Rmu_sc0001455.1_g000005

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001455.1
OG0000187
Physical Location & Seq
Reverse (-)
28368 .. 30569
2202 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001455.1_g000005.1.cds

Sequence Viewer

Length: 1245 bp
atgagctctgttgatgccatggctgctagattagccacctctcttgctattgctgaaggtaagaggcagattgatttgcgcccaactcagggccaaggtttgcgacaagcaaacgtgttcttggtgggcaaacttttcacagttcgtgactacaagatcaagccattcatggggatgtttcgcaacgcctggaggataaatggagcattgccagtggaggaagcggaggagcagagggtgctcttcaagttgtcggaccctgcagatcatgttcgggtctggcgtggtgcgccatggggctataaccatgctctagtggcgttggcgtggtatgatggcatcatgccggttgcaaaggttcccctgaccacgacgtcctactggatcaccctccaggagatcccgcaggtgttccgggaattttcaggagatcgacaagaatgccaagaaggccgggtagcttcgaattatggaccggctttggatgaggatgatgatgatgctgagtggactgtgttgggatcccagggtttggcttcaaaggcaaatgggggtggtatgccaatgcaggggagtgtatgggcatcatcttctagcaccacaagcactggtggggctcttactggtatgagggctagggtttcttccccgtgcccatctttggtgtttctgaccccaatgcctggaccaggccgcgagccctctttgagtgccttgtttttgaagcaaaagagacaggtgatggtgcgtgacctccagaaaaccgtcggaactccagagcgcctcaatggcaaacgttgtggaaatgaagatggcttgaccgtatcccctaagaagttgaaactgagcttggctgtgggtaagagaaacctcattttggattctgaaaatcttgggttggatccagtcttacaggtagagtccagttctggtagcatgaagaagaagagaggaagatctacgggtagtaagaataattcatcttctagtgacaaggctatgacctcaaagcatgaggagggccatgggcagcacaagtctcccaacaggaagcagtatgacgagctcttcgacgaggtcttgggtgaggatggtttggacgatggccatggagacgttaccagcgccgatgacggagtctggcggttggatgaggagggcggggcggcgccttggatgagtatgcaccacatagacacacatatgattgtctcattgctcttgattccttcttcattcatttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

414

Amino Acids

45.17

Weight (kDa)

6.53

Isoelectric Point (pI)

46.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000187)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20170 FvH4_4g06831
rosa_chinensis RchiOBHm_Chr1g0321991 RchiOBHm_Chr2g0161811
rosa_laevigata RLG00000015375 RLG00000018377
