Rmu_sc0006763.1_g000012

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006763.1
OG0000187
Physical Location & Seq
Forward (+)
74519 .. 81519
7001 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006763.1_g000012.1.cds

Sequence Viewer

Length: 1533 bp
atgtcatctggaagggactgccaaccaggtgactcaccggaagggactgccaaccgagatgtagtatggaagggactgccaatcagactattatctagaagggactaccaactaggatttaataggctaaaaaatcgaagtcacaaaactgccctacatgcctccacggcctacgcgccggcagccaccacctccgatggccaccaaattttggcagcagcaacatcacaacagacccaacaagtttatcaactacaacacattccaattttacctttaagtgctcgaaattggccggtggccagagactgtcggaatagccggaacttgacgaaacttccaaattgctacagtgagcttcacggctcaaatccgagctcctccggccgagtcattgaaaaacaccaccgcaggtgtgacaaggaggaggaggcgagcttgccggtgccgagattccgtcgtggggtggccagaggaggaagaaatcggtggaggaaaaatcgggccgaagaggaggaaaggatcgggggagaggagagagaaaactcgaagtcattaacaattcgatctgaagaagaagaggaagatgccgtacaattccacgaggacttggttggagctgtcacagcgtctagacccaccgcctattatgatggcgttgctcccattgaatctgtctcttttgcgacgtcgtcgtactggatcacactgcagggcatccctcctgccttccgatctgagaggctgatgactatgattggattcactcttggtgatttcaaggagattgataaacaggccaagaagataggtaatttgggcatcaaggtggaaatacctttcaacagaccattgtccttcaaatgctggtattgggtggaggatgaggttgagtttctctataagtttaggtatgataaactttttggtagatgctcggtttgtggtttagttacccatgtaagattaccatattctgggcctccattggaggaagatgatgaagccgagcgcacagtgttgggtgcagcaccggcggctactccaactgcactagagatgcagcttattggggtcaataatttggcctctagttcggcatcaactactagggtaaatgcaagcactcgagctagggtttctatggcaggtaaggagtttgttttctgtgctatgattcccaatcaaatgccggaactaacagggaagaggagaagtagggaagcggatgttatcactatatctcccaagaaattgaaattgagcctagctgttggcaaaagaaacctgaatttggaaccgaaaaatttaggactggtacctgtgctgcaatctgaggagcagcctattcagatgaagagaaagaggggtagaccttcaggtagtaggaacaaactacagtatggtgaaaagaagaaaccaaaacagggtgatgagactaggacaaccaagaaaaaactattaccaaagcttgacaaggcagatgtcgttttaggctccaactcaagagggaaggagttggctctttactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

510

Amino Acids

57.15

Weight (kDa)

9.62

Isoelectric Point (pI)

57.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000187)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20170 FvH4_4g06831
rosa_chinensis RchiOBHm_Chr1g0321991 RchiOBHm_Chr2g0161811
rosa_laevigata RLG00000015375 RLG00000018377
