Rmu_sc0000339.1_g000008

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000339.1
OG0000187
Physical Location & Seq
Forward (+)
41500 .. 42786
1287 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000339.1_g000008.1.cds

Sequence Viewer

Length: 1287 bp
atgtcttctgttgatgcaatggctgctagactagcctcctctcttgctatcgctgaaggcaagaggcagattgatttgcgacctaagcagggtaagggtttgcgacaggcaaacgtattcttggtgggcaagctcctcaccgctcgggatttcaaggtccagtccttcatggggatgtttcgcaacgcctggagggttaatggttcgttgcaggtggaggaagcagaaggacagagagtgctattcacactgtcggatccgtctgatcgagttcgaatatggcggggtgccccatggggatataaccacgcatcggtggctctagctttgtatgatggtatcatgccggtggagaaagtgcccctagccatggcatcatattggataactcttctgggaataccaccagcgtttcgatctgaacgtgtcatgactatgatcggctacacgctgggggattttcaggagattgataagactgctaagaagactgggaaactccggattagggttgagatacctttgcataaaccattgcctttcaagcggtggtacttggtggaagatgcggtcgagtttcgctgccaattccattatgacaagcttttcggaagatgctctgtatgtggattagtcacgcacgtgggtctgccatgctccggaccggcgttggatgaagacgatgatgaagccgagagaattgttttgggatcccagaacacggtgtcggagaggagtggtaggggctcgccgggagttttggcggggtcaacatcggggcatgctagtggtagtgggcccaatactggtgtaagagctagggttaccaccccgtgtccaccattgatatttcggactccagatcctggtccaagtggggaaccatgtttgaatgttttgtttccaaagcagaagcgacatgttgtggtacgcgaactccgggggacagcggacactccagaacgcatcactggcaagcgtcgagccagagaagaaagcctgactatctctcctaagaagctgaaattgagcttggcggtaggtaagagaaatctcactcttgattctgaaaatctgggattggaccctatacaggaggcgactcattctaggagtatgaagcggaagagaggacgaccttctggtagtagaaataaggcgtcgtctgatggcaagcagcagacctcaaatcagggtgagggtaaggcgaagaataagtccccaacgaagaagcaatctgtggggaaacactccaacccgaaagggacggagttggctcttttttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

428

Amino Acids

46.96

Weight (kDa)

10.03

Isoelectric Point (pI)

44.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000187)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20170 FvH4_4g06831
rosa_chinensis RchiOBHm_Chr1g0321991 RchiOBHm_Chr2g0161811
rosa_laevigata RLG00000015375 RLG00000018377
rosa_multiflora Rmu_co8011754.1_g000001 Rmu_co8019986.1_g000001 Rmu_co8067766.1_g000001 Rmu_co8156128.1_g000001 Rmu_co8219154.1_g000003 Rmu_co8297235.1_g000001 Rmu_co8345223.1_g000001 Rmu_co8364775.1_g000001 Rmu_co8465075.1_g000001 Rmu_sc0000007.1_g000002 Rmu_sc0000054.1_g000015 Rmu_sc0000054.1_g000023 Rmu_sc0000145.1_g000010 Rmu_sc0000166.1_g000006 Rmu_sc0000218.1_g000012 Rmu_sc0000339.1_g000008 Rmu_sc0000342.1_g000015 Rmu_sc0000464.1_g000008 