rosa_multiflora Rmu_co8011754.1_g000001 Rmu_co8019986.1_g000001 Rmu_co8067766.1_g000001 Rmu_co8156128.1_g000001 Rmu_co8219154.1_g000003 Rmu_co8297235.1_g000001 Rmu_co8345223.1_g000001 Rmu_co8364775.1_g000001 Rmu_co8465075.1_g000001 Rmu_sc0000007.1_g000002 Rmu_sc0000054.1_g000015 Rmu_sc0000054.1_g000023 Rmu_sc0000145.1_g000010 Rmu_sc0000166.1_g000006 Rmu_sc0000218.1_g000012 Rmu_sc0000339.1_g000008 Rmu_sc0000342.1_g000015 Rmu_sc0000464.1_g000008 Rmu_sc0000620.1_g000003 Rmu_sc0000638.1_g000017 Rmu_sc0000890.1_g000007 Rmu_sc0000894.1_g000024 Rmu_sc0000909.1_g000010 Rmu_sc0000928.1_g000020 Rmu_sc0000977.1_g000007 Rmu_sc0001022.1_g000003 Rmu_sc0001035.1_g000037 Rmu_sc0001060.1_g000008 Rmu_sc0001168.1_g000005 Rmu_sc0001173.1_g000022 Rmu_sc0001179.1_g000016 Rmu_sc0001408.1_g000003 Rmu_sc0001455.1_g000005 Rmu_sc0001484.1_g000008 Rmu_sc0001585.1_g000010 Rmu_sc0001702.1_g000030 Rmu_sc0001755.1_g000063 Rmu_sc0001903.1_g000009 Rmu_sc0002099.1_g000001 Rmu_sc0002142.1_g000012 Rmu_sc0002158.1_g000014 Rmu_sc0002307.1_g000009 Rmu_sc0002358.1_g000013 Rmu_sc0002421.1_g000002 Rmu_sc0002426.1_g000003 Rmu_sc0002438.1_g000001 Rmu_sc0002461.1_g000001 Rmu_sc0002508.1_g000003 Rmu_sc0002532.1_g000056 Rmu_sc0002583.1_g000002 Rmu_sc0002927.1_g000033 Rmu_sc0003033.1_g000040 Rmu_sc0003271.1_g000006 Rmu_sc0003381.1_g000006 Rmu_sc0003507.1_g000007 Rmu_sc0003578.1_g000003 Rmu_sc0003693.1_g000004 Rmu_sc0003693.1_g000005 Rmu_sc0003704.1_g000003 Rmu_sc0003840.1_g000002 Rmu_sc0004084.1_g000026 Rmu_sc0004193.1_g000007 Rmu_sc0004234.1_g000033 Rmu_sc0004235.1_g000025 Rmu_sc0004435.1_g000006 Rmu_sc0004727.1_g000003 Rmu_sc0004741.1_g000001 Rmu_sc0004926.1_g000004 Rmu_sc0005365.1_g000001 Rmu_sc0005392.1_g000007 Rmu_sc0005415.1_g000001 Rmu_sc0005539.1_g000007 Rmu_sc0005708.1_g000017 Rmu_sc0006317.1_g000007 Rmu_sc0006453.1_g000054 Rmu_sc0006536.1_g000004 Rmu_sc0006740.1_g000022 Rmu_sc0006763.1_g000012 Rmu_sc0007115.1_g000002 Rmu_sc0007115.1_g000010 Rmu_sc0007129.1_g000017 Rmu_sc0007131.1_g000010 Rmu_sc0008373.1_g000008 Rmu_sc0009005.1_g000008 Rmu_sc0009252.1_g000007 Rmu_sc0009599.1_g000022 Rmu_sc0009785.1_g000027 Rmu_sc0009891.1_g000003 Rmu_sc0010099.1_g000010 Rmu_sc0010266.1_g000008 Rmu_sc0010334.1_g000003 Rmu_sc0010381.1_g000001 Rmu_sc0010496.1_g000003 Rmu_sc0010496.1_g000004 Rmu_sc0010546.1_g000003 Rmu_sc0011482.1_g000006 Rmu_sc0011875.1_g000010 Rmu_sc0011917.1_g000006 Rmu_sc0012293.1_g000004 Rmu_sc0012847.1_g000003 Rmu_sc0013773.1_g000001 Rmu_sc0016060.1_g000003 Rmu_sc0016170.1_g000013 