ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 95 |
| AciI | CCGC | 2 cut(s) | 91, 329 |
| AclWI | GGATC | 1 cut(s) | 72 |
| AcuI | CTGAAG | 1 cut(s) | 185 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 105, 178 |
| AflIII | ACRYGT | 1 cut(s) | 255 |
| AgeI | ACCGGT | 1 cut(s) | 154 |
| AgsI | TTSAA | 1 cut(s) | 352 |
| AleI | CACNNNNGTG | 1 cut(s) | 122 |
| AluBI | AGCT | 2 cut(s) | 134, 412 |
| AluI | AGCT | 2 cut(s) | 134, 412 |
| AlwI | GGATC | 1 cut(s) | 72 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 398 |
| AsiGI | ACCGGT | 1 cut(s) | 154 |
| BaeGI | GKGCMC | 2 cut(s) | 100, 171 |
| BanI | GGYRCC | 1 cut(s) | 95 |
| BbsI | GAAGAC | 1 cut(s) | 302 |
| BccI | CCATC | 2 cut(s) | 137, 223 |
| BfaI | CTAG | 3 cut(s) | 77, 131, 173 |
| BmiI | GGNNCC | 1 cut(s) | 97 |
| BmrI | ACTGGG | 1 cut(s) | 309 |
| BmsI | GCATC | 2 cut(s) | 191, 413 |
| BmuI | ACTGGG | 1 cut(s) | 309 |
| BpiI | GAAGAC | 1 cut(s) | 302 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 410 |
| BsaJI | CCNNGG | 2 cut(s) | 101, 177 |
| BsaWI | WCCGGW | 1 cut(s) | 154 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 6, 36 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 105, 178 |
| Bse118I | RCCGGY | 1 cut(s) | 154 |
| Bse1I | ACTGG | 2 cut(s) | 304, 314 |
| Bse3DI | GCAATG | 1 cut(s) | 341 |
| BseDI | CCNNGG | 2 cut(s) | 101, 177 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 105, 178 |
| BseMI | GCAATG | 1 cut(s) | 341 |
| BseNI | ACTGG | 2 cut(s) | 304, 314 |
| BseSI | GKGCMC | 2 cut(s) | 100, 171 |
| BshNI | GGYRCC | 1 cut(s) | 95 |
| BshTI | ACCGGT | 1 cut(s) | 154 |
| BsiSI | CCGG | 1 cut(s) | 155 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 105, 178 |
| BsmI | GAATGC | 1 cut(s) | 292 |
| Bsp1286I | GDGCHC | 2 cut(s) | 100, 171 |
| Bsp143I | GATC | 3 cut(s) | 64, 73, 246 |
| Bsp19I | CCATGG | 2 cut(s) | 101, 177 |
| BspACI | CCGC | 2 cut(s) | 91, 329 |
| BspHI | TCATGA | 1 cut(s) | 237 |
| BspLI | GGNNCC | 1 cut(s) | 97 |
| BspPI | GGATC | 1 cut(s) | 72 |
| BspT107I | GGYRCC | 1 cut(s) | 95 |
| BsrDI | GCAATG | 1 cut(s) | 341 |
| BsrFI | RCCGGY | 1 cut(s) | 154 |
| BsrI | ACTGG | 2 cut(s) | 304, 314 |
| BssAI | RCCGGY | 1 cut(s) | 154 |
| BssECI | CCNNGG | 2 cut(s) | 101, 177 |
| BssMI | GATC | 3 cut(s) | 64, 73, 246 |
| BssT1I | CCWWGG | 2 cut(s) | 101, 177 |
| Bst6I | CTCTTC | 1 cut(s) | 204 |
| BstC8I | GCNNGC | 1 cut(s) | 6 |
| BstDEI | CTNAG | 1 cut(s) | 291 |
| BstDSI | CCRYGG | 2 cut(s) | 101, 177 |
| BstKTI | GATC | 3 cut(s) | 67, 76, 249 |
| BstMBI | GATC | 3 cut(s) | 64, 73, 246 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 352 |
| BstSLI | GKGCMC | 2 cut(s) | 100, 171 |
| BstV2I | GAAGAC | 1 cut(s) | 302 |
| BstX2I | RGATCY | 1 cut(s) | 64 |
| BstYI | RGATCY | 1 cut(s) | 64 |
| BtgI | CCRYGG | 2 cut(s) | 101, 177 |
| BtsI | GCAGTG | 2 cut(s) | 15, 362 |
| BtsIMutI | CAGTG | 3 cut(s) | 15, 307, 362 |
| Cac8I | GCNNGC | 1 cut(s) | 6 |
| CciI | TCATGA | 1 cut(s) | 237 |
| Cfr10I | RCCGGY | 1 cut(s) | 154 |
| CspAI | ACCGGT | 1 cut(s) | 154 |
