa)

9.3

Isoelectric Point (pI)

39.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000187)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20170 FvH4_4g06831
rosa_chinensis RchiOBHm_Chr1g0321991 RchiOBHm_Chr2g0161811
rosa_laevigata RLG00000015375 RLG00000018377
rosa_multiflora Rmu_co8011754.1_g000001 Rmu_co8019986.1_g000001 Rmu_co8067766.1_g000001 Rmu_co8156128.1_g000001 Rmu_co8219154.1_g000003 Rmu_co8297235.1_g000001 Rmu_co8345223.1_g000001 Rmu_co8364775.1_g000001 Rmu_co8465075.1_g000001 Rmu_sc0000007.1_g000002 Rmu_sc0000054.1_g000015 Rmu_sc0000054.1_g000023 Rmu_sc0000145.1_g000010 Rmu_sc0000166.1_g000006 Rmu_sc0000218.1_g000012 Rmu_sc0000339.1_g000008 Rmu_sc0000342.1_g000015 Rmu_sc0000464.1_g000008 Rmu_sc0000620.1_g000003 Rmu_sc0000638.1_g000017 Rmu_sc0000890.1_g000007 Rmu_sc0000894.1_g000024 Rmu_sc0000909.1_g000010 Rmu_sc0000928.1_g000020 Rmu_sc0000977.1_g000007 Rmu_sc0001022.1_g000003 Rmu_sc0001035.1_g000037 Rmu_sc0001060.1_g000008 Rmu_sc0001168.1_g000005 Rmu_sc0001173.1_g000022 Rmu_sc0001179.1_g000016 Rmu_sc0001408.1_g000003 Rmu_sc0001455.1_g000005 Rmu_sc0001484.1_g000008 Rmu_sc0001585.1_g000010 Rmu_sc0001702.1_g000030 Rmu_sc0001755.1_g000063 Rmu_sc0001903.1_g000009 Rmu_sc0002099.1_g000001 Rmu_sc0002142.1_g000012 Rmu_sc0002158.1_g000014 Rmu_sc0002307.1_g000009 Rmu_sc0002358.1_g000013 Rmu_sc0002421.1_g000002 Rmu_sc0002426.1_g000003 Rmu_sc0002438.1_g000001 Rmu_sc0002461.1_g000001 Rmu_sc0002508.1_g000003 Rmu_sc0002532.1_g000056 Rmu_sc0002583.1_g000002 Rmu_sc0002927.1_g000033 Rmu_sc0003033.1_g000040 Rmu_sc0003271.1_g000006 Rmu_sc0003381.1_g000006 Rmu_sc0003507.1_g000007 Rmu_sc0003578.1_g000003 Rmu_sc0003693.1_g000004 Rmu_sc0003693.1_g000005 Rmu_sc0003704.1_g000003 Rmu_sc0003840.1_g000002 Rmu_sc0004084.1_g000026 Rmu_sc0004193.1_g000007 Rmu_sc0004234.1_g000033 Rmu_sc0004235.1_g000025 Rmu_sc0004435.1_g000006 Rmu_sc0004727.1_g000003 Rmu_sc0004741.1_g000001 Rmu_sc0004926.1_g000004 Rmu_sc0005365.1_g000001 Rmu_sc0005392.1_g000007 Rmu_sc0005415.1_g000001 Rmu_sc0005539.1_g000007 Rmu_sc0005708.1_g000017 Rmu_sc0006317.1_g000007 Rmu_sc0006453.1_g000054 Rmu_sc0006536.1_g000004 Rmu_sc0006740.1_g000022 Rmu_sc0006763.1_g000012 Rmu_sc0007115.1_g000002 Rmu_sc0007115.1_g000010 Rmu_sc0007129.1_g000017 Rmu_sc0007131.1_g000010 