Rmu_sc0016393.1_g000002 Rmu_sc0017589.1_g000001 Rmu_sc0017786.1_g000005 Rmu_sc0018326.1_g000002 Rmu_sc0020760.1_g000001 Rmu_sc0021262.1_g000003 Rmu_sc0023851.1_g000002 Rmu_sc0024044.1_g000001 Rmu_sc0026820.1_g000001 Rmu_sc0032306.1_g000001 Rmu_sc0035666.1_g000001 Rmu_sc0036881.1_g000001 Rmu_sc0037030.1_g000001 Rmu_sc0037158.1_g000001 Rmu_ssc0000016.1_g000002 Rmu_ssc0000044.1_g000012 Rmu_ssc0000044.1_g000014 Rmu_ssc0000050.1_g000064 Rmu_ssc0000064.1_g000022 Rmu_ssc0000154.1_g000037 Rmu_ssc0000178.1_g000013 Rmu_ssc0000217.1_g000022 Rmu_ssc0000392.1_g000004
rosa_roxburghii Rroxscaffold_3G00242000 Rroxscaffold_3G00242530 Rroxscaffold_6G00406010
rosa_rugosa Rorug01G0062000 Rorug02G0224000 Rorug02G0262900 Rorug02G0263000 Rorug02G0358900 Rorug02G0360500 Rorug02G0378500.1 Rorug02G0378600 Rorug02G0394700 Rorug03G0122900 Rorug03G0254600 Rorug03G0254700 Rorug03G0254800 Rorug04G0042200.1 Rorug04G0378100 Rorug05G0053400 Rorug05G0238600 Rorug05G0364500 Rorug05G0562000 Rorug06G0089300 Rorug06G0089400 Rorug06G0145700 Rorug07G0111600 Rorug07G0229500.1 Rorug07G0287600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 397
AasI GACNNNNNNGTC 1 cut(s) 373
AatII GACGTC 1 cut(s) 377
Acc36I ACCTGC 1 cut(s) 397
AccB1I GGYRCC 1 cut(s) 1168
AccB7I CCANNNNNTGG 2 cut(s) 532, 683
AccII CGCG 1 cut(s) 696
AciI CCGC 6 cut(s) 224, 404, 694, 1144, 1161, 1166
AclI AACGTT 1 cut(s) 796
AclWI GGATC 6 cut(s) 392, 394, 516, 529, 896, 909
AcoI YGGCCR 1 cut(s) 1105
AcsI RAATTY 1 cut(s) 419
AcuI CTGAAG 1 cut(s) 75
AcyI GRCGYC 2 cut(s) 374, 1169
AfiI CCNNNNNNNGG 9 cut(s) 88, 89, 170, 532, 569, 661, 683, 689, 877
AflIII ACRYGT 1 cut(s) 114
AgsI TTSAA 4 cut(s) 247, 540, 724, 841
AjnI CCWGG 5 cut(s) 188, 393, 525, 682, 688
AjuI GAANNNNNNNTTGG 2 cut(s) 833, 865
AluBI AGCT 4 cut(s) 6, 461, 849, 1066
AluI AGCT 4 cut(s) 6, 461, 849, 1066
Alw21I GWGCWC 3 cut(s) 8, 243, 1068
Alw26I GTCTC 4 cut(s) 727, 1044, 1107, 1216
AlwI GGATC 6 cut(s) 392, 394, 516, 529, 896, 909
AoxI GGCC 5 cut(s) 91, 451, 691, 1021, 1105
ApeKI GCWGC 2 cut(s) 23, 1030
ApoI RAATTY 1 cut(s) 419
ArsI GACNNNNNNTTYG 2 cut(s) 1052, 1084
AspLEI GCGC 5 cut(s) 81, 292, 783, 1127, 1171
AspS9I GGNCC 5 cut(s) 91, 256, 473, 686, 1021
