Rmu_sc0012847.1_g000003

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012847.1
OG0000187
Physical Location & Seq
Forward (+)
8459 .. 9553
1095 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012847.1_g000003.1.cds

Sequence Viewer

Length: 1041 bp
atgtcttctgttgatgcaatggctgctagactagcctcctctcttgctatcgctgaaggcaagaggcagattgatttgcgacctaagcagggtaagggtttgcgacaggcaaacgtattcttggtgggcaagctcctcaccgctcgggatttcaaggtccagtccttcatggggatgtttcgcaatgcctggagggttaatggttcgctgcaggtggaggaagcagaaggacagagagtgctattcacgctgtcggatccgtctgatcgagttcgaatatggcggggtgccccatggggatataaccacacgccggtggctctagctttgtatgatggtatcatgccggtggagaaagtgcccctagctatggcatcatattggataactcttctgggaataccaccagcgtttcgatctgaacgtgtcatgactatgatcggctacacgctgggggattttcaggagcttgataggactgctaagaagactaggaaactccagattagggttgagatacctttgcataaaccattgcctttcaagcggtggtacttggtagaagatgcggtcgagtttcgctgccaattccgttatgacaagcttttcggaagatgctctgtatgtggattagtcacgcacgtgggtttgccatgctccggaccggcattggatgaagacgatgatgaagccgagagaatttttttgggatcccagaacaaggggcatgctagtggtagtgggctcaatactggtgtaagagctagggttaccaccccatgtccaccattgatatttcggactccagatcctggtccgagtgaggaaccatgtttgaatgttttgtttccaaagcagaagcgacatgttgtggtatgcgaactccaggggacaacggacactcgagaacgcctcactggcaagcgtcgagccagagaagaaagcctgactatctctcctaagaaattgaaattgagcttggcggtaggtaagagaaatctcactcttgattctgaaaatctgggattggaccctatatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

346

Amino Acids

38.69

Weight (kDa)

9.52

Isoelectric Point (pI)

41.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000187)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20170 FvH4_4g06831
rosa_chinensis RchiOBHm_Chr1g0321991 RchiOBHm_Chr2g0161811
rosa_laevigata RLG00000015375 RLG00000018377
rosa_multiflora Rmu_co8011754.1_g000001 Rmu_co8019986.1_g000001 Rmu_co8067766.1_g000001 Rmu_co8156128.1_g000001 Rmu_co8219154.1_g000003 Rmu_co8297235.1_g000001 Rmu_co8345223.1_g000001 Rmu_co8364775.1_g000001 Rmu_co8465075.1_g000001 Rmu_sc0000007.1_g000002 Rmu_sc0000054.1_g000015 Rmu_sc0000054.1_g000023 Rmu_sc0000145.1_g000010 Rmu_sc0000166.1_g000006 Rmu_sc0000218.1_g000012 Rmu_sc0000339.1_g000008 Rmu_sc0000342.1_g000015 Rmu_sc0000464.1_g000008 Rmu_sc0000620.1_g000003 Rmu_sc0000638.1_g000017 Rmu_sc0000890.1_g000007 Rmu_sc0000894.1_g000024 Rmu_sc0000909.1_g000010 