Rmu_sc0010546.1_g000003

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010546.1
OG0000187
Physical Location & Seq
Reverse (-)
3638 .. 4880
1243 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010546.1_g000003.1.cds

Sequence Viewer

Length: 1122 bp
atgagctctgttgatgccatggctgctagattagccacctctcttgctattgctgaaggtaagaggcagattgatttgcacccaacacagggccaaggtttgcgacaagcaaacgtgttcttgaggattcatggagcattgcaagtggaggaagcggaggagcagagggtgctcttcactttgtcagaccctgcagatcgtgttcgagtctggcgcggtgcgccatggggctataatcattctccagtggcattggcgtggtatgatggcatcatgacagttgcaaaggtccccctgaccatggggtcttactggatcaccctccaggagatcctgccggcgttccagtcagaaagagttatgactatgattggctacacattgagggattttcaagagatcgacaagaatgccaagaaggttgggaagctttgggttagggttgagatcccattgaataagccgttgccgtttaagcgatggtatctagtggaggacgaagttgagttttggtgcaagtttcggtatgacaagctgtttgggcgatgttccacttgtggccttgtaaagcacgttggactgtcgtgctcggggccggatatggatgaggacgatgatgctgctgagcggactatgttgggatcccagggttgggcttcggaggcaaatgggggtggcatgccaatgcaggggagtgtaggggcatcatcttctggcacagcaagcactggcggggctcactggtatgagggcttcggctgcgagccctctttgagtgccttgtttccgaagcaaaagagacaggtggtggtgcgtgacctccagcaaaccgccggaactccagagcgcctcactggcaaacgtcatggacgtgaagatggcttgaccatatcccctaagaagctgaaactgagtttggctgtgggtaagagaaacctcatttcggattctgaaaagcttggtttggatccggtcttgcaggtagagtctagttctggtagcatgaagaagaagagaggaagacctacaggtagtaagaataagtcatcttctggtgacaaggctatgacctcaaagcatgaggaatgtcatacgcagcacaagtctcccaacaggaagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

373

Amino Acids

41.19

Weight (kDa)

9.24

Isoelectric Point (pI)

48.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000187)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20170 FvH4_4g06831
rosa_chinensis RchiOBHm_Chr1g0321991 RchiOBHm_Chr2g0161811
rosa_laevigata RLG00000015375 RLG00000018377
rosa_multiflora Rmu_co8011754.1_g000001 Rmu_co8019986.1_g000001 Rmu_co8067766.1_g000001 Rmu_co8156128.1_g000001 Rmu_co8219154.1_g000003 Rmu_co8297235.1_g000001 Rmu_co8345223.1_g000001 Rmu_co8364775.1_g000001 Rmu_co8465075.1_g000001 Rmu_sc0000007.1_g000002 Rmu_sc0000054.1_g000015 Rmu_sc0000054.1_g000023 Rmu_sc0000145.1_g000010 Rmu_sc0000166.1_g000006 Rmu_sc0000218.1_g000012 Rmu_sc0000339.1_g000008 Rmu_sc0000342.1_g000015 Rmu_sc0000464.1_g000008 Rmu_sc0000620.1_g000003 