Rmu_sc0001035.1_g000037

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001035.1
OG0000187
Physical Location & Seq
Forward (+)
175082 .. 178808
3727 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001035.1_g000037.1.cds

Sequence Viewer

Length: 1491 bp
atgttgtggtggcatcttggcaagggcggaaaggtggcttcccggtggcggatttgcgacttccggataccgccgcgtagcctgaacatagggctacacgatgcatgtctcgacgaggtcgtgccggtgattgttgggttgctggaagtgctggtgatcgacgctgagagaggaggccggagccgtgcgctgcaggtgggagcccggactcaagtctggaggctgaggcagggtgtgcagcactggacagaggctgggggcggcaagaggcagattgatttgggcccaacacagggccaaggtttgagacaagcaaatgtgttcttggtcggcaaacttctcacagcccacgactacaagatcaagtctttcatggggatgttctgcaacgcctggaggattaatggagcgttgcaagtggacgaagcggaggagcagagggtgcttttcacgctgtcgaaccctgcgaatcaagtgcgggtttggcgtggtgcgccatggggttataaccgtgctccagtggcgttggcgtggtatgacggcatcatgcaggttgcaaaagtccccctgaacatggcgtcctattggatcaccctccaagagatcccgccggcgttccggtcagaaaaagttatggctatgattggctacaccttggggtattttcaagagatcgacaagaatgccaagaaggccgagaagcttcaaattagggatgaagttgaatttcggtgcaagttccggtatgataagctgtttgggcggtgttccacttgtggccttgtaactcacgttggactgccgtactcagggccggcgctggatgaggatgatgatgatgctgagtggactgtgttggggtccggaggcgactggtggactccagttcctggtctaattggagagccctcgttgagtgccttgttttcgaagaaaaagcagcagatgatggtgcgtgacctccaagaaacagtcgaaattgtagagcacctcacaggcaaacgtcatggacgtgaagatggcttgaccatctcccataagaagttgaaattgagtttggctgtgggtaagaaaaatctcattctggattctgaaaaccttggattggatccggtcttgcaagtagagtccacttctggcagcatgaagaagaagaaaggacgacctactagtagtaaaaatagatcatcttctggtgacaagactatggcttcaaagcatgaggaaggccatgcacagcaaaggtctcccaataggaagcagtctatggctccgccccccgtgacctgcaacctgcaccccatacgcaccagcccgccagcctacctcacttcctacttcccgcacgcacgcctgcgctcgctactgcctggcagcgtcccccccaagcctcgctgctgcccagcgctgaacctgctgctaccctgcgctgagcctgctgctgccactagctgctgctacctcgaattgttgttgctgctgcttccctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

496

Amino Acids

55.19

Weight (kDa)

9.34

Isoelectric Point (pI)

45.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000187)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20170 FvH4_4g06831
rosa_chinensis RchiOBHm_Chr1g0321991 RchiOBHm_Chr2g0161811
rosa_laevigata RLG00000015375 RLG00000018377