Rmu_sc0000928.1_g000020 Rmu_sc0000977.1_g000007 Rmu_sc0001022.1_g000003 Rmu_sc0001035.1_g000037 Rmu_sc0001060.1_g000008 Rmu_sc0001168.1_g000005 Rmu_sc0001173.1_g000022 Rmu_sc0001179.1_g000016 Rmu_sc0001408.1_g000003 Rmu_sc0001455.1_g000005 Rmu_sc0001484.1_g000008 Rmu_sc0001585.1_g000010 Rmu_sc0001702.1_g000030 Rmu_sc0001755.1_g000063 Rmu_sc0001903.1_g000009 Rmu_sc0002099.1_g000001 Rmu_sc0002142.1_g000012 Rmu_sc0002158.1_g000014 Rmu_sc0002307.1_g000009 Rmu_sc0002358.1_g000013 Rmu_sc0002421.1_g000002 Rmu_sc0002426.1_g000003 Rmu_sc0002438.1_g000001 Rmu_sc0002461.1_g000001 Rmu_sc0002508.1_g000003 Rmu_sc0002532.1_g000056 Rmu_sc0002583.1_g000002 Rmu_sc0002927.1_g000033 Rmu_sc0003033.1_g000040 Rmu_sc0003271.1_g000006 Rmu_sc0003381.1_g000006 Rmu_sc0003507.1_g000007 Rmu_sc0003578.1_g000003 Rmu_sc0003693.1_g000004 Rmu_sc0003693.1_g000005 Rmu_sc0003704.1_g000003 Rmu_sc0003840.1_g000002 Rmu_sc0004084.1_g000026 Rmu_sc0004193.1_g000007 Rmu_sc0004234.1_g000033 Rmu_sc0004235.1_g000025 Rmu_sc0004435.1_g000006 Rmu_sc0004727.1_g000003 Rmu_sc0004741.1_g000001 Rmu_sc0004926.1_g000004 Rmu_sc0005365.1_g000001 Rmu_sc0005392.1_g000007 Rmu_sc0005415.1_g000001 Rmu_sc0005539.1_g000007 Rmu_sc0005708.1_g000017 Rmu_sc0006317.1_g000007 Rmu_sc0006453.1_g000054 Rmu_sc0006536.1_g000004 Rmu_sc0006740.1_g000022 Rmu_sc0006763.1_g000012 Rmu_sc0007115.1_g000002 Rmu_sc0007115.1_g000010 Rmu_sc0007129.1_g000017 Rmu_sc0007131.1_g000010 Rmu_sc0008373.1_g000008 Rmu_sc0009005.1_g000008 Rmu_sc0009252.1_g000007 Rmu_sc0009599.1_g000022 Rmu_sc0009785.1_g000027 Rmu_sc0009891.1_g000003 Rmu_sc0010099.1_g000010 Rmu_sc0010266.1_g000008 Rmu_sc0010334.1_g000003 Rmu_sc0010381.1_g000001 Rmu_sc0010496.1_g000003 Rmu_sc0010496.1_g000004 Rmu_sc0010546.1_g000003 Rmu_sc0011482.1_g000006 Rmu_sc0011875.1_g000010 Rmu_sc0011917.1_g000006 Rmu_sc0012293.1_g000004 Rmu_sc0012847.1_g000003 Rmu_sc0013773.1_g000001 Rmu_sc0016060.1_g000003 Rmu_sc0016170.1_g000013 Rmu_sc0016393.1_g000002 Rmu_sc0017589.1_g000001 Rmu_sc0017786.1_g000005 Rmu_sc0018326.1_g000002 Rmu_sc0020760.1_g000001 Rmu_sc0021262.1_g000003 Rmu_sc0023851.1_g000002 Rmu_sc0024044.1_g000001 Rmu_sc0026820.1_g000001 Rmu_sc0032306.1_g000001 Rmu_sc0035666.1_g000001 Rmu_sc0036881.1_g000001 Rmu_sc0037030.1_g000001 Rmu_sc0037158.1_g000001 Rmu_ssc0000016.1_g000002 Rmu_ssc0000044.1_g000012 Rmu_ssc0000044.1_g000014 Rmu_ssc0000050.1_g000064 Rmu_ssc0000064.1_g000022 Rmu_ssc0000154.1_g000037 Rmu_ssc0000178.1_g000013 Rmu_ssc0000217.1_g000022 Rmu_ssc0000392.1_g000004