AsuC2I CCSGG 2 cut(s) 416, 455
AsuHPI GGTGA 3 cut(s) 379, 751, 1097
AsuII TTCGAA 1 cut(s) 464
AvaII GGWCC 3 cut(s) 256, 473, 686
BaeGI GKGCMC 1 cut(s) 656
BalI TGGCCA 1 cut(s) 1107
BamHI GGATCC 2 cut(s) 521, 901
BanI GGYRCC 1 cut(s) 1168
BanII GRGCYC 4 cut(s) 8, 619, 702, 1068
Bbv12I GWGCWC 3 cut(s) 8, 243, 1068
BbvI GCAGC 2 cut(s) 10, 1042
BccI CCATC 6 cut(s) 329, 664, 736, 806, 1085, 1097
BcgI CGANNNNNNTGC 2 cut(s) 423, 457
BciT130I CCWGG 5 cut(s) 190, 395, 527, 684, 690
BciVI GTATCC 1 cut(s) 835
BcnI CCSGG 2 cut(s) 416, 455
BcoDI GTCTC 4 cut(s) 727, 1044, 1107, 1216
BfaI CTAG 5 cut(s) 27, 314, 594, 636, 987
BfmI CTRYAG 1 cut(s) 261
BfoI RGCGCY 3 cut(s) 784, 1128, 1172
BfuAI ACCTGC 1 cut(s) 397
BfuI GTATCC 1 cut(s) 835
BglI GCCNNNNNGGC 2 cut(s) 450, 789
BglII AGATCT 1 cut(s) 956
BisI GCNGC 4 cut(s) 24, 694, 1031, 1167
BlsI GCNGC 4 cut(s) 25, 695, 1032, 1168
Bme1390I CCNGG 7 cut(s) 190, 395, 416, 455, 527, 684, 690
Bme18I GGWCC 3 cut(s) 256, 473, 686
BmgT120I GGNCC 5 cut(s) 91, 256, 473, 686, 1021
BmiI GGNNCC 5 cut(s) 258, 360, 523, 903, 1170
BmrFI CCNGG 7 cut(s) 190, 395, 416, 455, 527, 684, 690
BmsI GCATC 4 cut(s) 4, 348, 490, 593
BpmI CTGGAG 4 cut(s) 211, 377, 740, 759
Bpu14I TTCGAA 1 cut(s) 464
BpuMI CCSGG 2 cut(s) 416, 455
BsaHI GRCGYC 2 cut(s) 374, 1169
BsaJI CCNNGG 8 cut(s) 18, 94, 293, 525, 526, 1024, 1108, 1172
Bsc4I CCNNNNNNNGG 9 cut(s) 88, 89, 170, 532, 569, 661, 683, 689, 877
Bse118I RCCGGY 2 cut(s) 346, 475
Bse1I ACTGG 6 cut(s) 212, 386, 613, 628, 905, 924
Bse3DI GCAATG 2 cut(s) 206, 1214
BseBI CCWGG 5 cut(s) 190, 395, 527, 684, 690
BseDI CCNNGG 8 cut(s) 18, 94, 293, 525, 526, 1024, 1108, 1172
BseGI GGATG 6 cut(s) 180, 490, 496, 1096, 1156, 1182
BseLI CCNNNNNNNGG 9 cut(s) 88, 89, 170, 532, 569, 661, 683, 689, 877
BseMI GCAATG 2 cut(s) 206, 1214
BseMII CTCAG 3 cut(s) 101, 495, 836
BseNI ACTGG 6 cut(s) 212, 386, 613, 628, 905, 924
BseRI GAGGAG 3 cut(s) 242, 1031, 1169
BseSI GKGCMC 1 cut(s) 656
BseXI GCAGC 2 cut(s) 10, 1042
Bsh1236I CGCG 1 cut(s) 696
BshFI GGCC 5 cut(s) 93, 453, 693, 1023, 1107
BshNI GGYRCC 1 cut(s) 1168
BsiHKAI GWGCWC 3 cut(s) 8, 243, 1068
BsiSI CCGG 4 cut(s) 347, 415, 454, 476