Rmu_sc0000620.1_g000003 Rmu_sc0000638.1_g000017 Rmu_sc0000890.1_g000007 Rmu_sc0000894.1_g000024 Rmu_sc0000909.1_g000010 Rmu_sc0000928.1_g000020 Rmu_sc0000977.1_g000007 Rmu_sc0001022.1_g000003 Rmu_sc0001035.1_g000037 Rmu_sc0001060.1_g000008 Rmu_sc0001168.1_g000005 Rmu_sc0001173.1_g000022 Rmu_sc0001179.1_g000016 Rmu_sc0001408.1_g000003 Rmu_sc0001455.1_g000005 Rmu_sc0001484.1_g000008 Rmu_sc0001585.1_g000010 Rmu_sc0001702.1_g000030 Rmu_sc0001755.1_g000063 Rmu_sc0001903.1_g000009 Rmu_sc0002099.1_g000001 Rmu_sc0002142.1_g000012 Rmu_sc0002158.1_g000014 Rmu_sc0002307.1_g000009 Rmu_sc0002358.1_g000013 Rmu_sc0002421.1_g000002 Rmu_sc0002426.1_g000003 Rmu_sc0002438.1_g000001 Rmu_sc0002461.1_g000001 Rmu_sc0002508.1_g000003 Rmu_sc0002532.1_g000056 Rmu_sc0002583.1_g000002 Rmu_sc0002927.1_g000033 Rmu_sc0003033.1_g000040 Rmu_sc0003271.1_g000006 Rmu_sc0003381.1_g000006 Rmu_sc0003507.1_g000007 Rmu_sc0003578.1_g000003 Rmu_sc0003693.1_g000004 Rmu_sc0003693.1_g000005 Rmu_sc0003704.1_g000003 Rmu_sc0003840.1_g000002 Rmu_sc0004084.1_g000026 Rmu_sc0004193.1_g000007 Rmu_sc0004234.1_g000033 Rmu_sc0004235.1_g000025 Rmu_sc0004435.1_g000006 Rmu_sc0004727.1_g000003 Rmu_sc0004741.1_g000001 Rmu_sc0004926.1_g000004 Rmu_sc0005365.1_g000001 Rmu_sc0005392.1_g000007 Rmu_sc0005415.1_g000001 Rmu_sc0005539.1_g000007 Rmu_sc0005708.1_g000017 Rmu_sc0006317.1_g000007 Rmu_sc0006453.1_g000054 Rmu_sc0006536.1_g000004 Rmu_sc0006740.1_g000022 Rmu_sc0006763.1_g000012 Rmu_sc0007115.1_g000002 Rmu_sc0007115.1_g000010 Rmu_sc0007129.1_g000017 Rmu_sc0007131.1_g000010 Rmu_sc0008373.1_g000008 Rmu_sc0009005.1_g000008 Rmu_sc0009252.1_g000007 Rmu_sc0009599.1_g000022 Rmu_sc0009785.1_g000027 Rmu_sc0009891.1_g000003 Rmu_sc0010099.1_g000010 Rmu_sc0010266.1_g000008 Rmu_sc0010334.1_g000003 Rmu_sc0010381.1_g000001 Rmu_sc0010496.1_g000003 Rmu_sc0010496.1_g000004 Rmu_sc0010546.1_g000003 Rmu_sc0011482.1_g000006 Rmu_sc0011875.1_g000010 Rmu_sc0011917.1_g000006 Rmu_sc0012293.1_g000004 Rmu_sc0012847.1_g000003 Rmu_sc0013773.1_g000001 Rmu_sc0016060.1_g000003 Rmu_sc0016170.1_g000013 Rmu_sc0016393.1_g000002 Rmu_sc0017589.1_g000001 Rmu_sc0017786.1_g000005 Rmu_sc0018326.1_g000002 Rmu_sc0020760.1_g000001 Rmu_sc0021262.1_g000003 Rmu_sc0023851.1_g000002 Rmu_sc0024044.1_g000001 Rmu_sc0026820.1_g000001 Rmu_sc0032306.1_g000001 Rmu_sc0035666.1_g000001 Rmu_sc0036881.1_g000001 Rmu_sc0037030.1_g000001 Rmu_sc0037158.1_g000001 Rmu_ssc0000016.1_g000002 Rmu_ssc0000044.1_g000012 Rmu_ssc0000044.1_g000014 Rmu_ssc0000050.1_g000064 Rmu_ssc0000064.1_g000022 Rmu_ssc0000154.1_g000037 Rmu_ssc0000178.1_g000013 Rmu_ssc0000217.1_g000022 Rmu_ssc0000392.1_g000004
