Rmu_sc0002358.1_g000013

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002358.1
OG0000187
Physical Location & Seq
Reverse (-)
51554 .. 52732
1179 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002358.1_g000013.1.cds

Sequence Viewer

Length: 1179 bp
atgtcttctgttaatgcaatggctggtagactagcctcctctcttgctatcgctgaaggcaagaggcaaattgatttgcgacctacgcagggcaagggtttgcgccaggaaaatgtattcttggtgggcaagctcctcaccgctcgggatttcaaggtcaagtcttttatggggatgtttcgcaacgcctggagggttaatgggtcgttgcaggtggaggaagcagaagggcagagagtgttattcacgctgtcggatctgtctgatcgagttcggatatggcggggtgccccatgggggtataatcacgcgccggtggctctagctttgtatgatggtatcatgccggtggagaaagtgcccctagccatggcatcatattggataactcttcagggaataccaccagcgttctggtctgaacgtgtcatgaccatgattggctacacgctgggggatttgcaggaaattgataagaatgctaagaagactgggaaactccggattacggttgagataccgctgaataaaccattgcctttcaagcggtggtatttggtggaatatgaagtcgagtttcgctgtcaattccgttatgacaagcttttcgggagattctctgtatgtggattagtcacacatgtgggtttgccatgctccggaccggcgctggatgaagacgatgatgaagccgagagaattgttttggggtcccagaacacggtgttggagatgaacggtgggggctcgctgggagtttgggcggggtcaacatccgggcatgctagtagcagtgggctcaatactggtgtaagagatagcgttaccacccggtgtccaccgttggtatttcggactccatatcctggtccgagtggggagccatgtttgaatgctttgtttccaaagcagaagcgacagcttgtggtgcgtgaacttcaggggacagcggaaactccagaacacatcactggcaagcgtcgagacagagaagaaagcctgactatctcccctaagaaactgaaattgagtttggaggtaggtaagagaaaccttattcttgattctgaaaatcttggcctggaccttatacaggaggagactcattatgggagtatgaagcagaagcgaggacgaccttttggcagtagaaataagtcgtcgtctggtggcaagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

392

Amino Acids

43.51

Weight (kDa)

9.45

Isoelectric Point (pI)

44.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Style Settings
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Publication-ready
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Orthologous Genes (Group: OG0000187)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20170 FvH4_4g06831
rosa_chinensis RchiOBHm_Chr1g0321991 RchiOBHm_Chr2g0161811
rosa_laevigata RLG00000015375 RLG00000018377
