Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002158.1

Orthogroup ID

OG0000187

Physical Location & Seq

Genomic Coordinates Forward (+)

66373 .. 67678

Gene Structure 1306 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002158.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1104 bp

atgagttccgttgatgccatggccgcaaggctagcttcatctctcgtgattgctaaaggaaagaaacagattgacctccgtcctatgcaaggtcagggtttgtgtcagtcggaggttttcatggtggggaagttgctcactgctcgggattataagatccgatccttccttgggatgttccgcaatgcttggcggatcaatggatccctgcgtgtagaggagacggacggtcagagggttctgttcactttgtcggatcattcggatcgagttcgtatctggaaggaccccccgtgggggtacaatcatgcaccggtggcgctggcatgttatgatggtgtgacgcccgtggaaaaggtggaagacgaggttgaattcctttgcaaattcaagtatgacaaattgtttggccggtactccatctgtggattggtgacacatgtaggcttgccttgctcggggccgacattggaggaggatgatgacgaggctgagaggacggtgttgggatggcaaactgcacctgcaccgccggtgactttgactggaggtatgcagatgcatccaggagcttcagcttcgagttcggggacgaagggaggccgcagctcggttttgaatgctagggttttgattcatggaaaaaccctagtgtttaagacccctatccctcagccgattgtggaacctcctctgagctctttcttgaacaaacctaggcgacaagtggtgatcagagagctccaggaaactgctatgacaccggagagaattaccggtaagcgtagaggtcgatctgaggagggagtgactatctccccaaagaagttaaagcttagcttggctgtaggcaagcgtaatctacatttagagccagaaaacctagggttggtctctttgtgggaggagggaagttctagtagtggaaagaggaagcgaggtcgtccggttgccagtatgaataagctgccatatggggagaaaaagaaaggtgcagcaaatgaggctgggcaagtacagaaggctcccaagacgaataaggtgaagactacatctgctggtatgagctccaactcaaaagggaaggagctagttatttactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006979 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0016020 GO:0016491 GO:0016614 GO:0016899 GO:0030054 GO:0030312 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0055114 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BBE FAD_binding_4

Protein Analysis

367

Amino Acids

40.21

Weight (kDa)

9.75

Isoelectric Point (pI)