rosa_roxburghii Rroxscaffold_3G00242000 Rroxscaffold_3G00242530 Rroxscaffold_6G00406010
rosa_rugosa Rorug01G0062000 Rorug02G0224000 Rorug02G0262900 Rorug02G0263000 Rorug02G0358900 Rorug02G0360500 Rorug02G0378500.1 Rorug02G0378600 Rorug02G0394700 Rorug03G0122900 Rorug03G0254600 Rorug03G0254700 Rorug03G0254800 Rorug04G0042200.1 Rorug04G0378100 Rorug05G0053400 Rorug05G0238600 Rorug05G0364500 Rorug05G0562000 Rorug06G0089300 Rorug06G0089400 Rorug06G0145700 Rorug07G0111600 Rorug07G0229500.1 Rorug07G0287600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 202
Acc36I ACCTGC 1 cut(s) 202
AccB1I GGYRCC 1 cut(s) 287
AccB7I CCANNNNNTGG 1 cut(s) 812
AccBSI CCGCTC 1 cut(s) 143
AccIII TCCGGA 1 cut(s) 659
AciI CCGC 5 cut(s) 141, 283, 547, 569, 983
AclWI GGATC 5 cut(s) 251, 264, 705, 718, 803
AcsI RAATTY 1 cut(s) 699
AcuI CTGAAG 1 cut(s) 75
AcvI CACGTG 1 cut(s) 643
AfaI GTAC 1 cut(s) 554
AfiI CCNNNNNNNGG 8 cut(s) 89, 171, 313, 370, 508, 659, 721, 812
AflIII ACRYGT 2 cut(s) 424, 865
AgsI TTSAA 4 cut(s) 154, 544, 838, 970
AjnI CCWGG 3 cut(s) 188, 811, 885
AjuI GAANNNNNNNTTGG 2 cut(s) 962, 994
AleI CACNNNNGTG 2 cut(s) 314, 641
AluBI AGCT 7 cut(s) 133, 326, 368, 469, 604, 764, 978
AluI AGCT 7 cut(s) 133, 326, 368, 469, 604, 764, 978
AlwI GGATC 5 cut(s) 251, 264, 705, 718, 803
AlwNI CAGNNNCTG 1 cut(s) 812
Ama87I CYCGRG 2 cut(s) 144, 903
Aor13HI TCCGGA 1 cut(s) 659
ApeKI GCWGC 3 cut(s) 23, 208, 582
ApoI RAATTY 1 cut(s) 699
ArsI GACNNNNNNTTYG 2 cut(s) 590, 622
AspS9I GGNCC 4 cut(s) 157, 662, 815, 1030
AsuHPI GGTGA 1 cut(s) 130
AsuII TTCGAA 1 cut(s) 274
AvaI CYCGRG 2 cut(s) 144, 903
AvaII GGWCC 4 cut(s) 157, 662, 815, 1030
BaeGI GKGCMC 2 cut(s) 292, 363
BamHI GGATCC 2 cut(s) 256, 710
BanI GGYRCC 1 cut(s) 287
BanII GRGCYC 1 cut(s) 747
BbrPI CACGTG 1 cut(s) 643
BbsI GAAGAC 2 cut(s) 494, 684
BbvI GCAGC 3 cut(s) 10, 195, 569
BccI CCATC 1 cut(s) 329
BciT130I CCWGG 3 cut(s) 190, 813, 887
BfaI CTAG 7 cut(s) 27, 32, 323, 365, 492, 732, 765
BfmI CTRYAG 1 cut(s) 209