Rmu_sc0000638.1_g000017 Rmu_sc0000890.1_g000007 Rmu_sc0000894.1_g000024 Rmu_sc0000909.1_g000010 Rmu_sc0000928.1_g000020 Rmu_sc0000977.1_g000007 Rmu_sc0001022.1_g000003 Rmu_sc0001035.1_g000037 Rmu_sc0001060.1_g000008 Rmu_sc0001168.1_g000005 Rmu_sc0001173.1_g000022 Rmu_sc0001179.1_g000016 Rmu_sc0001408.1_g000003 Rmu_sc0001455.1_g000005 Rmu_sc0001484.1_g000008 Rmu_sc0001585.1_g000010 Rmu_sc0001702.1_g000030 Rmu_sc0001755.1_g000063 Rmu_sc0001903.1_g000009 Rmu_sc0002099.1_g000001 Rmu_sc0002142.1_g000012 Rmu_sc0002158.1_g000014 Rmu_sc0002307.1_g000009 Rmu_sc0002358.1_g000013 Rmu_sc0002421.1_g000002 Rmu_sc0002426.1_g000003 Rmu_sc0002438.1_g000001 Rmu_sc0002461.1_g000001 Rmu_sc0002508.1_g000003 Rmu_sc0002532.1_g000056 Rmu_sc0002583.1_g000002 Rmu_sc0002927.1_g000033 Rmu_sc0003033.1_g000040 Rmu_sc0003271.1_g000006 Rmu_sc0003381.1_g000006 Rmu_sc0003507.1_g000007 Rmu_sc0003578.1_g000003 Rmu_sc0003693.1_g000004 Rmu_sc0003693.1_g000005 Rmu_sc0003704.1_g000003 Rmu_sc0003840.1_g000002 Rmu_sc0004084.1_g000026 Rmu_sc0004193.1_g000007 Rmu_sc0004234.1_g000033 Rmu_sc0004235.1_g000025 Rmu_sc0004435.1_g000006 Rmu_sc0004727.1_g000003 Rmu_sc0004741.1_g000001 Rmu_sc0004926.1_g000004 Rmu_sc0005365.1_g000001 Rmu_sc0005392.1_g000007 Rmu_sc0005415.1_g000001 Rmu_sc0005539.1_g000007 Rmu_sc0005708.1_g000017 Rmu_sc0006317.1_g000007 Rmu_sc0006453.1_g000054 Rmu_sc0006536.1_g000004 Rmu_sc0006740.1_g000022 Rmu_sc0006763.1_g000012 Rmu_sc0007115.1_g000002 Rmu_sc0007115.1_g000010 Rmu_sc0007129.1_g000017 Rmu_sc0007131.1_g000010 Rmu_sc0008373.1_g000008 Rmu_sc0009005.1_g000008 Rmu_sc0009252.1_g000007 Rmu_sc0009599.1_g000022 Rmu_sc0009785.1_g000027 Rmu_sc0009891.1_g000003 Rmu_sc0010099.1_g000010 Rmu_sc0010266.1_g000008 Rmu_sc0010334.1_g000003 Rmu_sc0010381.1_g000001 Rmu_sc0010496.1_g000003 Rmu_sc0010496.1_g000004 Rmu_sc0010546.1_g000003 Rmu_sc0011482.1_g000006 Rmu_sc0011875.1_g000010 Rmu_sc0011917.1_g000006 Rmu_sc0012293.1_g000004 Rmu_sc0012847.1_g000003 Rmu_sc0013773.1_g000001 Rmu_sc0016060.1_g000003 Rmu_sc0016170.1_g000013 Rmu_sc0016393.1_g000002 Rmu_sc0017589.1_g000001 Rmu_sc0017786.1_g000005 Rmu_sc0018326.1_g000002 Rmu_sc0020760.1_g000001 Rmu_sc0021262.1_g000003 Rmu_sc0023851.1_g000002 Rmu_sc0024044.1_g000001 