45.73

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000187)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g20170 FvH4_4g06831
rosa_chinensis	RchiOBHm_Chr1g0321991 RchiOBHm_Chr2g0161811
rosa_laevigata	RLG00000015375 RLG00000018377
rosa_multiflora	Rmu_co8011754.1_g000001 Rmu_co8019986.1_g000001 Rmu_co8067766.1_g000001 Rmu_co8156128.1_g000001 Rmu_co8219154.1_g000003 Rmu_co8297235.1_g000001 Rmu_co8345223.1_g000001 Rmu_co8364775.1_g000001 Rmu_co8465075.1_g000001 Rmu_sc0000007.1_g000002 Rmu_sc0000054.1_g000015 Rmu_sc0000054.1_g000023 Rmu_sc0000145.1_g000010 Rmu_sc0000166.1_g000006 Rmu_sc0000218.1_g000012 Rmu_sc0000339.1_g000008 Rmu_sc0000342.1_g000015 Rmu_sc0000464.1_g000008 Rmu_sc0000620.1_g000003 Rmu_sc0000638.1_g000017 Rmu_sc0000890.1_g000007 Rmu_sc0000894.1_g000024 Rmu_sc0000909.1_g000010 Rmu_sc0000928.1_g000020 Rmu_sc0000977.1_g000007 Rmu_sc0001022.1_g000003 Rmu_sc0001035.1_g000037 Rmu_sc0001060.1_g000008 Rmu_sc0001168.1_g000005 Rmu_sc0001173.1_g000022 Rmu_sc0001179.1_g000016 Rmu_sc0001408.1_g000003 Rmu_sc0001455.1_g000005 Rmu_sc0001484.1_g000008 Rmu_sc0001585.1_g000010 Rmu_sc0001702.1_g000030 Rmu_sc0001755.1_g000063 Rmu_sc0001903.1_g000009 Rmu_sc0002099.1_g000001 Rmu_sc0002142.1_g000012 Rmu_sc0002158.1_g000014 Rmu_sc0002307.1_g000009 Rmu_sc0002358.1_g000013 Rmu_sc0002421.1_g000002 Rmu_sc0002426.1_g000003 Rmu_sc0002438.1_g000001 Rmu_sc0002461.1_g000001 Rmu_sc0002508.1_g000003 Rmu_sc0002532.1_g000056 Rmu_sc0002583.1_g000002 Rmu_sc0002927.1_g000033 Rmu_sc0003033.1_g000040 Rmu_sc0003271.1_g000006 Rmu_sc0003381.1_g000006 Rmu_sc0003507.1_g000007 Rmu_sc0003578.1_g000003 Rmu_sc0003693.1_g000004 Rmu_sc0003693.1_g000005 Rmu_sc0003704.1_g000003 Rmu_sc0003840.1_g000002 Rmu_sc0004084.1_g000026 Rmu_sc0004193.1_g000007 Rmu_sc0004234.1_g000033 Rmu_sc0004235.1_g000025 Rmu_sc0004435.1_g000006 Rmu_sc0004727.1_g000003 Rmu_sc0004741.1_g000001 Rmu_sc0004926.1_g000004 Rmu_sc0005365.1_g000001 Rmu_sc0005392.1_g000007 Rmu_sc0005415.1_g000001 Rmu_sc0005539.1_g000007 Rmu_sc0005708.1_g000017 Rmu_sc0006317.1_g000007 Rmu_sc0006453.1_g000054 Rmu_sc0006536.1_g000004 Rmu_sc0006740.1_g000022 Rmu_sc0006763.1_g000012 Rmu_sc0007115.1_g000002 Rmu_sc0007115.1_g000010 Rmu_sc0007129.1_g000017 Rmu_sc0007131.1_g000010 Rmu_sc0008373.1_g000008 Rmu_sc0009005.1_g000008 Rmu_sc0009252.1_g000007 Rmu_sc0009599.1_g000022 Rmu_sc0009785.1_g000027 Rmu_sc0009891.1_g000003 Rmu_sc0010099.1_g000010 Rmu_sc0010266.1_g000008 Rmu_sc0010334.1_g000003 Rmu_sc0010381.1_g000001 Rmu_sc0010496.1_g000003 