BfuAI ACCTGC 1 cut(s) 202
BglI GCCNNNNNGGC 1 cut(s) 918
BisI GCNGC 3 cut(s) 24, 209, 583
BlsI GCNGC 3 cut(s) 25, 210, 584
Bme1390I CCNGG 3 cut(s) 190, 813, 887
Bme18I GGWCC 4 cut(s) 157, 662, 815, 1030
BmeT110I CYCGRG 2 cut(s) 144, 903
BmgT120I GGNCC 4 cut(s) 157, 662, 815, 1030
BmiI GGNNCC 5 cut(s) 258, 289, 712, 828, 1032
BmrFI CCNGG 3 cut(s) 190, 813, 887
BmsI GCATC 4 cut(s) 4, 383, 556, 605
BpiI GAAGAC 2 cut(s) 494, 684
BplI GAGNNNNNCTC 2 cut(s) 897, 929
BpmI CTGGAG 4 cut(s) 211, 485, 789, 869
Bpu10I CCTNAGC 1 cut(s) 84
Bpu14I TTCGAA 1 cut(s) 274
BsaAI YACGTR 1 cut(s) 643
BsaJI CCNNGG 2 cut(s) 293, 886
BsaWI WCCGGW 1 cut(s) 659
BsaXI ACNNNNNCTCC 2 cut(s) 940, 970
Bsc4I CCNNNNNNNGG 8 cut(s) 89, 171, 313, 370, 508, 659, 721, 812
Bse118I RCCGGY 3 cut(s) 313, 346, 664
Bse1I ACTGG 3 cut(s) 160, 757, 922
Bse3DI GCAATG 3 cut(s) 24, 190, 533
BseAI TCCGGA 1 cut(s) 659
BseBI CCWGG 3 cut(s) 190, 813, 887
BseDI CCNNGG 2 cut(s) 293, 886
BseGI GGATG 2 cut(s) 180, 679
BseLI CCNNNNNNNGG 8 cut(s) 89, 171, 313, 370, 508, 659, 721, 812
BseMI GCAATG 3 cut(s) 24, 190, 533
BseNI ACTGG 3 cut(s) 160, 757, 922
BseRI GAGGAG 2 cut(s) 28, 125
BseSI GKGCMC 2 cut(s) 292, 363
BseXI GCAGC 3 cut(s) 10, 195, 569
BseYI CCCAGC 1 cut(s) 451
Bsh1285I CGRYCG 1 cut(s) 573
BshNI GGYRCC 1 cut(s) 287
BsiEI CGRYCG 1 cut(s) 573
BsiHKCI CYCGRG 2 cut(s) 144, 903
BsiSI CCGG 4 cut(s) 314, 347, 660, 665
BslFI GGGAC 1 cut(s) 904
BslI CCNNNNNNNGG 8 cut(s) 89, 171, 313, 370, 508, 659, 721, 812
BsmFI GGGAC 1 cut(s) 904
BsoBI CYCGRG 2 cut(s) 144, 903
Bsp119I TTCGAA 1 cut(s) 274
Bsp1286I GDGCHC 3 cut(s) 292, 363, 747
Bsp13I TCCGGA 1 cut(s) 659
Bsp143I GATC 6 cut(s) 256, 265, 416, 438, 710, 808
Bsp19I CCATGG 1 cut(s) 293
BspACI CCGC 5 cut(s) 141, 283, 547, 569, 983
BspEI TCCGGA 1 cut(s) 659
BspHI TCATGA 1 cut(s) 429
BspLI GGNNCC 5 cut(s) 258, 289, 712, 828, 1032
BspMAI CTGCAG 1 cut(s) 213
BspMI ACCTGC 1 cut(s) 202
BspPI GGATC 5 cut(s) 251, 264, 705, 718, 803
BspT104I TTCGAA 1 cut(s) 274
BspT107I GGYRCC 1 cut(s) 287
BsrBI CCGCTC 1 cut(s) 143
BsrDI GCAATG 3 cut(s) 24, 190, 533
BsrFI RCCGGY 3 cut(s) 313, 346, 664
BsrI ACTGG 3 cut(s) 160, 757, 922
BssAI RCCGGY 3 cut(s) 313, 346, 664
BssECI CCNNGG 2 cut(s) 293, 886
