Rmu_sc0002927.1_g000033

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002927.1
OG0000187
Physical Location & Seq
Reverse (-)
130018 .. 131307
1290 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002927.1_g000033.1.cds

Sequence Viewer

Length: 1290 bp
atgacttctgttgatgcaatggctgctagattagcctcctctcttgctcttgctgaaggcaagagagagatcgacttgcgaccaacgcagggcaaaggtttgtttcaggcaaacatattcttggtgggcaagcttctcaccactcgagactttaaggtcaagtcattcatggggatgtttcgcaatgcctggagggtaaatgggtcattgcagaaggaggaagcagaagggcagagggtccttgtcacgttgtcagatcagtcggatcgtgttcggatctggcgtggtgctccgtgggggtataaccatgcgtcggtagccttagcatggtacaatgacattataccggtggagaaggtgccattgaccttggcatcgtactgggtaactcttcagggcatcccaccggctttccggtctgaacgtgttatgaccatgatcggttatacgctgagggattttcaggaaattgataagaatgctaagaagattggaaagctgcggattcgggtggagatcccgttgaacaaaccattgcccttcaagcggtggtatttggtggaggacgaggttgaattccgatgtcagttcaagtatgacaaactttttgggagatgctctgtgtgtggtcttgttacgcatgtgggtttgctgtgctcggggccggcgctagatgaagatgacgatgaagctgaacacaccattctggggtcacaggatacgtggtcggaggcgactgtacgcggcttgcccatgggaactctggccgggtcagcctctggtactgccagtagaagcgggctccatactagagcgagagctagggtttctaccccatgcccacccttggtttttcgaatgccagatcctggtttgagtgggaagctttgcctaaatgcaatgtttcataagcaaaagcgccaggttgtggtgcatgagcttcatgacacaacaggaactccggagggtataactggcaagcgacggggaagagatgacagcctgacactttctcccaagaaactgaaactgagtttggctgtgggaaagcgaaacctcattctggattctgaaaatcttggattaaatccggtacatgaggacatccattctgacagggtgacaaggaaacgaggccaacctattggcagtaggaataagtcgttttctggtgacaagcagaaagcctcaaaacatggggagggtgaggagaagaaaaagtctccaaagatgaagcagtctggggggaaacactccaacttgaaagggaaggagttagttattgtctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

429

Amino Acids

47.72

Weight (kDa)

9.77

Isoelectric Point (pI)

35.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000187)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20170 FvH4_4g06831
rosa_chinensis RchiOBHm_Chr1g0321991 RchiOBHm_Chr2g0161811
rosa_laevigata RLG00000015375 RLG00000018377
rosa_multiflora Rmu_co8011754.1_g000001 Rmu_co8019986.1_g000001 Rmu_co8067766.1_g000001 Rmu_co8156128.1_g000001 Rmu_co8219154.1_g000003 Rmu_co8297235.1_g000001 Rmu_co8345223.1_g000001 Rmu_co8364775.1_g000001 Rmu_co8465075.1_g000001 Rmu_sc0000007.1_g000002 Rmu_sc0000054.1_g000015 Rmu_sc0000054.1_g000023 Rmu_sc0000145.1_g000010 Rmu_sc0000166.1_g000006 