Rmu_sc0010496.1_g000004 Rmu_sc0010546.1_g000003 Rmu_sc0011482.1_g000006 Rmu_sc0011875.1_g000010 Rmu_sc0011917.1_g000006 Rmu_sc0012293.1_g000004 Rmu_sc0012847.1_g000003 Rmu_sc0013773.1_g000001 Rmu_sc0016060.1_g000003 Rmu_sc0016170.1_g000013 Rmu_sc0016393.1_g000002 Rmu_sc0017589.1_g000001 Rmu_sc0017786.1_g000005 Rmu_sc0018326.1_g000002 Rmu_sc0020760.1_g000001 Rmu_sc0021262.1_g000003 Rmu_sc0023851.1_g000002 Rmu_sc0024044.1_g000001 Rmu_sc0026820.1_g000001 Rmu_sc0032306.1_g000001 Rmu_sc0035666.1_g000001 Rmu_sc0036881.1_g000001 Rmu_sc0037030.1_g000001 Rmu_sc0037158.1_g000001 Rmu_ssc0000016.1_g000002 Rmu_ssc0000044.1_g000012 Rmu_ssc0000044.1_g000014 Rmu_ssc0000050.1_g000064 Rmu_ssc0000064.1_g000022 Rmu_ssc0000154.1_g000037 Rmu_ssc0000178.1_g000013 Rmu_ssc0000217.1_g000022 Rmu_ssc0000392.1_g000004
rosa_roxburghii	Rroxscaffold_3G00242000 Rroxscaffold_3G00242530 Rroxscaffold_6G00406010
rosa_rugosa	Rorug01G0062000 Rorug02G0224000 Rorug02G0262900 Rorug02G0263000 Rorug02G0358900 Rorug02G0360500 Rorug02G0378500.1 Rorug02G0378600 Rorug02G0394700 Rorug03G0122900 Rorug03G0254600 Rorug03G0254700 Rorug03G0254800 Rorug04G0042200.1 Rorug04G0378100 Rorug05G0053400 Rorug05G0238600 Rorug05G0364500 Rorug05G0562000 Rorug06G0089300 Rorug06G0089400 Rorug06G0145700 Rorug07G0111600 Rorug07G0229500.1 Rorug07G0287600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	153
AarI	CACCTGC	1 cut(s)	532
Acc36I	ACCTGC	1 cut(s)	532
AciI	CCGC	5 cut(s)	24, 181, 193, 530, 604
AclWI	GGATC	7 cut(s)	151, 156, 198, 203, 211, 264, 273
AcoI	YGGCCR	2 cut(s)	21, 409
AcsI	RAATTY	2 cut(s)	374, 386
AcuI	CTGAAG	1 cut(s)	558
AcyI	GRCGYC	1 cut(s)	344
AfaI	GTAC	3 cut(s)	302, 416, 1017
AfiI	CCNNNNNNNGG	8 cut(s)	89, 171, 295, 296, 297, 458, 610, 889
AflIII	ACRYGT	1 cut(s)	439
AgeI	ACCGGT	2 cut(s)	313, 776
AgsI	TTSAA	4 cut(s)	374, 391, 619, 709
AhdI	GACNNNNNGTC	1 cut(s)	228
AjnI	CCWGG	2 cut(s)	565, 744
Alw21I	GWGCWC	3 cut(s)	701, 744, 1070
Alw26I	GTCTC	2 cut(s)	215, 898
AlwI	GGATC	7 cut(s)	151, 156, 198, 203, 211, 264, 273
Ama87I	CYCGRG	2 cut(s)	144, 457
AoxI	GGCC	4 cut(s)	21, 409, 461, 601
ApeKI	GCWGC	3 cut(s)	606, 967, 995
ApoI	RAATTY	2 cut(s)	374, 386
ArsI	GACNNNNNNTTYG	2 cut(s)	389, 421
AsiGI	ACCGGT	2 cut(s)	313, 776
AspA2I	CCTAGG	2 cut(s)	716, 883
AspLEI	GCGC	1 cut(s)	322
AspS9I	GGNCC	2 cut(s)	286, 461
AsuHPI	GGTGA	4 cut(s)	445, 547, 742, 1054
AsuNHI	GCTAGC	1 cut(s)	31
AvaI	CYCGRG	2 cut(s)	144, 457
AvaII	GGWCC	1 cut(s)	286
AvrII	CCTAGG	2 cut(s)	716, 883
BamHI	GGATCC	1 cut(s)	203