rosa_multiflora Rmu_co8011754.1_g000001 Rmu_co8019986.1_g000001 Rmu_co8067766.1_g000001 Rmu_co8156128.1_g000001 Rmu_co8219154.1_g000003 Rmu_co8297235.1_g000001 Rmu_co8345223.1_g000001 Rmu_co8364775.1_g000001 Rmu_co8465075.1_g000001 Rmu_sc0000007.1_g000002 Rmu_sc0000054.1_g000015 Rmu_sc0000054.1_g000023 Rmu_sc0000145.1_g000010 Rmu_sc0000166.1_g000006 Rmu_sc0000218.1_g000012 Rmu_sc0000339.1_g000008 Rmu_sc0000342.1_g000015 Rmu_sc0000464.1_g000008 Rmu_sc0000620.1_g000003 Rmu_sc0000638.1_g000017 Rmu_sc0000890.1_g000007 Rmu_sc0000894.1_g000024 Rmu_sc0000909.1_g000010 Rmu_sc0000928.1_g000020 Rmu_sc0000977.1_g000007 Rmu_sc0001022.1_g000003 Rmu_sc0001035.1_g000037 Rmu_sc0001060.1_g000008 Rmu_sc0001168.1_g000005 Rmu_sc0001173.1_g000022 Rmu_sc0001179.1_g000016 Rmu_sc0001408.1_g000003 Rmu_sc0001455.1_g000005 Rmu_sc0001484.1_g000008 Rmu_sc0001585.1_g000010 Rmu_sc0001702.1_g000030 Rmu_sc0001755.1_g000063 Rmu_sc0001903.1_g000009 Rmu_sc0002099.1_g000001 Rmu_sc0002142.1_g000012 Rmu_sc0002158.1_g000014 Rmu_sc0002307.1_g000009 Rmu_sc0002358.1_g000013 Rmu_sc0002421.1_g000002 Rmu_sc0002426.1_g000003 Rmu_sc0002438.1_g000001 Rmu_sc0002461.1_g000001 Rmu_sc0002508.1_g000003 Rmu_sc0002532.1_g000056 Rmu_sc0002583.1_g000002 Rmu_sc0002927.1_g000033 Rmu_sc0003033.1_g000040 Rmu_sc0003271.1_g000006 Rmu_sc0003381.1_g000006 Rmu_sc0003507.1_g000007 Rmu_sc0003578.1_g000003 Rmu_sc0003693.1_g000004 Rmu_sc0003693.1_g000005 Rmu_sc0003704.1_g000003 Rmu_sc0003840.1_g000002 Rmu_sc0004084.1_g000026 Rmu_sc0004193.1_g000007 Rmu_sc0004234.1_g000033 Rmu_sc0004235.1_g000025 Rmu_sc0004435.1_g000006 Rmu_sc0004727.1_g000003 Rmu_sc0004741.1_g000001 Rmu_sc0004926.1_g000004 Rmu_sc0005365.1_g000001 Rmu_sc0005392.1_g000007 Rmu_sc0005415.1_g000001 Rmu_sc0005539.1_g000007 Rmu_sc0005708.1_g000017 Rmu_sc0006317.1_g000007 Rmu_sc0006453.1_g000054 Rmu_sc0006536.1_g000004 Rmu_sc0006740.1_g000022 Rmu_sc0006763.1_g000012 Rmu_sc0007115.1_g000002 Rmu_sc0007115.1_g000010 Rmu_sc0007129.1_g000017 Rmu_sc0007131.1_g000010 Rmu_sc0008373.1_g000008 Rmu_sc0009005.1_g000008 Rmu_sc0009252.1_g000007 Rmu_sc0009599.1_g000022 Rmu_sc0009785.1_g000027 Rmu_sc0009891.1_g000003 Rmu_sc0010099.1_g000010 Rmu_sc0010266.1_g000008 Rmu_sc0010334.1_g000003 