Rmu_sc0004193.1_g000007

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004193.1
OG0000187
Physical Location & Seq
Reverse (-)
21073 .. 22290
1218 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004193.1_g000007.1.cds

Sequence Viewer

Length: 1218 bp
atgagttctgttaatgccatggctgcccgactcgcctcctctcttgcactggcagaggggaagaagaaggtagatctccgtccatcgcaaggcaagagcttgcgacaatatgaagtttttatggttggaaagctcctcattgctagggagttcaaggtccgttccttcctaggtatgtttcgatcttcctggaaggtcaatgggacgctgaaagttgaagaagctgaaggaggtagggttttgttcactttttcagatcctacagaccgagctagggtttggaggggcgcaccatggggttttaaccgtgctcctgtggctttggctgagtatgatggggttatgccagttgagaaggcgccattggtgaaatcctcctattggatcacgctgcagggcattccacctgcgtttagatctgaaagggggatgacgatgatcggatatacgttgggggactttcaggggattgataagcaggggaggaaggttggcaagtaccggattcgggttgagattcctctgatcaggccattgtcctttcaacgttggtattgggtggaggacacgggggagtttctatgcaaattcaggtatgataagttgtttgggaggtgtggagtgtgtgggttgatcacccatgttggactgccgtgctcggggccgccgttgaacgaagaagatgatgctgcagagcgcacggtattagggccgccaccggttgcacagggtaatgccatgcaggttgggatcagcggcttgactacggggtcgggttctgaaggttgcagccatgaagctgcgttcaatcctagggtttctttcaatgggcacagtttgatcttcaagacgcaactccctaggatgatcccggagcaactcctgtgcaatcataaatatttggtgcacaaaccacgtcgtaaggtaagcattagagagatagatgagtctgatggtatggtggaatcattaacaggcaagcgtcgtcctagggttgaggcagaaatcaccatatctccaaagaaactcaaattgagtttggcagttagtaaaaaaaatctggagcctgctgatatggggctggtctcactgccacataatgttccaggcatggtgaagaagaagagagggaggccggtgggaagcaaaaataaaatcttatctggtaccgtggcaaagatgaaggatttgaaggtagatggtgttgggaagcggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

405

Amino Acids

44.85

Weight (kDa)

9.97

Isoelectric Point (pI)