BanII	GRGCYC	3 cut(s)	701, 744, 1070
BauI	CACGAG	1 cut(s)	44
BbsI	GAAGAC	2 cut(s)	369, 1052
Bbv12I	GWGCWC	3 cut(s)	701, 744, 1070
BbvCI	CCTCAGC	1 cut(s)	672
BbvI	GCAGC	3 cut(s)	618, 954, 1007
BccI	CCATC	3 cut(s)	329, 428, 504
BciT130I	CCWGG	2 cut(s)	567, 746
BclI	TGATCA	1 cut(s)	732
BcoDI	GTCTC	2 cut(s)	215, 898
BfaI	CTAG	7 cut(s)	32, 624, 650, 717, 884, 918, 1091
BfmI	CTRYAG	1 cut(s)	846
BfoI	RGCGCY	1 cut(s)	323
BfuAI	ACCTGC	1 cut(s)	532
BisI	GCNGC	5 cut(s)	24, 604, 607, 968, 996
BlnI	CCTAGG	2 cut(s)	716, 883
BlpI	GCTNAGC	1 cut(s)	836
BlsI	GCNGC	5 cut(s)	25, 605, 608, 969, 997
Bme1390I	CCNGG	2 cut(s)	567, 746
Bme18I	GGWCC	1 cut(s)	286
BmeRI	GACNNNNNGTC	1 cut(s)	228
BmeT110I	CYCGRG	2 cut(s)	144, 457
BmgT120I	GGNCC	2 cut(s)	286, 461
BmiI	GGNNCC	5 cut(s)	205, 288, 462, 687, 1026
BmrFI	CCNGG	2 cut(s)	567, 746
BmsI	GCATC	3 cut(s)	4, 549, 571
BmtI	GCTAGC	1 cut(s)	35
BoxI	GACNNNNGTC	1 cut(s)	78
BpiI	GAAGAC	2 cut(s)	369, 1052
BpmI	CTGGAG	2 cut(s)	567, 728
Bpu10I	CCTNAGC	1 cut(s)	672
Bpu1102I	GCTNAGC	1 cut(s)	836
BsaHI	GRCGYC	1 cut(s)	344
BsaI	GGTCTC	1 cut(s)	898
BsaJI	CCNNGG	6 cut(s)	18, 169, 293, 348, 716, 883
BsaWI	WCCGGW	4 cut(s)	313, 763, 776, 946
Bsc4I	CCNNNNNNNGG	8 cut(s)	89, 171, 295, 296, 297, 458, 610, 889
Bse118I	RCCGGY	4 cut(s)	313, 411, 532, 776
Bse1I	ACTGG	2 cut(s)	550, 954
Bse3DI	GCAATG	1 cut(s)	190
BseBI	CCWGG	2 cut(s)	567, 746
BseDI	CCNNGG	6 cut(s)	18, 169, 293, 348, 716, 883
BseGI	GGATG	4 cut(s)	180, 484, 515, 562
BseLI	CCNNNNNNNGG	8 cut(s)	89, 171, 295, 296, 297, 458, 610, 889
BseMI	GCAATG	1 cut(s)	190
BseMII	CTCAG	4 cut(s)	483, 686, 686, 789
BseNI	ACTGG	2 cut(s)	550, 954
BseRI	GAGGAG	5 cut(s)	233, 488, 681, 815, 920
BseXI	GCAGC	3 cut(s)	618, 954, 1007
BseYI	CCCAGC	1 cut(s)	1007
BsgI	GTGCAG	3 cut(s)	504, 510, 1014
BshFI	GGCC	4 cut(s)	23, 411, 463, 603
BshTI	ACCGGT	2 cut(s)	313, 776
BsiHKAI	GWGCWC	3 cut(s)	701, 744, 1070
BsiHKCI	CYCGRG	2 cut(s)	144, 457
BsiSI	CCGG	6 cut(s)	314, 412, 533, 764, 777, 947
BslFI	GGGAC	1 cut(s)	604
BslI	CCNNNNNNNGG	8 cut(s)	89, 171, 295, 296, 297, 458, 610, 889
BsmAI	GTCTC	2 cut(s)	215, 898
BsmBI	CGTCTC	1 cut(s)	215
BsmFI	GGGAC	1 cut(s)	604
BsmI	GAATGC	1 cut(s)	625
BsnI	GGCC	4 cut(s)	23, 411, 463, 603
Bso31I	GGTCTC	1 cut(s)	898
BsoBI	CYCGRG	2 cut(s)	144, 457
Bsp1286I	GDGCHC	3 cut(s)	701, 744, 1070
Bsp143I	GATC	8 cut(s)	156, 161, 195, 203, 256, 265, 732, 794
Bsp1720I	GCTNAGC	1 cut(s)	836
Bsp19I	CCATGG	1 cut(s)	18
BspACI	CCGC	5 cut(s)	24, 181, 193, 530, 604
BspANI	GGCC	4 cut(s)	23, 411, 463, 603
BspCNI	CTCAG	4 cut(s)	484, 685, 687, 790
