Rmu_sc0008373.1_g000008

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008373.1
OG0000187
Physical Location & Seq
Forward (+)
23335 .. 24621
1287 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008373.1_g000008.1.cds

Sequence Viewer

Length: 1137 bp
atgtcttttgttgatgcaatggcttctagactcgcctcctctcttgctatagctgaaggcaagaggcagattgatttgctacctaagcagggtaagggtttgcgacaggcaaacgtattcttggtgggcaagctcctcaccgcttgggatttcaaggtggaggaagcagaagggcagagggtgttattcacaatgtcggatccgtctgatcgagttcgaatatggcggggtgccccatgggggtataatcacgcgccggtggctctagctttgtatgatggtatcatgccggtggagaaagtgcccttagccatggcatcatattggataactcttcagggaataccaccagcgtttcgatctgaacgtgtcatgactatgatcggctacacgctgggggattttcaggaaattgataagaatgctaagaagactgggaaactctggattaggcttttcggaagatgctctgtatgcggagtagtcacacatgtgggtctaccatgctccgaaccggcgttggatgaagacgatgatgaagctgagagaattgttttggggtcccagaacacggtgtcggagatgagtggtgggggctcgccgggagtttgggcggggtcaacatcgggacatgctagtggtagtgggctcaatactggtgtaagagctagggttaccaccccacgtccaccattgatatttcggactccagatcctggtccgagtggggaaccatgtttgaatatcttgtttccaaagcagaagagacatgttgtggtgcgtgaacttcaggggacagcggaaactccagaacgcatcactggcaagcgtcgagccagagaagaaagcctgactatctcccctaagaaactgaaattgagcttggcggtaggcaagagaaatctcattcttgattctgcaaaccttggattggaccctatacaggaggcgactcattctgggagtatgaagcggaagagaggacaaccttctggtagtagaaataagtcgtcgtgtgatggcaagcagcaaacctcaaaacatggtgagggtaaggcaaagaataagtccccaacgaagaaacaatctgtggggaaacactccaacccgacagggaaggagttggctcttttttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

378

Amino Acids

40.97

Weight (kDa)

9.79

Isoelectric Point (pI)

48.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000187)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20170 FvH4_4g06831
rosa_chinensis RchiOBHm_Chr1g0321991 RchiOBHm_Chr2g0161811
rosa_laevigata RLG00000015375 RLG00000018377
rosa_multiflora Rmu_co8011754.1_g000001 Rmu_co8019986.1_g000001 Rmu_co8067766.1_g000001 Rmu_co8156128.1_g000001 Rmu_co8219154.1_g000003 Rmu_co8297235.1_g000001 Rmu_co8345223.1_g000001 Rmu_co8364775.1_g000001 Rmu_co8465075.1_g000001 Rmu_sc0000007.1_g000002 Rmu_sc0000054.1_g000015 Rmu_sc0000054.1_g000023 Rmu_sc0000145.1_g000010 Rmu_sc0000166.1_g000006 Rmu_sc0000218.1_g000012 Rmu_sc0000339.1_g000008 Rmu_sc0000342.1_g000015 Rmu_sc0000464.1_g000008 Rmu_sc0000620.1_g000003 Rmu_sc0000638.1_g000017 Rmu_sc0000890.1_g000007 Rmu_sc0000894.1_g000024 Rmu_sc0000909.1_g000010 Rmu_sc0000928.1_g000020 Rmu_sc0000977.1_g000007 Rmu_sc0001022.1_g000003 