rosa_multiflora Rmu_co8011754.1_g000001 Rmu_co8019986.1_g000001 Rmu_co8067766.1_g000001 Rmu_co8156128.1_g000001 Rmu_co8219154.1_g000003 Rmu_co8297235.1_g000001 Rmu_co8345223.1_g000001 Rmu_co8364775.1_g000001 Rmu_co8465075.1_g000001 Rmu_sc0000007.1_g000002 Rmu_sc0000054.1_g000015 Rmu_sc0000054.1_g000023 Rmu_sc0000145.1_g000010 Rmu_sc0000166.1_g000006 Rmu_sc0000218.1_g000012 Rmu_sc0000339.1_g000008 Rmu_sc0000342.1_g000015 Rmu_sc0000464.1_g000008 Rmu_sc0000620.1_g000003 Rmu_sc0000638.1_g000017 Rmu_sc0000890.1_g000007 Rmu_sc0000894.1_g000024 Rmu_sc0000909.1_g000010 Rmu_sc0000928.1_g000020 Rmu_sc0000977.1_g000007 Rmu_sc0001022.1_g000003 Rmu_sc0001035.1_g000037 Rmu_sc0001060.1_g000008 Rmu_sc0001168.1_g000005 Rmu_sc0001173.1_g000022 Rmu_sc0001179.1_g000016 Rmu_sc0001408.1_g000003 Rmu_sc0001455.1_g000005 Rmu_sc0001484.1_g000008 Rmu_sc0001585.1_g000010 Rmu_sc0001702.1_g000030 Rmu_sc0001755.1_g000063 Rmu_sc0001903.1_g000009 Rmu_sc0002099.1_g000001 Rmu_sc0002142.1_g000012 Rmu_sc0002158.1_g000014 Rmu_sc0002307.1_g000009 Rmu_sc0002358.1_g000013 Rmu_sc0002421.1_g000002 Rmu_sc0002426.1_g000003 Rmu_sc0002438.1_g000001 Rmu_sc0002461.1_g000001 Rmu_sc0002508.1_g000003 Rmu_sc0002532.1_g000056 Rmu_sc0002583.1_g000002 Rmu_sc0002927.1_g000033 Rmu_sc0003033.1_g000040 Rmu_sc0003271.1_g000006 Rmu_sc0003381.1_g000006 Rmu_sc0003507.1_g000007 Rmu_sc0003578.1_g000003 Rmu_sc0003693.1_g000004 Rmu_sc0003693.1_g000005 Rmu_sc0003704.1_g000003 Rmu_sc0003840.1_g000002 Rmu_sc0004084.1_g000026 Rmu_sc0004193.1_g000007 Rmu_sc0004234.1_g000033 Rmu_sc0004235.1_g000025 Rmu_sc0004435.1_g000006 Rmu_sc0004727.1_g000003 Rmu_sc0004741.1_g000001 Rmu_sc0004926.1_g000004 Rmu_sc0005365.1_g000001 Rmu_sc0005392.1_g000007 Rmu_sc0005415.1_g000001 Rmu_sc0005539.1_g000007 Rmu_sc0005708.1_g000017 Rmu_sc0006317.1_g000007 Rmu_sc0006453.1_g000054 Rmu_sc0006536.1_g000004 Rmu_sc0006740.1_g000022 Rmu_sc0006763.1_g000012 Rmu_sc0007115.1_g000002 Rmu_sc0007115.1_g000010 Rmu_sc0007129.1_g000017 Rmu_sc0007131.1_g000010 Rmu_sc0008373.1_g000008 Rmu_sc0009005.1_g000008 Rmu_sc0009252.1_g000007 Rmu_sc0009599.1_g000022 Rmu_sc0009785.1_g000027 Rmu_sc0009891.1_g000003 Rmu_sc0010099.1_g000010 Rmu_sc0010266.1_g000008 Rmu_sc0010334.1_g000003 Rmu_sc0010381.1_g000001 Rmu_sc0010496.1_g000003 Rmu_sc0010496.1_g000004 Rmu_sc0010546.1_g000003 Rmu_sc0011482.1_g000006 Rmu_sc0011875.1_g000010 Rmu_sc0011917.1_g000006 Rmu_sc0012293.1_g000004 Rmu_sc0012847.1_g000003 Rmu_sc0013773.1_g000001 Rmu_sc0016060.1_g000003 Rmu_sc0016170.1_g000013 