BslI CCNNNNNNNGG 9 cut(s) 88, 89, 170, 532, 569, 661, 683, 689, 877
BsmAI GTCTC 4 cut(s) 727, 1044, 1107, 1216
BsmBI CGTCTC 1 cut(s) 1107
BsmI GAATGC 1 cut(s) 446
BsnI GGCC 5 cut(s) 93, 453, 693, 1023, 1107
Bsp119I TTCGAA 1 cut(s) 464
Bsp1286I GDGCHC 6 cut(s) 8, 243, 619, 656, 702, 1068
Bsp143I GATC 8 cut(s) 156, 265, 384, 399, 430, 521, 901, 956
Bsp19I CCATGG 4 cut(s) 18, 293, 1024, 1108
BspACI CCGC 6 cut(s) 224, 404, 694, 1144, 1161, 1166
BspANI GGCC 5 cut(s) 93, 453, 693, 1023, 1107
BspCNI CTCAG 3 cut(s) 100, 496, 837
BspFNI CGCG 1 cut(s) 696
BspLI GGNNCC 5 cut(s) 258, 360, 523, 903, 1170
BspMAI CTGCAG 1 cut(s) 265
BspMI ACCTGC 1 cut(s) 397
BspPI GGATC 6 cut(s) 392, 394, 516, 529, 896, 909
BspQI GCTCTTC 2 cut(s) 248, 1073
BspT104I TTCGAA 1 cut(s) 464
BspT107I GGYRCC 1 cut(s) 1168
BsrDI GCAATG 2 cut(s) 206, 1214
BsrFI RCCGGY 2 cut(s) 346, 475
BsrI ACTGG 6 cut(s) 212, 386, 613, 628, 905, 924
BssAI RCCGGY 2 cut(s) 346, 475
BssECI CCNNGG 8 cut(s) 18, 94, 293, 525, 526, 1024, 1108, 1172
BssMI GATC 8 cut(s) 156, 265, 384, 399, 430, 521, 901, 956
BssNI GRCGYC 2 cut(s) 374, 1169
BssT1I CCWWGG 6 cut(s) 18, 94, 293, 1024, 1108, 1172
Bst2UI CCWGG 5 cut(s) 190, 395, 527, 684, 690
Bst4CI ACNGT 4 cut(s) 142, 514, 766, 823
Bst6I CTCTTC 3 cut(s) 248, 941, 1073
BstACI GRCGYC 2 cut(s) 374, 1169
BstAPI GCANNNNNTGC 1 cut(s) 238
BstBI TTCGAA 1 cut(s) 464
BstC8I GCNNGC 1 cut(s) 698
BstDEI CTNAG 4 cut(s) 87, 504, 831, 845
BstDSI CCRYGG 4 cut(s) 18, 293, 1024, 1108
BstENI CCTNNNNNAGG 1 cut(s) 687
BstF5I GGATG 6 cut(s) 180, 490, 496, 1096, 1156, 1182
BstFNI CGCG 1 cut(s) 696
BstH2I RGCGCY 3 cut(s) 784, 1128, 1172
BstHHI GCGC 5 cut(s) 81, 292, 783, 1127, 1171
BstKTI GATC 8 cut(s) 159, 268, 387, 402, 433, 524, 904, 959
BstMAI GTCTC 4 cut(s) 727, 1044, 1107, 1216
BstMBI GATC 8 cut(s) 156, 265, 384, 399, 430, 521, 901, 956
BstMWI GCNNNNNNNGC 9 cut(s) 23, 32, 238, 289, 317, 450, 542, 603, 789
BstNI CCWGG 5 cut(s) 190, 395, 527, 684, 690
BstSCI CCNGG 7 cut(s) 188, 393, 414, 453, 525, 682, 688
BstSFI CTRYAG 1 cut(s) 261
BstSLI GKGCMC 1 cut(s) 656
BstUI CGCG 1 cut(s) 696
BstV1I GCAGC 2 cut(s) 10, 1042
BstX2I RGATCY 4 cut(s) 399, 521, 901, 956
BstYI RGATCY 4 cut(s) 399, 521, 901, 956