Rmu_sc0000218.1_g000012 Rmu_sc0000339.1_g000008 Rmu_sc0000342.1_g000015 Rmu_sc0000464.1_g000008 Rmu_sc0000620.1_g000003 Rmu_sc0000638.1_g000017 Rmu_sc0000890.1_g000007 Rmu_sc0000894.1_g000024 Rmu_sc0000909.1_g000010 Rmu_sc0000928.1_g000020 Rmu_sc0000977.1_g000007 Rmu_sc0001022.1_g000003 Rmu_sc0001035.1_g000037 Rmu_sc0001060.1_g000008 Rmu_sc0001168.1_g000005 Rmu_sc0001173.1_g000022 Rmu_sc0001179.1_g000016 Rmu_sc0001408.1_g000003 Rmu_sc0001455.1_g000005 Rmu_sc0001484.1_g000008 Rmu_sc0001585.1_g000010 Rmu_sc0001702.1_g000030 Rmu_sc0001755.1_g000063 Rmu_sc0001903.1_g000009 Rmu_sc0002099.1_g000001 Rmu_sc0002142.1_g000012 Rmu_sc0002158.1_g000014 Rmu_sc0002307.1_g000009 Rmu_sc0002358.1_g000013 Rmu_sc0002421.1_g000002 Rmu_sc0002426.1_g000003 Rmu_sc0002438.1_g000001 Rmu_sc0002461.1_g000001 Rmu_sc0002508.1_g000003 Rmu_sc0002532.1_g000056 Rmu_sc0002583.1_g000002 Rmu_sc0002927.1_g000033 Rmu_sc0003033.1_g000040 Rmu_sc0003271.1_g000006 Rmu_sc0003381.1_g000006 Rmu_sc0003507.1_g000007 Rmu_sc0003578.1_g000003 Rmu_sc0003693.1_g000004 Rmu_sc0003693.1_g000005 Rmu_sc0003704.1_g000003 Rmu_sc0003840.1_g000002 Rmu_sc0004084.1_g000026 Rmu_sc0004193.1_g000007 Rmu_sc0004234.1_g000033 Rmu_sc0004235.1_g000025 Rmu_sc0004435.1_g000006 Rmu_sc0004727.1_g000003 Rmu_sc0004741.1_g000001 Rmu_sc0004926.1_g000004 Rmu_sc0005365.1_g000001 Rmu_sc0005392.1_g000007 Rmu_sc0005415.1_g000001 Rmu_sc0005539.1_g000007 Rmu_sc0005708.1_g000017 Rmu_sc0006317.1_g000007 Rmu_sc0006453.1_g000054 Rmu_sc0006536.1_g000004 Rmu_sc0006740.1_g000022 Rmu_sc0006763.1_g000012 Rmu_sc0007115.1_g000002 Rmu_sc0007115.1_g000010 Rmu_sc0007129.1_g000017 Rmu_sc0007131.1_g000010 Rmu_sc0008373.1_g000008 Rmu_sc0009005.1_g000008 Rmu_sc0009252.1_g000007 Rmu_sc0009599.1_g000022 Rmu_sc0009785.1_g000027 Rmu_sc0009891.1_g000003 Rmu_sc0010099.1_g000010 Rmu_sc0010266.1_g000008 Rmu_sc0010334.1_g000003 Rmu_sc0010381.1_g000001 Rmu_sc0010496.1_g000003 Rmu_sc0010496.1_g000004 Rmu_sc0010546.1_g000003 Rmu_sc0011482.1_g000006 Rmu_sc0011875.1_g000010 Rmu_sc0011917.1_g000006 Rmu_sc0012293.1_g000004 Rmu_sc0012847.1_g000003 Rmu_sc0013773.1_g000001 Rmu_sc0016060.1_g000003 Rmu_sc0016170.1_g000013 Rmu_sc0016393.1_g000002 Rmu_sc0017589.1_g000001 Rmu_sc0017786.1_g000005 Rmu_sc0018326.1_g000002 Rmu_sc0020760.1_g000001 Rmu_sc0021262.1_g000003 