34.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000187)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20170 FvH4_4g06831
rosa_chinensis RchiOBHm_Chr1g0321991 RchiOBHm_Chr2g0161811
rosa_laevigata RLG00000015375 RLG00000018377
rosa_multiflora Rmu_co8011754.1_g000001 Rmu_co8019986.1_g000001 Rmu_co8067766.1_g000001 Rmu_co8156128.1_g000001 Rmu_co8219154.1_g000003 Rmu_co8297235.1_g000001 Rmu_co8345223.1_g000001 Rmu_co8364775.1_g000001 Rmu_co8465075.1_g000001 Rmu_sc0000007.1_g000002 Rmu_sc0000054.1_g000015 Rmu_sc0000054.1_g000023 Rmu_sc0000145.1_g000010 Rmu_sc0000166.1_g000006 Rmu_sc0000218.1_g000012 Rmu_sc0000339.1_g000008 Rmu_sc0000342.1_g000015 Rmu_sc0000464.1_g000008 Rmu_sc0000620.1_g000003 Rmu_sc0000638.1_g000017 Rmu_sc0000890.1_g000007 Rmu_sc0000894.1_g000024 Rmu_sc0000909.1_g000010 Rmu_sc0000928.1_g000020 Rmu_sc0000977.1_g000007 Rmu_sc0001022.1_g000003 Rmu_sc0001035.1_g000037 Rmu_sc0001060.1_g000008 Rmu_sc0001168.1_g000005 Rmu_sc0001173.1_g000022 Rmu_sc0001179.1_g000016 Rmu_sc0001408.1_g000003 Rmu_sc0001455.1_g000005 Rmu_sc0001484.1_g000008 Rmu_sc0001585.1_g000010 Rmu_sc0001702.1_g000030 Rmu_sc0001755.1_g000063 Rmu_sc0001903.1_g000009 Rmu_sc0002099.1_g000001 Rmu_sc0002142.1_g000012 Rmu_sc0002158.1_g000014 Rmu_sc0002307.1_g000009 Rmu_sc0002358.1_g000013 Rmu_sc0002421.1_g000002 Rmu_sc0002426.1_g000003 Rmu_sc0002438.1_g000001 Rmu_sc0002461.1_g000001 Rmu_sc0002508.1_g000003 Rmu_sc0002532.1_g000056 Rmu_sc0002583.1_g000002 Rmu_sc0002927.1_g000033 Rmu_sc0003033.1_g000040 Rmu_sc0003271.1_g000006 Rmu_sc0003381.1_g000006 Rmu_sc0003507.1_g000007 Rmu_sc0003578.1_g000003 Rmu_sc0003693.1_g000004 Rmu_sc0003693.1_g000005 Rmu_sc0003704.1_g000003 Rmu_sc0003840.1_g000002 Rmu_sc0004084.1_g000026 Rmu_sc0004193.1_g000007 Rmu_sc0004234.1_g000033 Rmu_sc0004235.1_g000025 Rmu_sc0004435.1_g000006 Rmu_sc0004727.1_g000003 Rmu_sc0004741.1_g000001 Rmu_sc0004926.1_g000004 Rmu_sc0005365.1_g000001 Rmu_sc0005392.1_g000007 Rmu_sc0005415.1_g000001 Rmu_sc0005539.1_g000007 Rmu_sc0005708.1_g000017 Rmu_sc0006317.1_g000007 Rmu_sc0006453.1_g000054 Rmu_sc0006536.1_g000004 Rmu_sc0006740.1_g000022 Rmu_sc0006763.1_g000012 Rmu_sc0007115.1_g000002 Rmu_sc0007115.1_g000010 Rmu_sc0007129.1_g000017 Rmu_sc0007131.1_g000010 Rmu_sc0008373.1_g000008 Rmu_sc0009005.1_g000008 Rmu_sc0009252.1_g000007 Rmu_sc0009599.1_g000022 Rmu_sc0009785.1_g000027 Rmu_sc0009891.1_g000003 Rmu_sc0010099.1_g000010 Rmu_sc0010266.1_g000008 Rmu_sc0010334.1_g000003 Rmu_sc0010381.1_g000001 Rmu_sc0010496.1_g000003 Rmu_sc0010496.1_g000004 Rmu_sc0010546.1_g000003 Rmu_sc0011482.1_g000006 Rmu_sc0011875.1_g000010 Rmu_sc0011917.1_g000006 Rmu_sc0012293.1_g000004 Rmu_sc0012847.1_g000003 Rmu_sc0013773.1_g000001 Rmu_sc0016060.1_g000003 