BssMI GATC 6 cut(s) 256, 265, 416, 438, 710, 808
BssT1I CCWWGG 1 cut(s) 293
Bst2UI CCWGG 3 cut(s) 190, 813, 887
Bst6I CTCTTC 1 cut(s) 396
BstAPI GCANNNNNTGC 1 cut(s) 23
BstBAI YACGTR 1 cut(s) 643
BstBI TTCGAA 1 cut(s) 274
BstC8I GCNNGC 3 cut(s) 131, 729, 923
BstDEI CTNAG 3 cut(s) 84, 483, 960
BstDSI CCRYGG 1 cut(s) 293
BstEII GGTNACC 1 cut(s) 769
BstF5I GGATG 2 cut(s) 180, 679
BstKTI GATC 6 cut(s) 259, 268, 419, 441, 713, 811
BstMBI GATC 6 cut(s) 256, 265, 416, 438, 710, 808
BstMCI CGRYCG 1 cut(s) 573
BstMWI GCNNNNNNNGC 6 cut(s) 23, 32, 85, 247, 544, 918
BstNI CCWGG 3 cut(s) 190, 813, 887
BstNSI RCATGY 2 cut(s) 731, 869
BstPI GGTNACC 1 cut(s) 769
BstSCI CCNGG 3 cut(s) 188, 811, 885
BstSFI CTRYAG 1 cut(s) 209
BstSLI GKGCMC 2 cut(s) 292, 363
BstV1I GCAGC 3 cut(s) 10, 195, 569
BstV2I GAAGAC 2 cut(s) 494, 684
BstX2I RGATCY 3 cut(s) 256, 710, 808
BstYI RGATCY 3 cut(s) 256, 710, 808
BtgI CCRYGG 1 cut(s) 293
BtsCI GGATG 2 cut(s) 180, 679
BtsIMutI CAGTG 1 cut(s) 915
BveI ACCTGC 1 cut(s) 202
Cac8I GCNNGC 3 cut(s) 131, 729, 923
CaiI CAGNNNCTG 1 cut(s) 812
CciI TCATGA 1 cut(s) 429
Cfr10I RCCGGY 3 cut(s) 313, 346, 664
Cfr13I GGNCC 4 cut(s) 157, 662, 815, 1030
CpoI CGGWCCG 1 cut(s) 662
CseI GACGC 1 cut(s) 914
Csp6I GTAC 1 cut(s) 553
CspI CGGWCCG 1 cut(s) 662
CviAII CATG 9 cut(s) 169, 294, 343, 430, 654, 728, 780, 831, 866
CviQI GTAC 1 cut(s) 553
DdeI CTNAG 3 cut(s) 84, 483, 960
DpnI GATC 6 cut(s) 258, 267, 418, 440, 712, 810
DpnII GATC 6 cut(s) 256, 265, 416, 438, 710, 808
Eam1104I CTCTTC 1 cut(s) 396
EarI CTCTTC 1 cut(s) 396
Eco130I CCWWGG 1 cut(s) 293
Eco24I GRGCYC 1 cut(s) 747
Eco47I GGWCC 4 cut(s) 157, 662, 815, 1030
Eco57I CTGAAG 1 cut(s) 75
Eco72I CACGTG 1 cut(s) 643
Eco88I CYCGRG 2 cut(s) 144, 903
Eco91I GGTNACC 1 cut(s) 769
EcoO65I GGTNACC 1 cut(s) 769
EcoRII CCWGG 3 cut(s) 188, 811, 885
EcoT14I CCWWGG 1 cut(s) 293
EcoT38I GRGCYC 1 cut(s) 747
ErhI CCWWGG 1 cut(s) 293
FaeI CATG 9 cut(s) 172, 297, 346, 433, 657, 731, 783, 834, 869
FaqI GGGAC 1 cut(s) 904
FatI CATG 9 cut(s) 168, 293, 342, 429, 653, 727, 779, 830, 865
FauI CCCGC 1 cut(s) 276
Fnu4HI GCNGC 3 cut(s) 24, 209, 583
FokI GGATG 2 cut(s) 187, 686
FriOI GRGCYC 1 cut(s) 747
Fsp4HI GCNGC 3 cut(s) 24, 209, 583
FspBI CTAG 7 cut(s) 27, 32, 323, 365, 492, 732, 765