Rmu_sc0010381.1_g000001 Rmu_sc0010496.1_g000003 Rmu_sc0010496.1_g000004 Rmu_sc0010546.1_g000003 Rmu_sc0011482.1_g000006 Rmu_sc0011875.1_g000010 Rmu_sc0011917.1_g000006 Rmu_sc0012293.1_g000004 Rmu_sc0012847.1_g000003 Rmu_sc0013773.1_g000001 Rmu_sc0016060.1_g000003 Rmu_sc0016170.1_g000013 Rmu_sc0016393.1_g000002 Rmu_sc0017589.1_g000001 Rmu_sc0017786.1_g000005 Rmu_sc0018326.1_g000002 Rmu_sc0020760.1_g000001 Rmu_sc0021262.1_g000003 Rmu_sc0023851.1_g000002 Rmu_sc0024044.1_g000001 Rmu_sc0026820.1_g000001 Rmu_sc0032306.1_g000001 Rmu_sc0035666.1_g000001 Rmu_sc0036881.1_g000001 Rmu_sc0037030.1_g000001 Rmu_sc0037158.1_g000001 Rmu_ssc0000016.1_g000002 Rmu_ssc0000044.1_g000012 Rmu_ssc0000044.1_g000014 Rmu_ssc0000050.1_g000064 Rmu_ssc0000064.1_g000022 Rmu_ssc0000154.1_g000037 Rmu_ssc0000178.1_g000013 Rmu_ssc0000217.1_g000022 Rmu_ssc0000392.1_g000004
rosa_roxburghii Rroxscaffold_3G00242000 Rroxscaffold_3G00242530 Rroxscaffold_6G00406010
rosa_rugosa Rorug01G0062000 Rorug02G0224000 Rorug02G0262900 Rorug02G0263000 Rorug02G0358900 Rorug02G0360500 Rorug02G0378500.1 Rorug02G0378600 Rorug02G0394700 Rorug03G0122900 Rorug03G0254600 Rorug03G0254700 Rorug03G0254800 Rorug04G0042200.1 Rorug04G0378100 Rorug05G0053400 Rorug05G0238600 Rorug05G0364500 Rorug05G0562000 Rorug06G0089300 Rorug06G0089400 Rorug06G0145700 Rorug07G0111600 Rorug07G0229500.1 Rorug07G0287600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 507
AarI CACCTGC 1 cut(s) 184
Acc36I ACCTGC 5 cut(s) 184, 541, 1295, 1302, 1422
AccB7I CCANNNNNTGG 1 cut(s) 890
AccII CGCG 1 cut(s) 76
AccIII TCCGGA 2 cut(s) 63, 863
AclWI GGATC 4 cut(s) 596, 598, 1103, 1116
AcsI RAATTY 1 cut(s) 725
AcyI GRCGYC 1 cut(s) 578
AfaI GTAC 1 cut(s) 806
AfeI AGCGCT 1 cut(s) 1407
AfiI CCNNNNNNNGG 7 cut(s) 48, 292, 293, 574, 809, 890, 1105
AgsI TTSAA 5 cut(s) 668, 707, 725, 1048, 1215
AhlI ACTAGT 1 cut(s) 1169
AjiI CACGTC 1 cut(s) 1013
AjnI CCWGG 3 cut(s) 392, 889, 1369
AjuI GAANNNNNNNTTGG 2 cut(s) 1040, 1072
AloI GAACNNNNNNTCC 2 cut(s) 563, 595
AluBI AGCT 3 cut(s) 703, 754, 1452
AluI AGCT 3 cut(s) 703, 754, 1452
Alw21I GWGCWC 2 cut(s) 517, 990
Alw26I GTCTC 3 cut(s) 113, 301, 1251
