Rmu_sc0016393.1_g000002

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0016393.1
OG0000187
Physical Location & Seq
Reverse (-)
5084 .. 6370
1287 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0016393.1_g000002.1.cds

Sequence Viewer

Length: 1191 bp
atgtcttctgttgatgcaatggctgctagactagcctcctctcttgctatcgctgaaggcaagaggcaggttgatttgcgacctacgcagaggaagggtttgcgacaggcaaacgtattcttagtgggcaagctcctcaccgctcgggatttcaaggtcaagtctttcatggggatgttttgcaacgcctggagggttaatgggtcgttgcaggtggaggaagcagaaggacagagggtgttattcactctgtcggatccgtctgatcgagttcggatatggcggggtgccccatgggggtataatcacgcgcctgtggctctagctttgtatgatggtatcatgtcggtggagaaagtgcccctagccatggcatcatattggataactcttcagggaataccaccagcgtttcggtttgaacatgtcatgaccatgatcggctacacgctgggggattttcaggaaattgataagaatgctaagaagactgggaaactccggattagggttgagatacctttgaataaaccattgcctttcaagcggtggtacttggtggaagatgcggtcgagtttcgctacgatgatgaagccgagagaattgttttggggtcccagaccacggtgtcagagatgaacgatgggggctcgccgggagtttgggcggggtcaacatcggggcatgctagtggtagttggctcactactggtgtaagagctagggttaccaccccgtgtccaccgttggtatttcggactccagatcctggtctgagtggggaaccatgtttgaatgctttgtttccaaagcagaagcgacatgttgtggtgcgtgaacttcaggggacaacggaaactccagaacgtatcattggcaagcatcgagacagagaagacagcctgactatctcccctaagaaactgaaattgagtttggcggtaggtaagagaaatctcattcttgattctaaaaagcttggcctggaccctatacaggaggagactcattctgggagtatgaagcggaagcgaggacgaccttctggcagtagaaataagtcgtcgtctagtggcaagcagcagatctcaaagcatggtgagggtaaggagaagaataagtctccaacaatgaagcagtctgtagggaaacactccaacccgaaagggaaggagttggctcttttttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

396

Amino Acids

43.89

Weight (kDa)

9.98

Isoelectric Point (pI)

40.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000187)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20170 FvH4_4g06831
rosa_chinensis RchiOBHm_Chr1g0321991 RchiOBHm_Chr2g0161811
rosa_laevigata RLG00000015375 RLG00000018377
rosa_multiflora Rmu_co8011754.1_g000001 Rmu_co8019986.1_g000001 Rmu_co8067766.1_g000001 Rmu_co8156128.1_g000001 Rmu_co8219154.1_g000003 Rmu_co8297235.1_g000001 Rmu_co8345223.1_g000001 Rmu_co8364775.1_g000001 Rmu_co8465075.1_g000001 Rmu_sc0000007.1_g000002 Rmu_sc0000054.1_g000015 Rmu_sc0000054.1_g000023 Rmu_sc0000145.1_g000010 Rmu_sc0000166.1_g000006 