Rmu_sc0008373.1_g000008 Rmu_sc0009005.1_g000008 Rmu_sc0009252.1_g000007 Rmu_sc0009599.1_g000022 Rmu_sc0009785.1_g000027 Rmu_sc0009891.1_g000003 Rmu_sc0010099.1_g000010 Rmu_sc0010266.1_g000008 Rmu_sc0010334.1_g000003 Rmu_sc0010381.1_g000001 Rmu_sc0010496.1_g000003 Rmu_sc0010496.1_g000004 Rmu_sc0010546.1_g000003 Rmu_sc0011482.1_g000006 Rmu_sc0011875.1_g000010 Rmu_sc0011917.1_g000006 Rmu_sc0012293.1_g000004 Rmu_sc0012847.1_g000003 Rmu_sc0013773.1_g000001 Rmu_sc0016060.1_g000003 Rmu_sc0016170.1_g000013 Rmu_sc0016393.1_g000002 Rmu_sc0017589.1_g000001 Rmu_sc0017786.1_g000005 Rmu_sc0018326.1_g000002 Rmu_sc0020760.1_g000001 Rmu_sc0021262.1_g000003 Rmu_sc0023851.1_g000002 Rmu_sc0024044.1_g000001 Rmu_sc0026820.1_g000001 Rmu_sc0032306.1_g000001 Rmu_sc0035666.1_g000001 Rmu_sc0036881.1_g000001 Rmu_sc0037030.1_g000001 Rmu_sc0037158.1_g000001 Rmu_ssc0000016.1_g000002 Rmu_ssc0000044.1_g000012 Rmu_ssc0000044.1_g000014 Rmu_ssc0000050.1_g000064 Rmu_ssc0000064.1_g000022 Rmu_ssc0000154.1_g000037 Rmu_ssc0000178.1_g000013 Rmu_ssc0000217.1_g000022 Rmu_ssc0000392.1_g000004
rosa_roxburghii Rroxscaffold_3G00242000 Rroxscaffold_3G00242530 Rroxscaffold_6G00406010
rosa_rugosa Rorug01G0062000 Rorug02G0224000 Rorug02G0262900 Rorug02G0263000 Rorug02G0358900 Rorug02G0360500 Rorug02G0378500.1 Rorug02G0378600 Rorug02G0394700 Rorug03G0122900 Rorug03G0254600 Rorug03G0254700 Rorug03G0254800 Rorug04G0042200.1 Rorug04G0378100 Rorug05G0053400 Rorug05G0238600 Rorug05G0364500 Rorug05G0562000 Rorug06G0089300 Rorug06G0089400 Rorug06G0145700 Rorug07G0111600 Rorug07G0229500.1 Rorug07G0287600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 264
AarI CACCTGC 2 cut(s) 163, 796
AasI GACNNNNNNGTC 1 cut(s) 334
Acc36I ACCTGC 2 cut(s) 163, 796
AccB7I CCANNNNNTGG 1 cut(s) 752
AccII CGCG 1 cut(s) 876
AccIII TCCGGA 1 cut(s) 844
AciI CCGC 3 cut(s) 365, 482, 681
AclWI GGATC 3 cut(s) 212, 355, 368
AcsI RAATTY 2 cut(s) 6, 477
AcuI CTGAAG 1 cut(s) 338
AcyI GRCGYC 1 cut(s) 335
AfiI CCNNNNNNNGG 6 cut(s) 274, 357, 469, 730, 752, 776
AgeI ACCGGT 1 cut(s) 307
AgsI TTSAA 8 cut(s) 11, 50, 115, 314, 383, 476, 505, 910
AhdI GACNNNNNGTC 1 cut(s) 652
AjnI CCWGG 3 cut(s) 54, 423, 751
AjuI GAANNNNNNNTTGG 1 cut(s) 896
AluBI AGCT 2 cut(s) 460, 565
AluI AGCT 2 cut(s) 460, 565
Alw21I GWGCWC 2 cut(s) 204, 581