rosa_multiflora Rmu_co8011754.1_g000001 Rmu_co8019986.1_g000001 Rmu_co8067766.1_g000001 Rmu_co8156128.1_g000001 Rmu_co8219154.1_g000003 Rmu_co8297235.1_g000001 Rmu_co8345223.1_g000001 Rmu_co8364775.1_g000001 Rmu_co8465075.1_g000001 Rmu_sc0000007.1_g000002 Rmu_sc0000054.1_g000015 Rmu_sc0000054.1_g000023 Rmu_sc0000145.1_g000010 Rmu_sc0000166.1_g000006 Rmu_sc0000218.1_g000012 Rmu_sc0000339.1_g000008 Rmu_sc0000342.1_g000015 Rmu_sc0000464.1_g000008 Rmu_sc0000620.1_g000003 Rmu_sc0000638.1_g000017 Rmu_sc0000890.1_g000007 Rmu_sc0000894.1_g000024 Rmu_sc0000909.1_g000010 Rmu_sc0000928.1_g000020 Rmu_sc0000977.1_g000007 Rmu_sc0001022.1_g000003 Rmu_sc0001035.1_g000037 Rmu_sc0001060.1_g000008 Rmu_sc0001168.1_g000005 Rmu_sc0001173.1_g000022 Rmu_sc0001179.1_g000016 Rmu_sc0001408.1_g000003 Rmu_sc0001455.1_g000005 Rmu_sc0001484.1_g000008 Rmu_sc0001585.1_g000010 Rmu_sc0001702.1_g000030 Rmu_sc0001755.1_g000063 Rmu_sc0001903.1_g000009 Rmu_sc0002099.1_g000001 Rmu_sc0002142.1_g000012 Rmu_sc0002158.1_g000014 Rmu_sc0002307.1_g000009 Rmu_sc0002358.1_g000013 Rmu_sc0002421.1_g000002 Rmu_sc0002426.1_g000003 Rmu_sc0002438.1_g000001 Rmu_sc0002461.1_g000001 Rmu_sc0002508.1_g000003 Rmu_sc0002532.1_g000056 Rmu_sc0002583.1_g000002 Rmu_sc0002927.1_g000033 Rmu_sc0003033.1_g000040 Rmu_sc0003271.1_g000006 Rmu_sc0003381.1_g000006 Rmu_sc0003507.1_g000007 Rmu_sc0003578.1_g000003 Rmu_sc0003693.1_g000004 Rmu_sc0003693.1_g000005 Rmu_sc0003704.1_g000003 Rmu_sc0003840.1_g000002 Rmu_sc0004084.1_g000026 Rmu_sc0004193.1_g000007 Rmu_sc0004234.1_g000033 Rmu_sc0004235.1_g000025 Rmu_sc0004435.1_g000006 Rmu_sc0004727.1_g000003 Rmu_sc0004741.1_g000001 Rmu_sc0004926.1_g000004 Rmu_sc0005365.1_g000001 Rmu_sc0005392.1_g000007 Rmu_sc0005415.1_g000001 Rmu_sc0005539.1_g000007 Rmu_sc0005708.1_g000017 Rmu_sc0006317.1_g000007 Rmu_sc0006453.1_g000054 Rmu_sc0006536.1_g000004 Rmu_sc0006740.1_g000022 Rmu_sc0006763.1_g000012 Rmu_sc0007115.1_g000002 Rmu_sc0007115.1_g000010 Rmu_sc0007129.1_g000017 Rmu_sc0007131.1_g000010 Rmu_sc0008373.1_g000008 Rmu_sc0009005.1_g000008 Rmu_sc0009252.1_g000007 Rmu_sc0009599.1_g000022 Rmu_sc0009785.1_g000027 Rmu_sc0009891.1_g000003 Rmu_sc0010099.1_g000010 Rmu_sc0010266.1_g000008 Rmu_sc0010334.1_g000003 Rmu_sc0010381.1_g000001 Rmu_sc0010496.1_g000003 Rmu_sc0010496.1_g000004 Rmu_sc0010546.1_g000003 Rmu_sc0011482.1_g000006 Rmu_sc0011875.1_g000010 Rmu_sc0011917.1_g000006 Rmu_sc0012293.1_g000004 Rmu_sc0012847.1_g000003 Rmu_sc0013773.1_g000001 