Rmu_sc0000894.1_g000024

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000894.1
OG0000187
Physical Location & Seq
Reverse (-)
108565 .. 109713
1149 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000894.1_g000024.1.cds

Sequence Viewer

Length: 1149 bp
atgtcttctgttgatgcaatggctgctagactagcctcctctcttgctatcgctgaaggcaagaggcagattgatttgcgacctacgcaaggtaagggtttacgacaggcaaacgtattcttggtgggcaagctcctcaccgcttgggatttcaaggttaggtcattcatggggttgtttcgcaacgcctgtagggtaaatgggtcgttgcaggtggaggaagcggaaggacaaagggtgttattcacgctgtcggatccgtctgatcgagttcggatatggcggggtgccccattggggtataatcacgcgtctatggctctagctttgtatgatggtatcatgccggtggagaaagtgcccctagccatggcatcatattggataactcttcagggaataccaccagcgtttcggtctgaacgtgtcatgaccatgatccgctacacgctgggggattttcaggaaattgataagaatgctaagaagactgggaaactccggattacggttgagatacctttgaataaaccattgcctttcaagcggtggtacttggtggaagatgcggtcgagttttgctgtcaattccgttatgacaagcttttcggaagatgctctgtatgtgcattagtcacacatgtgggtttgccatgctccggacaggcgctggatgaagacgatgatgacaccccgtgtccacagttggtatttcggactccagatcctggtccgagtggggaaccatgtttgaatgctttgtttccaaagcagaagcgacttgttgtggtgcgtgaacttcaggggacagcggaaactccagaacgtatcactggcaagcgtcgaaacagagacgacagcctgactatctcccctaagaaactgaaattgagtttggcggtaggtaagagcaatctcattcttgattctgaaaagcttggcctggaccctatacaggaggagactcattctgggagtatgaagtggaagcgaggacgactttctggcagtagaaataagtcgtcgtctagtggcaagcagcagacctcaaagcatggtgagggtaaggagaagaataagtctccaacaatgaagcagtctgtggggaaacactccaacccgaaagggaaggagttggctcttttttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

382

Amino Acids

42.46

Weight (kDa)

9.63

Isoelectric Point (pI)

43.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000187)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20170 FvH4_4g06831
rosa_chinensis RchiOBHm_Chr1g0321991 RchiOBHm_Chr2g0161811
rosa_laevigata RLG00000015375 RLG00000018377
rosa_multiflora Rmu_co8011754.1_g000001 Rmu_co8019986.1_g000001 Rmu_co8067766.1_g000001 Rmu_co8156128.1_g000001 Rmu_co8219154.1_g000003 Rmu_co8297235.1_g000001 Rmu_co8345223.1_g000001 Rmu_co8364775.1_g000001 Rmu_co8465075.1_g000001 Rmu_sc0000007.1_g000002 Rmu_sc0000054.1_g000015 Rmu_sc0000054.1_g000023 Rmu_sc0000145.1_g000010 Rmu_sc0000166.1_g000006 Rmu_sc0000218.1_g000012 Rmu_sc0000339.1_g000008 Rmu_sc0000342.1_g000015 Rmu_sc0000464.1_g000008 Rmu_sc0000620.1_g000003 Rmu_sc0000638.1_g000017 Rmu_sc0000890.1_g000007 Rmu_sc0000894.1_g000024 Rmu_sc0000909.1_g000010 Rmu_sc0000928.1_g000020 Rmu_sc0000977.1_g000007 Rmu_sc0001022.1_g000003 Rmu_sc0001035.1_g000037 