AlwI GGATC 4 cut(s) 596, 598, 1103, 1116
AlwNI CAGNNNCTG 2 cut(s) 254, 890
Aor13HI TCCGGA 2 cut(s) 63, 863
Aor51HI AGCGCT 1 cut(s) 1407
AoxI GGCC 7 cut(s) 175, 283, 295, 693, 778, 812, 1228
ApaI GGGCCC 1 cut(s) 287
ApoI RAATTY 1 cut(s) 725
AseI ATTAAT 1 cut(s) 402
AspLEI GCGC 6 cut(s) 190, 496, 820, 1359, 1408, 1430
AspS9I GGNCC 5 cut(s) 283, 284, 295, 812, 861
AsuC2I CCSGG 2 cut(s) 43, 205
AsuHPI GGTGA 4 cut(s) 139, 166, 583, 1208
AsuII TTCGAA 1 cut(s) 929
AvaII GGWCC 1 cut(s) 861
BaeGI GKGCMC 1 cut(s) 287
BamHI GGATCC 1 cut(s) 1108
BanII GRGCYC 3 cut(s) 205, 287, 909
Bbv12I GWGCWC 2 cut(s) 517, 990
BbvCI CCTCAGC 1 cut(s) 224
BccI CCATC 3 cut(s) 943, 1013, 1037
BceAI ACGGC 3 cut(s) 168, 556, 787
BcgI CGANNNNNNTGC 4 cut(s) 457, 491, 665, 699
BciT130I CCWGG 3 cut(s) 394, 891, 1371
BciVI GTATCC 1 cut(s) 60
BcnI CCSGG 2 cut(s) 43, 205
BcoDI GTCTC 3 cut(s) 113, 301, 1251
BcuI ACTAGT 1 cut(s) 1169
BfaI CTAG 2 cut(s) 1170, 1449
BfmI CTRYAG 1 cut(s) 191
BfoI RGCGCY 2 cut(s) 821, 1409
BfuAI ACCTGC 5 cut(s) 184, 541, 1295, 1302, 1422
BfuI GTATCC 1 cut(s) 60
BglI GCCNNNNNGGC 1 cut(s) 692
BlpI GCTNAGC 1 cut(s) 1431
Bme1390I CCNGG 5 cut(s) 43, 205, 394, 891, 1371
Bme18I GGWCC 1 cut(s) 861
BmgBI CACGTC 1 cut(s) 1013
BmgT120I GGNCC 5 cut(s) 283, 284, 295, 812, 861
BmiI GGNNCC 6 cut(s) 182, 202, 285, 862, 1110, 1272
BmrFI CCNGG 5 cut(s) 43, 205, 394, 891, 1371
BmsI GCATC 4 cut(s) 22, 91, 552, 829
BoxI GACNNNNGTC 1 cut(s) 212
BpmI CTGGAG 4 cut(s) 238, 415, 501, 867
Bpu10I CCTNAGC 1 cut(s) 224
Bpu1102I GCTNAGC 1 cut(s) 1431
Bpu14I TTCGAA 1 cut(s) 929
BpuEI CTTGAG 1 cut(s) 195
BpuMI CCSGG 2 cut(s) 43, 205
BsaHI GRCGYC 1 cut(s) 578
BsaI GGTCTC 1 cut(s) 1251
BsaJI CCNNGG 4 cut(s) 298, 497, 654, 1099
BsaWI WCCGGW 5 cut(s) 63, 618, 741, 863, 1111
Bsc4I CCNNNNNNNGG 7 cut(s) 48, 292, 293, 574, 809, 890, 1105
Bse118I RCCGGY 3 cut(s) 124, 610, 814
Bse1I ACTGG 4 cut(s) 248, 518, 878, 884
BseAI TCCGGA 2 cut(s) 63, 863
BseBI CCWGG 3 cut(s) 394, 891, 1371
BseDI CCNNGG 4 cut(s) 298, 497, 654, 1099
BseGI GGATG 4 cut(s) 384, 721, 829, 835
BseLI CCNNNNNNNGG 7 cut(s) 48, 292, 293, 574, 809, 890, 1105
BseMII CTCAG 5 cut(s) 156, 215, 822, 834, 1422
BseNI ACTGG 4 cut(s) 248, 518, 878, 884