Rmu_sc0026820.1_g000001 Rmu_sc0032306.1_g000001 Rmu_sc0035666.1_g000001 Rmu_sc0036881.1_g000001 Rmu_sc0037030.1_g000001 Rmu_sc0037158.1_g000001 Rmu_ssc0000016.1_g000002 Rmu_ssc0000044.1_g000012 Rmu_ssc0000044.1_g000014 Rmu_ssc0000050.1_g000064 Rmu_ssc0000064.1_g000022 Rmu_ssc0000154.1_g000037 Rmu_ssc0000178.1_g000013 Rmu_ssc0000217.1_g000022 Rmu_ssc0000392.1_g000004
rosa_roxburghii Rroxscaffold_3G00242000 Rroxscaffold_3G00242530 Rroxscaffold_6G00406010
rosa_rugosa Rorug01G0062000 Rorug02G0224000 Rorug02G0262900 Rorug02G0263000 Rorug02G0358900 Rorug02G0360500 Rorug02G0378500.1 Rorug02G0378600 Rorug02G0394700 Rorug03G0122900 Rorug03G0254600 Rorug03G0254700 Rorug03G0254800 Rorug04G0042200.1 Rorug04G0378100 Rorug05G0053400 Rorug05G0238600 Rorug05G0364500 Rorug05G0562000 Rorug06G0089300 Rorug06G0089400 Rorug06G0145700 Rorug07G0111600 Rorug07G0229500.1 Rorug07G0287600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 304
Acc36I ACCTGC 1 cut(s) 970
AccBSI CCGCTC 1 cut(s) 628
AccII CGCG 1 cut(s) 216
AciI CCGC 5 cut(s) 155, 216, 628, 732, 831
AclWI GGATC 7 cut(s) 323, 325, 442, 636, 649, 962, 975
AcuI CTGAAG 1 cut(s) 75
AfiI CCNNNNNNNGG 7 cut(s) 88, 89, 301, 651, 652, 689, 943
AflIII ACRYGT 1 cut(s) 114
AgsI TTSAA 2 cut(s) 395, 457
AjiI CACGTC 1 cut(s) 872
AjnI CCWGG 2 cut(s) 324, 645
AjuI GAANNNNNNNTTGG 2 cut(s) 899, 931
AluBI AGCT 5 cut(s) 6, 430, 535, 904, 958
AluI AGCT 5 cut(s) 6, 430, 535, 904, 958
Alw21I GWGCWC 3 cut(s) 8, 174, 590
Alw26I GTCTC 2 cut(s) 793, 1110
AlwI GGATC 7 cut(s) 323, 325, 442, 636, 649, 962, 975
AlwNI CAGNNNCTG 1 cut(s) 191
Ama87I CYCGRG 1 cut(s) 589
AoxI GGCC 3 cut(s) 91, 559, 593
ApeKI GCWGC 4 cut(s) 23, 620, 759, 1096
ArsI GACNNNNNNTTYG 2 cut(s) 521, 553
AspLEI GCGC 3 cut(s) 216, 223, 849
AspS9I GGNCC 3 cut(s) 91, 289, 593
AsuHPI GGTGA 2 cut(s) 310, 1067
AvaI CYCGRG 1 cut(s) 589
AvaII GGWCC 1 cut(s) 289
BamHI GGATCC 2 cut(s) 641, 967
BanII GRGCYC 3 cut(s) 8, 739, 768
BarI GAAGNNNNNNTAC 2 cut(s) 737, 769
BbsI GAAGAC 1 cut(s) 1027
Bbv12I GWGCWC 3 cut(s) 8, 174, 590
BbvI GCAGC 4 cut(s) 10, 607, 746, 1108
BccI CCATC 3 cut(s) 260, 474, 872
BceAI ACGGC 2 cut(s) 448, 454
BcgI CGANNNNNNTGC 4 cut(s) 392, 426, 602, 636
BciT130I CCWGG 2 cut(s) 326, 647