Rmu_sc0001035.1_g000037 Rmu_sc0001060.1_g000008 Rmu_sc0001168.1_g000005 Rmu_sc0001173.1_g000022 Rmu_sc0001179.1_g000016 Rmu_sc0001408.1_g000003 Rmu_sc0001455.1_g000005 Rmu_sc0001484.1_g000008 Rmu_sc0001585.1_g000010 Rmu_sc0001702.1_g000030 Rmu_sc0001755.1_g000063 Rmu_sc0001903.1_g000009 Rmu_sc0002099.1_g000001 Rmu_sc0002142.1_g000012 Rmu_sc0002158.1_g000014 Rmu_sc0002307.1_g000009 Rmu_sc0002358.1_g000013 Rmu_sc0002421.1_g000002 Rmu_sc0002426.1_g000003 Rmu_sc0002438.1_g000001 Rmu_sc0002461.1_g000001 Rmu_sc0002508.1_g000003 Rmu_sc0002532.1_g000056 Rmu_sc0002583.1_g000002 Rmu_sc0002927.1_g000033 Rmu_sc0003033.1_g000040 Rmu_sc0003271.1_g000006 Rmu_sc0003381.1_g000006 Rmu_sc0003507.1_g000007 Rmu_sc0003578.1_g000003 Rmu_sc0003693.1_g000004 Rmu_sc0003693.1_g000005 Rmu_sc0003704.1_g000003 Rmu_sc0003840.1_g000002 Rmu_sc0004084.1_g000026 Rmu_sc0004193.1_g000007 Rmu_sc0004234.1_g000033 Rmu_sc0004235.1_g000025 Rmu_sc0004435.1_g000006 Rmu_sc0004727.1_g000003 Rmu_sc0004741.1_g000001 Rmu_sc0004926.1_g000004 Rmu_sc0005365.1_g000001 Rmu_sc0005392.1_g000007 Rmu_sc0005415.1_g000001 Rmu_sc0005539.1_g000007 Rmu_sc0005708.1_g000017 Rmu_sc0006317.1_g000007 Rmu_sc0006453.1_g000054 Rmu_sc0006536.1_g000004 Rmu_sc0006740.1_g000022 Rmu_sc0006763.1_g000012 Rmu_sc0007115.1_g000002 Rmu_sc0007115.1_g000010 Rmu_sc0007129.1_g000017 Rmu_sc0007131.1_g000010 Rmu_sc0008373.1_g000008 Rmu_sc0009005.1_g000008 Rmu_sc0009252.1_g000007 Rmu_sc0009599.1_g000022 Rmu_sc0009785.1_g000027 Rmu_sc0009891.1_g000003 Rmu_sc0010099.1_g000010 Rmu_sc0010266.1_g000008 Rmu_sc0010334.1_g000003 Rmu_sc0010381.1_g000001 Rmu_sc0010496.1_g000003 Rmu_sc0010496.1_g000004 Rmu_sc0010546.1_g000003 Rmu_sc0011482.1_g000006 Rmu_sc0011875.1_g000010 Rmu_sc0011917.1_g000006 Rmu_sc0012293.1_g000004 Rmu_sc0012847.1_g000003 Rmu_sc0013773.1_g000001 Rmu_sc0016060.1_g000003 Rmu_sc0016170.1_g000013 Rmu_sc0016393.1_g000002 Rmu_sc0017589.1_g000001 Rmu_sc0017786.1_g000005 Rmu_sc0018326.1_g000002 Rmu_sc0020760.1_g000001 Rmu_sc0021262.1_g000003 Rmu_sc0023851.1_g000002 Rmu_sc0024044.1_g000001 Rmu_sc0026820.1_g000001 Rmu_sc0032306.1_g000001 Rmu_sc0035666.1_g000001 Rmu_sc0036881.1_g000001 Rmu_sc0037030.1_g000001 Rmu_sc0037158.1_g000001 Rmu_ssc0000016.1_g000002 Rmu_ssc0000044.1_g000012 Rmu_ssc0000044.1_g000014 Rmu_ssc0000050.1_g000064 Rmu_ssc0000064.1_g000022 Rmu_ssc0000154.1_g000037 Rmu_ssc0000178.1_g000013 Rmu_ssc0000217.1_g000022 Rmu_ssc0000392.1_g000004