BseRI GAGGAG 2 cut(s) 186, 446
BseSI GKGCMC 1 cut(s) 287
BseYI CCCAGC 2 cut(s) 254, 1402
BsgI GTGCAG 2 cut(s) 257, 1280
Bsh1236I CGCG 1 cut(s) 76
BshFI GGCC 7 cut(s) 177, 285, 297, 695, 780, 814, 1230
BsiHKAI GWGCWC 2 cut(s) 517, 990
BslFI GGGAC 2 cut(s) 548, 1364
BslI CCNNNNNNNGG 7 cut(s) 48, 292, 293, 574, 809, 890, 1105
BsmAI GTCTC 3 cut(s) 113, 301, 1251
BsmFI GGGAC 2 cut(s) 548, 1364
BsmI GAATGC 1 cut(s) 688
BsnI GGCC 7 cut(s) 177, 285, 297, 695, 780, 814, 1230
Bso31I GGTCTC 1 cut(s) 1251
Bsp119I TTCGAA 1 cut(s) 929
Bsp120I GGGCCC 1 cut(s) 283
Bsp1286I GDGCHC 5 cut(s) 205, 287, 517, 909, 990
Bsp13I TCCGGA 2 cut(s) 63, 863
Bsp143I GATC 7 cut(s) 156, 360, 588, 603, 672, 1108, 1184
Bsp1720I GCTNAGC 1 cut(s) 1431
Bsp19I CCATGG 1 cut(s) 497
BspANI GGCC 7 cut(s) 177, 285, 297, 695, 780, 814, 1230
BspCNI CTCAG 5 cut(s) 157, 216, 821, 835, 1423
BspEI TCCGGA 2 cut(s) 63, 863
BspFNI CGCG 1 cut(s) 76
BspLI GGNNCC 6 cut(s) 182, 202, 285, 862, 1110, 1272
BspMAI CTGCAG 1 cut(s) 195
BspMI ACCTGC 5 cut(s) 184, 541, 1295, 1302, 1422
BspPI GGATC 4 cut(s) 596, 598, 1103, 1116
BspT104I TTCGAA 1 cut(s) 929
BspTNI GGTCTC 1 cut(s) 1251
BsrFI RCCGGY 3 cut(s) 124, 610, 814
BsrI ACTGG 4 cut(s) 248, 518, 878, 884
BssAI RCCGGY 3 cut(s) 124, 610, 814
BssECI CCNNGG 4 cut(s) 298, 497, 654, 1099
BssMI GATC 7 cut(s) 156, 360, 588, 603, 672, 1108, 1184
BssNI GRCGYC 1 cut(s) 578
BssT1I CCWWGG 4 cut(s) 298, 497, 654, 1099
Bst2UI CCWGG 3 cut(s) 394, 891, 1371
Bst4CI ACNGT 3 cut(s) 512, 853, 973
BstACI GRCGYC 1 cut(s) 578
BstAPI GCANNNNNTGC 2 cut(s) 235, 442
BstBI TTCGAA 1 cut(s) 929
BstC8I GCNNGC 9 cut(s) 612, 816, 1316, 1320, 1347, 1351, 1355, 1361, 1437
BstDEI CTNAG 5 cut(s) 165, 224, 808, 843, 1431
BstDSI CCRYGG 1 cut(s) 497
BstF5I GGATG 4 cut(s) 384, 721, 829, 835
BstFNI CGCG 1 cut(s) 76
BstH2I RGCGCY 2 cut(s) 821, 1409
BstHHI GCGC 6 cut(s) 190, 496, 820, 1359, 1408, 1430
BstKTI GATC 7 cut(s) 159, 363, 591, 606, 675, 1111, 1187
BstMAI GTCTC 3 cut(s) 113, 301, 1251
BstMBI GATC 7 cut(s) 156, 360, 588, 603, 672, 1108, 1184
BstNI CCWGG 3 cut(s) 394, 891, 1371
BstNSI RCATGY 1 cut(s) 108
BstPAI GACNNNNGTC 1 cut(s) 212