BcoDI GTCTC 2 cut(s) 793, 1110
BfaI CTAG 3 cut(s) 27, 488, 990
BfmI CTRYAG 2 cut(s) 192, 1026
BfoI RGCGCY 1 cut(s) 850
BfuAI ACCTGC 1 cut(s) 970
BglI GCCNNNNNGGC 1 cut(s) 855
BisI GCNGC 4 cut(s) 24, 621, 760, 1097
BlpI GCTNAGC 1 cut(s) 624
BlsI GCNGC 4 cut(s) 25, 622, 761, 1098
Bme1390I CCNGG 2 cut(s) 326, 647
Bme18I GGWCC 1 cut(s) 289
BmeT110I CYCGRG 1 cut(s) 589
BmgBI CACGTC 1 cut(s) 872
BmgT120I GGNCC 3 cut(s) 91, 289, 593
BmiI GGNNCC 4 cut(s) 291, 594, 643, 969
BmrFI CCNGG 2 cut(s) 326, 647
BmsI GCATC 4 cut(s) 4, 279, 607, 713
BpiI GAAGAC 1 cut(s) 1027
BpmI CTGGAG 4 cut(s) 228, 308, 806, 825
Bpu1102I GCTNAGC 1 cut(s) 624
BpuEI CTTGAG 1 cut(s) 142
BsaJI CCNNGG 6 cut(s) 18, 94, 224, 300, 645, 646
BsaWI WCCGGW 1 cut(s) 970
Bsc4I CCNNNNNNNGG 7 cut(s) 88, 89, 301, 651, 652, 689, 943
Bse118I RCCGGY 1 cut(s) 337
Bse1I ACTGG 6 cut(s) 245, 317, 346, 733, 746, 859
Bse3DI GCAATG 1 cut(s) 137
BseBI CCWGG 2 cut(s) 326, 647
BseDI CCNNGG 6 cut(s) 18, 94, 224, 300, 645, 646
BseGI GGATG 1 cut(s) 610
BseLI CCNNNNNNNGG 7 cut(s) 88, 89, 301, 651, 652, 689, 943
BseMI GCAATG 1 cut(s) 137
BseMII CTCAG 2 cut(s) 615, 902
BseNI ACTGG 6 cut(s) 245, 317, 346, 733, 746, 859
BseRI GAGGAG 1 cut(s) 173
BseXI GCAGC 4 cut(s) 10, 607, 746, 1108
Bsh1236I CGCG 1 cut(s) 216
BshFI GGCC 3 cut(s) 93, 561, 595
BsiHKAI GWGCWC 3 cut(s) 8, 174, 590
BsiHKCI CYCGRG 1 cut(s) 589
BsiSI CCGG 4 cut(s) 338, 596, 834, 971
BslFI GGGAC 1 cut(s) 275
BslI CCNNNNNNNGG 7 cut(s) 88, 89, 301, 651, 652, 689, 943
BsmAI GTCTC 2 cut(s) 793, 1110
BsmFI GGGAC 1 cut(s) 275
BsmI GAATGC 1 cut(s) 415
BsnI GGCC 3 cut(s) 93, 561, 595
BsoBI CYCGRG 1 cut(s) 589
Bsp1286I GDGCHC 5 cut(s) 8, 174, 590, 739, 768
Bsp143I GATC 7 cut(s) 196, 315, 330, 399, 447, 641, 967
Bsp1720I GCTNAGC 1 cut(s) 624
Bsp19I CCATGG 3 cut(s) 18, 224, 300
BspACI CCGC 5 cut(s) 155, 216, 628, 732, 831
BspANI GGCC 3 cut(s) 93, 561, 595
BspCNI CTCAG 2 cut(s) 616, 903
BspFNI CGCG 1 cut(s) 216
BspHI TCATGA 1 cut(s) 273
BspLI GGNNCC 4 cut(s) 291, 594, 643, 969
BspMAI CTGCAG 1 cut(s) 196
BspMI ACCTGC 1 cut(s) 970
BspPI GGATC 7 cut(s) 323, 325, 442, 636, 649, 962, 975
BspQI GCTCTTC 1 cut(s) 179
BsrBI CCGCTC 1 cut(s) 628
BsrDI GCAATG 1 cut(s) 137
BsrFI RCCGGY 1 cut(s) 337