Rmu_sc0016060.1_g000003 Rmu_sc0016170.1_g000013 Rmu_sc0016393.1_g000002 Rmu_sc0017589.1_g000001 Rmu_sc0017786.1_g000005 Rmu_sc0018326.1_g000002 Rmu_sc0020760.1_g000001 Rmu_sc0021262.1_g000003 Rmu_sc0023851.1_g000002 Rmu_sc0024044.1_g000001 Rmu_sc0026820.1_g000001 Rmu_sc0032306.1_g000001 Rmu_sc0035666.1_g000001 Rmu_sc0036881.1_g000001 Rmu_sc0037030.1_g000001 Rmu_sc0037158.1_g000001 Rmu_ssc0000016.1_g000002 Rmu_ssc0000044.1_g000012 Rmu_ssc0000044.1_g000014 Rmu_ssc0000050.1_g000064 Rmu_ssc0000064.1_g000022 Rmu_ssc0000154.1_g000037 Rmu_ssc0000178.1_g000013 Rmu_ssc0000217.1_g000022 Rmu_ssc0000392.1_g000004
rosa_roxburghii Rroxscaffold_3G00242000 Rroxscaffold_3G00242530 Rroxscaffold_6G00406010
rosa_rugosa Rorug01G0062000 Rorug02G0224000 Rorug02G0262900 Rorug02G0263000 Rorug02G0358900 Rorug02G0360500 Rorug02G0378500.1 Rorug02G0378600 Rorug02G0394700 Rorug03G0122900 Rorug03G0254600 Rorug03G0254700 Rorug03G0254800 Rorug04G0042200.1 Rorug04G0378100 Rorug05G0053400 Rorug05G0238600 Rorug05G0364500 Rorug05G0562000 Rorug06G0089300 Rorug06G0089400 Rorug06G0145700 Rorug07G0111600 Rorug07G0229500.1 Rorug07G0287600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 402
AatII GACGTC 1 cut(s) 692
Acc36I ACCTGC 2 cut(s) 402, 1139
Acc65I GGTACC 1 cut(s) 1318
AccB1I GGYRCC 2 cut(s) 445, 1318
AccB7I CCANNNNNTGG 2 cut(s) 211, 977
AccI GTMKAC 1 cut(s) 1372
AccII CGCG 1 cut(s) 176
AciI CCGC 4 cut(s) 409, 642, 1037, 1226
AclWI GGATC 2 cut(s) 530, 710
AcoI YGGCCR 5 cut(s) 199, 293, 300, 385, 468
AcsI RAATTY 3 cut(s) 207, 1291, 1306
AcuI CTGAAG 2 cut(s) 591, 1362
AcyI GRCGYC 1 cut(s) 689
AfaI GTAC 3 cut(s) 594, 698, 1320
AfiI CCNNNNNNNGG 5 cut(s) 211, 463, 977, 1294, 1427
AgsI TTSAA 6 cut(s) 398, 671, 781, 844, 862, 1258
AjnI CCWGG 1 cut(s) 25
AluBI AGCT 8 cut(s) 358, 378, 438, 620, 1066, 1133, 1271, 1471
AluI AGCT 8 cut(s) 358, 378, 438, 620, 1066, 1133, 1271, 1471
Alw21I GWGCWC 2 cut(s) 286, 380
Alw26I GTCTC 3 cut(s) 300, 682, 1430
AlwI GGATC 2 cut(s) 530, 710
AlwNI CAGNNNCTG 1 cut(s) 309
Ama87I CYCGRG 1 cut(s) 1128
ApeKI GCWGC 7 cut(s) 182, 215, 218, 1028, 1063, 1327, 1342
ApoI RAATTY 3 cut(s) 207, 1291, 1306
Asp718I GGTACC 1 cut(s) 1318
AspLEI GCGC 2 cut(s) 178, 1014
AspS9I GGNCC 2 cut(s) 504, 980
AsuHPI GGTGA 5 cut(s) 27, 41, 785, 1418, 1442
AvaI CYCGRG 1 cut(s) 1128