| CviAII | CATG | 4 cut(s) | 102, 178, 238, 244 |
| CviJI | RGCY | 5 cut(s) | 128, 134, 176, 252, 412 |
| CviKI_1 | RGCY | 5 cut(s) | 128, 134, 176, 252, 412 |
| DdeI | CTNAG | 1 cut(s) | 291 |
| DpnI | GATC | 3 cut(s) | 66, 75, 248 |
| DpnII | GATC | 3 cut(s) | 64, 73, 246 |
| Eam1104I | CTCTTC | 1 cut(s) | 204 |
| EarI | CTCTTC | 1 cut(s) | 204 |
| Eco130I | CCWWGG | 2 cut(s) | 101, 177 |
| Eco57I | CTGAAG | 1 cut(s) | 185 |
| EcoT14I | CCWWGG | 2 cut(s) | 101, 177 |
| ErhI | CCWWGG | 2 cut(s) | 101, 177 |
| FaeI | CATG | 4 cut(s) | 105, 181, 241, 247 |
| FatI | CATG | 4 cut(s) | 101, 177, 237, 243 |
| FauI | CCCGC | 1 cut(s) | 84 |
| FspBI | CTAG | 3 cut(s) | 77, 131, 173 |
| HapII | CCGG | 1 cut(s) | 155 |
| Hin1II | CATG | 4 cut(s) | 105, 181, 241, 247 |
| HindIII | AAGCTT | 1 cut(s) | 410 |
| HpaII | CCGG | 1 cut(s) | 155 |
| Hpy188I | TCNGA | 4 cut(s) | 64, 73, 84, 229 |
| Hpy188III | TCNNGA | 3 cut(s) | 238, 272, 418 |
| HpyCH4IV | ACGT | 1 cut(s) | 257 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 352 |
| HpyF3I | CTNAG | 1 cut(s) | 291 |
| HpySE526I | ACGT | 1 cut(s) | 257 |
| Hsp92II | CATG | 4 cut(s) | 105, 181, 241, 247 |
| Kzo9I | GATC | 3 cut(s) | 64, 73, 246 |
| LpnPI | CCDG | 7 cut(s) | 107, 168, 188, 236, 257, 285, 295 |
| LweI | GCATC | 2 cut(s) | 191, 413 |
| MaeI | CTAG | 3 cut(s) | 77, 131, 173 |
| MaeII | ACGT | 1 cut(s) | 257 |
| MalI | GATC | 3 cut(s) | 66, 75, 248 |
| MboI | GATC | 3 cut(s) | 64, 73, 246 |
| MboII | GAAGA | 3 cut(s) | 191, 307, 383 |
| MflI | RGATCY | 1 cut(s) | 64 |
| MhlI | GDGCHC | 2 cut(s) | 100, 171 |
| MluCI | AATT | 2 cut(s) | 276, 395 |
| MmeI | TCCRAC | 1 cut(s) | 42 |
| MnlI | CCTC | 3 cut(s) | 8, 19, 36 |
| MslI | CAYNNNNRTG | 3 cut(s) | 122, 155, 242 |
| MspA1I | CMGCKG | 1 cut(s) | 331 |
| MspI | CCGG | 1 cut(s) | 155 |
| Mva1269I | GAATGC | 1 cut(s) | 292 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 352 |
| NcoI | CCATGG | 2 cut(s) | 101, 177 |
| NdeII | GATC | 3 cut(s) | 64, 73, 246 |
| NlaIII | CATG | 4 cut(s) | 105, 181, 241, 247 |
| NlaIV | GGNNCC | 1 cut(s) | 97 |
| OliI | CACNNNNGTG | 1 cut(s) | 122 |
| PagI | TCATGA | 1 cut(s) | 237 |
| PctI | GAATGC | 1 cut(s) | 292 |
| PinAI | ACCGGT | 1 cut(s) | 154 |
| PspN4I | GGNNCC | 1 cut(s) | 97 |
| PsuI | RGATCY | 1 cut(s) | 64 |
| RseI | CAYNNNNRTG | 3 cut(s) | 122, 155, 242 |
| Sau3AI | GATC | 3 cut(s) | 64, 73, 246 |
| SduI | GDGCHC | 2 cut(s) | 100, 171 |
| SetI | ASST | 3 cut(s) | 136, 260, 414 |
| SfaNI | GCATC | 2 cut(s) | 191, 413 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 122, 155, 242 |
| Sse9I | AATT | 2 cut(s) | 276, 395 |
| SsiI | CCGC | 2 cut(s) | 91, 329 |
| SspMI | CTAG | 3 cut(s) | 77, 131, 173 |
| StyI | CCWWGG | 2 cut(s) | 101, 177 |
| TaiI | ACGT | 1 cut(s) | 260 |
| TaqI | TCGA | 1 cut(s) | 417 |
| TasI | AATT | 2 cut(s) | 276, 395 |
| TscAI | CASTG | 3 cut(s) | 15, 314, 362 |
| TspDTI | ATGAA | 1 cut(s) | 390 |
| TspRI | CASTG | 3 cut(s) | 15, 314, 362 |
| XspI | CTAG | 3 cut(s) | 77, 131, 173 |