Rmu_sc0023851.1_g000002 Rmu_sc0024044.1_g000001 Rmu_sc0026820.1_g000001 Rmu_sc0032306.1_g000001 Rmu_sc0035666.1_g000001 Rmu_sc0036881.1_g000001 Rmu_sc0037030.1_g000001 Rmu_sc0037158.1_g000001 Rmu_ssc0000016.1_g000002 Rmu_ssc0000044.1_g000012 Rmu_ssc0000044.1_g000014 Rmu_ssc0000050.1_g000064 Rmu_ssc0000064.1_g000022 Rmu_ssc0000154.1_g000037 Rmu_ssc0000178.1_g000013 Rmu_ssc0000217.1_g000022 Rmu_ssc0000392.1_g000004
rosa_roxburghii Rroxscaffold_3G00242000 Rroxscaffold_3G00242530 Rroxscaffold_6G00406010
rosa_rugosa Rorug01G0062000 Rorug02G0224000 Rorug02G0262900 Rorug02G0263000 Rorug02G0358900 Rorug02G0360500 Rorug02G0378500.1 Rorug02G0378600 Rorug02G0394700 Rorug03G0122900 Rorug03G0254600 Rorug03G0254700 Rorug03G0254800 Rorug04G0042200.1 Rorug04G0378100 Rorug05G0053400 Rorug05G0238600 Rorug05G0364500 Rorug05G0562000 Rorug06G0089300 Rorug06G0089400 Rorug06G0145700 Rorug07G0111600 Rorug07G0229500.1 Rorug07G0287600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 155
AccB1I GGYRCC 1 cut(s) 358
AccB7I CCANNNNNTGG 2 cut(s) 869, 928
AccII CGCG 1 cut(s) 744
AccIII TCCGGA 1 cut(s) 961
AciI CCGC 4 cut(s) 502, 547, 744, 798
AclWI GGATC 4 cut(s) 273, 284, 511, 860
AcoI YGGCCR 1 cut(s) 765
AcsI RAATTY 1 cut(s) 575
AcuI CTGAAG 2 cut(s) 75, 377
AfaI GTAC 5 cut(s) 332, 380, 741, 784, 1095
AfiI CCNNNNNNNGG 9 cut(s) 89, 313, 327, 546, 708, 847, 869, 928, 1063
AflIII ACRYGT 1 cut(s) 424
AgeI ACCGGT 1 cut(s) 346
AgsI TTSAA 5 cut(s) 526, 544, 575, 592, 1264
AjnI CCWGG 3 cut(s) 188, 868, 921
AjuI GAANNNNNNNTTGG 2 cut(s) 1019, 1051
AluBI AGCT 6 cut(s) 133, 499, 692, 821, 886, 940
AluI AGCT 6 cut(s) 133, 499, 692, 821, 886, 940
Alw21I GWGCWC 2 cut(s) 292, 659
Alw26I GTCTC 2 cut(s) 141, 1227
AlwI GGATC 4 cut(s) 273, 284, 511, 860
AlwNI CAGNNNCTG 2 cut(s) 779, 869
Ama87I CYCGRG 2 cut(s) 144, 658
Aor13HI TCCGGA 1 cut(s) 961
AoxI GGCC 3 cut(s) 662, 765, 1135
ApeKI GCWGC 2 cut(s) 23, 499
ApoI RAATTY 1 cut(s) 575
ArsI GACNNNNNNTTYG 2 cut(s) 590, 622
AsiGI ACCGGT 1 cut(s) 346
AspLEI GCGC 2 cut(s) 670, 921
AspS9I GGNCC 2 cut(s) 238, 662
AsuC2I CCSGG 1 cut(s) 769
AsuHPI GGTGA 4 cut(s) 130, 1132, 1184, 1217
AsuII TTCGAA 1 cut(s) 856
AvaI CYCGRG 2 cut(s) 144, 658
AvaII GGWCC 1 cut(s) 238
BanI GGYRCC 1 cut(s) 358
BanII GRGCYC 1 cut(s) 804
Bbv12I GWGCWC 2 cut(s) 292, 659