Rmu_sc0000218.1_g000012 Rmu_sc0000339.1_g000008 Rmu_sc0000342.1_g000015 Rmu_sc0000464.1_g000008 Rmu_sc0000620.1_g000003 Rmu_sc0000638.1_g000017 Rmu_sc0000890.1_g000007 Rmu_sc0000894.1_g000024 Rmu_sc0000909.1_g000010 Rmu_sc0000928.1_g000020 Rmu_sc0000977.1_g000007 Rmu_sc0001022.1_g000003 Rmu_sc0001035.1_g000037 Rmu_sc0001060.1_g000008 Rmu_sc0001168.1_g000005 Rmu_sc0001173.1_g000022 Rmu_sc0001179.1_g000016 Rmu_sc0001408.1_g000003 Rmu_sc0001455.1_g000005 Rmu_sc0001484.1_g000008 Rmu_sc0001585.1_g000010 Rmu_sc0001702.1_g000030 Rmu_sc0001755.1_g000063 Rmu_sc0001903.1_g000009 Rmu_sc0002099.1_g000001 Rmu_sc0002142.1_g000012 Rmu_sc0002158.1_g000014 Rmu_sc0002307.1_g000009 Rmu_sc0002358.1_g000013 Rmu_sc0002421.1_g000002 Rmu_sc0002426.1_g000003 Rmu_sc0002438.1_g000001 Rmu_sc0002461.1_g000001 Rmu_sc0002508.1_g000003 Rmu_sc0002532.1_g000056 Rmu_sc0002583.1_g000002 Rmu_sc0002927.1_g000033 Rmu_sc0003033.1_g000040 Rmu_sc0003271.1_g000006 Rmu_sc0003381.1_g000006 Rmu_sc0003507.1_g000007 Rmu_sc0003578.1_g000003 Rmu_sc0003693.1_g000004 Rmu_sc0003693.1_g000005 Rmu_sc0003704.1_g000003 Rmu_sc0003840.1_g000002 Rmu_sc0004084.1_g000026 Rmu_sc0004193.1_g000007 Rmu_sc0004234.1_g000033 Rmu_sc0004235.1_g000025 Rmu_sc0004435.1_g000006 Rmu_sc0004727.1_g000003 Rmu_sc0004741.1_g000001 Rmu_sc0004926.1_g000004 Rmu_sc0005365.1_g000001 Rmu_sc0005392.1_g000007 Rmu_sc0005415.1_g000001 Rmu_sc0005539.1_g000007 Rmu_sc0005708.1_g000017 Rmu_sc0006317.1_g000007 Rmu_sc0006453.1_g000054 Rmu_sc0006536.1_g000004 Rmu_sc0006740.1_g000022 Rmu_sc0006763.1_g000012 Rmu_sc0007115.1_g000002 Rmu_sc0007115.1_g000010 Rmu_sc0007129.1_g000017 Rmu_sc0007131.1_g000010 Rmu_sc0008373.1_g000008 Rmu_sc0009005.1_g000008 Rmu_sc0009252.1_g000007 Rmu_sc0009599.1_g000022 Rmu_sc0009785.1_g000027 Rmu_sc0009891.1_g000003 Rmu_sc0010099.1_g000010 Rmu_sc0010266.1_g000008 Rmu_sc0010334.1_g000003 Rmu_sc0010381.1_g000001 Rmu_sc0010496.1_g000003 Rmu_sc0010496.1_g000004 Rmu_sc0010546.1_g000003 Rmu_sc0011482.1_g000006 Rmu_sc0011875.1_g000010 Rmu_sc0011917.1_g000006 Rmu_sc0012293.1_g000004 Rmu_sc0012847.1_g000003 Rmu_sc0013773.1_g000001 Rmu_sc0016060.1_g000003 Rmu_sc0016170.1_g000013 