rosa_roxburghii Rroxscaffold_3G00242000 Rroxscaffold_3G00242530 Rroxscaffold_6G00406010
rosa_rugosa Rorug01G0062000 Rorug02G0224000 Rorug02G0262900 Rorug02G0263000 Rorug02G0358900 Rorug02G0360500 Rorug02G0378500.1 Rorug02G0378600 Rorug02G0394700 Rorug03G0122900 Rorug03G0254600 Rorug03G0254700 Rorug03G0254800 Rorug04G0042200.1 Rorug04G0378100 Rorug05G0053400 Rorug05G0238600 Rorug05G0364500 Rorug05G0562000 Rorug06G0089300 Rorug06G0089400 Rorug06G0145700 Rorug07G0111600 Rorug07G0229500.1 Rorug07G0287600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 202
Acc36I ACCTGC 1 cut(s) 202
AccB1I GGYRCC 1 cut(s) 287
AccB7I CCANNNNNTGG 1 cut(s) 866
AccBSI CCGCTC 1 cut(s) 143
AccII CGCG 1 cut(s) 933
AccIII TCCGGA 2 cut(s) 501, 659
AciI CCGC 8 cut(s) 141, 283, 547, 569, 764, 950, 1037, 1123
AclWI GGATC 5 cut(s) 251, 264, 705, 718, 857
AcuI CTGAAG 1 cut(s) 75
AcvI CACGTG 1 cut(s) 643
AcyI GRCGYC 1 cut(s) 1160
AdeI CACNNNGTG 1 cut(s) 834
AfaI GTAC 2 cut(s) 554, 930
AflIII ACRYGT 2 cut(s) 424, 919
AgsI TTSAA 3 cut(s) 154, 544, 892
AjnI CCWGG 2 cut(s) 188, 865
AjuI GAANNNNNNNTTGG 2 cut(s) 1016, 1048
AleI CACNNNNGTG 1 cut(s) 641
AluBI AGCT 6 cut(s) 133, 326, 604, 818, 1021, 1032
AluI AGCT 6 cut(s) 133, 326, 604, 818, 1021, 1032
AlwI GGATC 5 cut(s) 251, 264, 705, 718, 857
AlwNI CAGNNNCTG 1 cut(s) 866
Ama87I CYCGRG 1 cut(s) 144
Aor13HI TCCGGA 2 cut(s) 501, 659
AoxI GGCC 1 cut(s) 797
ApaI GGGCCC 1 cut(s) 801
ApeKI GCWGC 3 cut(s) 23, 582, 1177
ArsI GACNNNNNNTTYG 4 cut(s) 590, 622, 1202, 1234
AspS9I GGNCC 6 cut(s) 157, 662, 797, 798, 869, 1084
AsuC2I CCSGG 2 cut(s) 753, 941
AsuHPI GGTGA 2 cut(s) 130, 1208
AsuII TTCGAA 1 cut(s) 274
AvaI CYCGRG 1 cut(s) 144
AvaII GGWCC 4 cut(s) 157, 662, 869, 1084
BaeGI GKGCMC 3 cut(s) 292, 363, 801
BamHI GGATCC 2 cut(s) 256, 710
BanI GGYRCC 1 cut(s) 287
BanII GRGCYC 2 cut(s) 749, 801
BbrPI CACGTG 1 cut(s) 643
BbsI GAAGAC 2 cut(s) 494, 684
BbvI GCAGC 3 cut(s) 10, 569, 1189
BccI CCATC 2 cut(s) 329, 1163
BciT130I CCWGG 2 cut(s) 190, 867
BcnI CCSGG 2 cut(s) 753, 941
BfaI CTAG 7 cut(s) 27, 32, 323, 365, 786, 819, 1110
BfuAI ACCTGC 1 cut(s) 202
BisI GCNGC 3 cut(s) 24, 583, 1178