BalI TGGCCA 3 cut(s) 201, 302, 470
BanI GGYRCC 2 cut(s) 445, 1318
BanII GRGCYC 1 cut(s) 380
BarI GAAGNNNNNNTAC 2 cut(s) 576, 608
BauI CACGAG 1 cut(s) 602
Bbv12I GWGCWC 2 cut(s) 286, 380
BbvI GCAGC 7 cut(s) 194, 227, 230, 1040, 1075, 1314, 1354
BccI CCATC 2 cut(s) 191, 647
BceAI ACGGC 3 cut(s) 183, 379, 575
BciT130I CCWGG 1 cut(s) 27
BcoDI GTCTC 3 cut(s) 300, 682, 1430
BfmI CTRYAG 3 cut(s) 349, 710, 1397
BfuAI ACCTGC 2 cut(s) 402, 1139
BglI GCCNNNNNGGC 1 cut(s) 167
BisI GCNGC 8 cut(s) 183, 216, 219, 1029, 1038, 1064, 1328, 1343
BlsI GCNGC 8 cut(s) 184, 217, 220, 1030, 1039, 1065, 1329, 1344
Bme1390I CCNGG 1 cut(s) 27
BmeT110I CYCGRG 1 cut(s) 1128
BmgT120I GGNCC 2 cut(s) 504, 980
BmiI GGNNCC 4 cut(s) 447, 1299, 1320, 1498
BmrFI CCNGG 1 cut(s) 27
BmsI GCATC 6 cut(s) 577, 726, 831, 923, 1050, 1109
BoxI GACNNNNGTC 1 cut(s) 853
BpuEI CTTGAG 1 cut(s) 1489
BsaHI GRCGYC 1 cut(s) 689
BsaJI CCNNGG 1 cut(s) 165
BsaWI WCCGGW 1 cut(s) 37
BsaXI ACNNNNNCTCC 2 cut(s) 1228, 1258
Bsc4I CCNNNNNNNGG 5 cut(s) 211, 463, 977, 1294, 1427
Bse118I RCCGGY 4 cut(s) 178, 295, 442, 1033
Bse1I ACTGG 2 cut(s) 704, 1320
BseBI CCWGG 1 cut(s) 27
BseDI CCNNGG 1 cut(s) 165
BseGI GGATG 3 cut(s) 717, 889, 1234
BseLI CCNNNNNNNGG 5 cut(s) 211, 463, 977, 1294, 1427
BseMII CTCAG 2 cut(s) 729, 1326
BseNI ACTGG 2 cut(s) 704, 1320
BseRI GAGGAG 8 cut(s) 370, 440, 443, 489, 527, 548, 1225, 1352
BseX3I CGGCCG 1 cut(s) 385
BseXI GCAGC 7 cut(s) 194, 227, 230, 1040, 1075, 1314, 1354
BsgI GTGCAG 2 cut(s) 1035, 1047
Bsh1236I CGCG 1 cut(s) 176
Bsh1285I CGRYCG 1 cut(s) 388
BshNI GGYRCC 2 cut(s) 445, 1318
BsiEI CGRYCG 1 cut(s) 388
BsiHKAI GWGCWC 2 cut(s) 286, 380
BsiHKCI CYCGRG 1 cut(s) 1128
BsiSI CCGG 8 cut(s) 38, 179, 296, 322, 384, 443, 1034, 1193
BslFI GGGAC 4 cut(s) 29, 58, 87, 116
BslI CCNNNNNNNGG 5 cut(s) 211, 463, 977, 1294, 1427
BsmAI GTCTC 3 cut(s) 300, 682, 1430
BsmFI GGGAC 4 cut(s) 29, 58, 87, 116
BsoBI CYCGRG 1 cut(s) 1128
Bsp1286I GDGCHC 2 cut(s) 286, 380
Bsp143I GATC 4 cut(s) 522, 566, 702, 734
BspACI CCGC 4 cut(s) 409, 642, 1037, 1226
BspCNI CTCAG 2 cut(s) 730, 1327
BspFNI CGCG 1 cut(s) 176
BspLI GGNNCC 4 cut(s) 447, 1299, 1320, 1498
BspMAI CTGCAG 1 cut(s) 714
BspMI ACCTGC 2 cut(s) 402, 1139
BspPI GGATC 2 cut(s) 530, 710
BspT107I GGYRCC 2 cut(s) 445, 1318
BsrFI RCCGGY 4 cut(s) 178, 295, 442, 1033