Rmu_sc0016393.1_g000002 Rmu_sc0017589.1_g000001 Rmu_sc0017786.1_g000005 Rmu_sc0018326.1_g000002 Rmu_sc0020760.1_g000001 Rmu_sc0021262.1_g000003 Rmu_sc0023851.1_g000002 Rmu_sc0024044.1_g000001 Rmu_sc0026820.1_g000001 Rmu_sc0032306.1_g000001 Rmu_sc0035666.1_g000001 Rmu_sc0036881.1_g000001 Rmu_sc0037030.1_g000001 Rmu_sc0037158.1_g000001 Rmu_ssc0000016.1_g000002 Rmu_ssc0000044.1_g000012 Rmu_ssc0000044.1_g000014 Rmu_ssc0000050.1_g000064 Rmu_ssc0000064.1_g000022 Rmu_ssc0000154.1_g000037 Rmu_ssc0000178.1_g000013 Rmu_ssc0000217.1_g000022 Rmu_ssc0000392.1_g000004
rosa_roxburghii Rroxscaffold_3G00242000 Rroxscaffold_3G00242530 Rroxscaffold_6G00406010
rosa_rugosa Rorug01G0062000 Rorug02G0224000 Rorug02G0262900 Rorug02G0263000 Rorug02G0358900 Rorug02G0360500 Rorug02G0378500.1 Rorug02G0378600 Rorug02G0394700 Rorug03G0122900 Rorug03G0254600 Rorug03G0254700 Rorug03G0254800 Rorug04G0042200.1 Rorug04G0378100 Rorug05G0053400 Rorug05G0238600 Rorug05G0364500 Rorug05G0562000 Rorug06G0089300 Rorug06G0089400 Rorug06G0145700 Rorug07G0111600 Rorug07G0229500.1 Rorug07G0287600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 202
Acc36I ACCTGC 1 cut(s) 202
AccB1I GGYRCC 1 cut(s) 287
AccB7I CCANNNNNTGG 1 cut(s) 866
AccBSI CCGCTC 1 cut(s) 143
AccI GTMKAC 1 cut(s) 28
AccII CGCG 1 cut(s) 311
AccIII TCCGGA 2 cut(s) 501, 659
AciI CCGC 6 cut(s) 141, 283, 521, 547, 764, 950
AclWI GGATC 1 cut(s) 264
AcuI CTGAAG 3 cut(s) 75, 377, 923
AdeI CACNNNGTG 1 cut(s) 834
AfiI CCNNNNNNNGG 8 cut(s) 89, 297, 370, 508, 659, 721, 866, 1093
AflIII ACRYGT 2 cut(s) 424, 640
AgsI TTSAA 3 cut(s) 154, 544, 892
AjnI CCWGG 4 cut(s) 105, 188, 865, 1080
AjuI GAANNNNNNNTTGG 4 cut(s) 710, 742, 1016, 1048
AleI CACNNNNGTG 1 cut(s) 641
AluBI AGCT 4 cut(s) 133, 326, 604, 922
AluI AGCT 4 cut(s) 133, 326, 604, 922
Alw26I GTCTC 2 cut(s) 978, 1094
AlwI GGATC 1 cut(s) 264
Ama87I CYCGRG 1 cut(s) 144
Aor13HI TCCGGA 2 cut(s) 501, 659
AoxI GGCC 1 cut(s) 1078
ArsI GACNNNNNNTTYG 2 cut(s) 590, 622
AspLEI GCGC 3 cut(s) 105, 313, 670
AspS9I GGNCC 4 cut(s) 662, 711, 869, 1084
AsuC2I CCSGG 2 cut(s) 778, 832
AsuHPI GGTGA 1 cut(s) 130
AvaI CYCGRG 1 cut(s) 144
AvaII GGWCC 4 cut(s) 662, 711, 869, 1084
BaeGI GKGCMC 2 cut(s) 292, 363
BanI GGYRCC 1 cut(s) 287