BstSCI CCNGG 5 cut(s) 41, 203, 392, 889, 1369
BstSFI CTRYAG 1 cut(s) 191
BstSLI GKGCMC 1 cut(s) 287
BstUI CGCG 1 cut(s) 76
BstX2I RGATCY 2 cut(s) 603, 1108
BstYI RGATCY 2 cut(s) 603, 1108
BsuI GTATCC 1 cut(s) 60
BsuRI GGCC 7 cut(s) 177, 285, 297, 695, 780, 814, 1230
BtgI CCRYGG 1 cut(s) 497
BtrI CACGTC 1 cut(s) 1013
BtsCI GGATG 4 cut(s) 384, 721, 829, 835
BtsIMutI CAGTG 2 cut(s) 241, 525
BveI ACCTGC 5 cut(s) 184, 541, 1295, 1302, 1422
Cac8I GCNNGC 9 cut(s) 612, 816, 1316, 1320, 1347, 1351, 1355, 1361, 1437
CaiI CAGNNNCTG 2 cut(s) 254, 890
CfoI GCGC 6 cut(s) 190, 496, 820, 1359, 1408, 1430
Cfr10I RCCGGY 3 cut(s) 124, 610, 814
Cfr13I GGNCC 5 cut(s) 283, 284, 295, 812, 861
CseI GACGC 3 cut(s) 170, 567, 1366
Csp6I GTAC 1 cut(s) 805
CviAII CATG 9 cut(s) 105, 373, 498, 547, 574, 1007, 1144, 1220, 1232
CviQI GTAC 1 cut(s) 805
DdeI CTNAG 5 cut(s) 165, 224, 808, 843, 1431
DpnI GATC 7 cut(s) 158, 362, 590, 605, 674, 1110, 1186
DpnII GATC 7 cut(s) 156, 360, 588, 603, 672, 1108, 1184
EciI GGCGGA 3 cut(s) 42, 64, 1263
Eco130I CCWWGG 4 cut(s) 298, 497, 654, 1099
Eco24I GRGCYC 3 cut(s) 205, 287, 909
Eco31I GGTCTC 1 cut(s) 1251
Eco47I GGWCC 1 cut(s) 861
Eco47III AGCGCT 1 cut(s) 1407
EcoRII CCWGG 3 cut(s) 392, 889, 1369
EcoT14I CCWWGG 4 cut(s) 298, 497, 654, 1099
EcoT22I ATGCAT 1 cut(s) 106
EcoT38I GRGCYC 3 cut(s) 205, 287, 909
ErhI CCWWGG 4 cut(s) 298, 497, 654, 1099
FaeI CATG 9 cut(s) 108, 376, 501, 550, 577, 1010, 1147, 1223, 1235
FaqI GGGAC 2 cut(s) 548, 1364
FatI CATG 9 cut(s) 104, 372, 497, 546, 573, 1006, 1143, 1219, 1231
FauI CCCGC 4 cut(s) 471, 615, 1323, 1350
FokI GGATG 4 cut(s) 391, 728, 836, 842
FriOI GRGCYC 3 cut(s) 205, 287, 909
FspBI CTAG 2 cut(s) 1170, 1449
GlaI GCGC 6 cut(s) 189, 495, 819, 1358, 1407, 1429
GsaI CCCAGC 2 cut(s) 258, 1406
GsuI CTGGAG 4 cut(s) 238, 415, 501, 867
HaeII RGCGCY 2 cut(s) 821, 1409
HaeIII GGCC 7 cut(s) 177, 285, 297, 695, 780, 814, 1230
HgaI GACGC 3 cut(s) 170, 567, 1366
HhaI GCGC 6 cut(s) 190, 496, 820, 1359, 1408, 1430
Hin1I GRCGYC 1 cut(s) 578
Hin1II CATG 9 cut(s) 108, 376, 501, 550, 577, 1010, 1147, 1223, 1235
Hin6I GCGC 6 cut(s) 188, 494, 818, 1357, 1406, 1428
HinP1I GCGC 6 cut(s) 188, 494, 818, 1357, 1406, 1428
