ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 184 |
| Acc36I | ACCTGC | 1 cut(s) | 184 |
| AccB1I | GGYRCC | 1 cut(s) | 269 |
| AccBSI | CCGCTC | 1 cut(s) | 125 |
| AciI | CCGC | 2 cut(s) | 123, 265 |
| AclWI | GGATC | 2 cut(s) | 233, 246 |
| AcuI | CTGAAG | 2 cut(s) | 57, 359 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 71, 279 |
| AgsI | TTSAA | 1 cut(s) | 136 |
| AjnI | CCWGG | 1 cut(s) | 170 |
| AluBI | AGCT | 2 cut(s) | 115, 308 |
| AluI | AGCT | 2 cut(s) | 115, 308 |
| AlwI | GGATC | 2 cut(s) | 233, 246 |
| Ama87I | CYCGRG | 1 cut(s) | 126 |
| ApeKI | GCWGC | 2 cut(s) | 5, 190 |
| AspLEI | GCGC | 1 cut(s) | 295 |
| AspS9I | GGNCC | 1 cut(s) | 139 |
| AsuHPI | GGTGA | 1 cut(s) | 112 |
| AsuII | TTCGAA | 1 cut(s) | 256 |
| AvaI | CYCGRG | 1 cut(s) | 126 |
| AvaII | GGWCC | 1 cut(s) | 139 |
| BaeGI | GKGCMC | 2 cut(s) | 274, 345 |
| BamHI | GGATCC | 1 cut(s) | 238 |
| BanI | GGYRCC | 1 cut(s) | 269 |
| BbvI | GCAGC | 1 cut(s) | 177 |
| BccI | CCATC | 2 cut(s) | 311, 346 |
| BciT130I | CCWGG | 1 cut(s) | 172 |
| BfaI | CTAG | 2 cut(s) | 14, 305 |
| BfmI | CTRYAG | 1 cut(s) | 191 |
| BfoI | RGCGCY | 1 cut(s) | 296 |
| BfuAI | ACCTGC | 1 cut(s) | 184 |
| BisI | GCNGC | 2 cut(s) | 6, 191 |
| BlsI | GCNGC | 2 cut(s) | 7, 192 |
| Bme1390I | CCNGG | 1 cut(s) | 172 |
| Bme18I | GGWCC | 1 cut(s) | 139 |
| BmeT110I | CYCGRG | 1 cut(s) | 126 |
| BmgT120I | GGNCC | 1 cut(s) | 139 |
| BmiI | GGNNCC | 2 cut(s) | 240, 271 |
| BmrFI | CCNGG | 1 cut(s) | 172 |
| BmsI | GCATC | 1 cut(s) | 365 |
| BpmI | CTGGAG | 1 cut(s) | 193 |
| Bpu10I | CCTNAGC | 1 cut(s) | 66 |
| Bpu14I | TTCGAA | 1 cut(s) | 256 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 71, 279 |
| Bse118I | RCCGGY | 2 cut(s) | 295, 328 |
| Bse1I | ACTGG | 1 cut(s) | 142 |
| BseBI | CCWGG | 1 cut(s) | 172 |
| BseGI | GGATG | 1 cut(s) | 162 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 71, 279 |
| BseNI | ACTGG | 1 cut(s) | 142 |
| BseRI | GAGGAG | 2 cut(s) | 10, 107 |
| BseSI | GKGCMC | 2 cut(s) | 274, 345 |
| BseXI | GCAGC | 1 cut(s) | 177 |
| BshNI | GGYRCC | 1 cut(s) | 269 |
| BsiHKCI | CYCGRG | 1 cut(s) | 126 |
| BsiSI | CCGG | 2 cut(s) | 296, 329 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 71, 279 |
| BsoBI | CYCGRG | 1 cut(s) | 126 |
| Bsp119I | TTCGAA | 1 cut(s) | 256 |
| Bsp1286I | GDGCHC | 2 cut(s) | 274, 345 |
| Bsp143I | GATC | 2 cut(s) | 238, 247 |
| BspACI | CCGC | 2 cut(s) | 123, 265 |
| BspLI | GGNNCC | 2 cut(s) | 240, 271 |
| BspMAI | CTGCAG | 1 cut(s) | 195 |
| BspMI | ACCTGC | 1 cut(s) | 184 |