Rmu_sc0001060.1_g000008 Rmu_sc0001168.1_g000005 Rmu_sc0001173.1_g000022 Rmu_sc0001179.1_g000016 Rmu_sc0001408.1_g000003 Rmu_sc0001455.1_g000005 Rmu_sc0001484.1_g000008 Rmu_sc0001585.1_g000010 Rmu_sc0001702.1_g000030 Rmu_sc0001755.1_g000063 Rmu_sc0001903.1_g000009 Rmu_sc0002099.1_g000001 Rmu_sc0002142.1_g000012 Rmu_sc0002158.1_g000014 Rmu_sc0002307.1_g000009 Rmu_sc0002358.1_g000013 Rmu_sc0002421.1_g000002 Rmu_sc0002426.1_g000003 Rmu_sc0002438.1_g000001 Rmu_sc0002461.1_g000001 Rmu_sc0002508.1_g000003 Rmu_sc0002532.1_g000056 Rmu_sc0002583.1_g000002 Rmu_sc0002927.1_g000033 Rmu_sc0003033.1_g000040 Rmu_sc0003271.1_g000006 Rmu_sc0003381.1_g000006 Rmu_sc0003507.1_g000007 Rmu_sc0003578.1_g000003 Rmu_sc0003693.1_g000004 Rmu_sc0003693.1_g000005 Rmu_sc0003704.1_g000003 Rmu_sc0003840.1_g000002 Rmu_sc0004084.1_g000026 Rmu_sc0004193.1_g000007 Rmu_sc0004234.1_g000033 Rmu_sc0004235.1_g000025 Rmu_sc0004435.1_g000006 Rmu_sc0004727.1_g000003 Rmu_sc0004741.1_g000001 Rmu_sc0004926.1_g000004 Rmu_sc0005365.1_g000001 Rmu_sc0005392.1_g000007 Rmu_sc0005415.1_g000001 Rmu_sc0005539.1_g000007 Rmu_sc0005708.1_g000017 Rmu_sc0006317.1_g000007 Rmu_sc0006453.1_g000054 Rmu_sc0006536.1_g000004 Rmu_sc0006740.1_g000022 Rmu_sc0006763.1_g000012 Rmu_sc0007115.1_g000002 Rmu_sc0007115.1_g000010 Rmu_sc0007129.1_g000017 Rmu_sc0007131.1_g000010 Rmu_sc0008373.1_g000008 Rmu_sc0009005.1_g000008 Rmu_sc0009252.1_g000007 Rmu_sc0009599.1_g000022 Rmu_sc0009785.1_g000027 Rmu_sc0009891.1_g000003 Rmu_sc0010099.1_g000010 Rmu_sc0010266.1_g000008 Rmu_sc0010334.1_g000003 Rmu_sc0010381.1_g000001 Rmu_sc0010496.1_g000003 Rmu_sc0010496.1_g000004 Rmu_sc0010546.1_g000003 Rmu_sc0011482.1_g000006 Rmu_sc0011875.1_g000010 Rmu_sc0011917.1_g000006 Rmu_sc0012293.1_g000004 Rmu_sc0012847.1_g000003 Rmu_sc0013773.1_g000001 Rmu_sc0016060.1_g000003 Rmu_sc0016170.1_g000013 Rmu_sc0016393.1_g000002 Rmu_sc0017589.1_g000001 Rmu_sc0017786.1_g000005 Rmu_sc0018326.1_g000002 Rmu_sc0020760.1_g000001 Rmu_sc0021262.1_g000003 Rmu_sc0023851.1_g000002 Rmu_sc0024044.1_g000001 Rmu_sc0026820.1_g000001 Rmu_sc0032306.1_g000001 Rmu_sc0035666.1_g000001 Rmu_sc0036881.1_g000001 Rmu_sc0037030.1_g000001 Rmu_sc0037158.1_g000001 Rmu_ssc0000016.1_g000002 Rmu_ssc0000044.1_g000012 Rmu_ssc0000044.1_g000014 Rmu_ssc0000050.1_g000064 Rmu_ssc0000064.1_g000022 Rmu_ssc0000154.1_g000037 Rmu_ssc0000178.1_g000013 Rmu_ssc0000217.1_g000022 Rmu_ssc0000392.1_g000004
rosa_roxburghii Rroxscaffold_3G00242000 Rroxscaffold_3G00242530 Rroxscaffold_6G00406010