HindIII AAGCTT 1 cut(s) 701
HinfI GANTC 5 cut(s) 208, 469, 880, 1088, 1127
HphI GGTGA 4 cut(s) 139, 166, 583, 1208
Hpy166II GTNNAC 4 cut(s) 421, 849, 879, 1131
Hpy188I TCNGA 2 cut(s) 625, 1093
Hpy188III TCNNGA 6 cut(s) 64, 110, 217, 668, 864, 1085
Hpy8I GTNNAC 4 cut(s) 421, 849, 879, 1131
Hpy99I CGWCG 2 cut(s) 116, 164
HpyAV CCTTC 2 cut(s) 685, 1220
HpyCH4III ACNGT 3 cut(s) 512, 853, 973
HpyCH4IV ACGT 3 cut(s) 792, 1003, 1012
HpyF3I CTNAG 5 cut(s) 165, 224, 808, 843, 1431
HpySE526I ACGT 3 cut(s) 792, 1003, 1012
Hsp92I GRCGYC 1 cut(s) 578
Hsp92II CATG 9 cut(s) 108, 376, 501, 550, 577, 1010, 1147, 1223, 1235
HspAI GCGC 6 cut(s) 188, 494, 818, 1357, 1406, 1428
Kpn2I TCCGGA 2 cut(s) 63, 863
KroI GCCGGC 2 cut(s) 610, 814
KroNI GCCGGC 2 cut(s) 612, 816
Kzo9I GATC 7 cut(s) 156, 360, 588, 603, 672, 1108, 1184
LmnI GCTCC 6 cut(s) 180, 200, 407, 433, 520, 1276
LweI GCATC 4 cut(s) 22, 91, 552, 829
MaeI CTAG 2 cut(s) 1170, 1449
MaeII ACGT 3 cut(s) 792, 1003, 1012
MaeIII GTNAC 4 cut(s) 784, 956, 1196, 1282
MalI GATC 7 cut(s) 158, 362, 590, 605, 674, 1110, 1186
MboI GATC 7 cut(s) 156, 360, 588, 603, 672, 1108, 1184
MboII GAAGA 6 cut(s) 943, 1028, 1159, 1162, 1165, 1182
MflI RGATCY 2 cut(s) 603, 1108
MhlI GDGCHC 5 cut(s) 205, 287, 517, 909, 990
MluCI AATT 6 cut(s) 708, 725, 897, 978, 1049, 1466
MlyI GAGTC 3 cut(s) 202, 874, 1136
MmeI TCCRAC 1 cut(s) 775
Mph1103I ATGCAT 1 cut(s) 106
MreI CGCCGGCG 1 cut(s) 610
MroI TCCGGA 2 cut(s) 63, 863
MroNI GCCGGC 2 cut(s) 610, 814
MseI TTAA 1 cut(s) 402
MslI CAYNNNNRTG 2 cut(s) 377, 1011
MspR9I CCNGG 5 cut(s) 43, 205, 394, 891, 1371
Mva1269I GAATGC 1 cut(s) 688
MvaI CCWGG 3 cut(s) 394, 891, 1371
MvnI CGCG 1 cut(s) 76
NaeI GCCGGC 2 cut(s) 612, 816
NciI CCSGG 2 cut(s) 43, 205
NcoI CCATGG 1 cut(s) 497
NdeII GATC 7 cut(s) 156, 360, 588, 603, 672, 1108, 1184
NgoMIV GCCGGC 2 cut(s) 610, 814
NlaIII CATG 9 cut(s) 108, 376, 501, 550, 577, 1010, 1147, 1223, 1235
NlaIV GGNNCC 6 cut(s) 182, 202, 285, 862, 1110, 1272
NmeAIII GCCGAG 1 cut(s) 721
NmuCI GTSAC 3 cut(s) 956, 1196, 1282
NsiI ATGCAT 1 cut(s) 106
NspI RCATGY 1 cut(s) 108
NspV TTCGAA 1 cut(s) 929
PaqCI CACCTGC 1 cut(s) 184