BspLI	GGNNCC	5 cut(s)	205, 288, 462, 687, 1026
BspMI	ACCTGC	1 cut(s)	532
BspOI	GCTAGC	1 cut(s)	35
BspPI	GGATC	7 cut(s)	151, 156, 198, 203, 211, 264, 273
BspTNI	GGTCTC	1 cut(s)	898
BsrDI	GCAATG	1 cut(s)	190
BsrFI	RCCGGY	4 cut(s)	313, 411, 532, 776
BsrI	ACTGG	2 cut(s)	550, 954
BssAI	RCCGGY	4 cut(s)	313, 411, 532, 776
BssECI	CCNNGG	6 cut(s)	18, 169, 293, 348, 716, 883
BssMI	GATC	8 cut(s)	156, 161, 195, 203, 256, 265, 732, 794
BssNI	GRCGYC	1 cut(s)	344
BssSI	CACGAG	1 cut(s)	44
BssT1I	CCWWGG	4 cut(s)	18, 169, 716, 883
Bst2BI	CACGAG	1 cut(s)	44
Bst2UI	CCWGG	2 cut(s)	567, 746
Bst4CI	ACNGT	2 cut(s)	230, 502
BstACI	GRCGYC	1 cut(s)	344
BstC8I	GCNNGC	4 cut(s)	33, 324, 449, 854
BstDEI	CTNAG	5 cut(s)	492, 672, 695, 798, 836
BstDSI	CCRYGG	3 cut(s)	18, 293, 348
BstENI	CCTNNNNNAGG	1 cut(s)	87
BstF5I	GGATG	4 cut(s)	180, 484, 515, 562
BstH2I	RGCGCY	1 cut(s)	323
BstHHI	GCGC	1 cut(s)	322
BstKTI	GATC	8 cut(s)	159, 164, 198, 206, 259, 268, 735, 797
BstMAI	GTCTC	2 cut(s)	215, 898
BstMBI	GATC	8 cut(s)	156, 161, 195, 203, 256, 265, 732, 794
BstMWI	GCNNNNNNNGC	5 cut(s)	23, 32, 317, 453, 1004
BstNI	CCWGG	2 cut(s)	567, 746
BstNSI	RCATGY	2 cut(s)	330, 443
BstPAI	GACNNNNGTC	1 cut(s)	78
BstSCI	CCNGG	2 cut(s)	565, 744
BstSFI	CTRYAG	1 cut(s)	846
BstV1I	GCAGC	3 cut(s)	618, 954, 1007
BstV2I	GAAGAC	2 cut(s)	369, 1052
BstX2I	RGATCY	2 cut(s)	156, 203
BstYI	RGATCY	2 cut(s)	156, 203
BsuRI	GGCC	4 cut(s)	23, 411, 463, 603
BtgI	CCRYGG	3 cut(s)	18, 293, 348
BtsCI	GGATG	4 cut(s)	180, 484, 515, 562
BtsI	GCAGTG	1 cut(s)	138
BtsIMutI	CAGTG	1 cut(s)	138
BveI	ACCTGC	1 cut(s)	532
Cac8I	GCNNGC	4 cut(s)	33, 324, 449, 854
CfoI	GCGC	1 cut(s)	322
Cfr10I	RCCGGY	4 cut(s)	313, 411, 532, 776
Cfr13I	GGNCC	2 cut(s)	286, 461
CseI	GACGC	1 cut(s)	352
Csp6I	GTAC	3 cut(s)	301, 415, 1016
CspAI	ACCGGT	2 cut(s)	313, 776
CviAII	CATG	6 cut(s)	19, 121, 308, 327, 440, 638
CviQI	GTAC	3 cut(s)	301, 415, 1016
DdeI	CTNAG	5 cut(s)	492, 672, 695, 798, 836
DpnI	GATC	8 cut(s)	158, 163, 197, 205, 258, 267, 734, 796
DpnII	GATC	8 cut(s)	156, 161, 195, 203, 256, 265, 732, 794
DriI	GACNNNNNGTC	1 cut(s)	228
EaeI	YGGCCR	2 cut(s)	21, 409
Eam1105I	GACNNNNNGTC	1 cut(s)	228
EciI	GGCGGA	1 cut(s)	208
Ecl136II	GAGCTC	3 cut(s)	699, 742, 1068
Eco130I	CCWWGG	4 cut(s)	18, 169, 716, 883
Eco24I	GRGCYC	3 cut(s)	701, 744, 1070
Eco31I	GGTCTC	1 cut(s)	898
Eco47I	GGWCC	1 cut(s)	286
Eco53kI	GAGCTC	3 cut(s)	699, 742, 1068
Eco57I	CTGAAG	1 cut(s)	558
Eco88I	CYCGRG	2 cut(s)	144, 457
EcoICRI	GAGCTC	3 cut(s)	699, 742, 1068
EcoNI	CCTNNNNNAGG	1 cut(s)	87