rosa_rugosa Rorug01G0062000 Rorug02G0224000 Rorug02G0262900 Rorug02G0263000 Rorug02G0358900 Rorug02G0360500 Rorug02G0378500.1 Rorug02G0378600 Rorug02G0394700 Rorug03G0122900 Rorug03G0254600 Rorug03G0254700 Rorug03G0254800 Rorug04G0042200.1 Rorug04G0378100 Rorug05G0053400 Rorug05G0238600 Rorug05G0364500 Rorug05G0562000 Rorug06G0089300 Rorug06G0089400 Rorug06G0145700 Rorug07G0111600 Rorug07G0229500.1 Rorug07G0287600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 202
Acc36I ACCTGC 1 cut(s) 202
AccB1I GGYRCC 1 cut(s) 287
AccB7I CCANNNNNTGG 1 cut(s) 728
AccII CGCG 1 cut(s) 311
AccIII TCCGGA 2 cut(s) 501, 659
AciI CCGC 8 cut(s) 141, 224, 283, 442, 547, 569, 812, 899
AclWI GGATC 4 cut(s) 251, 264, 433, 719
AcuI CTGAAG 3 cut(s) 75, 377, 785
AdeI CACNNNGTG 1 cut(s) 696
AfaI GTAC 1 cut(s) 554
AfiI CCNNNNNNNGG 7 cut(s) 89, 297, 370, 508, 659, 728, 955
AflIII ACRYGT 3 cut(s) 309, 424, 640
AgsI TTSAA 4 cut(s) 154, 526, 544, 754
AjnI CCWGG 2 cut(s) 727, 942
AjuI GAANNNNNNNTTGG 2 cut(s) 878, 910
AleI CACNNNNGTG 1 cut(s) 641
AluBI AGCT 4 cut(s) 133, 326, 604, 937
AluI AGCT 4 cut(s) 133, 326, 604, 937
Alw26I GTCTC 3 cut(s) 846, 956, 1086
AlwI GGATC 4 cut(s) 251, 264, 433, 719
AlwNI CAGNNNCTG 2 cut(s) 670, 728
Aor13HI TCCGGA 2 cut(s) 501, 659
AoxI GGCC 1 cut(s) 940
ApeKI GCWGC 2 cut(s) 23, 1039
ArsI GACNNNNNNTTYG 2 cut(s) 590, 622
AspLEI GCGC 1 cut(s) 670
AspS9I GGNCC 2 cut(s) 731, 946
AsuHPI GGTGA 2 cut(s) 130, 1070
AvaII GGWCC 2 cut(s) 731, 946
BaeGI GKGCMC 2 cut(s) 292, 363
BamHI GGATCC 1 cut(s) 256
BanI GGYRCC 1 cut(s) 287
BbsI GAAGAC 2 cut(s) 494, 684
BbvI GCAGC 2 cut(s) 10, 1051
BccI CCATC 1 cut(s) 329
BciT130I CCWGG 2 cut(s) 729, 944
BcoDI GTCTC 3 cut(s) 846, 956, 1086
BfaI CTAG 5 cut(s) 27, 32, 323, 365, 1029
BfmI CTRYAG 1 cut(s) 190
BfoI RGCGCY 1 cut(s) 671
BfuAI ACCTGC 1 cut(s) 202
BisI GCNGC 2 cut(s) 24, 1040
BlsI GCNGC 2 cut(s) 25, 1041
Bme1390I CCNGG 2 cut(s) 729, 944
Bme18I GGWCC 2 cut(s) 731, 946
BmgT120I GGNCC 2 cut(s) 731, 946
BmiI GGNNCC 4 cut(s) 258, 289, 744, 948
BmrFI CCNGG 2 cut(s) 729, 944
BmrI ACTGGG 1 cut(s) 501
BmsI GCATC 4 cut(s) 4, 383, 556, 605
BmuI ACTGGG 1 cut(s) 501
BpiI GAAGAC 2 cut(s) 494, 684
BpmI CTGGAG 2 cut(s) 705, 804
BsaJI CCNNGG 1 cut(s) 369
BsaWI WCCGGW 2 cut(s) 501, 659
Bsc4I CCNNNNNNNGG 7 cut(s) 89, 297, 370, 508, 659, 728, 955
Bse118I RCCGGY 1 cut(s) 346
Bse1I ACTGG 2 cut(s) 496, 838
Bse3DI GCAATG 2 cut(s) 24, 533
BseAI TCCGGA 2 cut(s) 501, 659