BsrI ACTGG 2 cut(s) 704, 1320
BssAI RCCGGY 4 cut(s) 178, 295, 442, 1033
BssECI CCNNGG 1 cut(s) 165
BssMI GATC 4 cut(s) 522, 566, 702, 734
BssNI GRCGYC 1 cut(s) 689
BssSI CACGAG 1 cut(s) 602
Bst2BI CACGAG 1 cut(s) 602
Bst2UI CCWGG 1 cut(s) 27
Bst4CI ACNGT 4 cut(s) 311, 353, 1018, 1401
Bst6I CTCTTC 4 cut(s) 504, 573, 1202, 1352
BstACI GRCGYC 1 cut(s) 689
BstC8I GCNNGC 4 cut(s) 180, 436, 440, 1123
BstDEI CTNAG 2 cut(s) 738, 1335
BstDSI CCRYGG 1 cut(s) 165
BstF5I GGATG 3 cut(s) 717, 889, 1234
BstFNI CGCG 1 cut(s) 176
BstHHI GCGC 2 cut(s) 178, 1014
BstKTI GATC 4 cut(s) 525, 569, 705, 737
BstMAI GTCTC 3 cut(s) 300, 682, 1430
BstMBI GATC 4 cut(s) 522, 566, 702, 734
BstMCI CGRYCG 1 cut(s) 388
BstMWI GCNNNNNNNGC 7 cut(s) 158, 167, 182, 384, 626, 1034, 1037
BstNI CCWGG 1 cut(s) 27
BstNSI RCATGY 1 cut(s) 161
BstPAI GACNNNNGTC 1 cut(s) 853
BstSCI CCNGG 1 cut(s) 25
BstSFI CTRYAG 3 cut(s) 349, 710, 1397
BstUI CGCG 1 cut(s) 176
BstV1I GCAGC 7 cut(s) 194, 227, 230, 1040, 1075, 1314, 1354
BstZI CGGCCG 1 cut(s) 385
BtgI CCRYGG 1 cut(s) 165
BtsCI GGATG 3 cut(s) 717, 889, 1234
BtsI GCAGTG 1 cut(s) 707
BtsIMutI CAGTG 3 cut(s) 358, 707, 1023
BveI ACCTGC 2 cut(s) 402, 1139
Cac8I GCNNGC 4 cut(s) 180, 436, 440, 1123
CaiI CAGNNNCTG 1 cut(s) 309
CfoI GCGC 2 cut(s) 178, 1014
Cfr10I RCCGGY 4 cut(s) 178, 295, 442, 1033
Cfr13I GGNCC 2 cut(s) 504, 980
CseI GACGC 1 cut(s) 618
CsiI ACCWGGT 1 cut(s) 25
Csp6I GTAC 3 cut(s) 593, 697, 1319
CviAII CATG 2 cut(s) 158, 959
CviQI GTAC 3 cut(s) 593, 697, 1319
DdeI CTNAG 2 cut(s) 738, 1335
DpnI GATC 4 cut(s) 524, 568, 704, 736
DpnII GATC 4 cut(s) 522, 566, 702, 734
EaeI YGGCCR 5 cut(s) 199, 293, 300, 385, 468
EagI CGGCCG 1 cut(s) 385
Eam1104I CTCTTC 4 cut(s) 504, 573, 1202, 1352
EarI CTCTTC 4 cut(s) 504, 573, 1202, 1352
Ecl136II GAGCTC 1 cut(s) 378
EclXI CGGCCG 1 cut(s) 385
Eco24I GRGCYC 1 cut(s) 380
Eco52I CGGCCG 1 cut(s) 385
Eco53kI GAGCTC 1 cut(s) 378
Eco57I CTGAAG 2 cut(s) 591, 1362
Eco88I CYCGRG 1 cut(s) 1128
EcoICRI GAGCTC 1 cut(s) 378
EcoRII CCWGG 1 cut(s) 25
EcoT38I GRGCYC 1 cut(s) 380
FaeI CATG 2 cut(s) 161, 962
FaqI GGGAC 4 cut(s) 29, 58, 87, 116
FatI CATG 2 cut(s) 157, 958
FblI GTMKAC 1 cut(s) 1372
Fnu4HI GCNGC 8 cut(s) 183, 216, 219, 1029, 1038, 1064, 1328, 1343
FokI GGATG 3 cut(s) 704, 896, 1241
FriOI GRGCYC 1 cut(s) 380