BanII GRGCYC 2 cut(s) 749, 801
BbsI GAAGAC 2 cut(s) 494, 684
BccI CCATC 1 cut(s) 329
BciT130I CCWGG 4 cut(s) 107, 190, 867, 1082
BcnI CCSGG 2 cut(s) 778, 832
BcoDI GTCTC 2 cut(s) 978, 1094
BfaI CTAG 4 cut(s) 32, 323, 365, 786
BfoI RGCGCY 1 cut(s) 671
BfuAI ACCTGC 1 cut(s) 202
Bme1390I CCNGG 6 cut(s) 107, 190, 778, 832, 867, 1082
Bme18I GGWCC 4 cut(s) 662, 711, 869, 1084
BmeT110I CYCGRG 1 cut(s) 144
BmgT120I GGNCC 4 cut(s) 662, 711, 869, 1084
BmiI GGNNCC 4 cut(s) 289, 712, 713, 882
BmrFI CCNGG 6 cut(s) 107, 190, 778, 832, 867, 1082
BmrI ACTGGG 1 cut(s) 501
BmsI GCATC 1 cut(s) 383
BmuI ACTGGG 1 cut(s) 501
BpiI GAAGAC 2 cut(s) 494, 684
BpmI CTGGAG 2 cut(s) 211, 942
BpuMI CCSGG 2 cut(s) 778, 832
BsaJI CCNNGG 2 cut(s) 293, 369
BsaWI WCCGGW 2 cut(s) 501, 659
Bsc4I CCNNNNNNNGG 8 cut(s) 89, 297, 370, 508, 659, 721, 866, 1093
Bse118I RCCGGY 3 cut(s) 313, 346, 664
Bse1I ACTGG 3 cut(s) 496, 811, 976
Bse3DI GCAATG 2 cut(s) 24, 533
BseAI TCCGGA 2 cut(s) 501, 659
BseBI CCWGG 4 cut(s) 107, 190, 867, 1082
BseDI CCNNGG 2 cut(s) 293, 369
BseGI GGATG 3 cut(s) 180, 679, 773
BseLI CCNNNNNNNGG 8 cut(s) 89, 297, 370, 508, 659, 721, 866, 1093
BseMI GCAATG 2 cut(s) 24, 533
BseNI ACTGG 3 cut(s) 496, 811, 976
BseRI GAGGAG 3 cut(s) 28, 125, 1112
BseSI GKGCMC 2 cut(s) 292, 363
BseYI CCCAGC 2 cut(s) 451, 751
Bsh1236I CGCG 1 cut(s) 311
BshFI GGCC 1 cut(s) 1080
BshNI GGYRCC 1 cut(s) 287
BsiHKCI CYCGRG 1 cut(s) 144
BsiSI CCGG 7 cut(s) 314, 347, 502, 660, 665, 777, 832
BslFI GGGAC 2 cut(s) 697, 958
BslI CCNNNNNNNGG 8 cut(s) 89, 297, 370, 508, 659, 721, 866, 1093
BsmAI GTCTC 2 cut(s) 978, 1094
BsmFI GGGAC 2 cut(s) 697, 958
BsmI GAATGC 2 cut(s) 484, 898
BsnI GGCC 1 cut(s) 1080
BsoBI CYCGRG 1 cut(s) 144
Bsp1286I GDGCHC 4 cut(s) 292, 363, 749, 801
Bsp13I TCCGGA 2 cut(s) 501, 659
Bsp143I GATC 2 cut(s) 256, 265
Bsp19I CCATGG 2 cut(s) 293, 369
BspACI CCGC 6 cut(s) 141, 283, 521, 547, 764, 950
BspANI GGCC 1 cut(s) 1080
BspEI TCCGGA 2 cut(s) 501, 659
BspFNI CGCG 1 cut(s) 311
BspHI TCATGA 1 cut(s) 429
BspLI GGNNCC 4 cut(s) 289, 712, 713, 882
BspMI ACCTGC 1 cut(s) 202
BspPI GGATC 1 cut(s) 264
BspT107I GGYRCC 1 cut(s) 287
BsrBI CCGCTC 1 cut(s) 143
BsrDI GCAATG 2 cut(s) 24, 533
BsrFI RCCGGY 3 cut(s) 313, 346, 664
BsrI ACTGG 3 cut(s) 496, 811, 976