Rmu_sc0016393.1_g000002 Rmu_sc0017589.1_g000001 Rmu_sc0017786.1_g000005 Rmu_sc0018326.1_g000002 Rmu_sc0020760.1_g000001 Rmu_sc0021262.1_g000003 Rmu_sc0023851.1_g000002 Rmu_sc0024044.1_g000001 Rmu_sc0026820.1_g000001 Rmu_sc0032306.1_g000001 Rmu_sc0035666.1_g000001 Rmu_sc0036881.1_g000001 Rmu_sc0037030.1_g000001 Rmu_sc0037158.1_g000001 Rmu_ssc0000016.1_g000002 Rmu_ssc0000044.1_g000012 Rmu_ssc0000044.1_g000014 Rmu_ssc0000050.1_g000064 Rmu_ssc0000064.1_g000022 Rmu_ssc0000154.1_g000037 Rmu_ssc0000178.1_g000013 Rmu_ssc0000217.1_g000022 Rmu_ssc0000392.1_g000004
rosa_roxburghii Rroxscaffold_3G00242000 Rroxscaffold_3G00242530 Rroxscaffold_6G00406010
rosa_rugosa Rorug01G0062000 Rorug02G0224000 Rorug02G0262900 Rorug02G0263000 Rorug02G0358900 Rorug02G0360500 Rorug02G0378500.1 Rorug02G0378600 Rorug02G0394700 Rorug03G0122900 Rorug03G0254600 Rorug03G0254700 Rorug03G0254800 Rorug04G0042200.1 Rorug04G0378100 Rorug05G0053400 Rorug05G0238600 Rorug05G0364500 Rorug05G0562000 Rorug06G0089300 Rorug06G0089400 Rorug06G0145700 Rorug07G0111600 Rorug07G0229500.1 Rorug07G0287600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 202
AasI GACNNNNNNGTC 1 cut(s) 628
Acc36I ACCTGC 2 cut(s) 58, 202
AccB1I GGYRCC 1 cut(s) 287
AccB7I CCANNNNNTGG 1 cut(s) 770
AccBSI CCGCTC 1 cut(s) 143
AccII CGCG 1 cut(s) 311
AccIII TCCGGA 1 cut(s) 501
AciI CCGC 7 cut(s) 141, 283, 547, 569, 668, 941, 1027
AclWI GGATC 3 cut(s) 251, 264, 761
AcuI CTGAAG 3 cut(s) 75, 377, 827
AdeI CACNNNGTG 1 cut(s) 738
AfaI GTAC 1 cut(s) 554
AfiI CCNNNNNNNGG 6 cut(s) 297, 370, 508, 625, 770, 997
AflIII ACRYGT 2 cut(s) 424, 823
AgsI TTSAA 5 cut(s) 154, 422, 526, 544, 796
AjnI CCWGG 3 cut(s) 188, 769, 984
AjuI GAANNNNNNNTTGG 4 cut(s) 858, 890, 920, 952
AluBI AGCT 4 cut(s) 133, 326, 722, 979
AluI AGCT 4 cut(s) 133, 326, 722, 979
Alw26I GTCTC 3 cut(s) 882, 998, 1128
AlwI GGATC 3 cut(s) 251, 264, 761
AlwNI CAGNNNCTG 1 cut(s) 770
Ama87I CYCGRG 1 cut(s) 144
Aor13HI TCCGGA 1 cut(s) 501
AoxI GGCC 1 cut(s) 982
ApeKI GCWGC 2 cut(s) 23, 1081
AspLEI GCGC 1 cut(s) 313
AspS9I GGNCC 2 cut(s) 615, 988
AsuC2I CCSGG 1 cut(s) 657
AsuHPI GGTGA 2 cut(s) 130, 1112
AvaI CYCGRG 1 cut(s) 144
AvaII GGWCC 2 cut(s) 615, 988