Alw26I GTCTC 3 cut(s) 58, 601, 747
AlwI GGATC 3 cut(s) 212, 355, 368
AlwNI CAGNNNCTG 2 cut(s) 221, 752
Aor13HI TCCGGA 1 cut(s) 844
AoxI GGCC 2 cut(s) 52, 623
ApeKI GCWGC 2 cut(s) 678, 802
ApoI RAATTY 2 cut(s) 6, 477
ArsI GACNNNNNNTTYG 2 cut(s) 551, 583
AseI ATTAAT 1 cut(s) 159
AsiGI ACCGGT 1 cut(s) 307
Asp700I GAANNNNTTC 1 cut(s) 318
BaeGI GKGCMC 1 cut(s) 725
BamHI GGATCC 1 cut(s) 360
BanII GRGCYC 1 cut(s) 771
BarI GAAGNNNNNNTAC 2 cut(s) 15, 47
Bbv12I GWGCWC 2 cut(s) 204, 581
BbvI GCAGC 2 cut(s) 690, 814
BccI CCATC 3 cut(s) 290, 504, 875
BcgI CGANNNNNNTGC 2 cut(s) 422, 456
BciT130I CCWGG 3 cut(s) 56, 425, 753
BciVI GTATCC 1 cut(s) 398
BcoDI GTCTC 3 cut(s) 58, 601, 747
BfaI CTAG 3 cut(s) 663, 672, 705
BfmI CTRYAG 1 cut(s) 923
BfuAI ACCTGC 2 cut(s) 163, 796
BfuI GTATCC 1 cut(s) 398
BisI GCNGC 2 cut(s) 679, 803
BlpI GCTNAGC 1 cut(s) 485
BlsI GCNGC 2 cut(s) 680, 804
Bme1390I CCNGG 3 cut(s) 56, 425, 753
BmeRI GACNNNNNGTC 1 cut(s) 652
BmiI GGNNCC 1 cut(s) 362
BmrFI CCNGG 3 cut(s) 56, 425, 753
BmsI GCATC 2 cut(s) 309, 533
BpmI CTGGAG 1 cut(s) 729
Bpu1102I GCTNAGC 1 cut(s) 485
BpuEI CTTGAG 1 cut(s) 604
Bsa29I ATCGAT 1 cut(s) 432
BsaHI GRCGYC 1 cut(s) 335
BsaI GGTCTC 1 cut(s) 747
BsaJI CCNNGG 3 cut(s) 55, 254, 751
BsaWI WCCGGW 3 cut(s) 274, 307, 844
Bsc4I CCNNNNNNNGG 6 cut(s) 274, 357, 469, 730, 752, 776
Bse118I RCCGGY 3 cut(s) 307, 367, 625
Bse1I ACTGG 2 cut(s) 697, 746
BseAI TCCGGA 1 cut(s) 844
BseBI CCWGG 3 cut(s) 56, 425, 753
BseCI ATCGAT 1 cut(s) 432
BseDI CCNNGG 3 cut(s) 55, 254, 751
BseGI GGATG 3 cut(s) 532, 640, 646
BseLI CCNNNNNNNGG 6 cut(s) 274, 357, 469, 730, 752, 776
BseNI ACTGG 2 cut(s) 697, 746
BseRI GAGGAG 1 cut(s) 203
BseSI GKGCMC 1 cut(s) 725
BseXI GCAGC 2 cut(s) 690, 814
Bsh1236I CGCG 1 cut(s) 876
Bsh1285I CGRYCG 1 cut(s) 279
BshFI GGCC 2 cut(s) 54, 625
BshTI ACCGGT 1 cut(s) 307
BshVI ATCGAT 1 cut(s) 432
BsiEI CGRYCG 1 cut(s) 279
BsiHKAI GWGCWC 2 cut(s) 204, 581
BsiSI CCGG 5 cut(s) 275, 308, 368, 626, 845
BslFI GGGAC 2 cut(s) 431, 734
BslI CCNNNNNNNGG 6 cut(s) 274, 357, 469, 730, 752, 776
BsmAI GTCTC 3 cut(s) 58, 601, 747
BsmFI GGGAC 2 cut(s) 431, 734
BsnI GGCC 2 cut(s) 54, 625
Bso31I GGTCTC 1 cut(s) 747
Bsp1286I GDGCHC 4 cut(s) 204, 581, 725, 771
Bsp13I TCCGGA 1 cut(s) 844
Bsp143I GATC 3 cut(s) 117, 217, 360