BbvCI CCTCAGC 1 cut(s) 452
BbvI GCAGC 2 cut(s) 10, 486
BciT130I CCWGG 3 cut(s) 190, 870, 923
BciVI GTATCC 1 cut(s) 712
BcnI CCSGG 1 cut(s) 769
BcoDI GTCTC 2 cut(s) 141, 1227
BfaI CTAG 4 cut(s) 27, 671, 810, 822
BfoI RGCGCY 2 cut(s) 671, 922
BfuI GTATCC 1 cut(s) 712
BisI GCNGC 3 cut(s) 24, 500, 745
BlsI GCNGC 3 cut(s) 25, 501, 746
Bme1390I CCNGG 4 cut(s) 190, 769, 870, 923
Bme18I GGWCC 1 cut(s) 238
BmeT110I CYCGRG 2 cut(s) 144, 658
BmgT120I GGNCC 2 cut(s) 238, 662
BmiI GGNNCC 4 cut(s) 239, 360, 663, 803
BmrFI CCNGG 4 cut(s) 190, 769, 870, 923
BmrI ACTGGG 1 cut(s) 391
BmsI GCATC 4 cut(s) 4, 383, 408, 605
BmuI ACTGGG 1 cut(s) 391
BpmI CTGGAG 1 cut(s) 211
Bpu10I CCTNAGC 2 cut(s) 322, 452
Bpu14I TTCGAA 1 cut(s) 856
BpuMI CCSGG 1 cut(s) 769
BsaAI YACGTR 1 cut(s) 723
BsaJI CCNNGG 4 cut(s) 293, 369, 753, 846
BsaWI WCCGGW 4 cut(s) 346, 414, 961, 1090
BsaXI ACNNNNNCTCC 6 cut(s) 506, 536, 943, 973, 997, 1027
Bsc4I CCNNNNNNNGG 9 cut(s) 89, 313, 327, 546, 708, 847, 869, 928, 1063
Bse118I RCCGGY 3 cut(s) 346, 406, 664
Bse1I ACTGG 3 cut(s) 386, 789, 979
Bse3DI GCAATG 5 cut(s) 24, 190, 206, 533, 906
BseAI TCCGGA 1 cut(s) 961
BseBI CCWGG 3 cut(s) 190, 870, 923
BseDI CCNNGG 4 cut(s) 293, 369, 753, 846
BseGI GGATG 3 cut(s) 180, 399, 1104
BseLI CCNNNNNNNGG 9 cut(s) 89, 313, 327, 546, 708, 847, 869, 928, 1063
BseMI GCAATG 5 cut(s) 24, 190, 206, 533, 906
BseMII CTCAG 2 cut(s) 443, 1022
BseNI ACTGG 3 cut(s) 386, 789, 979
BseRI GAGGAG 2 cut(s) 28, 1223
BseXI GCAGC 2 cut(s) 10, 486
Bsh1236I CGCG 1 cut(s) 744
BshFI GGCC 3 cut(s) 664, 767, 1137
BshNI GGYRCC 1 cut(s) 358
BshTI ACCGGT 1 cut(s) 346
BsiHKAI GWGCWC 2 cut(s) 292, 659
BsiHKCI CYCGRG 2 cut(s) 144, 658
BsiSI CCGG 7 cut(s) 347, 407, 415, 665, 768, 962, 1091
BslI CCNNNNNNNGG 9 cut(s) 89, 313, 327, 546, 708, 847, 869, 928, 1063
BsmAI GTCTC 2 cut(s) 141, 1227
BsmI GAATGC 2 cut(s) 484, 864
BsnI GGCC 3 cut(s) 664, 767, 1137
BsoBI CYCGRG 2 cut(s) 144, 658
Bsp119I TTCGAA 1 cut(s) 856
Bsp1286I GDGCHC 3 cut(s) 292, 659, 804
Bsp13I TCCGGA 1 cut(s) 961
Bsp143I GATC 7 cut(s) 69, 256, 265, 276, 438, 516, 865
Bsp19I CCATGG 1 cut(s) 753
BspACI CCGC 4 cut(s) 502, 547, 744, 798
BspANI GGCC 3 cut(s) 664, 767, 1137
BspCNI CTCAG 2 cut(s) 444, 1023
BspEI TCCGGA 1 cut(s) 961
BspFNI CGCG 1 cut(s) 744
BspHI TCATGA 1 cut(s) 943