rosa_roxburghii Rroxscaffold_3G00242000 Rroxscaffold_3G00242530 Rroxscaffold_6G00406010
rosa_rugosa Rorug01G0062000 Rorug02G0224000 Rorug02G0262900 Rorug02G0263000 Rorug02G0358900 Rorug02G0360500 Rorug02G0378500.1 Rorug02G0378600 Rorug02G0394700 Rorug03G0122900 Rorug03G0254600 Rorug03G0254700 Rorug03G0254800 Rorug04G0042200.1 Rorug04G0378100 Rorug05G0053400 Rorug05G0238600 Rorug05G0364500 Rorug05G0562000 Rorug06G0089300 Rorug06G0089400 Rorug06G0145700 Rorug07G0111600 Rorug07G0229500.1 Rorug07G0287600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 230
AccB7I CCANNNNNTGG 1 cut(s) 716
AccI GTMKAC 1 cut(s) 499
AccII CGCG 1 cut(s) 254
AciI CCGC 7 cut(s) 141, 226, 477, 614, 800, 887, 973
AclWI GGATC 3 cut(s) 194, 207, 707
AcuI CTGAAG 3 cut(s) 75, 320, 773
AfiI CCNNNNNNNGG 6 cut(s) 89, 240, 571, 716, 931, 943
AflIII ACRYGT 3 cut(s) 367, 490, 769
AgsI TTSAA 2 cut(s) 154, 742
AjiI CACGTC 1 cut(s) 686
AjnI CCWGG 1 cut(s) 715
AjuI GAANNNNNNNTTGG 2 cut(s) 866, 898
AleI CACNNNNGTG 1 cut(s) 491
AluBI AGCT 6 cut(s) 53, 133, 269, 542, 668, 882
AluI AGCT 6 cut(s) 53, 133, 269, 542, 668, 882
Alw26I GTCTC 1 cut(s) 760
AlwI GGATC 3 cut(s) 194, 207, 707
AlwNI CAGNNNCTG 1 cut(s) 716
ApeKI GCWGC 1 cut(s) 1027
ArsI GACNNNNNNTTYG 2 cut(s) 1052, 1084
AspLEI GCGC 1 cut(s) 256
AspS9I GGNCC 3 cut(s) 561, 719, 934
AsuC2I CCSGG 1 cut(s) 603
AsuHPI GGTGA 2 cut(s) 130, 1058
AsuII TTCGAA 1 cut(s) 217
AvaII GGWCC 3 cut(s) 561, 719, 934
BaeGI GKGCMC 2 cut(s) 235, 306
BamHI GGATCC 1 cut(s) 199
BanI GGYRCC 1 cut(s) 230
BanII GRGCYC 2 cut(s) 599, 651
BbsI GAAGAC 2 cut(s) 437, 534
BbvI GCAGC 1 cut(s) 1039
BccI CCATC 2 cut(s) 272, 1013
BciT130I CCWGG 1 cut(s) 717
BcnI CCSGG 1 cut(s) 603
BcoDI GTCTC 1 cut(s) 760
BfaI CTAG 4 cut(s) 27, 266, 636, 669
BfmI CTRYAG 1 cut(s) 48
BisI GCNGC 1 cut(s) 1028
BlsI GCNGC 1 cut(s) 1029
Bme1390I CCNGG 2 cut(s) 603, 717
Bme18I GGWCC 3 cut(s) 561, 719, 934
BmgBI CACGTC 1 cut(s) 686
BmgT120I GGNCC 3 cut(s) 561, 719, 934
BmiI GGNNCC 6 cut(s) 201, 232, 562, 563, 732, 936
BmrFI CCNGG 2 cut(s) 603, 717
BmrI ACTGGG 1 cut(s) 444
BmsI GCATC 4 cut(s) 4, 326, 455, 825
BmuI ACTGGG 1 cut(s) 444
BpiI GAAGAC 2 cut(s) 437, 534
BpmI CTGGAG 2 cut(s) 693, 792
Bpu10I CCTNAGC 2 cut(s) 84, 307
Bpu14I TTCGAA 1 cut(s) 217
BpuMI CCSGG 1 cut(s) 603
BsaJI CCNNGG 3 cut(s) 236, 312, 925
Bsc4I CCNNNNNNNGG 6 cut(s) 89, 240, 571, 716, 931, 943
Bse118I RCCGGY 3 cut(s) 256, 289, 514