| BspPI | GGATC | 2 cut(s) | 233, 246 |
| BspT104I | TTCGAA | 1 cut(s) | 256 |
| BspT107I | GGYRCC | 1 cut(s) | 269 |
| BsrBI | CCGCTC | 1 cut(s) | 125 |
| BsrFI | RCCGGY | 2 cut(s) | 295, 328 |
| BsrI | ACTGG | 1 cut(s) | 142 |
| BssAI | RCCGGY | 2 cut(s) | 295, 328 |
| BssMI | GATC | 2 cut(s) | 238, 247 |
| Bst2UI | CCWGG | 1 cut(s) | 172 |
| Bst6I | CTCTTC | 1 cut(s) | 378 |
| BstBI | TTCGAA | 1 cut(s) | 256 |
| BstC8I | GCNNGC | 1 cut(s) | 113 |
| BstDEI | CTNAG | 2 cut(s) | 66, 346 |
| BstF5I | GGATG | 1 cut(s) | 162 |
| BstH2I | RGCGCY | 1 cut(s) | 296 |
| BstHHI | GCGC | 1 cut(s) | 295 |
| BstKTI | GATC | 2 cut(s) | 241, 250 |
| BstMBI | GATC | 2 cut(s) | 238, 247 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 14, 67, 299 |
| BstNI | CCWGG | 1 cut(s) | 172 |
| BstSCI | CCNGG | 1 cut(s) | 170 |
| BstSFI | CTRYAG | 1 cut(s) | 191 |
| BstSLI | GKGCMC | 2 cut(s) | 274, 345 |
| BstV1I | GCAGC | 1 cut(s) | 177 |
| BstX2I | RGATCY | 1 cut(s) | 238 |
| BstYI | RGATCY | 1 cut(s) | 238 |
| BtsCI | GGATG | 1 cut(s) | 162 |
| BveI | ACCTGC | 1 cut(s) | 184 |
| Cac8I | GCNNGC | 1 cut(s) | 113 |
| CfoI | GCGC | 1 cut(s) | 295 |
| Cfr10I | RCCGGY | 2 cut(s) | 295, 328 |
| Cfr13I | GGNCC | 1 cut(s) | 139 |
| CviAII | CATG | 2 cut(s) | 151, 325 |
| CviJI | RGCY | 5 cut(s) | 5, 17, 115, 302, 308 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 17, 115, 302, 308 |
| DdeI | CTNAG | 2 cut(s) | 66, 346 |
| DpnI | GATC | 2 cut(s) | 240, 249 |
| DpnII | GATC | 2 cut(s) | 238, 247 |
| Eam1104I | CTCTTC | 1 cut(s) | 378 |
| EarI | CTCTTC | 1 cut(s) | 378 |
| Eco47I | GGWCC | 1 cut(s) | 139 |
| Eco57I | CTGAAG | 2 cut(s) | 57, 359 |
| Eco88I | CYCGRG | 1 cut(s) | 126 |
| EcoRII | CCWGG | 1 cut(s) | 170 |
| FaeI | CATG | 2 cut(s) | 154, 328 |
| FaiI | YATR | 6 cut(s) | 152, 262, 285, 315, 326, 361 |
| FatI | CATG | 2 cut(s) | 150, 324 |
| FauI | CCCGC | 1 cut(s) | 258 |
| Fnu4HI | GCNGC | 2 cut(s) | 6, 191 |
| FokI | GGATG | 1 cut(s) | 169 |
| Fsp4HI | GCNGC | 2 cut(s) | 6, 191 |
| FspBI | CTAG | 2 cut(s) | 14, 305 |
| GlaI | GCGC | 1 cut(s) | 294 |
| GluI | GCNGC | 2 cut(s) | 6, 191 |
| GsuI | CTGGAG | 1 cut(s) | 193 |
| HaeII | RGCGCY | 1 cut(s) | 296 |
| HapII | CCGG | 2 cut(s) | 296, 329 |
| HhaI | GCGC | 1 cut(s) | 295 |
| Hin1II | CATG | 2 cut(s) | 154, 328 |
| Hin6I | GCGC | 1 cut(s) | 293 |
| HinP1I | GCGC | 1 cut(s) | 293 |
| HpaII | CCGG | 2 cut(s) | 296, 329 |
| HphI | GGTGA | 1 cut(s) | 112 |
| Hpy188I | TCNGA | 2 cut(s) | 238, 247 |
| Hpy188III | TCNNGA | 1 cut(s) | 128 |