BseBI CCWGG 2 cut(s) 729, 944
BseDI CCNNGG 1 cut(s) 369
BseGI GGATG 1 cut(s) 679
BseLI CCNNNNNNNGG 7 cut(s) 89, 297, 370, 508, 659, 728, 955
BseMI GCAATG 2 cut(s) 24, 533
BseNI ACTGG 2 cut(s) 496, 838
BseRI GAGGAG 3 cut(s) 28, 125, 974
BseSI GKGCMC 2 cut(s) 292, 363
BseXI GCAGC 2 cut(s) 10, 1051
BseYI CCCAGC 1 cut(s) 451
Bsh1236I CGCG 1 cut(s) 311
Bsh1285I CGRYCG 1 cut(s) 573
BshFI GGCC 1 cut(s) 942
BshNI GGYRCC 1 cut(s) 287
BsiEI CGRYCG 1 cut(s) 573
BsiSI CCGG 3 cut(s) 347, 502, 660
BslFI GGGAC 1 cut(s) 820
BslI CCNNNNNNNGG 7 cut(s) 89, 297, 370, 508, 659, 728, 955
BsmAI GTCTC 3 cut(s) 846, 956, 1086
BsmBI CGTCTC 1 cut(s) 846
BsmFI GGGAC 1 cut(s) 820
BsmI GAATGC 2 cut(s) 484, 760
BsnI GGCC 1 cut(s) 942
Bsp1286I GDGCHC 2 cut(s) 292, 363
Bsp13I TCCGGA 2 cut(s) 501, 659
Bsp143I GATC 4 cut(s) 256, 265, 438, 724
Bsp19I CCATGG 1 cut(s) 369
BspACI CCGC 8 cut(s) 141, 224, 283, 442, 547, 569, 812, 899
BspANI GGCC 1 cut(s) 942
BspEI TCCGGA 2 cut(s) 501, 659
BspFNI CGCG 1 cut(s) 311
BspHI TCATGA 1 cut(s) 429
BspLI GGNNCC 4 cut(s) 258, 289, 744, 948
BspMI ACCTGC 1 cut(s) 202
BspPI GGATC 4 cut(s) 251, 264, 433, 719
BspT107I GGYRCC 1 cut(s) 287
BsrDI GCAATG 2 cut(s) 24, 533
BsrFI RCCGGY 1 cut(s) 346
BsrI ACTGG 2 cut(s) 496, 838
BssAI RCCGGY 1 cut(s) 346
BssECI CCNNGG 1 cut(s) 369
BssMI GATC 4 cut(s) 256, 265, 438, 724
BssT1I CCWWGG 1 cut(s) 369
Bst2UI CCWGG 2 cut(s) 729, 944
Bst4CI ACNGT 2 cut(s) 511, 705
Bst6I CTCTTC 1 cut(s) 396
BstAPI GCANNNNNTGC 1 cut(s) 23
BstC8I GCNNGC 3 cut(s) 131, 839, 1037
BstDEI CTNAG 2 cut(s) 483, 876
BstDSI CCRYGG 1 cut(s) 369
BstENI CCTNNNNNAGG 1 cut(s) 87
BstF5I GGATG 1 cut(s) 679
BstFNI CGCG 1 cut(s) 311
BstH2I RGCGCY 1 cut(s) 671
BstHHI GCGC 1 cut(s) 670
BstKTI GATC 4 cut(s) 259, 268, 441, 727
BstMAI GTCTC 3 cut(s) 846, 956, 1086
BstMBI GATC 4 cut(s) 256, 265, 438, 724
BstMCI CGRYCG 1 cut(s) 573
BstMWI GCNNNNNNNGC 5 cut(s) 23, 32, 85, 317, 544
BstNI CCWGG 2 cut(s) 729, 944
BstNSI RCATGY 1 cut(s) 644
BstSCI CCNGG 2 cut(s) 727, 942
BstSFI CTRYAG 1 cut(s) 190
BstSLI GKGCMC 2 cut(s) 292, 363
BstUI CGCG 1 cut(s) 311
BstV1I GCAGC 2 cut(s) 10, 1051
BstV2I GAAGAC 2 cut(s) 494, 684
BstX2I RGATCY 2 cut(s) 256, 724
BstYI RGATCY 2 cut(s) 256, 724
BsuRI GGCC 1 cut(s) 942
BtgI CCRYGG 1 cut(s) 369
BtsCI GGATG 1 cut(s) 679
BtsIMutI CAGTG 1 cut(s) 831
BveI ACCTGC 1 cut(s) 202
Cac8I GCNNGC 3 cut(s) 131, 839, 1037
CaiI CAGNNNCTG 2 cut(s) 670, 728
CciI TCATGA 1 cut(s) 429
CfoI GCGC 1 cut(s) 670
Cfr10I RCCGGY 1 cut(s) 346