BsuI GTATCC 1 cut(s) 835
BsuRI GGCC 5 cut(s) 93, 453, 693, 1023, 1107
BtgI CCRYGG 4 cut(s) 18, 293, 1024, 1108
BtsCI GGATG 6 cut(s) 180, 490, 496, 1096, 1156, 1182
BtsIMutI CAGTG 2 cut(s) 219, 606
BveI ACCTGC 1 cut(s) 397
Cac8I GCNNGC 1 cut(s) 698
CfoI GCGC 5 cut(s) 81, 292, 783, 1127, 1171
Cfr10I RCCGGY 2 cut(s) 346, 475
Cfr13I GGNCC 5 cut(s) 91, 256, 473, 686, 1021
CspCI CAANNNNNGTGG 4 cut(s) 25, 60, 781, 816
DdeI CTNAG 4 cut(s) 87, 504, 831, 845
DinI GGCGCC 1 cut(s) 1170
DpnI GATC 8 cut(s) 158, 267, 386, 401, 432, 523, 903, 958
DpnII GATC 8 cut(s) 156, 265, 384, 399, 430, 521, 901, 956
DrdI GACNNNNNNGTC 1 cut(s) 373
DseDI GACNNNNNNGTC 1 cut(s) 373
EaeI YGGCCR 1 cut(s) 1105
Eam1104I CTCTTC 3 cut(s) 248, 941, 1073
EarI CTCTTC 3 cut(s) 248, 941, 1073
Ecl136II GAGCTC 2 cut(s) 6, 1066
Eco130I CCWWGG 6 cut(s) 18, 94, 293, 1024, 1108, 1172
Eco24I GRGCYC 4 cut(s) 8, 619, 702, 1068
Eco47I GGWCC 3 cut(s) 256, 473, 686
Eco53kI GAGCTC 2 cut(s) 6, 1066
Eco57I CTGAAG 1 cut(s) 75
EcoICRI GAGCTC 2 cut(s) 6, 1066
EcoNI CCTNNNNNAGG 1 cut(s) 687
EcoRII CCWGG 5 cut(s) 188, 393, 525, 682, 688
EcoT14I CCWWGG 6 cut(s) 18, 94, 293, 1024, 1108, 1172
EcoT38I GRGCYC 4 cut(s) 8, 619, 702, 1068
EgeI GGCGCC 1 cut(s) 1170
EheI GGCGCC 1 cut(s) 1170
ErhI CCWWGG 6 cut(s) 18, 94, 293, 1024, 1108, 1172
Esp3I CGTCTC 1 cut(s) 1107
FauI CCCGC 2 cut(s) 411, 1154
FauNDI CATATG 1 cut(s) 1203
Fnu4HI GCNGC 4 cut(s) 24, 694, 1031, 1167
FokI GGATG 6 cut(s) 187, 497, 503, 1103, 1163, 1189
FriOI GRGCYC 4 cut(s) 8, 619, 702, 1068
Fsp4HI GCNGC 4 cut(s) 24, 694, 1031, 1167
FspBI CTAG 5 cut(s) 27, 314, 594, 636, 987
GlaI GCGC 5 cut(s) 80, 291, 782, 1126, 1170
GluI GCNGC 4 cut(s) 24, 694, 1031, 1167
GsuI CTGGAG 4 cut(s) 211, 377, 740, 759
HaeII RGCGCY 3 cut(s) 784, 1128, 1172
HaeIII GGCC 5 cut(s) 93, 453, 693, 1023, 1107
HapII CCGG 4 cut(s) 347, 415, 454, 476
HhaI GCGC 5 cut(s) 81, 292, 783, 1127, 1171
Hin1I GRCGYC 2 cut(s) 374, 1169
Hin6I GCGC 5 cut(s) 79, 290, 781, 1125, 1169
HinP1I GCGC 5 cut(s) 79, 290, 781, 1125, 1169
HinfI GANTC 4 cut(s) 881, 920, 1137, 1225
HpaII CCGG 4 cut(s) 347, 415, 454, 476
HphI GGTGA 3 cut(s) 379, 751, 1097
Hpy166II GTNNAC 1 cut(s) 510
Hpy188I TCNGA 4 cut(s) 256, 672, 770, 886