Fsp4HI GCNGC 8 cut(s) 183, 216, 219, 1029, 1038, 1064, 1328, 1343
GlaI GCGC 2 cut(s) 177, 1013
GluI GCNGC 8 cut(s) 183, 216, 219, 1029, 1038, 1064, 1328, 1343
HapII CCGG 8 cut(s) 38, 179, 296, 322, 384, 443, 1034, 1193
HgaI GACGC 1 cut(s) 618
HhaI GCGC 2 cut(s) 178, 1014
Hin1I GRCGYC 1 cut(s) 689
Hin1II CATG 2 cut(s) 161, 962
Hin6I GCGC 2 cut(s) 176, 1012
HinP1I GCGC 2 cut(s) 176, 1012
HindIII AAGCTT 1 cut(s) 1469
HinfI GANTC 6 cut(s) 32, 390, 453, 671, 762, 1177
HpaII CCGG 8 cut(s) 38, 179, 296, 322, 384, 443, 1034, 1193
HphI GGTGA 5 cut(s) 27, 41, 785, 1418, 1442
Hpy166II GTNNAC 1 cut(s) 1373
Hpy188I TCNGA 9 cut(s) 86, 196, 315, 375, 571, 734, 739, 1336, 1353
Hpy188III TCNNGA 4 cut(s) 9, 96, 633, 1506
Hpy8I GTNNAC 1 cut(s) 1373
Hpy99I CGWCG 4 cut(s) 462, 691, 694, 697
HpyAV CCTTC 8 cut(s) 6, 35, 64, 93, 739, 868, 1386, 1507
HpyCH4III ACNGT 4 cut(s) 311, 353, 1018, 1401
HpyCH4IV ACGT 1 cut(s) 689
HpyCH4V TGCA 6 cut(s) 712, 1028, 1052, 1063, 1121, 1330
HpyF10VI GCNNNNNNNGC 7 cut(s) 158, 167, 182, 384, 626, 1034, 1037
HpyF3I CTNAG 2 cut(s) 738, 1335
HpySE526I ACGT 1 cut(s) 689
Hsp92I GRCGYC 1 cut(s) 689
Hsp92II CATG 2 cut(s) 161, 962
HspAI GCGC 2 cut(s) 176, 1012
KpnI GGTACC 1 cut(s) 1322
KroI GCCGGC 1 cut(s) 178
KroNI GCCGGC 1 cut(s) 180
Kzo9I GATC 4 cut(s) 522, 566, 702, 734
LmnI GCTCC 5 cut(s) 383, 617, 667, 1339, 1502
Lsp1109I GCAGC 7 cut(s) 194, 227, 230, 1040, 1075, 1314, 1354
LweI GCATC 6 cut(s) 577, 726, 831, 923, 1050, 1109
MabI ACCWGGT 1 cut(s) 25
MaeII ACGT 1 cut(s) 689
MaeIII GTNAC 5 cut(s) 29, 140, 416, 622, 952
MalI GATC 4 cut(s) 524, 568, 704, 736
MboI GATC 4 cut(s) 522, 566, 702, 734
MhlI GDGCHC 2 cut(s) 286, 380
MlsI TGGCCA 3 cut(s) 201, 302, 470
MluNI TGGCCA 3 cut(s) 201, 302, 470
MlyI GAGTC 2 cut(s) 26, 399
MmeI TCCRAC 4 cut(s) 293, 595, 1070, 1524
Mox20I TGGCCA 3 cut(s) 201, 302, 470
MroNI GCCGGC 1 cut(s) 178
MscI TGGCCA 3 cut(s) 201, 302, 470
MseI TTAA 3 cut(s) 120, 278, 557
MslI CAYNNNNRTG 1 cut(s) 827
Msp20I TGGCCA 3 cut(s) 201, 302, 470
MspI CCGG 8 cut(s) 38, 179, 296, 322, 384, 443, 1034, 1193
MspR9I CCNGG 1 cut(s) 27
MvaI CCWGG 1 cut(s) 27
MvnI CGCG 1 cut(s) 176
MwoI GCNNNNNNNGC 7 cut(s) 158, 167, 182, 384, 626, 1034, 1037
NaeI GCCGGC 1 cut(s) 180
NdeII GATC 4 cut(s) 522, 566, 702, 734
NgoMIV GCCGGC 1 cut(s) 178
NlaIII CATG 2 cut(s) 161, 962