BspLI GGNNCC 4 cut(s) 239, 360, 663, 803
BspPI GGATC 4 cut(s) 273, 284, 511, 860
BspT104I TTCGAA 1 cut(s) 856
BspT107I GGYRCC 1 cut(s) 358
BsrDI GCAATG 5 cut(s) 24, 190, 206, 533, 906
BsrFI RCCGGY 3 cut(s) 346, 406, 664
BsrI ACTGG 3 cut(s) 386, 789, 979
BssAI RCCGGY 3 cut(s) 346, 406, 664
BssECI CCNNGG 4 cut(s) 293, 369, 753, 846
BssMI GATC 7 cut(s) 69, 256, 265, 276, 438, 516, 865
BssT1I CCWWGG 3 cut(s) 369, 753, 846
Bst2UI CCWGG 3 cut(s) 190, 870, 923
Bst4CI ACNGT 1 cut(s) 739
Bst6I CTCTTC 2 cut(s) 396, 985
BstAPI GCANNNNNTGC 1 cut(s) 23
BstBAI YACGTR 1 cut(s) 723
BstBI TTCGAA 1 cut(s) 856
BstC8I GCNNGC 5 cut(s) 131, 666, 749, 800, 980
BstDEI CTNAG 4 cut(s) 322, 452, 483, 1031
BstDSI CCRYGG 2 cut(s) 293, 753
BstF5I GGATG 3 cut(s) 180, 399, 1104
BstFNI CGCG 1 cut(s) 744
BstH2I RGCGCY 2 cut(s) 671, 922
BstHHI GCGC 2 cut(s) 670, 921
BstKTI GATC 7 cut(s) 72, 259, 268, 279, 441, 519, 868
BstMAI GTCTC 2 cut(s) 141, 1227
BstMBI GATC 7 cut(s) 69, 256, 265, 276, 438, 516, 865
BstMWI GCNNNNNNNGC 6 cut(s) 23, 32, 85, 317, 544, 773
BstNI CCWGG 3 cut(s) 190, 870, 923
BstNSI RCATGY 1 cut(s) 644
BstSCI CCNGG 4 cut(s) 188, 767, 868, 921
BstUI CGCG 1 cut(s) 744
BstV1I GCAGC 2 cut(s) 10, 486
BstX2I RGATCY 3 cut(s) 276, 516, 865
BstXI CCANNNNNNTGG 1 cut(s) 1145
BstYI RGATCY 3 cut(s) 276, 516, 865
BsuI GTATCC 1 cut(s) 712
BsuRI GGCC 3 cut(s) 664, 767, 1137
BtgI CCRYGG 2 cut(s) 293, 753
BtsCI GGATG 3 cut(s) 180, 399, 1104
Cac8I GCNNGC 5 cut(s) 131, 666, 749, 800, 980
CaiI CAGNNNCTG 2 cut(s) 779, 869
CciI TCATGA 1 cut(s) 943
CfoI GCGC 2 cut(s) 670, 921
Cfr10I RCCGGY 3 cut(s) 346, 406, 664
Cfr13I GGNCC 2 cut(s) 238, 662
CseI GACGC 1 cut(s) 300
Csp6I GTAC 5 cut(s) 331, 379, 740, 783, 1094
CspAI ACCGGT 1 cut(s) 346
CviQI GTAC 5 cut(s) 331, 379, 740, 783, 1094
DdeI CTNAG 4 cut(s) 322, 452, 483, 1031
DpnI GATC 7 cut(s) 71, 258, 267, 278, 440, 518, 867
DpnII GATC 7 cut(s) 69, 256, 265, 276, 438, 516, 865
DrdI GACNNNNNNGTC 1 cut(s) 155
DseDI GACNNNNNNGTC 1 cut(s) 155
EaeI YGGCCR 1 cut(s) 765
Eam1104I CTCTTC 2 cut(s) 396, 985
EarI CTCTTC 2 cut(s) 396, 985
Eco130I CCWWGG 3 cut(s) 369, 753, 846
Eco24I GRGCYC 1 cut(s) 804
Eco47I GGWCC 1 cut(s) 238
Eco57I CTGAAG 2 cut(s) 75, 377
Eco88I CYCGRG 2 cut(s) 144, 658
EcoO109I RGGNCCY 1 cut(s) 238
EcoRI GAATTC 1 cut(s) 575