BsrI ACTGG 6 cut(s) 245, 317, 346, 733, 746, 859
BssAI RCCGGY 1 cut(s) 337
BssECI CCNNGG 6 cut(s) 18, 94, 224, 300, 645, 646
BssMI GATC 7 cut(s) 196, 315, 330, 399, 447, 641, 967
BssT1I CCWWGG 4 cut(s) 18, 94, 224, 300
Bst2UI CCWGG 2 cut(s) 326, 647
Bst4CI ACNGT 2 cut(s) 280, 582
Bst6I CTCTTC 2 cut(s) 179, 1007
BstAPI GCANNNNNTGC 1 cut(s) 169
BstC8I GCNNGC 4 cut(s) 339, 680, 724, 764
BstDEI CTNAG 3 cut(s) 624, 897, 911
BstDSI CCRYGG 3 cut(s) 18, 224, 300
BstF5I GGATG 1 cut(s) 610
BstFNI CGCG 1 cut(s) 216
BstH2I RGCGCY 1 cut(s) 850
BstHHI GCGC 3 cut(s) 216, 223, 849
BstKTI GATC 7 cut(s) 199, 318, 333, 402, 450, 644, 970
BstMAI GTCTC 2 cut(s) 793, 1110
BstMBI GATC 7 cut(s) 196, 315, 330, 399, 447, 641, 967
BstNI CCWGG 2 cut(s) 326, 647
BstNSI RCATGY 1 cut(s) 682
BstSCI CCNGG 2 cut(s) 324, 645
BstSFI CTRYAG 2 cut(s) 192, 1026
BstUI CGCG 1 cut(s) 216
BstV1I GCAGC 4 cut(s) 10, 607, 746, 1108
BstV2I GAAGAC 1 cut(s) 1027
BstX2I RGATCY 4 cut(s) 330, 447, 641, 967
BstYI RGATCY 4 cut(s) 330, 447, 641, 967
BsuRI GGCC 3 cut(s) 93, 561, 595
BtgI CCRYGG 3 cut(s) 18, 224, 300
BtgZI GCGATG 2 cut(s) 493, 559
BtrI CACGTC 1 cut(s) 872
BtsCI GGATG 1 cut(s) 610
BtsIMutI CAGTG 4 cut(s) 252, 726, 739, 852
BveI ACCTGC 1 cut(s) 970
Cac8I GCNNGC 4 cut(s) 339, 680, 724, 764
CaiI CAGNNNCTG 1 cut(s) 191
CciI TCATGA 1 cut(s) 273
CfoI GCGC 3 cut(s) 216, 223, 849
Cfr10I RCCGGY 1 cut(s) 337
Cfr13I GGNCC 3 cut(s) 91, 289, 593
CspCI CAANNNNNGTGG 2 cut(s) 25, 60
CviAII CATG 9 cut(s) 19, 131, 225, 274, 301, 679, 866, 1003, 1079
DdeI CTNAG 3 cut(s) 624, 897, 911
DpnI GATC 7 cut(s) 198, 317, 332, 401, 449, 643, 969
DpnII GATC 7 cut(s) 196, 315, 330, 399, 447, 641, 967
DrdI GACNNNNNNGTC 1 cut(s) 304
DseDI GACNNNNNNGTC 1 cut(s) 304
Eam1104I CTCTTC 2 cut(s) 179, 1007
EarI CTCTTC 2 cut(s) 179, 1007
Ecl136II GAGCTC 1 cut(s) 6
Eco130I CCWWGG 4 cut(s) 18, 94, 224, 300
Eco24I GRGCYC 3 cut(s) 8, 739, 768
Eco47I GGWCC 1 cut(s) 289
Eco53kI GAGCTC 1 cut(s) 6
Eco57I CTGAAG 1 cut(s) 75
Eco88I CYCGRG 1 cut(s) 589
EcoICRI GAGCTC 1 cut(s) 6
EcoO109I RGGNCCY 1 cut(s) 289
EcoRII CCWGG 2 cut(s) 324, 645
EcoT14I CCWWGG 4 cut(s) 18, 94, 224, 300
EcoT38I GRGCYC 3 cut(s) 8, 739, 768
ErhI CCWWGG 4 cut(s) 18, 94, 224, 300
FaeI CATG 9 cut(s) 22, 134, 228, 277, 304, 682, 869, 1006, 1082