BlsI GCNGC 3 cut(s) 25, 584, 1179
Bme1390I CCNGG 4 cut(s) 190, 753, 867, 941
Bme18I GGWCC 4 cut(s) 157, 662, 869, 1084
BmeT110I CYCGRG 1 cut(s) 144
BmgT120I GGNCC 6 cut(s) 157, 662, 797, 798, 869, 1084
BmiI GGNNCC 6 cut(s) 258, 289, 712, 799, 882, 1086
BmrFI CCNGG 4 cut(s) 190, 753, 867, 941
BmrI ACTGGG 1 cut(s) 501
BmsI GCATC 6 cut(s) 4, 320, 383, 556, 605, 975
BmuI ACTGGG 1 cut(s) 501
BpiI GAAGAC 2 cut(s) 494, 684
BpmI CTGGAG 3 cut(s) 211, 843, 942
Bpu10I CCTNAGC 1 cut(s) 84
Bpu14I TTCGAA 1 cut(s) 274
BpuMI CCSGG 2 cut(s) 753, 941
BsaAI YACGTR 1 cut(s) 643
BsaHI GRCGYC 1 cut(s) 1160
BsaJI CCNNGG 3 cut(s) 293, 369, 940
BsaWI WCCGGW 2 cut(s) 501, 659
BsaXI ACNNNNNCTCC 4 cut(s) 921, 951, 994, 1024
Bse118I RCCGGY 2 cut(s) 346, 664
Bse1I ACTGG 4 cut(s) 160, 496, 811, 976
Bse3DI GCAATG 2 cut(s) 24, 533
BseAI TCCGGA 2 cut(s) 501, 659
BseBI CCWGG 2 cut(s) 190, 867
BseDI CCNNGG 3 cut(s) 293, 369, 940
BseGI GGATG 2 cut(s) 180, 679
BseMI GCAATG 2 cut(s) 24, 533
BseNI ACTGG 4 cut(s) 160, 496, 811, 976
BseRI GAGGAG 3 cut(s) 28, 125, 748
BseSI GKGCMC 3 cut(s) 292, 363, 801
BseXI GCAGC 3 cut(s) 10, 569, 1189
BseYI CCCAGC 1 cut(s) 451
Bsh1236I CGCG 1 cut(s) 933
Bsh1285I CGRYCG 1 cut(s) 573
BshFI GGCC 1 cut(s) 799
BshNI GGYRCC 1 cut(s) 287
BsiEI CGRYCG 1 cut(s) 573
BsiHKCI CYCGRG 1 cut(s) 144
BsiSI CCGG 6 cut(s) 347, 502, 660, 665, 752, 940
BslFI GGGAC 3 cut(s) 958, 1204, 1279
BsmFI GGGAC 3 cut(s) 958, 1204, 1279
BsnI GGCC 1 cut(s) 799
BsoBI CYCGRG 1 cut(s) 144
Bsp119I TTCGAA 1 cut(s) 274
Bsp120I GGGCCC 1 cut(s) 797
Bsp1286I GDGCHC 4 cut(s) 292, 363, 749, 801
Bsp13I TCCGGA 2 cut(s) 501, 659
Bsp143I GATC 6 cut(s) 256, 265, 416, 438, 710, 862
Bsp19I CCATGG 2 cut(s) 293, 369
BspACI CCGC 8 cut(s) 141, 283, 547, 569, 764, 950, 1037, 1123
BspANI GGCC 1 cut(s) 799
BspEI TCCGGA 2 cut(s) 501, 659
BspFNI CGCG 1 cut(s) 933
BspHI TCATGA 1 cut(s) 429
BspLI GGNNCC 6 cut(s) 258, 289, 712, 799, 882, 1086
BspMI ACCTGC 1 cut(s) 202
BspPI GGATC 5 cut(s) 251, 264, 705, 718, 857
BspT104I TTCGAA 1 cut(s) 274
BspT107I GGYRCC 1 cut(s) 287
BsrBI CCGCTC 1 cut(s) 143
BsrDI GCAATG 2 cut(s) 24, 533
BsrFI RCCGGY 2 cut(s) 346, 664
BsrI ACTGG 4 cut(s) 160, 496, 811, 976
BssAI RCCGGY 2 cut(s) 346, 664
BssECI CCNNGG 3 cut(s) 293, 369, 940
BssMI GATC 6 cut(s) 256, 265, 416, 438, 710, 862
BssNI GRCGYC 1 cut(s) 1160
BssT1I CCWWGG 2 cut(s) 293, 369
Bst2UI CCWGG 2 cut(s) 190, 867