EcoRII CCWGG 3 cut(s) 188, 868, 921
EcoT14I CCWWGG 3 cut(s) 369, 753, 846
EcoT38I GRGCYC 1 cut(s) 804
ErhI CCWWGG 3 cut(s) 369, 753, 846
FauI CCCGC 1 cut(s) 791
Fnu4HI GCNGC 3 cut(s) 24, 500, 745
FokI GGATG 3 cut(s) 187, 386, 1091
FriOI GRGCYC 1 cut(s) 804
Fsp4HI GCNGC 3 cut(s) 24, 500, 745
FspBI CTAG 4 cut(s) 27, 671, 810, 822
GlaI GCGC 2 cut(s) 669, 920
GluI GCNGC 3 cut(s) 24, 500, 745
GsuI CTGGAG 1 cut(s) 211
HaeII RGCGCY 2 cut(s) 671, 922
HaeIII GGCC 3 cut(s) 664, 767, 1137
HapII CCGG 7 cut(s) 347, 407, 415, 665, 768, 962, 1091
HgaI GACGC 1 cut(s) 300
HhaI GCGC 2 cut(s) 670, 921
Hin6I GCGC 2 cut(s) 668, 919
HinP1I GCGC 2 cut(s) 668, 919
HindIII AAGCTT 2 cut(s) 131, 884
HinfI GANTC 2 cut(s) 505, 1067
HpaII CCGG 7 cut(s) 347, 407, 415, 665, 768, 962, 1091
HphI GGTGA 4 cut(s) 130, 1132, 1184, 1217
Hpy188I TCNGA 8 cut(s) 256, 265, 276, 421, 581, 730, 1072, 1114
Hpy188III TCNNGA 5 cut(s) 146, 464, 944, 962, 1064
Hpy99I CGWCG 2 cut(s) 316, 987
HpyAV CCTTC 6 cut(s) 50, 208, 221, 349, 550, 1264
HpyCH4III ACNGT 1 cut(s) 739
HpyCH4IV ACGT 3 cut(s) 248, 424, 722
HpyCH4V TGCA 4 cut(s) 17, 211, 899, 934
HpyF10VI GCNNNNNNNGC 6 cut(s) 23, 32, 85, 317, 544, 773
HpyF3I CTNAG 4 cut(s) 322, 452, 483, 1031
HpySE526I ACGT 3 cut(s) 248, 424, 722
HspAI GCGC 2 cut(s) 668, 919
Kpn2I TCCGGA 1 cut(s) 961
KroI GCCGGC 1 cut(s) 664
KroNI GCCGGC 1 cut(s) 666
Kzo9I GATC 7 cut(s) 69, 256, 265, 276, 438, 516, 865
LmnI GCTCC 2 cut(s) 295, 807
Lsp1109I GCAGC 2 cut(s) 10, 486
LweI GCATC 4 cut(s) 4, 383, 408, 605
MaeI CTAG 4 cut(s) 27, 671, 810, 822
MaeII ACGT 3 cut(s) 248, 424, 722
MaeIII GTNAC 6 cut(s) 244, 385, 634, 711, 1120, 1172
MalI GATC 7 cut(s) 71, 258, 267, 278, 440, 518, 867
MboI GATC 7 cut(s) 69, 256, 265, 276, 438, 516, 865
MboII GAAGA 5 cut(s) 383, 499, 689, 1002, 1225
MflI RGATCY 3 cut(s) 276, 516, 865
MhlI GDGCHC 3 cut(s) 292, 659, 804
MluCI AATT 2 cut(s) 468, 575
MmeI TCCRAC 3 cut(s) 243, 708, 1281
MroI TCCGGA 1 cut(s) 961
MroNI GCCGGC 1 cut(s) 664
MseI TTAA 2 cut(s) 153, 1085
MslI CAYNNNNRTG 1 cut(s) 173
MspI CCGG 7 cut(s) 347, 407, 415, 665, 768, 962, 1091
MspR9I CCNGG 4 cut(s) 190, 769, 870, 923
Mva1269I GAATGC 2 cut(s) 484, 864
MvaI CCWGG 3 cut(s) 190, 870, 923
MvnI CGCG 1 cut(s) 744
MwoI GCNNNNNNNGC 6 cut(s) 23, 32, 85, 317, 544, 773
NaeI GCCGGC 1 cut(s) 666