GluI GCNGC 3 cut(s) 24, 209, 583
GsaI CCCAGC 1 cut(s) 455
GsuI CTGGAG 4 cut(s) 211, 485, 789, 869
HapII CCGG 4 cut(s) 314, 347, 660, 665
HgaI GACGC 1 cut(s) 914
Hin1II CATG 9 cut(s) 172, 297, 346, 433, 657, 731, 783, 834, 869
HindIII AAGCTT 1 cut(s) 602
HinfI GANTC 2 cut(s) 802, 1010
HpaII CCGG 4 cut(s) 314, 347, 660, 665
HphI GGTGA 1 cut(s) 130
Hpy166II GTNNAC 1 cut(s) 785
Hpy188I TCNGA 7 cut(s) 256, 265, 421, 611, 801, 819, 1015
Hpy188III TCNNGA 8 cut(s) 146, 430, 464, 502, 660, 806, 905, 1007
Hpy8I GTNNAC 1 cut(s) 785
Hpy99I CGWCG 1 cut(s) 930
HpyAV CCTTC 3 cut(s) 50, 175, 221
HpyCH4IV ACGT 3 cut(s) 114, 424, 642
HpyCH4V TGCA 3 cut(s) 17, 211, 526
HpyF10VI GCNNNNNNNGC 6 cut(s) 23, 32, 85, 247, 544, 918
HpyF3I CTNAG 3 cut(s) 84, 483, 960
HpySE526I ACGT 3 cut(s) 114, 424, 642
Hsp92II CATG 9 cut(s) 172, 297, 346, 433, 657, 731, 783, 834, 869
Kpn2I TCCGGA 1 cut(s) 659
Kzo9I GATC 6 cut(s) 256, 265, 416, 438, 710, 808
LmnI GCTCC 3 cut(s) 138, 466, 662
Lsp1109I GCAGC 3 cut(s) 10, 195, 569
LweI GCATC 4 cut(s) 4, 383, 556, 605
MaeI CTAG 7 cut(s) 27, 32, 323, 365, 492, 732, 765
MaeII ACGT 3 cut(s) 114, 424, 642
MaeIII GTNAC 2 cut(s) 634, 769
MalI GATC 6 cut(s) 258, 267, 418, 440, 712, 810
MbiI CCGCTC 1 cut(s) 143
MboI GATC 6 cut(s) 256, 265, 416, 438, 710, 808
MboII GAAGA 6 cut(s) 383, 499, 575, 624, 689, 950
MflI RGATCY 3 cut(s) 256, 710, 808
MhlI GDGCHC 3 cut(s) 292, 363, 747
MluCI AATT 4 cut(s) 587, 699, 965, 971
MlyI GAGTC 1 cut(s) 796
MmeI TCCRAC 1 cut(s) 234
MnlI CCTC 8 cut(s) 46, 49, 57, 146, 186, 211, 817, 923
MroI TCCGGA 1 cut(s) 659
MseI TTAA 1 cut(s) 198
MslI CAYNNNNRTG 6 cut(s) 173, 314, 347, 434, 641, 732
MspI CCGG 4 cut(s) 314, 347, 660, 665
MspR9I CCNGG 3 cut(s) 190, 813, 887
MvaI CCWGG 3 cut(s) 190, 813, 887
MwoI GCNNNNNNNGC 6 cut(s) 23, 32, 85, 247, 544, 918
NcoI CCATGG 1 cut(s) 293
NdeII GATC 6 cut(s) 256, 265, 416, 438, 710, 808
NlaIII CATG 9 cut(s) 172, 297, 346, 433, 657, 731, 783, 834, 869
NlaIV GGNNCC 5 cut(s) 258, 289, 712, 828, 1032
NmeAIII GCCGAG 1 cut(s) 718
NmuCI GTSAC 1 cut(s) 634
NspI RCATGY 2 cut(s) 731, 869
NspV TTCGAA 1 cut(s) 274
OliI CACNNNNGTG 2 cut(s) 314, 641
PaeI GCATGC 1 cut(s) 731
PaeR7I CTCGAG 1 cut(s) 903
PagI TCATGA 1 cut(s) 429
PaqCI CACCTGC 1 cut(s) 202