EcoO109I	RGGNCCY	1 cut(s)	286
EcoRI	GAATTC	1 cut(s)	374
EcoRII	CCWGG	2 cut(s)	565, 744
EcoT14I	CCWWGG	4 cut(s)	18, 169, 716, 883
EcoT22I	ATGCAT	1 cut(s)	564
EcoT38I	GRGCYC	3 cut(s)	701, 744, 1070
ErhI	CCWWGG	4 cut(s)	18, 169, 716, 883
Esp3I	CGTCTC	1 cut(s)	215
FaeI	CATG	6 cut(s)	22, 124, 311, 330, 443, 641
FalI	AAGNNNNNCTT	4 cut(s)	19, 51, 824, 856
FaqI	GGGAC	1 cut(s)	604
FatI	CATG	6 cut(s)	18, 120, 307, 326, 439, 637
FauNDI	CATATG	1 cut(s)	973
FbaI	TGATCA	1 cut(s)	732
Fnu4HI	GCNGC	5 cut(s)	24, 604, 607, 968, 996
FokI	GGATG	4 cut(s)	187, 491, 522, 549
FriOI	GRGCYC	3 cut(s)	701, 744, 1070
Fsp4HI	GCNGC	5 cut(s)	24, 604, 607, 968, 996
FspBI	CTAG	7 cut(s)	32, 624, 650, 717, 884, 918, 1091
GlaI	GCGC	1 cut(s)	321
GluI	GCNGC	5 cut(s)	24, 604, 607, 968, 996
GsaI	CCCAGC	1 cut(s)	1011
GsuI	CTGGAG	2 cut(s)	567, 728
HaeII	RGCGCY	1 cut(s)	323
HaeIII	GGCC	4 cut(s)	23, 411, 463, 603
HapII	CCGG	6 cut(s)	314, 412, 533, 764, 777, 947
HgaI	GACGC	1 cut(s)	352
HhaI	GCGC	1 cut(s)	322
Hin1I	GRCGYC	1 cut(s)	344
Hin1II	CATG	6 cut(s)	22, 124, 311, 330, 443, 641
Hin6I	GCGC	1 cut(s)	320
HinP1I	GCGC	1 cut(s)	320
HindIII	AAGCTT	1 cut(s)	833
HinfI	GANTC	1 cut(s)	634
HpaII	CCGG	6 cut(s)	314, 412, 533, 764, 777, 947
HphI	GGTGA	4 cut(s)	445, 547, 742, 1054
Hpy166II	GTNNAC	1 cut(s)	246
Hpy188I	TCNGA	8 cut(s)	112, 161, 234, 256, 265, 696, 737, 799
Hpy188III	TCNNGA	4 cut(s)	46, 146, 280, 706
Hpy8I	GTNNAC	1 cut(s)	246
HpyAV	CCTTC	5 cut(s)	175, 277, 589, 1015, 1078
HpyCH4III	ACNGT	2 cut(s)	230, 502
HpyCH4V	TGCA	8 cut(s)	88, 311, 384, 521, 527, 556, 562, 995
HpyF10VI	GCNNNNNNNGC	5 cut(s)	23, 32, 317, 453, 1004
HpyF3I	CTNAG	5 cut(s)	492, 672, 695, 798, 836
Hsp92I	GRCGYC	1 cut(s)	344
Hsp92II	CATG	6 cut(s)	22, 124, 311, 330, 443, 641
HspAI	GCGC	1 cut(s)	320
Ksp22I	TGATCA	1 cut(s)	732
Kzo9I	GATC	8 cut(s)	156, 161, 195, 203, 256, 265, 732, 794
LmnI	GCTCC	5 cut(s)	569, 747, 1030, 1073, 1087
Lsp1109I	GCAGC	3 cut(s)	618, 954, 1007
LweI	GCATC	3 cut(s)	4, 549, 571
MaeI	CTAG	7 cut(s)	32, 624, 650, 717, 884, 918, 1091
MaeIII	GTNAC	4 cut(s)	340, 433, 535, 808
MalI	GATC	8 cut(s)	158, 163, 197, 205, 258, 267, 734, 796
MboI	GATC	8 cut(s)	156, 161, 195, 203, 256, 265, 732, 794
MboII	GAAGA	2 cut(s)	374, 1057
MflI	RGATCY	2 cut(s)	156, 203
MhlI	GDGCHC	3 cut(s)	701, 744, 1070
MluCI	AATT	4 cut(s)	374, 386, 401, 771
MmeI	TCCRAC	3 cut(s)	90, 234, 1095
Mph1103I	ATGCAT	1 cut(s)	564
MseI	TTAA	2 cut(s)	657, 830
MspI	CCGG	6 cut(s)	314, 412, 533, 764, 777, 947
MspR9I	CCNGG	2 cut(s)	567, 746
Mva1269I	GAATGC	1 cut(s)	625