NciI CCSGG 1 cut(s) 769
NcoI CCATGG 1 cut(s) 753
NdeII GATC 7 cut(s) 69, 256, 265, 276, 438, 516, 865
NgoMIV GCCGGC 1 cut(s) 664
NlaIV GGNNCC 4 cut(s) 239, 360, 663, 803
NmuCI GTSAC 4 cut(s) 244, 711, 1120, 1172
NspI RCATGY 1 cut(s) 644
NspV TTCGAA 1 cut(s) 856
PaeR7I CTCGAG 1 cut(s) 144
PagI TCATGA 1 cut(s) 943
PcsI WCGNNNNNNNCGW 1 cut(s) 280
PctI GAATGC 2 cut(s) 484, 864
PdiI GCCGGC 1 cut(s) 666
PfeI GAWTC 2 cut(s) 505, 1067
PflMI CCANNNNNTGG 2 cut(s) 869, 928
PinAI ACCGGT 1 cut(s) 346
PkrI GCNGC 3 cut(s) 25, 501, 746
Ppu21I YACGTR 1 cut(s) 723
PpuMI RGGWCCY 1 cut(s) 238
Psp5II RGGWCCY 1 cut(s) 238
Psp6I CCWGG 3 cut(s) 188, 868, 921
PspGI CCWGG 3 cut(s) 188, 868, 921
PspN4I GGNNCC 4 cut(s) 239, 360, 663, 803
PspPI GGNCC 2 cut(s) 238, 662
PspPPI RGGWCCY 1 cut(s) 238
PstNI CAGNNNCTG 2 cut(s) 779, 869
PsuI RGATCY 3 cut(s) 276, 516, 865
RsaI GTAC 5 cut(s) 332, 380, 741, 784, 1095
RsaNI GTAC 5 cut(s) 331, 379, 740, 783, 1094
RseI CAYNNNNRTG 1 cut(s) 173
SaqAI TTAA 2 cut(s) 153, 1085
SatI GCNGC 3 cut(s) 24, 500, 745
Sau3AI GATC 7 cut(s) 69, 256, 265, 276, 438, 516, 865
Sau96I GGNCC 2 cut(s) 238, 662
ScrFI CCNGG 4 cut(s) 190, 769, 870, 923
SduI GDGCHC 3 cut(s) 292, 659, 804
SfaNI GCATC 4 cut(s) 4, 383, 408, 605
Sfr274I CTCGAG 1 cut(s) 144
SfuI TTCGAA 1 cut(s) 856
SinI GGWCC 1 cut(s) 238
SlaI CTCGAG 1 cut(s) 144
SmiMI CAYNNNNRTG 1 cut(s) 173
SmlI CTYRAG 1 cut(s) 144
SmoI CTYRAG 1 cut(s) 144
Sse9I AATT 2 cut(s) 468, 575
SsiI CCGC 4 cut(s) 502, 547, 744, 798
SspMI CTAG 4 cut(s) 27, 671, 810, 822
StyD4I CCNGG 4 cut(s) 188, 767, 868, 921
StyI CCWWGG 3 cut(s) 369, 753, 846
TaaI ACNGT 1 cut(s) 739
TaiI ACGT 3 cut(s) 251, 427, 725
TaqI TCGA 3 cut(s) 72, 145, 856
TasI AATT 2 cut(s) 468, 575
TauI GCSGC 1 cut(s) 747
TfiI GAWTC 2 cut(s) 505, 1067
Tru1I TTAA 2 cut(s) 153, 1085
Tru9I TTAA 2 cut(s) 153, 1085
TseFI GTSAC 4 cut(s) 244, 711, 1120, 1172
TseI GCWGC 2 cut(s) 23, 499
Tsp45I GTSAC 4 cut(s) 244, 711, 1120, 1172
TspDTI ATGAA 6 cut(s) 157, 690, 702, 896, 932, 1247
TspGWI ACGGA 1 cut(s) 282
Van91I CCANNNNNTGG 2 cut(s) 869, 928
VpaK11BI GGWCC 1 cut(s) 238
XapI RAATTY 1 cut(s) 575
XceI RCATGY 1 cut(s) 644
XcmI CCANNNNNNNNNTGG 1 cut(s) 760
XhoI CTCGAG 1 cut(s) 144
XspI CTAG 4 cut(s) 27, 671, 810, 822
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.