Bsp1720I GCTNAGC 1 cut(s) 485
Bsp19I CCATGG 1 cut(s) 254
Bsp68I TCGCGA 1 cut(s) 876
BspACI CCGC 3 cut(s) 365, 482, 681
BspANI GGCC 2 cut(s) 54, 625
BspDI ATCGAT 1 cut(s) 432
BspEI TCCGGA 1 cut(s) 844
BspFNI CGCG 1 cut(s) 876
BspHI TCATGA 2 cut(s) 390, 826
BspLI GGNNCC 1 cut(s) 362
BspMI ACCTGC 2 cut(s) 163, 796
BspPI GGATC 3 cut(s) 212, 355, 368
BspQI GCTCTTC 1 cut(s) 209
BspTNI GGTCTC 1 cut(s) 747
BsrFI RCCGGY 3 cut(s) 307, 367, 625
BsrI ACTGG 2 cut(s) 697, 746
BssAI RCCGGY 3 cut(s) 307, 367, 625
BssECI CCNNGG 3 cut(s) 55, 254, 751
BssMI GATC 3 cut(s) 117, 217, 360
BssNI GRCGYC 1 cut(s) 335
BssT1I CCWWGG 1 cut(s) 254
Bst2UI CCWGG 3 cut(s) 56, 425, 753
Bst4CI ACNGT 4 cut(s) 587, 612, 650, 835
Bst6I CTCTTC 1 cut(s) 209
BstACI GRCGYC 1 cut(s) 335
BstAPI GCANNNNNTGC 1 cut(s) 199
BstC8I GCNNGC 2 cut(s) 369, 491
BstDEI CTNAG 3 cut(s) 485, 854, 900
BstDSI CCRYGG 1 cut(s) 254
BstF5I GGATG 3 cut(s) 532, 640, 646
BstFNI CGCG 1 cut(s) 876
BstKTI GATC 3 cut(s) 120, 220, 363
BstMAI GTCTC 3 cut(s) 58, 601, 747
BstMBI GATC 3 cut(s) 117, 217, 360
BstMCI CGRYCG 1 cut(s) 279
BstMWI GCNNNNNNNGC 9 cut(s) 199, 208, 250, 278, 490, 505, 571, 802, 882
BstNI CCWGG 3 cut(s) 56, 425, 753
BstNSI RCATGY 1 cut(s) 23
BstSCI CCNGG 3 cut(s) 54, 423, 751
BstSFI CTRYAG 1 cut(s) 923
BstSLI GKGCMC 1 cut(s) 725
BstUI CGCG 1 cut(s) 876
BstV1I GCAGC 2 cut(s) 690, 814
BstX2I RGATCY 2 cut(s) 217, 360
BstYI RGATCY 2 cut(s) 217, 360
Bsu15I ATCGAT 1 cut(s) 432
BsuI GTATCC 1 cut(s) 398
BsuRI GGCC 2 cut(s) 54, 625
BsuTUI ATCGAT 1 cut(s) 432
BtgI CCRYGG 1 cut(s) 254
BtgZI GCGATG 1 cut(s) 523
BtsCI GGATG 3 cut(s) 532, 640, 646
BtsI GCAGTG 2 cut(s) 581, 666
BtsIMutI CAGTG 2 cut(s) 581, 666
BtuMI TCGCGA 1 cut(s) 876
BveI ACCTGC 2 cut(s) 163, 796
Cac8I GCNNGC 2 cut(s) 369, 491
CaiI CAGNNNCTG 2 cut(s) 221, 752
CciI TCATGA 2 cut(s) 390, 826
Cfr10I RCCGGY 3 cut(s) 307, 367, 625
ClaI ATCGAT 1 cut(s) 432
CseI GACGC 1 cut(s) 324
CspAI ACCGGT 1 cut(s) 307
CviAII CATG 8 cut(s) 20, 255, 269, 391, 602, 615, 818, 827
DdeI CTNAG 3 cut(s) 485, 854, 900
DpnI GATC 3 cut(s) 119, 219, 362
DpnII GATC 3 cut(s) 117, 217, 360
DrdI GACNNNNNNGTC 1 cut(s) 334
DriI GACNNNNNGTC 1 cut(s) 652
DseDI GACNNNNNNGTC 1 cut(s) 334
Eam1104I CTCTTC 1 cut(s) 209
Eam1105I GACNNNNNGTC 1 cut(s) 652