BaeGI GKGCMC 2 cut(s) 292, 363
BamHI GGATCC 1 cut(s) 256
BanI GGYRCC 1 cut(s) 287
BanII GRGCYC 1 cut(s) 653
BbsI GAAGAC 2 cut(s) 494, 903
BbvI GCAGC 2 cut(s) 10, 1093
BccI CCATC 2 cut(s) 329, 638
BciT130I CCWGG 3 cut(s) 190, 771, 986
BcnI CCSGG 1 cut(s) 657
BcoDI GTCTC 3 cut(s) 882, 998, 1128
BfaI CTAG 7 cut(s) 27, 32, 323, 365, 690, 723, 1071
BfmI CTRYAG 1 cut(s) 1143
BfuAI ACCTGC 2 cut(s) 58, 202
BglII AGATCT 1 cut(s) 1086
BisI GCNGC 2 cut(s) 24, 1082
BlsI GCNGC 2 cut(s) 25, 1083
Bme1390I CCNGG 4 cut(s) 190, 657, 771, 986
Bme18I GGWCC 2 cut(s) 615, 988
BmeT110I CYCGRG 1 cut(s) 144
BmgT120I GGNCC 2 cut(s) 615, 988
BmiI GGNNCC 6 cut(s) 258, 289, 616, 617, 786, 990
BmrFI CCNGG 4 cut(s) 190, 657, 771, 986
BmrI ACTGGG 1 cut(s) 501
BmsI GCATC 4 cut(s) 4, 383, 556, 892
BmuI ACTGGG 1 cut(s) 501
BpiI GAAGAC 2 cut(s) 494, 903
BpmI CTGGAG 3 cut(s) 211, 747, 846
BpuMI CCSGG 1 cut(s) 657
BsaJI CCNNGG 3 cut(s) 293, 369, 624
BsaWI WCCGGW 1 cut(s) 501
BsaXI ACNNNNNCTCC 2 cut(s) 844, 874
Bsc4I CCNNNNNNNGG 6 cut(s) 297, 370, 508, 625, 770, 997
Bse1I ACTGG 2 cut(s) 496, 715
Bse3DI GCAATG 2 cut(s) 24, 533
BseAI TCCGGA 1 cut(s) 501
BseBI CCWGG 3 cut(s) 190, 771, 986
BseDI CCNNGG 3 cut(s) 293, 369, 624
BseGI GGATG 1 cut(s) 180
BseLI CCNNNNNNNGG 6 cut(s) 297, 370, 508, 625, 770, 997
BseMI GCAATG 2 cut(s) 24, 533
BseMII CTCAG 1 cut(s) 767
BseNI ACTGG 2 cut(s) 496, 715
BseRI GAGGAG 3 cut(s) 28, 125, 1016
BseSI GKGCMC 2 cut(s) 292, 363
BseXI GCAGC 2 cut(s) 10, 1093
BseYI CCCAGC 1 cut(s) 451
Bsh1236I CGCG 1 cut(s) 311
Bsh1285I CGRYCG 1 cut(s) 573
BshFI GGCC 1 cut(s) 984
BshNI GGYRCC 1 cut(s) 287
BsiEI CGRYCG 1 cut(s) 573
BsiHKCI CYCGRG 1 cut(s) 144
BsiSI CCGG 2 cut(s) 502, 656
BslFI GGGAC 2 cut(s) 601, 862
BslI CCNNNNNNNGG 6 cut(s) 297, 370, 508, 625, 770, 997
BsmAI GTCTC 3 cut(s) 882, 998, 1128
BsmFI GGGAC 2 cut(s) 601, 862
BsmI GAATGC 2 cut(s) 484, 802
BsnI GGCC 1 cut(s) 984
BsoBI CYCGRG 1 cut(s) 144
Bsp1286I GDGCHC 3 cut(s) 292, 363, 653
Bsp13I TCCGGA 1 cut(s) 501
Bsp143I GATC 5 cut(s) 256, 265, 438, 766, 1086
Bsp19I CCATGG 2 cut(s) 293, 369
BspACI CCGC 7 cut(s) 141, 283, 547, 569, 668, 941, 1027
BspANI GGCC 1 cut(s) 984
BspCNI CTCAG 1 cut(s) 768