BssAI RCCGGY 3 cut(s) 313, 346, 664
BssECI CCNNGG 2 cut(s) 293, 369
BssMI GATC 2 cut(s) 256, 265
BssT1I CCWWGG 2 cut(s) 293, 369
Bst2UI CCWGG 4 cut(s) 107, 190, 867, 1082
Bst4CI ACNGT 4 cut(s) 511, 724, 740, 843
Bst6I CTCTTC 1 cut(s) 396
BstC8I GCNNGC 4 cut(s) 131, 749, 783, 977
BstDEI CTNAG 2 cut(s) 483, 1014
BstDSI CCRYGG 2 cut(s) 293, 369
BstENI CCTNNNNNAGG 1 cut(s) 1091
BstF5I GGATG 3 cut(s) 180, 679, 773
BstFNI CGCG 1 cut(s) 311
BstH2I RGCGCY 1 cut(s) 671
BstHHI GCGC 3 cut(s) 105, 313, 670
BstKTI GATC 2 cut(s) 259, 268
BstMAI GTCTC 2 cut(s) 978, 1094
BstMBI GATC 2 cut(s) 256, 265
BstMWI GCNNNNNNNGC 4 cut(s) 85, 317, 544, 928
BstNI CCWGG 4 cut(s) 107, 190, 867, 1082
BstNSI RCATGY 2 cut(s) 644, 785
BstSCI CCNGG 6 cut(s) 105, 188, 776, 830, 865, 1080
BstSLI GKGCMC 2 cut(s) 292, 363
BstUI CGCG 1 cut(s) 311
BstV2I GAAGAC 2 cut(s) 494, 684
BstX2I RGATCY 1 cut(s) 256
BstXI CCANNNNNNTGG 1 cut(s) 414
BstYI RGATCY 1 cut(s) 256
BsuRI GGCC 1 cut(s) 1080
BtgI CCRYGG 2 cut(s) 293, 369
BtsCI GGATG 3 cut(s) 180, 679, 773
BtsI GCAGTG 1 cut(s) 799
BtsIMutI CAGTG 2 cut(s) 799, 969
BveI ACCTGC 1 cut(s) 202
Cac8I GCNNGC 4 cut(s) 131, 749, 783, 977
CciI TCATGA 1 cut(s) 429
CfoI GCGC 3 cut(s) 105, 313, 670
Cfr10I RCCGGY 3 cut(s) 313, 346, 664
Cfr13I GGNCC 4 cut(s) 662, 711, 869, 1084
CpoI CGGWCCG 1 cut(s) 662
CseI GACGC 1 cut(s) 968
CspI CGGWCCG 1 cut(s) 662
CviAII CATG 9 cut(s) 294, 343, 370, 430, 436, 641, 654, 782, 885
DdeI CTNAG 2 cut(s) 483, 1014
DpnI GATC 2 cut(s) 258, 267
DpnII GATC 2 cut(s) 256, 265
DraIII CACNNNGTG 1 cut(s) 834
Eam1104I CTCTTC 1 cut(s) 396
EarI CTCTTC 1 cut(s) 396
Eco130I CCWWGG 2 cut(s) 293, 369
Eco24I GRGCYC 2 cut(s) 749, 801
Eco47I GGWCC 4 cut(s) 662, 711, 869, 1084
Eco57I CTGAAG 3 cut(s) 75, 377, 923
Eco88I CYCGRG 1 cut(s) 144
EcoNI CCTNNNNNAGG 1 cut(s) 1091
EcoO109I RGGNCCY 1 cut(s) 711
EcoRII CCWGG 4 cut(s) 105, 188, 865, 1080
EcoT14I CCWWGG 2 cut(s) 293, 369
EcoT38I GRGCYC 2 cut(s) 749, 801
ErhI CCWWGG 2 cut(s) 293, 369
FaeI CATG 9 cut(s) 297, 346, 373, 433, 439, 644, 657, 785, 888
FaqI GGGAC 2 cut(s) 697, 958
FatI CATG 9 cut(s) 293, 342, 369, 429, 435, 640, 653, 781, 884
FauI CCCGC 2 cut(s) 276, 757
FblI GTMKAC 1 cut(s) 28
FokI GGATG 3 cut(s) 187, 686, 760
FriOI GRGCYC 2 cut(s) 749, 801