Bse1I ACTGG 3 cut(s) 439, 661, 826
Bse3DI GCAATG 1 cut(s) 24
BseBI CCWGG 1 cut(s) 717
BseDI CCNNGG 3 cut(s) 236, 312, 925
BseGI GGATG 1 cut(s) 529
BseLI CCNNNNNNNGG 6 cut(s) 89, 240, 571, 716, 931, 943
BseMI GCAATG 1 cut(s) 24
BseMII CTCAG 1 cut(s) 534
BseNI ACTGG 3 cut(s) 439, 661, 826
BseRI GAGGAG 2 cut(s) 28, 125
BseSI GKGCMC 2 cut(s) 235, 306
BseXI GCAGC 1 cut(s) 1039
BseYI CCCAGC 1 cut(s) 394
Bsh1236I CGCG 1 cut(s) 254
BshNI GGYRCC 1 cut(s) 230
BsiSI CCGG 4 cut(s) 257, 290, 515, 602
BslFI GGGAC 4 cut(s) 547, 642, 808, 1054
BslI CCNNNNNNNGG 6 cut(s) 89, 240, 571, 716, 931, 943
BsmAI GTCTC 1 cut(s) 760
BsmFI GGGAC 4 cut(s) 547, 642, 808, 1054
BsmI GAATGC 1 cut(s) 427
Bsp119I TTCGAA 1 cut(s) 217
Bsp1286I GDGCHC 4 cut(s) 235, 306, 599, 651
Bsp143I GATC 5 cut(s) 199, 208, 359, 381, 712
Bsp19I CCATGG 2 cut(s) 236, 312
BspACI CCGC 7 cut(s) 141, 226, 477, 614, 800, 887, 973
BspCNI CTCAG 1 cut(s) 535
BspFNI CGCG 1 cut(s) 254
BspHI TCATGA 1 cut(s) 372
BspLI GGNNCC 6 cut(s) 201, 232, 562, 563, 732, 936
BspPI GGATC 3 cut(s) 194, 207, 707
BspT104I TTCGAA 1 cut(s) 217
BspT107I GGYRCC 1 cut(s) 230
BsrDI GCAATG 1 cut(s) 24
BsrFI RCCGGY 3 cut(s) 256, 289, 514
BsrI ACTGG 3 cut(s) 439, 661, 826
BssAI RCCGGY 3 cut(s) 256, 289, 514
BssECI CCNNGG 3 cut(s) 236, 312, 925
BssMI GATC 5 cut(s) 199, 208, 359, 381, 712
BssT1I CCWWGG 3 cut(s) 236, 312, 925
Bst2UI CCWGG 1 cut(s) 717
Bst4CI ACNGT 1 cut(s) 574
Bst6I CTCTTC 3 cut(s) 339, 758, 971
BstBI TTCGAA 1 cut(s) 217
BstC8I GCNNGC 4 cut(s) 131, 599, 827, 1025
BstDEI CTNAG 5 cut(s) 84, 307, 426, 543, 864
BstDSI CCRYGG 2 cut(s) 236, 312
BstEII GGTNACC 1 cut(s) 673
BstF5I GGATG 1 cut(s) 529
BstFNI CGCG 1 cut(s) 254
BstHHI GCGC 1 cut(s) 256
BstKTI GATC 5 cut(s) 202, 211, 362, 384, 715
BstMAI GTCTC 1 cut(s) 760
BstMBI GATC 5 cut(s) 199, 208, 359, 381, 712
BstMWI GCNNNNNNNGC 4 cut(s) 85, 260, 474, 822
BstNI CCWGG 1 cut(s) 717
BstNSI RCATGY 3 cut(s) 494, 635, 773
BstPI GGTNACC 1 cut(s) 673
BstSCI CCNGG 2 cut(s) 601, 715
BstSFI CTRYAG 1 cut(s) 48
BstSLI GKGCMC 2 cut(s) 235, 306
BstUI CGCG 1 cut(s) 254
BstV1I GCAGC 1 cut(s) 1039
BstV2I GAAGAC 2 cut(s) 437, 534
BstX2I RGATCY 2 cut(s) 199, 712
BstYI RGATCY 2 cut(s) 199, 712
BtgI CCRYGG 2 cut(s) 236, 312
BtrI CACGTC 1 cut(s) 686
BtsCI GGATG 1 cut(s) 529
BtsIMutI CAGTG 1 cut(s) 819
Cac8I GCNNGC 4 cut(s) 131, 599, 827, 1025
CaiI CAGNNNCTG 1 cut(s) 716
CciI TCATGA 1 cut(s) 372
CfoI GCGC 1 cut(s) 256