BspEI TCCGGA 1 cut(s) 501
BspFNI CGCG 1 cut(s) 311
BspHI TCATGA 1 cut(s) 429
BspLI GGNNCC 6 cut(s) 258, 289, 616, 617, 786, 990
BspMI ACCTGC 2 cut(s) 58, 202
BspPI GGATC 3 cut(s) 251, 264, 761
BspT107I GGYRCC 1 cut(s) 287
BsrBI CCGCTC 1 cut(s) 143
BsrDI GCAATG 2 cut(s) 24, 533
BsrI ACTGG 2 cut(s) 496, 715
BssECI CCNNGG 3 cut(s) 293, 369, 624
BssMI GATC 5 cut(s) 256, 265, 438, 766, 1086
BssT1I CCWWGG 2 cut(s) 293, 369
Bst2UI CCWGG 3 cut(s) 190, 771, 986
Bst4CI ACNGT 2 cut(s) 628, 747
Bst6I CTCTTC 1 cut(s) 396
BstAPI GCANNNNNTGC 1 cut(s) 23
BstC8I GCNNGC 5 cut(s) 131, 653, 687, 881, 1079
BstDEI CTNAG 4 cut(s) 121, 483, 776, 918
BstDSI CCRYGG 3 cut(s) 293, 369, 624
BstEII GGTNACC 1 cut(s) 727
BstF5I GGATG 1 cut(s) 180
BstFNI CGCG 1 cut(s) 311
BstHHI GCGC 1 cut(s) 313
BstKTI GATC 5 cut(s) 259, 268, 441, 769, 1089
BstMAI GTCTC 3 cut(s) 882, 998, 1128
BstMBI GATC 5 cut(s) 256, 265, 438, 766, 1086
BstMCI CGRYCG 1 cut(s) 573
BstMWI GCNNNNNNNGC 5 cut(s) 23, 32, 85, 317, 544
BstNI CCWGG 3 cut(s) 190, 771, 986
BstNSI RCATGY 3 cut(s) 428, 689, 827
BstPI GGTNACC 1 cut(s) 727
BstSCI CCNGG 4 cut(s) 188, 655, 769, 984
BstSFI CTRYAG 1 cut(s) 1143
BstSLI GKGCMC 2 cut(s) 292, 363
BstUI CGCG 1 cut(s) 311
BstV1I GCAGC 2 cut(s) 10, 1093
BstV2I GAAGAC 2 cut(s) 494, 903
BstX2I RGATCY 3 cut(s) 256, 766, 1086
BstYI RGATCY 3 cut(s) 256, 766, 1086
BsuRI GGCC 1 cut(s) 984
BtgI CCRYGG 3 cut(s) 293, 369, 624
BtsCI GGATG 1 cut(s) 180
BveI ACCTGC 2 cut(s) 58, 202
Cac8I GCNNGC 5 cut(s) 131, 653, 687, 881, 1079
CaiI CAGNNNCTG 1 cut(s) 770
CciI TCATGA 1 cut(s) 429
CfoI GCGC 1 cut(s) 313
Cfr13I GGNCC 2 cut(s) 615, 988
Csp6I GTAC 1 cut(s) 553
CviQI GTAC 1 cut(s) 553
DdeI CTNAG 4 cut(s) 121, 483, 776, 918
DpnI GATC 5 cut(s) 258, 267, 440, 768, 1088
DpnII GATC 5 cut(s) 256, 265, 438, 766, 1086
DraIII CACNNNGTG 1 cut(s) 738
DrdI GACNNNNNNGTC 1 cut(s) 628
DseDI GACNNNNNNGTC 1 cut(s) 628
Eam1104I CTCTTC 1 cut(s) 396
EarI CTCTTC 1 cut(s) 396
Eco130I CCWWGG 2 cut(s) 293, 369
Eco24I GRGCYC 1 cut(s) 653
Eco47I GGWCC 2 cut(s) 615, 988
Eco57I CTGAAG 3 cut(s) 75, 377, 827
Eco88I CYCGRG 1 cut(s) 144
Eco91I GGTNACC 1 cut(s) 727
EcoO109I RGGNCCY 1 cut(s) 615