FspBI CTAG 4 cut(s) 32, 323, 365, 786
GlaI GCGC 3 cut(s) 104, 312, 669
GsaI CCCAGC 2 cut(s) 455, 755
GsuI CTGGAG 2 cut(s) 211, 942
HaeII RGCGCY 1 cut(s) 671
HaeIII GGCC 1 cut(s) 1080
HapII CCGG 7 cut(s) 314, 347, 502, 660, 665, 777, 832
HgaI GACGC 1 cut(s) 968
HhaI GCGC 3 cut(s) 105, 313, 670
Hin1II CATG 9 cut(s) 297, 346, 373, 433, 439, 644, 657, 785, 888
Hin6I GCGC 3 cut(s) 103, 311, 668
HinP1I GCGC 3 cut(s) 103, 311, 668
HincII GTYRAC 1 cut(s) 771
HindII GTYRAC 1 cut(s) 771
HindIII AAGCTT 1 cut(s) 602
HinfI GANTC 4 cut(s) 615, 856, 1064, 1102
HpaII CCGG 7 cut(s) 314, 347, 502, 660, 665, 777, 832
HphI GGTGA 1 cut(s) 130
Hpy166II GTNNAC 4 cut(s) 29, 771, 839, 935
Hpy188I TCNGA 7 cut(s) 256, 265, 276, 421, 855, 873, 1069
Hpy188III TCNNGA 8 cut(s) 146, 430, 502, 610, 660, 959, 983, 1061
Hpy8I GTNNAC 4 cut(s) 29, 771, 839, 935
Hpy99I CGWCG 2 cut(s) 984, 1165
HpyAV CCTTC 2 cut(s) 50, 221
HpyCH4III ACNGT 4 cut(s) 511, 724, 740, 843
HpyCH4IV ACGT 1 cut(s) 424
HpyCH4V TGCA 3 cut(s) 17, 211, 463
HpyF10VI GCNNNNNNNGC 4 cut(s) 85, 317, 544, 928
HpyF3I CTNAG 2 cut(s) 483, 1014
HpySE526I ACGT 1 cut(s) 424
Hsp92II CATG 9 cut(s) 297, 346, 373, 433, 439, 644, 657, 785, 888
HspAI GCGC 3 cut(s) 103, 311, 668
KflI GGGWCCC 1 cut(s) 711
Kpn2I TCCGGA 2 cut(s) 501, 659
Kzo9I GATC 2 cut(s) 256, 265
LmnI GCTCC 3 cut(s) 138, 662, 880
LweI GCATC 1 cut(s) 383
MaeI CTAG 4 cut(s) 32, 323, 365, 786
MaeII ACGT 1 cut(s) 424
MaeIII GTNAC 2 cut(s) 634, 823
MalI GATC 2 cut(s) 258, 267
MbiI CCGCTC 1 cut(s) 143
MboI GATC 2 cut(s) 256, 265
MboII GAAGA 4 cut(s) 383, 499, 689, 1004
MflI RGATCY 1 cut(s) 256
MhlI GDGCHC 4 cut(s) 292, 363, 749, 801
MluCI AATT 5 cut(s) 69, 468, 587, 699, 1025
MlyI GAGTC 2 cut(s) 850, 1096
MmeI TCCRAC 2 cut(s) 234, 708
MnlI CCTC 9 cut(s) 46, 49, 57, 146, 186, 211, 1030, 1090, 1124
MroI TCCGGA 2 cut(s) 501, 659
MseI TTAA 2 cut(s) 12, 198
MslI CAYNNNNRTG 3 cut(s) 347, 434, 641
MspA1I CMGCKG 2 cut(s) 523, 950
MspI CCGG 7 cut(s) 314, 347, 502, 660, 665, 777, 832
MspR9I CCNGG 6 cut(s) 107, 190, 778, 832, 867, 1082
Mva1269I GAATGC 2 cut(s) 484, 898
MvaI CCWGG 4 cut(s) 107, 190, 867, 1082
MvnI CGCG 1 cut(s) 311
MwoI GCNNNNNNNGC 4 cut(s) 85, 317, 544, 928
NciI CCSGG 2 cut(s) 778, 832