EarI CTCTTC 1 cut(s) 209
Eco130I CCWWGG 1 cut(s) 254
Eco24I GRGCYC 1 cut(s) 771
Eco31I GGTCTC 1 cut(s) 747
Eco32I GATATC 1 cut(s) 430
Eco57I CTGAAG 1 cut(s) 338
EcoRI GAATTC 1 cut(s) 6
EcoRII CCWGG 3 cut(s) 54, 423, 751
EcoRV GATATC 1 cut(s) 430
EcoT14I CCWWGG 1 cut(s) 254
EcoT38I GRGCYC 1 cut(s) 771
ErhI CCWWGG 1 cut(s) 254
FaeI CATG 8 cut(s) 23, 258, 272, 394, 605, 618, 821, 830
FaqI GGGAC 2 cut(s) 431, 734
FatI CATG 8 cut(s) 19, 254, 268, 390, 601, 614, 817, 826
FauI CCCGC 2 cut(s) 372, 674
Fnu4HI GCNGC 2 cut(s) 679, 803
FokI GGATG 3 cut(s) 539, 647, 653
FriOI GRGCYC 1 cut(s) 771
Fsp4HI GCNGC 2 cut(s) 679, 803
FspBI CTAG 3 cut(s) 663, 672, 705
GluI GCNGC 2 cut(s) 679, 803
GsuI CTGGAG 1 cut(s) 729
HaeIII GGCC 2 cut(s) 54, 625
HapII CCGG 5 cut(s) 275, 308, 368, 626, 845
HgaI GACGC 1 cut(s) 324
Hin1I GRCGYC 1 cut(s) 335
Hin1II CATG 8 cut(s) 23, 258, 272, 394, 605, 618, 821, 830
HincII GTYRAC 1 cut(s) 657
HindII GTYRAC 1 cut(s) 657
HindIII AAGCTT 1 cut(s) 563
HinfI GANTC 1 cut(s) 387
HpaII CCGG 5 cut(s) 275, 308, 368, 626, 845
Hpy166II GTNNAC 1 cut(s) 657
Hpy188I TCNGA 5 cut(s) 217, 237, 377, 464, 792
Hpy188III TCNNGA 6 cut(s) 115, 391, 454, 827, 845, 875
Hpy8I GTNNAC 1 cut(s) 657
Hpy99I CGWCG 1 cut(s) 340
HpyAV CCTTC 5 cut(s) 362, 442, 735, 833, 842
HpyCH4III ACNGT 4 cut(s) 587, 612, 650, 835
HpyCH4V TGCA 4 cut(s) 19, 172, 546, 817
HpyF10VI GCNNNNNNNGC 9 cut(s) 199, 208, 250, 278, 490, 505, 571, 802, 882
HpyF3I CTNAG 3 cut(s) 485, 854, 900
Hsp92I GRCGYC 1 cut(s) 335
Hsp92II CATG 8 cut(s) 23, 258, 272, 394, 605, 618, 821, 830
Kpn2I TCCGGA 1 cut(s) 844
KroI GCCGGC 1 cut(s) 367
KroNI GCCGGC 1 cut(s) 369
Kzo9I GATC 3 cut(s) 117, 217, 360
LguI GCTCTTC 1 cut(s) 209
LmnI GCTCC 4 cut(s) 164, 190, 277, 465
Lsp1109I GCAGC 2 cut(s) 690, 814
LweI GCATC 2 cut(s) 309, 533
MaeI CTAG 3 cut(s) 663, 672, 705
MaeIII GTNAC 1 cut(s) 595
MalI GATC 3 cut(s) 119, 219, 362
MboI GATC 3 cut(s) 117, 217, 360
MboII GAAGA 3 cut(s) 73, 196, 890
MflI RGATCY 2 cut(s) 217, 360
MhlI GDGCHC 4 cut(s) 204, 581, 725, 771
MluCI AATT 3 cut(s) 6, 465, 477
MlyI GAGTC 1 cut(s) 396
MmeI TCCRAC 1 cut(s) 817
MreI CGCCGGCG 1 cut(s) 367
MroI TCCGGA 1 cut(s) 844
MroNI GCCGGC 1 cut(s) 367
MroXI GAANNNNTTC 1 cut(s) 318
MseI TTAA 1 cut(s) 159
MslI CAYNNNNRTG 2 cut(s) 134, 395