NlaIV GGNNCC 4 cut(s) 447, 1299, 1320, 1498
NmeAIII GCCGAG 3 cut(s) 413, 474, 1033
NmuCI GTSAC 4 cut(s) 29, 140, 416, 622
NspI RCATGY 1 cut(s) 161
PaeR7I CTCGAG 1 cut(s) 1128
PaqCI CACCTGC 1 cut(s) 402
PdiI GCCGGC 1 cut(s) 180
PfeI GAWTC 4 cut(s) 453, 671, 762, 1177
PflFI GACNNNGTC 1 cut(s) 691
PflMI CCANNNNNTGG 2 cut(s) 211, 977
PkrI GCNGC 8 cut(s) 184, 217, 220, 1030, 1039, 1065, 1329, 1344
PleI GAGTC 2 cut(s) 26, 398
PpsI GAGTC 2 cut(s) 26, 398
PshAI GACNNNNGTC 1 cut(s) 853
Psp124BI GAGCTC 1 cut(s) 380
Psp6I CCWGG 1 cut(s) 25
PspGI CCWGG 1 cut(s) 25
PspN4I GGNNCC 4 cut(s) 447, 1299, 1320, 1498
PspPI GGNCC 2 cut(s) 504, 980
PspXI VCTCGAGB 1 cut(s) 1128
PstI CTGCAG 1 cut(s) 714
PstNI CAGNNNCTG 1 cut(s) 309
PsyI GACNNNGTC 1 cut(s) 691
RsaI GTAC 3 cut(s) 594, 698, 1320
RsaNI GTAC 3 cut(s) 593, 697, 1319
RseI CAYNNNNRTG 1 cut(s) 827
SacI GAGCTC 1 cut(s) 380
SaqAI TTAA 3 cut(s) 120, 278, 557
SatI GCNGC 8 cut(s) 183, 216, 219, 1029, 1038, 1064, 1328, 1343
Sau3AI GATC 4 cut(s) 522, 566, 702, 734
Sau96I GGNCC 2 cut(s) 504, 980
SchI GAGTC 2 cut(s) 26, 399
ScrFI CCNGG 1 cut(s) 27
SduI GDGCHC 2 cut(s) 286, 380
SexAI ACCWGGT 1 cut(s) 25
SfaNI GCATC 6 cut(s) 577, 726, 831, 923, 1050, 1109
SfcI CTRYAG 3 cut(s) 349, 710, 1397
Sfr274I CTCGAG 1 cut(s) 1128
SgrAI CRCCGGYG 1 cut(s) 1033
SlaI CTCGAG 1 cut(s) 1128
SmiMI CAYNNNNRTG 1 cut(s) 827
SmlI CTYRAG 2 cut(s) 1128, 1504
SmoI CTYRAG 2 cut(s) 1128, 1504
SsiI CCGC 4 cut(s) 409, 642, 1037, 1226
SstI GAGCTC 1 cut(s) 380
StyD4I CCNGG 1 cut(s) 25
TaaI ACNGT 4 cut(s) 311, 353, 1018, 1401
TaiI ACGT 1 cut(s) 692
TaqI TCGA 5 cut(s) 136, 286, 548, 565, 1129
TauI GCSGC 1 cut(s) 1040
TfiI GAWTC 4 cut(s) 453, 671, 762, 1177
Tru1I TTAA 3 cut(s) 120, 278, 557
Tru9I TTAA 3 cut(s) 120, 278, 557
TscAI CASTG 3 cut(s) 358, 714, 1023
TseFI GTSAC 4 cut(s) 29, 140, 416, 622
TseI GCWGC 7 cut(s) 182, 215, 218, 1028, 1063, 1327, 1342
Tsp45I GTSAC 4 cut(s) 29, 140, 416, 622
TspDTI ATGAA 2 cut(s) 1017, 1370
TspGWI ACGGA 1 cut(s) 446
TspRI CASTG 3 cut(s) 358, 714, 1023
Tth111I GACNNNGTC 1 cut(s) 691
Van91I CCANNNNNTGG 2 cut(s) 211, 977
XapI RAATTY 3 cut(s) 207, 1291, 1306
XbaI TCTAGA 2 cut(s) 95, 632
XceI RCATGY 1 cut(s) 161
XhoI CTCGAG 1 cut(s) 1128
XmiI GTMKAC 1 cut(s) 1372
ZraI GACGTC 1 cut(s) 690
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.