Rmu_sc0016170.1_g000013 Rmu_sc0016393.1_g000002 Rmu_sc0017589.1_g000001 Rmu_sc0017786.1_g000005 Rmu_sc0018326.1_g000002 Rmu_sc0020760.1_g000001 Rmu_sc0021262.1_g000003 Rmu_sc0023851.1_g000002 Rmu_sc0024044.1_g000001 Rmu_sc0026820.1_g000001 Rmu_sc0032306.1_g000001 Rmu_sc0035666.1_g000001 Rmu_sc0036881.1_g000001 Rmu_sc0037030.1_g000001 Rmu_sc0037158.1_g000001 Rmu_ssc0000016.1_g000002 Rmu_ssc0000044.1_g000012 Rmu_ssc0000044.1_g000014 Rmu_ssc0000050.1_g000064 Rmu_ssc0000064.1_g000022 Rmu_ssc0000154.1_g000037 Rmu_ssc0000178.1_g000013 Rmu_ssc0000217.1_g000022 Rmu_ssc0000392.1_g000004
rosa_roxburghii Rroxscaffold_3G00242000 Rroxscaffold_3G00242530 Rroxscaffold_6G00406010
rosa_rugosa Rorug01G0062000 Rorug02G0224000 Rorug02G0262900 Rorug02G0263000 Rorug02G0358900 Rorug02G0360500 Rorug02G0378500.1 Rorug02G0378600 Rorug02G0394700 Rorug03G0122900 Rorug03G0254600 Rorug03G0254700 Rorug03G0254800 Rorug04G0042200.1 Rorug04G0378100 Rorug05G0053400 Rorug05G0238600 Rorug05G0364500 Rorug05G0562000 Rorug06G0089300 Rorug06G0089400 Rorug06G0145700 Rorug07G0111600 Rorug07G0229500.1 Rorug07G0287600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 415
AasI GACNNNNNNGTC 1 cut(s) 769
Acc36I ACCTGC 2 cut(s) 415, 733
Acc65I GGTACC 1 cut(s) 1166
AccB1I GGYRCC 2 cut(s) 358, 1166
AciI CCGC 4 cut(s) 665, 713, 756, 1213
AclI AACGTT 1 cut(s) 547
AclWI GGATC 4 cut(s) 251, 392, 758, 862
AcsI RAATTY 1 cut(s) 587
AcuI CTGAAG 2 cut(s) 246, 801
AcyI GRCGYC 1 cut(s) 359
AfaI GTAC 2 cut(s) 500, 1168
AfiI CCNNNNNNNGG 5 cut(s) 89, 274, 381, 508, 659
AgeI ACCGGT 1 cut(s) 718
AgsI TTSAA 8 cut(s) 154, 218, 545, 673, 808, 826, 847, 1192
AjiI CACGTC 1 cut(s) 917
AjnI CCWGG 2 cut(s) 188, 1105
AjuI GAANNNNNNNTTGG 2 cut(s) 347, 379
AluBI AGCT 5 cut(s) 99, 133, 224, 272, 800
AluI AGCT 5 cut(s) 99, 133, 224, 272, 800
Alw21I GWGCWC 3 cut(s) 313, 659, 909
Alw26I GTCTC 1 cut(s) 1090
Alw44I GTGCAC 1 cut(s) 905
AlwI GGATC 4 cut(s) 251, 392, 758, 862
Ama87I CYCGRG 1 cut(s) 658
AoxI GGCC 4 cut(s) 530, 662, 710, 1133
ApaLI GTGCAC 1 cut(s) 905
ApeKI GCWGC 5 cut(s) 23, 391, 689, 789, 800
ApoI RAATTY 1 cut(s) 587
AsiGI ACCGGT 1 cut(s) 718
Asp718I GGTACC 1 cut(s) 1166
AspA2I CCTAGG 4 cut(s) 169, 812, 860, 989
AspLEI GCGC 3 cut(s) 290, 361, 699
AspS9I GGNCC 3 cut(s) 157, 662, 710
AsuC2I CCSGG 1 cut(s) 872
AsuHPI GGTGA 4 cut(s) 379, 628, 1000, 1126
AvaI CYCGRG 1 cut(s) 658
AvaII GGWCC 1 cut(s) 157
AvrII CCTAGG 4 cut(s) 169, 812, 860, 989
BaeGI GKGCMC 2 cut(s) 834, 909
BanI GGYRCC 2 cut(s) 358, 1166
Bbv12I GWGCWC 3 cut(s) 313, 659, 909
BbvI GCAGC 5 cut(s) 10, 378, 676, 787, 801
BccI CCATC 4 cut(s) 91, 329, 947, 1193
BceAI ACGGC 2 cut(s) 637, 652
BciT130I CCWGG 2 cut(s) 190, 1107
BclI TGATCA 2 cut(s) 525, 633