| HpyAV | CCTTC | 2 cut(s) | 32, 203 |
| HpyCH4IV | ACGT | 1 cut(s) | 96 |
| HpyCH4V | TGCA | 1 cut(s) | 193 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 14, 67, 299 |
| HpyF3I | CTNAG | 2 cut(s) | 66, 346 |
| HpySE526I | ACGT | 1 cut(s) | 96 |
| Hsp92II | CATG | 2 cut(s) | 154, 328 |
| HspAI | GCGC | 1 cut(s) | 293 |
| Kzo9I | GATC | 2 cut(s) | 238, 247 |
| LmnI | GCTCC | 1 cut(s) | 120 |
| Lsp1109I | GCAGC | 1 cut(s) | 177 |
| LweI | GCATC | 1 cut(s) | 365 |
| MaeI | CTAG | 2 cut(s) | 14, 305 |
| MaeII | ACGT | 1 cut(s) | 96 |
| MalI | GATC | 2 cut(s) | 240, 249 |
| MbiI | CCGCTC | 1 cut(s) | 125 |
| MboI | GATC | 2 cut(s) | 238, 247 |
| MboII | GAAGA | 1 cut(s) | 365 |
| MflI | RGATCY | 1 cut(s) | 238 |
| MhlI | GDGCHC | 2 cut(s) | 274, 345 |
| MmeI | TCCRAC | 1 cut(s) | 216 |
| MnlI | CCTC | 7 cut(s) | 28, 31, 39, 128, 168, 193, 210 |
| MseI | TTAA | 1 cut(s) | 180 |
| MslI | CAYNNNNRTG | 2 cut(s) | 155, 329 |
| MspI | CCGG | 2 cut(s) | 296, 329 |
| MspR9I | CCNGG | 1 cut(s) | 172 |
| MvaI | CCWGG | 1 cut(s) | 172 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 14, 67, 299 |
| NdeII | GATC | 2 cut(s) | 238, 247 |
| NlaIII | CATG | 2 cut(s) | 154, 328 |
| NlaIV | GGNNCC | 2 cut(s) | 240, 271 |
| NspV | TTCGAA | 1 cut(s) | 256 |
| PaqCI | CACCTGC | 1 cut(s) | 184 |
| PkrI | GCNGC | 2 cut(s) | 7, 192 |
| Psp6I | CCWGG | 1 cut(s) | 170 |
| PspGI | CCWGG | 1 cut(s) | 170 |
| PspN4I | GGNNCC | 2 cut(s) | 240, 271 |
| PspPI | GGNCC | 1 cut(s) | 139 |
| PstI | CTGCAG | 1 cut(s) | 195 |
| PsuI | RGATCY | 1 cut(s) | 238 |
| RseI | CAYNNNNRTG | 2 cut(s) | 155, 329 |
| SaqAI | TTAA | 1 cut(s) | 180 |
| SatI | GCNGC | 2 cut(s) | 6, 191 |
| Sau3AI | GATC | 2 cut(s) | 238, 247 |
| Sau96I | GGNCC | 1 cut(s) | 139 |
| ScrFI | CCNGG | 1 cut(s) | 172 |
| SduI | GDGCHC | 2 cut(s) | 274, 345 |
| SetI | ASST | 6 cut(s) | 67, 99, 117, 141, 198, 310 |
| SfaNI | GCATC | 1 cut(s) | 365 |
| SfcI | CTRYAG | 1 cut(s) | 191 |
| SfuI | TTCGAA | 1 cut(s) | 256 |
| SgrAI | CRCCGGYG | 1 cut(s) | 295 |
| SinI | GGWCC | 1 cut(s) | 139 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 155, 329 |
| SsiI | CCGC | 2 cut(s) | 123, 265 |
| SspMI | CTAG | 2 cut(s) | 14, 305 |
| StyD4I | CCNGG | 1 cut(s) | 170 |
| TaiI | ACGT | 1 cut(s) | 99 |
| TaqI | TCGA | 2 cut(s) | 250, 256 |
| Tru1I | TTAA | 1 cut(s) | 180 |
| Tru9I | TTAA | 1 cut(s) | 180 |
| TseI | GCWGC | 2 cut(s) | 5, 190 |
| TspDTI | ATGAA | 1 cut(s) | 139 |
| TspGWI | ACGGA | 1 cut(s) | 231 |
| VpaK11BI | GGWCC | 1 cut(s) | 139 |
| XspI | CTAG | 2 cut(s) | 14, 305 |