Bst4CI ACNGT 2 cut(s) 252, 724
Bst6I CTCTTC 2 cut(s) 396, 1121
BstACI GRCGYC 1 cut(s) 1160
BstAPI GCANNNNNTGC 1 cut(s) 23
BstBAI YACGTR 1 cut(s) 643
BstBI TTCGAA 1 cut(s) 274
BstC8I GCNNGC 5 cut(s) 131, 749, 783, 977, 1175
BstDEI CTNAG 3 cut(s) 84, 483, 1014
BstDSI CCRYGG 2 cut(s) 293, 369
BstEII GGTNACC 1 cut(s) 823
BstF5I GGATG 2 cut(s) 180, 679
BstFNI CGCG 1 cut(s) 933
BstKTI GATC 6 cut(s) 259, 268, 419, 441, 713, 865
BstMBI GATC 6 cut(s) 256, 265, 416, 438, 710, 862
BstMCI CGRYCG 1 cut(s) 573
BstMWI GCNNNNNNNGC 6 cut(s) 23, 32, 85, 317, 544, 972
BstNI CCWGG 2 cut(s) 190, 867
BstNSI RCATGY 2 cut(s) 785, 923
BstPI GGTNACC 1 cut(s) 823
BstSCI CCNGG 4 cut(s) 188, 751, 865, 939
BstSLI GKGCMC 3 cut(s) 292, 363, 801
BstUI CGCG 1 cut(s) 933
BstV1I GCAGC 3 cut(s) 10, 569, 1189
BstV2I GAAGAC 2 cut(s) 494, 684
BstX2I RGATCY 3 cut(s) 256, 710, 862
BstYI RGATCY 3 cut(s) 256, 710, 862
BsuRI GGCC 1 cut(s) 799
BtgI CCRYGG 2 cut(s) 293, 369
BtsCI GGATG 2 cut(s) 180, 679
BtsIMutI CAGTG 2 cut(s) 248, 969
BveI ACCTGC 1 cut(s) 202
Cac8I GCNNGC 5 cut(s) 131, 749, 783, 977, 1175
CaiI CAGNNNCTG 1 cut(s) 866
CciI TCATGA 1 cut(s) 429
Cfr10I RCCGGY 2 cut(s) 346, 664
Cfr13I GGNCC 6 cut(s) 157, 662, 797, 798, 869, 1084
CpoI CGGWCCG 1 cut(s) 662
CseI GACGC 2 cut(s) 968, 1149
Csp6I GTAC 2 cut(s) 553, 929
CspI CGGWCCG 1 cut(s) 662
CviAII CATG 9 cut(s) 169, 294, 343, 370, 430, 654, 782, 885, 920
CviQI GTAC 2 cut(s) 553, 929
DdeI CTNAG 3 cut(s) 84, 483, 1014
DpnI GATC 6 cut(s) 258, 267, 418, 440, 712, 864
DpnII GATC 6 cut(s) 256, 265, 416, 438, 710, 862
DraIII CACNNNGTG 1 cut(s) 834
Eam1104I CTCTTC 2 cut(s) 396, 1121
EarI CTCTTC 2 cut(s) 396, 1121
Eco130I CCWWGG 2 cut(s) 293, 369
Eco24I GRGCYC 2 cut(s) 749, 801
Eco47I GGWCC 4 cut(s) 157, 662, 869, 1084
Eco57I CTGAAG 1 cut(s) 75
Eco72I CACGTG 1 cut(s) 643
Eco88I CYCGRG 1 cut(s) 144
Eco91I GGTNACC 1 cut(s) 823
EcoO65I GGTNACC 1 cut(s) 823
EcoRII CCWGG 2 cut(s) 188, 865
EcoT14I CCWWGG 2 cut(s) 293, 369
EcoT38I GRGCYC 2 cut(s) 749, 801
ErhI CCWWGG 2 cut(s) 293, 369
FaeI CATG 9 cut(s) 172, 297, 346, 373, 433, 657, 785, 888, 923
FaqI GGGAC 3 cut(s) 958, 1204, 1279
FatI CATG 9 cut(s) 168, 293, 342, 369, 429, 653, 781, 884, 919
FauI CCCGC 2 cut(s) 276, 757
Fnu4HI GCNGC 3 cut(s) 24, 583, 1178
FokI GGATG 2 cut(s) 187, 686
FriOI GRGCYC 2 cut(s) 749, 801
Fsp4HI GCNGC 3 cut(s) 24, 583, 1178