FaqI GGGAC 1 cut(s) 275
FatI CATG 9 cut(s) 18, 130, 224, 273, 300, 678, 865, 1002, 1078
FauI CCCGC 1 cut(s) 725
Fnu4HI GCNGC 4 cut(s) 24, 621, 760, 1097
FokI GGATG 1 cut(s) 617
FriOI GRGCYC 3 cut(s) 8, 739, 768
Fsp4HI GCNGC 4 cut(s) 24, 621, 760, 1097
FspBI CTAG 3 cut(s) 27, 488, 990
GlaI GCGC 3 cut(s) 215, 222, 848
GluI GCNGC 4 cut(s) 24, 621, 760, 1097
GsuI CTGGAG 4 cut(s) 228, 308, 806, 825
HaeII RGCGCY 1 cut(s) 850
HaeIII GGCC 3 cut(s) 93, 561, 595
HapII CCGG 4 cut(s) 338, 596, 834, 971
HhaI GCGC 3 cut(s) 216, 223, 849
Hin1II CATG 9 cut(s) 22, 134, 228, 277, 304, 682, 869, 1006, 1082
Hin6I GCGC 3 cut(s) 214, 221, 847
HinP1I GCGC 3 cut(s) 214, 221, 847
HindIII AAGCTT 2 cut(s) 428, 956
HinfI GANTC 4 cut(s) 127, 207, 947, 986
HpaII CCGG 4 cut(s) 338, 596, 834, 971
HphI GGTGA 2 cut(s) 310, 1067
Hpy188I TCNGA 6 cut(s) 187, 352, 661, 789, 946, 952
Hpy188III TCNNGA 4 cut(s) 121, 274, 395, 842
HpyAV CCTTC 2 cut(s) 50, 412
HpyCH4III ACNGT 2 cut(s) 280, 582
HpyCH4IV ACGT 4 cut(s) 114, 573, 862, 871
HpyCH4V TGCA 7 cut(s) 79, 142, 194, 284, 516, 688, 979
HpyF3I CTNAG 3 cut(s) 624, 897, 911
HpySE526I ACGT 4 cut(s) 114, 573, 862, 871
Hsp92II CATG 9 cut(s) 22, 134, 228, 277, 304, 682, 869, 1006, 1082
HspAI GCGC 3 cut(s) 214, 221, 847
KroI GCCGGC 1 cut(s) 337
KroNI GCCGGC 1 cut(s) 339
Kzo9I GATC 7 cut(s) 196, 315, 330, 399, 447, 641, 967
LguI GCTCTTC 1 cut(s) 179
LmnI GCTCC 2 cut(s) 134, 160
Lsp1109I GCAGC 4 cut(s) 10, 607, 746, 1108
LweI GCATC 4 cut(s) 4, 279, 607, 713
MaeI CTAG 3 cut(s) 27, 488, 990
MaeII ACGT 4 cut(s) 114, 573, 862, 871
MaeIII GTNAC 2 cut(s) 815, 1055
MalI GATC 7 cut(s) 198, 317, 332, 401, 449, 643, 969
MbiI CCGCTC 1 cut(s) 628
MboI GATC 7 cut(s) 196, 315, 330, 399, 447, 641, 967
MboII GAAGA 8 cut(s) 166, 702, 887, 1018, 1021, 1024, 1032, 1041
MflI RGATCY 4 cut(s) 330, 447, 641, 967
MhlI GDGCHC 5 cut(s) 8, 174, 590, 739, 768
MlyI GAGTC 2 cut(s) 216, 995
MmeI TCCRAC 1 cut(s) 556
MroNI GCCGGC 1 cut(s) 337
MseI TTAA 1 cut(s) 474
MslI CAYNNNNRTG 4 cut(s) 256, 683, 744, 870
MspI CCGG 4 cut(s) 338, 596, 834, 971
MspR9I CCNGG 2 cut(s) 326, 647
Mva1269I GAATGC 1 cut(s) 415
MvaI CCWGG 2 cut(s) 326, 647
MvnI CGCG 1 cut(s) 216
NaeI GCCGGC 1 cut(s) 339