EcoO65I GGTNACC 1 cut(s) 727
EcoRII CCWGG 3 cut(s) 188, 769, 984
EcoT14I CCWWGG 2 cut(s) 293, 369
EcoT38I GRGCYC 1 cut(s) 653
ErhI CCWWGG 2 cut(s) 293, 369
FaqI GGGAC 2 cut(s) 601, 862
FauI CCCGC 2 cut(s) 276, 661
Fnu4HI GCNGC 2 cut(s) 24, 1082
FokI GGATG 1 cut(s) 187
FriOI GRGCYC 1 cut(s) 653
Fsp4HI GCNGC 2 cut(s) 24, 1082
FspBI CTAG 7 cut(s) 27, 32, 323, 365, 690, 723, 1071
GlaI GCGC 1 cut(s) 312
GluI GCNGC 2 cut(s) 24, 1082
GsaI CCCAGC 1 cut(s) 455
GsuI CTGGAG 3 cut(s) 211, 747, 846
HaeIII GGCC 1 cut(s) 984
HapII CCGG 2 cut(s) 502, 656
HhaI GCGC 1 cut(s) 313
Hin6I GCGC 1 cut(s) 311
HinP1I GCGC 1 cut(s) 311
HincII GTYRAC 1 cut(s) 675
HindII GTYRAC 1 cut(s) 675
HindIII AAGCTT 1 cut(s) 977
HinfI GANTC 3 cut(s) 760, 968, 1006
HpaII CCGG 2 cut(s) 502, 656
HphI GGTGA 2 cut(s) 130, 1112
Hpy166II GTNNAC 3 cut(s) 675, 743, 839
Hpy188I TCNGA 6 cut(s) 256, 265, 276, 634, 759, 777
Hpy188III TCNNGA 8 cut(s) 146, 430, 464, 502, 764, 863, 887, 965
Hpy8I GTNNAC 3 cut(s) 675, 743, 839
Hpy99I CGWCG 1 cut(s) 1069
HpyAV CCTTC 5 cut(s) 50, 88, 221, 1053, 1165
HpyCH4III ACNGT 2 cut(s) 628, 747
HpyCH4IV ACGT 2 cut(s) 114, 868
HpyCH4V TGCA 3 cut(s) 17, 183, 211
HpyF10VI GCNNNNNNNGC 5 cut(s) 23, 32, 85, 317, 544
HpyF3I CTNAG 4 cut(s) 121, 483, 776, 918
HpySE526I ACGT 2 cut(s) 114, 868
HspAI GCGC 1 cut(s) 311
KflI GGGWCCC 1 cut(s) 615
Kpn2I TCCGGA 1 cut(s) 501
Kzo9I GATC 5 cut(s) 256, 265, 438, 766, 1086
LmnI GCTCC 1 cut(s) 138
Lsp1109I GCAGC 2 cut(s) 10, 1093
LweI GCATC 4 cut(s) 4, 383, 556, 892
MaeI CTAG 7 cut(s) 27, 32, 323, 365, 690, 723, 1071
MaeII ACGT 2 cut(s) 114, 868
MaeIII GTNAC 1 cut(s) 727
MalI GATC 5 cut(s) 258, 267, 440, 768, 1088
MbiI CCGCTC 1 cut(s) 143
MboI GATC 5 cut(s) 256, 265, 438, 766, 1086
MboII GAAGA 5 cut(s) 383, 499, 575, 908, 1126
MflI RGATCY 3 cut(s) 256, 766, 1086
MhlI GDGCHC 3 cut(s) 292, 363, 653
MluCI AATT 3 cut(s) 468, 603, 929
MlyI GAGTC 2 cut(s) 754, 1000
MmeI TCCRAC 3 cut(s) 234, 1151, 1182
MroI TCCGGA 1 cut(s) 501
MseI TTAA 1 cut(s) 198
MslI CAYNNNNRTG 4 cut(s) 173, 347, 434, 690
MspI CCGG 2 cut(s) 502, 656
MspR9I CCNGG 4 cut(s) 190, 657, 771, 986
Mva1269I GAATGC 2 cut(s) 484, 802
MvaI CCWGG 3 cut(s) 190, 771, 986