Cfr10I RCCGGY 3 cut(s) 256, 289, 514
Cfr13I GGNCC 3 cut(s) 561, 719, 934
CseI GACGC 1 cut(s) 818
DdeI CTNAG 5 cut(s) 84, 307, 426, 543, 864
DpnI GATC 5 cut(s) 201, 210, 361, 383, 714
DpnII GATC 5 cut(s) 199, 208, 359, 381, 712
Eam1104I CTCTTC 3 cut(s) 339, 758, 971
EarI CTCTTC 3 cut(s) 339, 758, 971
Eco130I CCWWGG 3 cut(s) 236, 312, 925
Eco24I GRGCYC 2 cut(s) 599, 651
Eco47I GGWCC 3 cut(s) 561, 719, 934
Eco57I CTGAAG 3 cut(s) 75, 320, 773
Eco91I GGTNACC 1 cut(s) 673
EcoO109I RGGNCCY 1 cut(s) 561
EcoO65I GGTNACC 1 cut(s) 673
EcoRII CCWGG 1 cut(s) 715
EcoT14I CCWWGG 3 cut(s) 236, 312, 925
EcoT38I GRGCYC 2 cut(s) 599, 651
ErhI CCWWGG 3 cut(s) 236, 312, 925
FaqI GGGAC 4 cut(s) 547, 642, 808, 1054
FauI CCCGC 2 cut(s) 219, 607
FblI GTMKAC 1 cut(s) 499
Fnu4HI GCNGC 1 cut(s) 1028
FokI GGATG 1 cut(s) 536
FriOI GRGCYC 2 cut(s) 599, 651
Fsp4HI GCNGC 1 cut(s) 1028
FspBI CTAG 4 cut(s) 27, 266, 636, 669
GlaI GCGC 1 cut(s) 255
GluI GCNGC 1 cut(s) 1028
GsaI CCCAGC 1 cut(s) 398
GsuI CTGGAG 2 cut(s) 693, 792
HapII CCGG 4 cut(s) 257, 290, 515, 602
HgaI GACGC 1 cut(s) 818
HhaI GCGC 1 cut(s) 256
Hin6I GCGC 1 cut(s) 254
HinP1I GCGC 1 cut(s) 254
HincII GTYRAC 1 cut(s) 621
HindII GTYRAC 1 cut(s) 621
HinfI GANTC 4 cut(s) 30, 706, 914, 952
HpaII CCGG 4 cut(s) 257, 290, 515, 602
HphI GGTGA 2 cut(s) 130, 1058
Hpy166II GTNNAC 4 cut(s) 500, 621, 689, 785
Hpy188I TCNGA 8 cut(s) 199, 208, 364, 461, 511, 580, 705, 723
Hpy188III TCNNGA 8 cut(s) 27, 373, 407, 445, 627, 710, 809, 911
Hpy8I GTNNAC 4 cut(s) 500, 621, 689, 785
Hpy99I CGWCG 2 cut(s) 834, 1015
HpyAV CCTTC 4 cut(s) 50, 164, 999, 1111
HpyCH4III ACNGT 1 cut(s) 574
HpyCH4IV ACGT 3 cut(s) 114, 367, 685
HpyCH4V TGCA 2 cut(s) 17, 920
HpyF10VI GCNNNNNNNGC 4 cut(s) 85, 260, 474, 822
HpyF3I CTNAG 5 cut(s) 84, 307, 426, 543, 864
HpySE526I ACGT 3 cut(s) 114, 367, 685
HspAI GCGC 1 cut(s) 254
KflI GGGWCCC 1 cut(s) 561
Kzo9I GATC 5 cut(s) 199, 208, 359, 381, 712
LmnI GCTCC 2 cut(s) 138, 512
Lsp1109I GCAGC 1 cut(s) 1039
LweI GCATC 4 cut(s) 4, 326, 455, 825
MaeI CTAG 4 cut(s) 27, 266, 636, 669
MaeII ACGT 3 cut(s) 114, 367, 685
MaeIII GTNAC 2 cut(s) 484, 673
MalI GATC 5 cut(s) 201, 210, 361, 383, 714
MboI GATC 5 cut(s) 199, 208, 359, 381, 712
MboII GAAGA 8 cut(s) 326, 442, 474, 539, 775, 854, 988, 1090
MflI RGATCY 2 cut(s) 199, 712
MhlI GDGCHC 4 cut(s) 235, 306, 599, 651
MluCI AATT 3 cut(s) 411, 549, 875
MlyI GAGTC 3 cut(s) 24, 700, 946