Cfr13I GGNCC 2 cut(s) 731, 946
CseI GACGC 2 cut(s) 300, 830
Csp6I GTAC 1 cut(s) 553
CviAII CATG 9 cut(s) 169, 343, 370, 430, 436, 641, 654, 747, 1055
CviQI GTAC 1 cut(s) 553
DdeI CTNAG 2 cut(s) 483, 876
DpnI GATC 4 cut(s) 258, 267, 440, 726
DpnII GATC 4 cut(s) 256, 265, 438, 724
DraIII CACNNNGTG 1 cut(s) 696
Eam1104I CTCTTC 1 cut(s) 396
EarI CTCTTC 1 cut(s) 396
Eco130I CCWWGG 1 cut(s) 369
Eco47I GGWCC 2 cut(s) 731, 946
Eco57I CTGAAG 3 cut(s) 75, 377, 785
EcoNI CCTNNNNNAGG 1 cut(s) 87
EcoRII CCWGG 2 cut(s) 727, 942
EcoT14I CCWWGG 1 cut(s) 369
ErhI CCWWGG 1 cut(s) 369
Esp3I CGTCTC 1 cut(s) 846
FaeI CATG 9 cut(s) 172, 346, 373, 433, 439, 644, 657, 750, 1058
FaqI GGGAC 1 cut(s) 820
FatI CATG 9 cut(s) 168, 342, 369, 429, 435, 640, 653, 746, 1054
FauI CCCGC 1 cut(s) 276
Fnu4HI GCNGC 2 cut(s) 24, 1040
FokI GGATG 1 cut(s) 686
Fsp4HI GCNGC 2 cut(s) 24, 1040
FspBI CTAG 5 cut(s) 27, 32, 323, 365, 1029
GlaI GCGC 1 cut(s) 669
GluI GCNGC 2 cut(s) 24, 1040
GsaI CCCAGC 1 cut(s) 455
GsuI CTGGAG 2 cut(s) 705, 804
HaeII RGCGCY 1 cut(s) 671
HaeIII GGCC 1 cut(s) 942
HapII CCGG 3 cut(s) 347, 502, 660
HgaI GACGC 2 cut(s) 300, 830
HhaI GCGC 1 cut(s) 670
Hin1II CATG 9 cut(s) 172, 346, 373, 433, 439, 644, 657, 750, 1058
Hin6I GCGC 1 cut(s) 668
HinP1I GCGC 1 cut(s) 668
HindIII AAGCTT 2 cut(s) 602, 935
HinfI GANTC 3 cut(s) 718, 926, 964
HpaII CCGG 3 cut(s) 347, 502, 660
HphI GGTGA 2 cut(s) 130, 1070
Hpy166II GTNNAC 3 cut(s) 101, 701, 797
Hpy188I TCNGA 8 cut(s) 256, 265, 276, 421, 611, 717, 735, 931
Hpy188III TCNNGA 7 cut(s) 430, 464, 502, 660, 722, 821, 923
Hpy8I GTNNAC 3 cut(s) 101, 701, 797
Hpy99I CGWCG 2 cut(s) 846, 1027
HpyAV CCTTC 3 cut(s) 50, 221, 1123
HpyCH4III ACNGT 2 cut(s) 511, 705
HpyCH4IV ACGT 3 cut(s) 114, 424, 826
HpyCH4V TGCA 3 cut(s) 17, 211, 629
HpyF10VI GCNNNNNNNGC 5 cut(s) 23, 32, 85, 317, 544
HpyF3I CTNAG 2 cut(s) 483, 876
HpySE526I ACGT 3 cut(s) 114, 424, 826
Hsp92II CATG 9 cut(s) 172, 346, 373, 433, 439, 644, 657, 750, 1058
HspAI GCGC 1 cut(s) 668
Kpn2I TCCGGA 2 cut(s) 501, 659
Kzo9I GATC 4 cut(s) 256, 265, 438, 724
LmnI GCTCC 2 cut(s) 138, 662
Lsp1109I GCAGC 2 cut(s) 10, 1051
LweI GCATC 4 cut(s) 4, 383, 556, 605
MaeI CTAG 5 cut(s) 27, 32, 323, 365, 1029
MaeII ACGT 3 cut(s) 114, 424, 826
MaeIII GTNAC 1 cut(s) 634
MalI GATC 4 cut(s) 258, 267, 440, 726
MboI GATC 4 cut(s) 256, 265, 438, 724
MboII GAAGA 6 cut(s) 383, 499, 575, 624, 689, 1084
MflI RGATCY 2 cut(s) 256, 724
MhlI GDGCHC 2 cut(s) 292, 363