MspA1I CMGCKG 1 cut(s) 681
MspI CCGG 5 cut(s) 275, 308, 368, 626, 845
MspR9I CCNGG 3 cut(s) 56, 425, 753
MvaI CCWGG 3 cut(s) 56, 425, 753
MvnI CGCG 1 cut(s) 876
MwoI GCNNNNNNNGC 9 cut(s) 199, 208, 250, 278, 490, 505, 571, 802, 882
NaeI GCCGGC 1 cut(s) 369
NcoI CCATGG 1 cut(s) 254
NdeII GATC 3 cut(s) 117, 217, 360
NgoMIV GCCGGC 1 cut(s) 367
NlaIII CATG 8 cut(s) 23, 258, 272, 394, 605, 618, 821, 830
NlaIV GGNNCC 1 cut(s) 362
NruI TCGCGA 1 cut(s) 876
NspI RCATGY 1 cut(s) 23
PagI TCATGA 2 cut(s) 390, 826
PaqCI CACCTGC 2 cut(s) 163, 796
PciSI GCTCTTC 1 cut(s) 209
PcsI WCGNNNNNNNCGW 1 cut(s) 241
PdiI GCCGGC 1 cut(s) 369
PdmI GAANNNNTTC 1 cut(s) 318
PflMI CCANNNNNTGG 1 cut(s) 752
PfoI TCCNGGA 1 cut(s) 423
PinAI ACCGGT 1 cut(s) 307
PkrI GCNGC 2 cut(s) 680, 804
PleI GAGTC 1 cut(s) 395
PpsI GAGTC 1 cut(s) 395
PshBI ATTAAT 1 cut(s) 159
PsiI TTATAA 1 cut(s) 264
Psp6I CCWGG 3 cut(s) 54, 423, 751
PspGI CCWGG 3 cut(s) 54, 423, 751
PspN4I GGNNCC 1 cut(s) 362
PstNI CAGNNNCTG 2 cut(s) 221, 752
PsuI RGATCY 2 cut(s) 217, 360
RruI TCGCGA 1 cut(s) 876
RseI CAYNNNNRTG 2 cut(s) 134, 395
SapI GCTCTTC 1 cut(s) 209
SaqAI TTAA 1 cut(s) 159
SatI GCNGC 2 cut(s) 679, 803
Sau3AI GATC 3 cut(s) 117, 217, 360
SchI GAGTC 1 cut(s) 396
ScrFI CCNGG 3 cut(s) 56, 425, 753
SduI GDGCHC 4 cut(s) 204, 581, 725, 771
SetI ASST 9 cut(s) 177, 250, 453, 462, 534, 567, 810, 825, 874
SfaNI GCATC 2 cut(s) 309, 533
SfcI CTRYAG 1 cut(s) 923
SgrAI CRCCGGYG 1 cut(s) 367
SmiMI CAYNNNNRTG 2 cut(s) 134, 395
SmlI CTYRAG 1 cut(s) 619
SmoI CTYRAG 1 cut(s) 619
Sse9I AATT 3 cut(s) 6, 465, 477
SsiI CCGC 3 cut(s) 365, 482, 681
SspMI CTAG 3 cut(s) 663, 672, 705
StyD4I CCNGG 3 cut(s) 54, 423, 751
StyI CCWWGG 1 cut(s) 254
TaaI ACNGT 4 cut(s) 587, 612, 650, 835
TaqI TCGA 3 cut(s) 432, 541, 868
TaqII GACCGA 1 cut(s) 729
TasI AATT 3 cut(s) 6, 465, 477
Tru1I TTAA 1 cut(s) 159
Tru9I TTAA 1 cut(s) 159
TscAI CASTG 2 cut(s) 581, 673
TseI GCWGC 2 cut(s) 678, 802
TspDTI ATGAA 3 cut(s) 118, 815, 843
TspRI CASTG 2 cut(s) 581, 673
Van91I CCANNNNNTGG 1 cut(s) 752
VspI ATTAAT 1 cut(s) 159
XapI RAATTY 2 cut(s) 6, 477
XceI RCATGY 1 cut(s) 23
XcmI CCANNNNNNNNNTGG 1 cut(s) 507
XmnI GAANNNNTTC 1 cut(s) 318
XspI CTAG 3 cut(s) 663, 672, 705
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.