NcoI CCATGG 3 cut(s) 18, 224, 300
NdeII GATC 7 cut(s) 196, 315, 330, 399, 447, 641, 967
NgoMIV GCCGGC 1 cut(s) 337
NlaIII CATG 9 cut(s) 22, 134, 228, 277, 304, 682, 869, 1006, 1082
NlaIV GGNNCC 4 cut(s) 291, 594, 643, 969
NmuCI GTSAC 2 cut(s) 815, 1055
NspI RCATGY 1 cut(s) 682
PaeI GCATGC 1 cut(s) 682
PagI TCATGA 1 cut(s) 273
PasI CCCWGGG 1 cut(s) 646
PciSI GCTCTTC 1 cut(s) 179
PcsI WCGNNNNNNNCGW 1 cut(s) 868
PctI GAATGC 1 cut(s) 415
PdiI GCCGGC 1 cut(s) 339
PfeI GAWTC 2 cut(s) 127, 947
PfoI TCCNGGA 1 cut(s) 324
PkrI GCNGC 4 cut(s) 25, 622, 761, 1098
PleI GAGTC 2 cut(s) 215, 994
PpsI GAGTC 2 cut(s) 215, 994
PpuMI RGGWCCY 1 cut(s) 289
Psp124BI GAGCTC 1 cut(s) 8
Psp5II RGGWCCY 1 cut(s) 289
Psp6I CCWGG 2 cut(s) 324, 645
PspGI CCWGG 2 cut(s) 324, 645
PspN4I GGNNCC 4 cut(s) 291, 594, 643, 969
PspPI GGNCC 3 cut(s) 91, 289, 593
PspPPI RGGWCCY 1 cut(s) 289
PstI CTGCAG 1 cut(s) 196
PstNI CAGNNNCTG 1 cut(s) 191
PsuI RGATCY 4 cut(s) 330, 447, 641, 967
RseI CAYNNNNRTG 4 cut(s) 256, 683, 744, 870
SacI GAGCTC 1 cut(s) 8
SapI GCTCTTC 1 cut(s) 179
SaqAI TTAA 1 cut(s) 474
SatI GCNGC 4 cut(s) 24, 621, 760, 1097
Sau3AI GATC 7 cut(s) 196, 315, 330, 399, 447, 641, 967
Sau96I GGNCC 3 cut(s) 91, 289, 593
SchI GAGTC 2 cut(s) 216, 995
ScrFI CCNGG 2 cut(s) 326, 647
SduI GDGCHC 5 cut(s) 8, 174, 590, 739, 768
SfaNI GCATC 4 cut(s) 4, 279, 607, 713
SfcI CTRYAG 2 cut(s) 192, 1026
SinI GGWCC 1 cut(s) 289
SmiMI CAYNNNNRTG 4 cut(s) 256, 683, 744, 870
SmlI CTYRAG 1 cut(s) 121
SmoI CTYRAG 1 cut(s) 121
SphI GCATGC 1 cut(s) 682
SsiI CCGC 5 cut(s) 155, 216, 628, 732, 831
SspMI CTAG 3 cut(s) 27, 488, 990
SstI GAGCTC 1 cut(s) 8
StyD4I CCNGG 2 cut(s) 324, 645
StyI CCWWGG 4 cut(s) 18, 94, 224, 300
TaaI ACNGT 2 cut(s) 280, 582
TaiI ACGT 4 cut(s) 117, 576, 865, 874
TaqI TCGA 2 cut(s) 205, 402
TfiI GAWTC 2 cut(s) 127, 947
Tru1I TTAA 1 cut(s) 474
Tru9I TTAA 1 cut(s) 474
TscAI CASTG 4 cut(s) 252, 733, 746, 859
TseFI GTSAC 2 cut(s) 815, 1055
TseI GCWGC 4 cut(s) 23, 620, 759, 1096
Tsp45I GTSAC 2 cut(s) 815, 1055
TspDTI ATGAA 2 cut(s) 119, 1019
TspRI CASTG 4 cut(s) 252, 733, 746, 859
VpaK11BI GGWCC 1 cut(s) 289
XceI RCATGY 1 cut(s) 682
XspI CTAG 3 cut(s) 27, 488, 990
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.