MmeI TCCRAC 4 cut(s) 177, 501, 558, 1128
MslI CAYNNNNRTG 4 cut(s) 290, 377, 491, 636
MspA1I CMGCKG 1 cut(s) 800
MspI CCGG 4 cut(s) 257, 290, 515, 602
MspR9I CCNGG 2 cut(s) 603, 717
Mva1269I GAATGC 1 cut(s) 427
MvaI CCWGG 1 cut(s) 717
MvnI CGCG 1 cut(s) 254
MwoI GCNNNNNNNGC 4 cut(s) 85, 260, 474, 822
NciI CCSGG 1 cut(s) 603
NcoI CCATGG 2 cut(s) 236, 312
NdeII GATC 5 cut(s) 199, 208, 359, 381, 712
NlaIV GGNNCC 6 cut(s) 201, 232, 562, 563, 732, 936
NmuCI GTSAC 1 cut(s) 484
NspI RCATGY 3 cut(s) 494, 635, 773
NspV TTCGAA 1 cut(s) 217
OliI CACNNNNGTG 1 cut(s) 491
PagI TCATGA 1 cut(s) 372
PciI ACATGT 2 cut(s) 490, 769
PcsI WCGNNNNNNNCGW 1 cut(s) 364
PctI GAATGC 1 cut(s) 427
PfeI GAWTC 1 cut(s) 914
PflMI CCANNNNNTGG 1 cut(s) 716
PkrI GCNGC 1 cut(s) 1029
PleI GAGTC 3 cut(s) 24, 700, 946
PpsI GAGTC 3 cut(s) 24, 700, 946
PpuMI RGGWCCY 1 cut(s) 561
PscI ACATGT 2 cut(s) 490, 769
Psp5II RGGWCCY 1 cut(s) 561
Psp6I CCWGG 1 cut(s) 715
PspEI GGTNACC 1 cut(s) 673
PspFI CCCAGC 1 cut(s) 394
PspGI CCWGG 1 cut(s) 715
PspN4I GGNNCC 6 cut(s) 201, 232, 562, 563, 732, 936
PspPI GGNCC 3 cut(s) 561, 719, 934
PspPPI RGGWCCY 1 cut(s) 561
PstNI CAGNNNCTG 1 cut(s) 716
PsuI RGATCY 2 cut(s) 199, 712
RseI CAYNNNNRTG 4 cut(s) 290, 377, 491, 636
SatI GCNGC 1 cut(s) 1028
Sau3AI GATC 5 cut(s) 199, 208, 359, 381, 712
Sau96I GGNCC 3 cut(s) 561, 719, 934
SchI GAGTC 3 cut(s) 24, 700, 946
ScrFI CCNGG 2 cut(s) 603, 717
SduI GDGCHC 4 cut(s) 235, 306, 599, 651
SfaNI GCATC 4 cut(s) 4, 326, 455, 825
SfcI CTRYAG 1 cut(s) 48
SfuI TTCGAA 1 cut(s) 217
SgrAI CRCCGGYG 1 cut(s) 256
SinI GGWCC 3 cut(s) 561, 719, 934
SmiMI CAYNNNNRTG 4 cut(s) 290, 377, 491, 636
Sse9I AATT 3 cut(s) 411, 549, 875
SsiI CCGC 7 cut(s) 141, 226, 477, 614, 800, 887, 973
SspMI CTAG 4 cut(s) 27, 266, 636, 669
StyD4I CCNGG 2 cut(s) 601, 715
StyI CCWWGG 3 cut(s) 236, 312, 925
TaaI ACNGT 1 cut(s) 574
TaiI ACGT 3 cut(s) 117, 370, 688
TaqI TCGA 4 cut(s) 211, 217, 358, 832
TasI AATT 3 cut(s) 411, 549, 875
TfiI GAWTC 1 cut(s) 914
TscAI CASTG 1 cut(s) 826
TseFI GTSAC 1 cut(s) 484
TseI GCWGC 1 cut(s) 1027
Tsp45I GTSAC 1 cut(s) 484
TspDTI ATGAA 3 cut(s) 540, 552, 983
TspGWI ACGGA 1 cut(s) 192
TspRI CASTG 1 cut(s) 826
Van91I CCANNNNNTGG 1 cut(s) 716
VpaK11BI GGWCC 3 cut(s) 561, 719, 934
XbaI TCTAGA 1 cut(s) 26
XceI RCATGY 3 cut(s) 494, 635, 773
XmiI GTMKAC 1 cut(s) 499
XspI CTAG 4 cut(s) 27, 266, 636, 669
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.