Hpy188III TCNNGA 5 cut(s) 146, 426, 757, 776, 1222
Hpy8I GTNNAC 1 cut(s) 510
Hpy99I CGWCG 3 cut(s) 376, 770, 1076
HpyAV CCTTC 3 cut(s) 50, 443, 1239
HpyCH4III ACNGT 4 cut(s) 142, 514, 766, 823
HpyCH4IV ACGT 4 cut(s) 114, 374, 796, 1116
HpyCH4V TGCA 4 cut(s) 263, 353, 568, 1186
HpyF10VI GCNNNNNNNGC 9 cut(s) 23, 32, 238, 289, 317, 450, 542, 603, 789
HpyF3I CTNAG 4 cut(s) 87, 504, 831, 845
HpySE526I ACGT 4 cut(s) 114, 374, 796, 1116
Hsp92I GRCGYC 2 cut(s) 374, 1169
HspAI GCGC 5 cut(s) 79, 290, 781, 1125, 1169
KasI GGCGCC 1 cut(s) 1168
Kzo9I GATC 8 cut(s) 156, 265, 384, 399, 430, 521, 901, 956
LguI GCTCTTC 2 cut(s) 248, 1073
LmnI GCTCC 2 cut(s) 203, 229
Lsp1109I GCAGC 2 cut(s) 10, 1042
LweI GCATC 4 cut(s) 4, 348, 490, 593
MaeI CTAG 5 cut(s) 27, 314, 594, 636, 987
MaeII ACGT 4 cut(s) 114, 374, 796, 1116
MaeIII GTNAC 4 cut(s) 146, 749, 989, 1117
MalI GATC 8 cut(s) 158, 267, 386, 401, 432, 523, 903, 958
MboI GATC 8 cut(s) 156, 265, 384, 399, 430, 521, 901, 956
MflI RGATCY 4 cut(s) 399, 521, 901, 956
MhlI GDGCHC 6 cut(s) 8, 243, 619, 656, 702, 1068
MlsI TGGCCA 1 cut(s) 1107
MluCI AATT 3 cut(s) 419, 466, 976
MluNI TGGCCA 1 cut(s) 1107
Mly113I GGCGCC 1 cut(s) 1169
MlyI GAGTC 2 cut(s) 929, 1146
MmeI TCCRAC 4 cut(s) 234, 748, 879, 1128
Mox20I TGGCCA 1 cut(s) 1107
MscI TGGCCA 1 cut(s) 1107
MseI TTAA 1 cut(s) 1243
MslI CAYNNNNRTG 2 cut(s) 173, 1202
Msp20I TGGCCA 1 cut(s) 1107
MspI CCGG 4 cut(s) 347, 415, 454, 476
MspR9I CCNGG 7 cut(s) 190, 395, 416, 455, 527, 684, 690
Mva1269I GAATGC 1 cut(s) 446
MvaI CCWGG 5 cut(s) 190, 395, 527, 684, 690
MvnI CGCG 1 cut(s) 696
MwoI GCNNNNNNNGC 9 cut(s) 23, 32, 238, 289, 317, 450, 542, 603, 789
NarI GGCGCC 1 cut(s) 1169
NciI CCSGG 2 cut(s) 416, 455
NcoI CCATGG 4 cut(s) 18, 293, 1024, 1108
NdeI CATATG 1 cut(s) 1203
NdeII GATC 8 cut(s) 156, 265, 384, 399, 430, 521, 901, 956
NlaIV GGNNCC 5 cut(s) 258, 360, 523, 903, 1170
NmuCI GTSAC 3 cut(s) 146, 749, 989
NspV TTCGAA 1 cut(s) 464
PaqCI CACCTGC 1 cut(s) 397
PasI CCCWGGG 1 cut(s) 526
PciSI GCTCTTC 2 cut(s) 248, 1073
PcsI WCGNNNNNNNCGW 2 cut(s) 280, 1068
PctI GAATGC 1 cut(s) 446
PfeI GAWTC 2 cut(s) 881, 1225
PflFI GACNNNGTC 2 cut(s) 1076, 1136
PflMI CCANNNNNTGG 2 cut(s) 532, 683