MvaI	CCWGG	2 cut(s)	567, 746
MwoI	GCNNNNNNNGC	5 cut(s)	23, 32, 317, 453, 1004
NcoI	CCATGG	1 cut(s)	18
NdeI	CATATG	1 cut(s)	973
NdeII	GATC	8 cut(s)	156, 161, 195, 203, 256, 265, 732, 794
NheI	GCTAGC	1 cut(s)	31
NlaIII	CATG	6 cut(s)	22, 124, 311, 330, 443, 641
NlaIV	GGNNCC	5 cut(s)	205, 288, 462, 687, 1026
NmuCI	GTSAC	4 cut(s)	340, 433, 535, 808
NsiI	ATGCAT	1 cut(s)	564
NspI	RCATGY	2 cut(s)	330, 443
PaqCI	CACCTGC	1 cut(s)	532
PciI	ACATGT	1 cut(s)	439
PctI	GAATGC	1 cut(s)	625
PfeI	GAWTC	1 cut(s)	634
PfoI	TCCNGGA	2 cut(s)	565, 744
PinAI	ACCGGT	2 cut(s)	313, 776
PkrI	GCNGC	5 cut(s)	25, 605, 608, 969, 997
PpuMI	RGGWCCY	1 cut(s)	286
PscI	ACATGT	1 cut(s)	439
PshAI	GACNNNNGTC	1 cut(s)	78
PsiI	TTATAA	1 cut(s)	153
Psp124BI	GAGCTC	3 cut(s)	701, 744, 1070
Psp5II	RGGWCCY	1 cut(s)	286
Psp6I	CCWGG	2 cut(s)	565, 744
PspFI	CCCAGC	1 cut(s)	1007
PspGI	CCWGG	2 cut(s)	565, 744
PspN4I	GGNNCC	5 cut(s)	205, 288, 462, 687, 1026
PspPI	GGNCC	2 cut(s)	286, 461
PspPPI	RGGWCCY	1 cut(s)	286
PsuI	RGATCY	2 cut(s)	156, 203
RsaI	GTAC	3 cut(s)	302, 416, 1017
RsaNI	GTAC	3 cut(s)	301, 415, 1016
SacI	GAGCTC	3 cut(s)	701, 744, 1070
SaqAI	TTAA	2 cut(s)	657, 830
SatI	GCNGC	5 cut(s)	24, 604, 607, 968, 996
Sau3AI	GATC	8 cut(s)	156, 161, 195, 203, 256, 265, 732, 794
Sau96I	GGNCC	2 cut(s)	286, 461
ScrFI	CCNGG	2 cut(s)	567, 746
SduI	GDGCHC	3 cut(s)	701, 744, 1070
SfaNI	GCATC	3 cut(s)	4, 549, 571
SfcI	CTRYAG	1 cut(s)	846
SgrAI	CRCCGGYG	2 cut(s)	313, 532
SinI	GGWCC	1 cut(s)	286
Sse9I	AATT	4 cut(s)	374, 386, 401, 771
SsiI	CCGC	5 cut(s)	24, 181, 193, 530, 604
SspMI	CTAG	7 cut(s)	32, 624, 650, 717, 884, 918, 1091
SstI	GAGCTC	3 cut(s)	701, 744, 1070
StyD4I	CCNGG	2 cut(s)	565, 744
StyI	CCWWGG	4 cut(s)	18, 169, 716, 883
TaaI	ACNGT	2 cut(s)	230, 502
TaqI	TCGA	3 cut(s)	268, 581, 793
TasI	AATT	4 cut(s)	374, 386, 401, 771
TatI	WGTACW	1 cut(s)	1015
TauI	GCSGC	2 cut(s)	26, 606
TfiI	GAWTC	1 cut(s)	634
Tru1I	TTAA	2 cut(s)	657, 830
Tru9I	TTAA	2 cut(s)	657, 830
TscAI	CASTG	1 cut(s)	145
TseFI	GTSAC	4 cut(s)	340, 433, 535, 808
TseI	GCWGC	3 cut(s)	606, 967, 995
Tsp45I	GTSAC	4 cut(s)	340, 433, 535, 808
TspDTI	ATGAA	4 cut(s)	27, 109, 626, 974
TspGWI	ACGGA	2 cut(s)	68, 239
TspRI	CASTG	1 cut(s)	145
VpaK11BI	GGWCC	1 cut(s)	286
XagI	CCTNNNNNAGG	1 cut(s)	87
XapI	RAATTY	2 cut(s)	374, 386
XceI	RCATGY	2 cut(s)	330, 443
XcmI	CCANNNNNNNNNTGG	1 cut(s)	427
XmaJI	CCTAGG	2 cut(s)	716, 883
XspI	CTAG	7 cut(s)	32, 624, 650, 717, 884, 918, 1091
Zsp2I	ATGCAT	1 cut(s)	564

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.