FspBI CTAG 7 cut(s) 27, 32, 323, 365, 786, 819, 1110
GluI GCNGC 3 cut(s) 24, 583, 1178
GsaI CCCAGC 1 cut(s) 455
GsuI CTGGAG 3 cut(s) 211, 843, 942
HaeIII GGCC 1 cut(s) 799
HapII CCGG 6 cut(s) 347, 502, 660, 665, 752, 940
HgaI GACGC 2 cut(s) 968, 1149
Hin1I GRCGYC 1 cut(s) 1160
Hin1II CATG 9 cut(s) 172, 297, 346, 373, 433, 657, 785, 888, 923
HincII GTYRAC 1 cut(s) 771
HindII GTYRAC 1 cut(s) 771
HindIII AAGCTT 1 cut(s) 602
HinfI GANTC 3 cut(s) 856, 1064, 1102
HpaII CCGG 6 cut(s) 347, 502, 660, 665, 752, 940
HphI GGTGA 2 cut(s) 130, 1208
Hpy166II GTNNAC 2 cut(s) 771, 839
Hpy188I TCNGA 8 cut(s) 256, 265, 421, 611, 730, 855, 1069, 1168
Hpy188III TCNNGA 8 cut(s) 146, 430, 464, 502, 660, 860, 959, 1061
Hpy8I GTNNAC 2 cut(s) 771, 839
Hpy99I CGWCG 2 cut(s) 984, 1165
HpyAV CCTTC 4 cut(s) 50, 175, 221, 1149
HpyCH4III ACNGT 2 cut(s) 252, 724
HpyCH4IV ACGT 3 cut(s) 114, 424, 642
HpyCH4V TGCA 3 cut(s) 17, 211, 526
HpyF10VI GCNNNNNNNGC 6 cut(s) 23, 32, 85, 317, 544, 972
HpyF3I CTNAG 3 cut(s) 84, 483, 1014
HpySE526I ACGT 3 cut(s) 114, 424, 642
Hsp92I GRCGYC 1 cut(s) 1160
Hsp92II CATG 9 cut(s) 172, 297, 346, 373, 433, 657, 785, 888, 923
Kpn2I TCCGGA 2 cut(s) 501, 659
Kzo9I GATC 6 cut(s) 256, 265, 416, 438, 710, 862
LmnI GCTCC 2 cut(s) 138, 662
Lsp1109I GCAGC 3 cut(s) 10, 569, 1189
LweI GCATC 6 cut(s) 4, 320, 383, 556, 605, 975
MaeI CTAG 7 cut(s) 27, 32, 323, 365, 786, 819, 1110
MaeII ACGT 3 cut(s) 114, 424, 642
MaeIII GTNAC 2 cut(s) 634, 823
MalI GATC 6 cut(s) 258, 267, 418, 440, 712, 864
MbiI CCGCTC 1 cut(s) 143
MboI GATC 6 cut(s) 256, 265, 416, 438, 710, 862
MboII GAAGA 9 cut(s) 383, 499, 575, 624, 689, 1004, 1138, 1222, 1240
MflI RGATCY 3 cut(s) 256, 710, 862
MhlI GDGCHC 4 cut(s) 292, 363, 749, 801
MluCI AATT 3 cut(s) 587, 699, 1025
MlyI GAGTC 2 cut(s) 850, 1096
MmeI TCCRAC 4 cut(s) 234, 651, 708, 1278
MroI TCCGGA 2 cut(s) 501, 659
MseI TTAA 2 cut(s) 198, 1285
MslI CAYNNNNRTG 5 cut(s) 173, 347, 434, 641, 786
MspA1I CMGCKG 1 cut(s) 950
MspI CCGG 6 cut(s) 347, 502, 660, 665, 752, 940
MspR9I CCNGG 4 cut(s) 190, 753, 867, 941
MvaI CCWGG 2 cut(s) 190, 867
MvnI CGCG 1 cut(s) 933
MwoI GCNNNNNNNGC 6 cut(s) 23, 32, 85, 317, 544, 972
NciI CCSGG 2 cut(s) 753, 941
NcoI CCATGG 2 cut(s) 293, 369
NdeII GATC 6 cut(s) 256, 265, 416, 438, 710, 862
NlaIII CATG 9 cut(s) 172, 297, 346, 373, 433, 657, 785, 888, 923
NlaIV GGNNCC 6 cut(s) 258, 289, 712, 799, 882, 1086