MluCI AATT 3 cut(s) 468, 587, 887
MluI ACGCGT 1 cut(s) 309
MlyI GAGTC 2 cut(s) 712, 958
MmeI TCCRAC 3 cut(s) 234, 1109, 1140
MnlI CCTC 9 cut(s) 46, 49, 57, 146, 211, 952, 986, 1054, 1057
MroI TCCGGA 2 cut(s) 501, 659
MslI CAYNNNNRTG 3 cut(s) 347, 434, 641
MspA1I CMGCKG 1 cut(s) 812
MspI CCGG 3 cut(s) 347, 502, 660
MspR9I CCNGG 2 cut(s) 729, 944
Mva1269I GAATGC 2 cut(s) 484, 760
MvaI CCWGG 2 cut(s) 729, 944
MvnI CGCG 1 cut(s) 311
MwoI GCNNNNNNNGC 5 cut(s) 23, 32, 85, 317, 544
NcoI CCATGG 1 cut(s) 369
NdeII GATC 4 cut(s) 256, 265, 438, 724
NlaIII CATG 9 cut(s) 172, 346, 373, 433, 439, 644, 657, 750, 1058
NlaIV GGNNCC 4 cut(s) 258, 289, 744, 948
NmuCI GTSAC 1 cut(s) 634
NspI RCATGY 1 cut(s) 644
OliI CACNNNNGTG 1 cut(s) 641
PagI TCATGA 1 cut(s) 429
PaqCI CACCTGC 1 cut(s) 202
PciI ACATGT 1 cut(s) 640
PcsI WCGNNNNNNNCGW 1 cut(s) 421
PctI GAATGC 2 cut(s) 484, 760
PfeI GAWTC 1 cut(s) 926
PflMI CCANNNNNTGG 1 cut(s) 728
PkrI GCNGC 2 cut(s) 25, 1041
PleI GAGTC 2 cut(s) 712, 958
PpsI GAGTC 2 cut(s) 712, 958
PscI ACATGT 1 cut(s) 640
Psp6I CCWGG 2 cut(s) 727, 942
PspFI CCCAGC 1 cut(s) 451
PspGI CCWGG 2 cut(s) 727, 942
PspN4I GGNNCC 4 cut(s) 258, 289, 744, 948
PspPI GGNCC 2 cut(s) 731, 946
PstNI CAGNNNCTG 2 cut(s) 670, 728
PsuI RGATCY 2 cut(s) 256, 724
RsaI GTAC 1 cut(s) 554
RsaNI GTAC 1 cut(s) 553
RseI CAYNNNNRTG 3 cut(s) 347, 434, 641
SatI GCNGC 2 cut(s) 24, 1040
Sau3AI GATC 4 cut(s) 256, 265, 438, 724
Sau96I GGNCC 2 cut(s) 731, 946
SchI GAGTC 2 cut(s) 712, 958
ScrFI CCNGG 2 cut(s) 729, 944
SduI GDGCHC 2 cut(s) 292, 363
SfaNI GCATC 4 cut(s) 4, 383, 556, 605
SfcI CTRYAG 1 cut(s) 190
SinI GGWCC 2 cut(s) 731, 946
SmiMI CAYNNNNRTG 3 cut(s) 347, 434, 641
Sse9I AATT 3 cut(s) 468, 587, 887
SsiI CCGC 8 cut(s) 141, 224, 283, 442, 547, 569, 812, 899
SspMI CTAG 5 cut(s) 27, 32, 323, 365, 1029
StyD4I CCNGG 2 cut(s) 727, 942
StyI CCWWGG 1 cut(s) 369
TaaI ACNGT 2 cut(s) 511, 705
TaiI ACGT 3 cut(s) 117, 427, 829
TaqI TCGA 3 cut(s) 268, 573, 844
TaqII GACCGA 1 cut(s) 405
TasI AATT 3 cut(s) 468, 587, 887
TfiI GAWTC 1 cut(s) 926
TscAI CASTG 1 cut(s) 838
TseFI GTSAC 1 cut(s) 634
TseI GCWGC 2 cut(s) 23, 1039
Tsp45I GTSAC 1 cut(s) 634
TspDTI ATGAA 4 cut(s) 157, 690, 995, 1106
TspGWI ACGGA 2 cut(s) 249, 581
TspRI CASTG 1 cut(s) 838
Van91I CCANNNNNTGG 1 cut(s) 728
VpaK11BI GGWCC 2 cut(s) 731, 946
XagI CCTNNNNNAGG 1 cut(s) 87
XceI RCATGY 1 cut(s) 644
XspI CTAG 5 cut(s) 27, 32, 323, 365, 1029
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.