MvnI CGCG 1 cut(s) 311
MwoI GCNNNNNNNGC 5 cut(s) 23, 32, 85, 317, 544
NciI CCSGG 1 cut(s) 657
NcoI CCATGG 2 cut(s) 293, 369
NdeII GATC 5 cut(s) 256, 265, 438, 766, 1086
NlaIV GGNNCC 6 cut(s) 258, 289, 616, 617, 786, 990
NmeAIII GCCGAG 1 cut(s) 622
NspI RCATGY 3 cut(s) 428, 689, 827
PaeI GCATGC 1 cut(s) 689
PagI TCATGA 1 cut(s) 429
PaqCI CACCTGC 1 cut(s) 202
PciI ACATGT 2 cut(s) 424, 823
PctI GAATGC 2 cut(s) 484, 802
PfeI GAWTC 1 cut(s) 968
PflMI CCANNNNNTGG 1 cut(s) 770
PkrI GCNGC 2 cut(s) 25, 1083
PleI GAGTC 2 cut(s) 754, 1000
PpsI GAGTC 2 cut(s) 754, 1000
PpuMI RGGWCCY 1 cut(s) 615
PscI ACATGT 2 cut(s) 424, 823
Psp5II RGGWCCY 1 cut(s) 615
Psp6I CCWGG 3 cut(s) 188, 769, 984
PspEI GGTNACC 1 cut(s) 727
PspFI CCCAGC 1 cut(s) 451
PspGI CCWGG 3 cut(s) 188, 769, 984
PspN4I GGNNCC 6 cut(s) 258, 289, 616, 617, 786, 990
PspPI GGNCC 2 cut(s) 615, 988
PspPPI RGGWCCY 1 cut(s) 615
PstNI CAGNNNCTG 1 cut(s) 770
PsuI RGATCY 3 cut(s) 256, 766, 1086
RsaI GTAC 1 cut(s) 554
RsaNI GTAC 1 cut(s) 553
RseI CAYNNNNRTG 4 cut(s) 173, 347, 434, 690
SaqAI TTAA 1 cut(s) 198
SatI GCNGC 2 cut(s) 24, 1082
Sau3AI GATC 5 cut(s) 256, 265, 438, 766, 1086
Sau96I GGNCC 2 cut(s) 615, 988
SchI GAGTC 2 cut(s) 754, 1000
ScrFI CCNGG 4 cut(s) 190, 657, 771, 986
SduI GDGCHC 3 cut(s) 292, 363, 653
SfaNI GCATC 4 cut(s) 4, 383, 556, 892
SfcI CTRYAG 1 cut(s) 1143
SinI GGWCC 2 cut(s) 615, 988
SmiMI CAYNNNNRTG 4 cut(s) 173, 347, 434, 690
SphI GCATGC 1 cut(s) 689
Sse9I AATT 3 cut(s) 468, 603, 929
SsiI CCGC 7 cut(s) 141, 283, 547, 569, 668, 941, 1027
SspMI CTAG 7 cut(s) 27, 32, 323, 365, 690, 723, 1071
StyD4I CCNGG 4 cut(s) 188, 655, 769, 984
StyI CCWWGG 2 cut(s) 293, 369
TaaI ACNGT 2 cut(s) 628, 747
TaiI ACGT 2 cut(s) 117, 871
TaqI TCGA 3 cut(s) 268, 573, 886
TasI AATT 3 cut(s) 468, 603, 929
TfiI GAWTC 1 cut(s) 968
Tru1I TTAA 1 cut(s) 198
Tru9I TTAA 1 cut(s) 198
TseI GCWGC 2 cut(s) 23, 1081
TspDTI ATGAA 5 cut(s) 157, 606, 653, 1037, 1148
TspGWI ACGGA 2 cut(s) 249, 869
Van91I CCANNNNNTGG 1 cut(s) 770
VpaK11BI GGWCC 2 cut(s) 615, 988
XceI RCATGY 3 cut(s) 428, 689, 827
XspI CTAG 7 cut(s) 27, 32, 323, 365, 690, 723, 1071
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.