PcsI WCGNNNNNNNCGW 3 cut(s) 117, 464, 1009
PctI GAATGC 1 cut(s) 688
PdiI GCCGGC 2 cut(s) 612, 816
PfeI GAWTC 2 cut(s) 469, 1088
PflFI GACNNNGTC 1 cut(s) 116
PflMI CCANNNNNTGG 1 cut(s) 890
PleI GAGTC 3 cut(s) 202, 874, 1135
PpsI GAGTC 3 cut(s) 202, 874, 1135
PshAI GACNNNNGTC 1 cut(s) 212
PshBI ATTAAT 1 cut(s) 402
PsiI TTATAA 1 cut(s) 507
Psp6I CCWGG 3 cut(s) 392, 889, 1369
PspFI CCCAGC 2 cut(s) 254, 1402
PspGI CCWGG 3 cut(s) 392, 889, 1369
PspN4I GGNNCC 6 cut(s) 182, 202, 285, 862, 1110, 1272
PspOMI GGGCCC 1 cut(s) 283
PspPI GGNCC 5 cut(s) 283, 284, 295, 812, 861
PstI CTGCAG 1 cut(s) 195
PstNI CAGNNNCTG 2 cut(s) 254, 890
PsuI RGATCY 2 cut(s) 603, 1108
PsyI GACNNNGTC 1 cut(s) 116
RsaI GTAC 1 cut(s) 806
RsaNI GTAC 1 cut(s) 805
RseI CAYNNNNRTG 2 cut(s) 377, 1011
SaqAI TTAA 1 cut(s) 402
Sau3AI GATC 7 cut(s) 156, 360, 588, 603, 672, 1108, 1184
Sau96I GGNCC 5 cut(s) 283, 284, 295, 812, 861
SchI GAGTC 3 cut(s) 202, 874, 1136
ScrFI CCNGG 5 cut(s) 43, 205, 394, 891, 1371
SduI GDGCHC 5 cut(s) 205, 287, 517, 909, 990
SfaNI GCATC 4 cut(s) 22, 91, 552, 829
SfcI CTRYAG 1 cut(s) 191
SfuI TTCGAA 1 cut(s) 929
SgrAI CRCCGGYG 1 cut(s) 610
SinI GGWCC 1 cut(s) 861
SmiMI CAYNNNNRTG 2 cut(s) 377, 1011
SmlI CTYRAG 1 cut(s) 210
SmoI CTYRAG 1 cut(s) 210
SpeI ACTAGT 1 cut(s) 1169
Sse9I AATT 6 cut(s) 708, 725, 897, 978, 1049, 1466
SspMI CTAG 2 cut(s) 1170, 1449
StyD4I CCNGG 5 cut(s) 41, 203, 392, 889, 1369
StyI CCWWGG 4 cut(s) 298, 497, 654, 1099
TaaI ACNGT 3 cut(s) 512, 853, 973
TaiI ACGT 3 cut(s) 795, 1006, 1015
TaqI TCGA 7 cut(s) 111, 159, 458, 675, 929, 975, 1464
TasI AATT 6 cut(s) 708, 725, 897, 978, 1049, 1466
TauI GCSGC 2 cut(s) 76, 264
TfiI GAWTC 2 cut(s) 469, 1088
Tru1I TTAA 1 cut(s) 402
Tru9I TTAA 1 cut(s) 402
TscAI CASTG 2 cut(s) 248, 525
TseFI GTSAC 3 cut(s) 956, 1196, 1282
Tsp45I GTSAC 3 cut(s) 956, 1196, 1282
TspDTI ATGAA 3 cut(s) 361, 732, 1160
TspRI CASTG 2 cut(s) 248, 525
Tth111I GACNNNGTC 1 cut(s) 116
Van91I CCANNNNNTGG 1 cut(s) 890
VpaK11BI GGWCC 1 cut(s) 861
VspI ATTAAT 1 cut(s) 402
XapI RAATTY 1 cut(s) 725
XceI RCATGY 1 cut(s) 108
XspI CTAG 2 cut(s) 1170, 1449
Zsp2I ATGCAT 1 cut(s) 106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.