PciI ACATGT 1 cut(s) 865
PcsI WCGNNNNNNNCGW 1 cut(s) 421
PfeI GAWTC 1 cut(s) 1010
PflMI CCANNNNNTGG 1 cut(s) 812
PkrI GCNGC 3 cut(s) 25, 210, 584
PleI GAGTC 1 cut(s) 796
PmaCI CACGTG 1 cut(s) 643
PmlI CACGTG 1 cut(s) 643
PpsI GAGTC 1 cut(s) 796
Ppu21I YACGTR 1 cut(s) 643
PscI ACATGT 1 cut(s) 865
Psp6I CCWGG 3 cut(s) 188, 811, 885
PspCI CACGTG 1 cut(s) 643
PspEI GGTNACC 1 cut(s) 769
PspFI CCCAGC 1 cut(s) 451
PspGI CCWGG 3 cut(s) 188, 811, 885
PspN4I GGNNCC 5 cut(s) 258, 289, 712, 828, 1032
PspPI GGNCC 4 cut(s) 157, 662, 815, 1030
PstI CTGCAG 1 cut(s) 213
PstNI CAGNNNCTG 1 cut(s) 812
PsuI RGATCY 3 cut(s) 256, 710, 808
RsaI GTAC 1 cut(s) 554
RsaNI GTAC 1 cut(s) 553
RseI CAYNNNNRTG 6 cut(s) 173, 314, 347, 434, 641, 732
Rsr2I CGGWCCG 1 cut(s) 662
RsrII CGGWCCG 1 cut(s) 662
SaqAI TTAA 1 cut(s) 198
SatI GCNGC 3 cut(s) 24, 209, 583
Sau3AI GATC 6 cut(s) 256, 265, 416, 438, 710, 808
Sau96I GGNCC 4 cut(s) 157, 662, 815, 1030
SchI GAGTC 1 cut(s) 796
ScrFI CCNGG 3 cut(s) 190, 813, 887
SduI GDGCHC 3 cut(s) 292, 363, 747
SfaNI GCATC 4 cut(s) 4, 383, 556, 605
SfcI CTRYAG 1 cut(s) 209
Sfr274I CTCGAG 1 cut(s) 903
SfuI TTCGAA 1 cut(s) 274
SgrAI CRCCGGYG 1 cut(s) 313
SinI GGWCC 4 cut(s) 157, 662, 815, 1030
SlaI CTCGAG 1 cut(s) 903
SmiMI CAYNNNNRTG 6 cut(s) 173, 314, 347, 434, 641, 732
SmlI CTYRAG 1 cut(s) 903
SmoI CTYRAG 1 cut(s) 903
SphI GCATGC 1 cut(s) 731
Sse9I AATT 4 cut(s) 587, 699, 965, 971
SsiI CCGC 5 cut(s) 141, 283, 547, 569, 983
SspMI CTAG 7 cut(s) 27, 32, 323, 365, 492, 732, 765
StyD4I CCNGG 3 cut(s) 188, 811, 885
StyI CCWWGG 1 cut(s) 293
TaiI ACGT 3 cut(s) 117, 427, 645
TaqI TCGA 6 cut(s) 268, 274, 415, 573, 904, 928
TasI AATT 4 cut(s) 587, 699, 965, 971
TfiI GAWTC 1 cut(s) 1010
Tru1I TTAA 1 cut(s) 198
Tru9I TTAA 1 cut(s) 198
TscAI CASTG 1 cut(s) 922
TseFI GTSAC 1 cut(s) 634
TseI GCWGC 3 cut(s) 23, 208, 582
Tsp45I GTSAC 1 cut(s) 634
TspDTI ATGAA 3 cut(s) 157, 690, 702
TspGWI ACGGA 3 cut(s) 249, 581, 911
TspRI CASTG 1 cut(s) 922
Van91I CCANNNNNTGG 1 cut(s) 812
VpaK11BI GGWCC 4 cut(s) 157, 662, 815, 1030
XapI RAATTY 1 cut(s) 699
XceI RCATGY 2 cut(s) 731, 869
XhoI CTCGAG 1 cut(s) 903
XspI CTAG 7 cut(s) 27, 32, 323, 365, 492, 732, 765
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.