PfoI TCCNGGA 2 cut(s) 393, 414
PkrI GCNGC 4 cut(s) 25, 695, 1032, 1168
PleI GAGTC 2 cut(s) 928, 1145
PluTI GGCGCC 1 cut(s) 1172
PpsI GAGTC 2 cut(s) 928, 1145
Psp124BI GAGCTC 2 cut(s) 8, 1068
Psp1406I AACGTT 1 cut(s) 796
Psp6I CCWGG 5 cut(s) 188, 393, 525, 682, 688
PspGI CCWGG 5 cut(s) 188, 393, 525, 682, 688
PspN4I GGNNCC 5 cut(s) 258, 360, 523, 903, 1170
PspPI GGNCC 5 cut(s) 91, 256, 473, 686, 1021
PstI CTGCAG 1 cut(s) 265
PsuI RGATCY 4 cut(s) 399, 521, 901, 956
PsyI GACNNNGTC 2 cut(s) 1076, 1136
RseI CAYNNNNRTG 2 cut(s) 173, 1202
SacI GAGCTC 2 cut(s) 8, 1068
SapI GCTCTTC 2 cut(s) 248, 1073
SaqAI TTAA 1 cut(s) 1243
SatI GCNGC 4 cut(s) 24, 694, 1031, 1167
Sau3AI GATC 8 cut(s) 156, 265, 384, 399, 430, 521, 901, 956
Sau96I GGNCC 5 cut(s) 91, 256, 473, 686, 1021
SchI GAGTC 2 cut(s) 929, 1146
ScrFI CCNGG 7 cut(s) 190, 395, 416, 455, 527, 684, 690
SduI GDGCHC 6 cut(s) 8, 243, 619, 656, 702, 1068
SfaNI GCATC 4 cut(s) 4, 348, 490, 593
SfcI CTRYAG 1 cut(s) 261
SfoI GGCGCC 1 cut(s) 1170
SfuI TTCGAA 1 cut(s) 464
SinI GGWCC 3 cut(s) 256, 473, 686
SmiMI CAYNNNNRTG 2 cut(s) 173, 1202
Sse9I AATT 3 cut(s) 419, 466, 976
SsiI CCGC 6 cut(s) 224, 404, 694, 1144, 1161, 1166
SspDI GGCGCC 1 cut(s) 1168
SspMI CTAG 5 cut(s) 27, 314, 594, 636, 987
SstI GAGCTC 2 cut(s) 8, 1068
StyD4I CCNGG 7 cut(s) 188, 393, 414, 453, 525, 682, 688
StyI CCWWGG 6 cut(s) 18, 94, 293, 1024, 1108, 1172
TaaI ACNGT 4 cut(s) 142, 514, 766, 823
TaiI ACGT 4 cut(s) 117, 377, 799, 1119
TaqI TCGA 3 cut(s) 433, 464, 1071
TasI AATT 3 cut(s) 419, 466, 976
TauI GCSGC 2 cut(s) 696, 1169
TfiI GAWTC 2 cut(s) 881, 1225
Tru1I TTAA 1 cut(s) 1243
Tru9I TTAA 1 cut(s) 1243
TscAI CASTG 2 cut(s) 219, 613
TseFI GTSAC 3 cut(s) 146, 749, 989
TseI GCWGC 2 cut(s) 23, 1030
Tsp45I GTSAC 3 cut(s) 146, 749, 989
TspDTI ATGAA 6 cut(s) 157, 822, 953, 969, 1224, 1228
TspGWI ACGGA 1 cut(s) 1149
TspRI CASTG 2 cut(s) 219, 613
Tth111I GACNNNGTC 2 cut(s) 1076, 1136
Van91I CCANNNNNTGG 2 cut(s) 532, 683
VpaK11BI GGWCC 3 cut(s) 256, 473, 686
XagI CCTNNNNNAGG 1 cut(s) 687
XapI RAATTY 1 cut(s) 419
XspI CTAG 5 cut(s) 27, 314, 594, 636, 987
ZraI GACGTC 1 cut(s) 375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.