NmeAIII GCCGAG 1 cut(s) 718
NmuCI GTSAC 1 cut(s) 634
NspI RCATGY 2 cut(s) 785, 923
NspV TTCGAA 1 cut(s) 274
OliI CACNNNNGTG 1 cut(s) 641
PaeI GCATGC 1 cut(s) 785
PagI TCATGA 1 cut(s) 429
PaqCI CACCTGC 1 cut(s) 202
PciI ACATGT 1 cut(s) 919
PcsI WCGNNNNNNNCGW 1 cut(s) 421
PfeI GAWTC 1 cut(s) 1064
PflMI CCANNNNNTGG 1 cut(s) 866
PkrI GCNGC 3 cut(s) 25, 584, 1179
PleI GAGTC 2 cut(s) 850, 1096
PmaCI CACGTG 1 cut(s) 643
PmlI CACGTG 1 cut(s) 643
PpsI GAGTC 2 cut(s) 850, 1096
Ppu21I YACGTR 1 cut(s) 643
PscI ACATGT 1 cut(s) 919
Psp6I CCWGG 2 cut(s) 188, 865
PspCI CACGTG 1 cut(s) 643
PspEI GGTNACC 1 cut(s) 823
PspFI CCCAGC 1 cut(s) 451
PspGI CCWGG 2 cut(s) 188, 865
PspN4I GGNNCC 6 cut(s) 258, 289, 712, 799, 882, 1086
PspOMI GGGCCC 1 cut(s) 797
PspPI GGNCC 6 cut(s) 157, 662, 797, 798, 869, 1084
PstNI CAGNNNCTG 1 cut(s) 866
PsuI RGATCY 3 cut(s) 256, 710, 862
RsaI GTAC 2 cut(s) 554, 930
RsaNI GTAC 2 cut(s) 553, 929
RseI CAYNNNNRTG 5 cut(s) 173, 347, 434, 641, 786
Rsr2I CGGWCCG 1 cut(s) 662
RsrII CGGWCCG 1 cut(s) 662
SaqAI TTAA 2 cut(s) 198, 1285
SatI GCNGC 3 cut(s) 24, 583, 1178
Sau3AI GATC 6 cut(s) 256, 265, 416, 438, 710, 862
Sau96I GGNCC 6 cut(s) 157, 662, 797, 798, 869, 1084
SchI GAGTC 2 cut(s) 850, 1096
ScrFI CCNGG 4 cut(s) 190, 753, 867, 941
SduI GDGCHC 4 cut(s) 292, 363, 749, 801
SfaNI GCATC 6 cut(s) 4, 320, 383, 556, 605, 975
SfuI TTCGAA 1 cut(s) 274
SinI GGWCC 4 cut(s) 157, 662, 869, 1084
SmiMI CAYNNNNRTG 5 cut(s) 173, 347, 434, 641, 786
SphI GCATGC 1 cut(s) 785
Sse9I AATT 3 cut(s) 587, 699, 1025
SsiI CCGC 8 cut(s) 141, 283, 547, 569, 764, 950, 1037, 1123
SspMI CTAG 7 cut(s) 27, 32, 323, 365, 786, 819, 1110
StyD4I CCNGG 4 cut(s) 188, 751, 865, 939
StyI CCWWGG 2 cut(s) 293, 369
TaaI ACNGT 2 cut(s) 252, 724
TaiI ACGT 3 cut(s) 117, 427, 645
TaqI TCGA 5 cut(s) 268, 274, 415, 573, 982
TasI AATT 3 cut(s) 587, 699, 1025
TfiI GAWTC 1 cut(s) 1064
Tru1I TTAA 2 cut(s) 198, 1285
Tru9I TTAA 2 cut(s) 198, 1285
TscAI CASTG 2 cut(s) 255, 976
TseFI GTSAC 1 cut(s) 634
TseI GCWGC 3 cut(s) 23, 582, 1177
Tsp45I GTSAC 1 cut(s) 634
TspDTI ATGAA 4 cut(s) 157, 690, 702, 1133
TspGWI ACGGA 2 cut(s) 249, 1283
TspRI CASTG 2 cut(s) 255, 976
Van91I CCANNNNNTGG 1 cut(s) 866
VpaK11BI GGWCC 4 cut(s) 157, 662, 869, 1084
XceI RCATGY 2 cut(s) 785, 923
XspI CTAG 7 cut(s) 27, 32, 323, 365, 786, 819, 1110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.