NcoI CCATGG 2 cut(s) 293, 369
NdeII GATC 2 cut(s) 256, 265
NlaIII CATG 9 cut(s) 297, 346, 373, 433, 439, 644, 657, 785, 888
NlaIV GGNNCC 4 cut(s) 289, 712, 713, 882
NmeAIII GCCGAG 1 cut(s) 718
NmuCI GTSAC 1 cut(s) 634
NspI RCATGY 2 cut(s) 644, 785
OliI CACNNNNGTG 1 cut(s) 641
PaeI GCATGC 1 cut(s) 785
PagI TCATGA 1 cut(s) 429
PaqCI CACCTGC 1 cut(s) 202
PciI ACATGT 1 cut(s) 640
PctI GAATGC 2 cut(s) 484, 898
PfeI GAWTC 2 cut(s) 615, 1064
PflMI CCANNNNNTGG 1 cut(s) 866
PleI GAGTC 2 cut(s) 850, 1096
PpsI GAGTC 2 cut(s) 850, 1096
PpuMI RGGWCCY 1 cut(s) 711
PscI ACATGT 1 cut(s) 640
Psp5II RGGWCCY 1 cut(s) 711
Psp6I CCWGG 4 cut(s) 105, 188, 865, 1080
PspFI CCCAGC 2 cut(s) 451, 751
PspGI CCWGG 4 cut(s) 105, 188, 865, 1080
PspN4I GGNNCC 4 cut(s) 289, 712, 713, 882
PspPI GGNCC 4 cut(s) 662, 711, 869, 1084
PspPPI RGGWCCY 1 cut(s) 711
PsuI RGATCY 1 cut(s) 256
RseI CAYNNNNRTG 3 cut(s) 347, 434, 641
Rsr2I CGGWCCG 1 cut(s) 662
RsrII CGGWCCG 1 cut(s) 662
SaqAI TTAA 2 cut(s) 12, 198
Sau3AI GATC 2 cut(s) 256, 265
Sau96I GGNCC 4 cut(s) 662, 711, 869, 1084
SchI GAGTC 2 cut(s) 850, 1096
ScrFI CCNGG 6 cut(s) 107, 190, 778, 832, 867, 1082
SduI GDGCHC 4 cut(s) 292, 363, 749, 801
SfaNI GCATC 1 cut(s) 383
SgrAI CRCCGGYG 1 cut(s) 313
SinI GGWCC 4 cut(s) 662, 711, 869, 1084
SmiMI CAYNNNNRTG 3 cut(s) 347, 434, 641
SphI GCATGC 1 cut(s) 785
Sse9I AATT 5 cut(s) 69, 468, 587, 699, 1025
SsiI CCGC 6 cut(s) 141, 283, 521, 547, 764, 950
SspMI CTAG 4 cut(s) 32, 323, 365, 786
StyD4I CCNGG 6 cut(s) 105, 188, 776, 830, 865, 1080
StyI CCWWGG 2 cut(s) 293, 369
TaaI ACNGT 4 cut(s) 511, 724, 740, 843
TaiI ACGT 1 cut(s) 427
TaqI TCGA 3 cut(s) 268, 573, 982
TasI AATT 5 cut(s) 69, 468, 587, 699, 1025
TfiI GAWTC 2 cut(s) 615, 1064
Tru1I TTAA 2 cut(s) 12, 198
Tru9I TTAA 2 cut(s) 12, 198
TscAI CASTG 2 cut(s) 799, 976
TseFI GTSAC 1 cut(s) 634
Tsp45I GTSAC 1 cut(s) 634
TspDTI ATGAA 5 cut(s) 582, 690, 702, 749, 1133
TspGWI ACGGA 1 cut(s) 581
TspRI CASTG 2 cut(s) 799, 976
Van91I CCANNNNNTGG 1 cut(s) 866
VpaK11BI GGWCC 4 cut(s) 662, 711, 869, 1084
XagI CCTNNNNNAGG 1 cut(s) 1091
XceI RCATGY 2 cut(s) 644, 785
XcmI CCANNNNNNNNNTGG 1 cut(s) 411
XmiI GTMKAC 1 cut(s) 28
XspI CTAG 4 cut(s) 32, 323, 365, 786
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.