BcnI CCSGG 1 cut(s) 872
BcoDI GTCTC 1 cut(s) 1090
BfaI CTAG 6 cut(s) 144, 170, 273, 813, 861, 990
BfmI CTRYAG 3 cut(s) 261, 392, 690
BfoI RGCGCY 1 cut(s) 362
BfuAI ACCTGC 2 cut(s) 415, 733
BglII AGATCT 2 cut(s) 73, 416
BisI GCNGC 8 cut(s) 24, 392, 665, 690, 713, 757, 790, 801
BlnI CCTAGG 4 cut(s) 169, 812, 860, 989
BlsI GCNGC 8 cut(s) 25, 393, 666, 691, 714, 758, 791, 802
Bme1390I CCNGG 3 cut(s) 190, 872, 1107
Bme18I GGWCC 1 cut(s) 157
BmeT110I CYCGRG 1 cut(s) 658
BmgBI CACGTC 1 cut(s) 917
BmgT120I GGNCC 3 cut(s) 157, 662, 710
BmiI GGNNCC 4 cut(s) 360, 663, 1065, 1168
BmrFI CCNGG 3 cut(s) 190, 872, 1107
BmsI GCATC 1 cut(s) 676
BpmI CTGGAG 1 cut(s) 1082
BpuMI CCSGG 1 cut(s) 872
BsaHI GRCGYC 1 cut(s) 359
BsaI GGTCTC 1 cut(s) 1090
BsaJI CCNNGG 7 cut(s) 18, 169, 293, 812, 860, 989, 1170
BsaWI WCCGGW 2 cut(s) 501, 718
BsaXI ACNNNNNCTCC 4 cut(s) 222, 252, 1000, 1030
Bsc4I CCNNNNNNNGG 5 cut(s) 89, 274, 381, 508, 659
Bse118I RCCGGY 2 cut(s) 718, 1135
Bse1I ACTGG 2 cut(s) 54, 347
Bse3DI GCAATG 1 cut(s) 138
BseBI CCWGG 2 cut(s) 190, 1107
BseDI CCNNGG 7 cut(s) 18, 169, 293, 812, 860, 989, 1170
BseGI GGATG 2 cut(s) 435, 870
BseLI CCNNNNNNNGG 5 cut(s) 89, 274, 381, 508, 659
BseMI GCAATG 1 cut(s) 138
BseMII CTCAG 1 cut(s) 318
BseNI ACTGG 2 cut(s) 54, 347
BseRI GAGGAG 2 cut(s) 28, 125
BseSI GKGCMC 2 cut(s) 834, 909
BseXI GCAGC 5 cut(s) 10, 378, 676, 787, 801
BshFI GGCC 4 cut(s) 532, 664, 712, 1135
BshNI GGYRCC 2 cut(s) 358, 1166
BshTI ACCGGT 1 cut(s) 718
BsiHKAI GWGCWC 3 cut(s) 313, 659, 909
BsiHKCI CYCGRG 1 cut(s) 658
BsiSI CCGG 4 cut(s) 502, 719, 872, 1136
BslFI GGGAC 2 cut(s) 217, 470
BslI CCNNNNNNNGG 5 cut(s) 89, 274, 381, 508, 659
BsmAI GTCTC 1 cut(s) 1090
BsmFI GGGAC 2 cut(s) 217, 470
BsmI GAATGC 1 cut(s) 399
BsnI GGCC 4 cut(s) 532, 664, 712, 1135
Bso31I GGTCTC 1 cut(s) 1090
BsoBI CYCGRG 1 cut(s) 658
Bsp1286I GDGCHC 4 cut(s) 313, 659, 834, 909
Bsp19I CCATGG 2 cut(s) 18, 293
BspACI CCGC 4 cut(s) 665, 713, 756, 1213
BspANI GGCC 4 cut(s) 532, 664, 712, 1135
BspCNI CTCAG 1 cut(s) 319
BspLI GGNNCC 4 cut(s) 360, 663, 1065, 1168
BspMAI CTGCAG 2 cut(s) 396, 694
BspMI ACCTGC 2 cut(s) 415, 733
BspPI GGATC 4 cut(s) 251, 392, 758, 862
BspT107I GGYRCC 2 cut(s) 358, 1166
BspTNI GGTCTC 1 cut(s) 1090
BsrDI GCAATG 1 cut(s) 138
BsrFI RCCGGY 2 cut(s) 718, 1135
BsrI ACTGG 2 cut(s) 54, 347
BssAI RCCGGY 2 cut(s) 718, 1135
BssECI CCNNGG 7 cut(s) 18, 169, 293, 812, 860, 989, 1170
BssNI GRCGYC 1 cut(s) 359
BssT1I CCWWGG 6 cut(s) 18, 169, 293, 812, 860, 989
Bst2UI CCWGG 2 cut(s) 190, 1107
Bst4CI ACNGT 4 cut(s) 308, 703, 836, 1171
Bst6I CTCTTC 1 cut(s) 1118
BstACI GRCGYC 1 cut(s) 359
BstC8I GCNNGC 3 cut(s) 101, 980, 1068
BstDEI CTNAG 1 cut(s) 327
BstDSI CCRYGG 3 cut(s) 18, 293, 1170
BstF5I GGATG 2 cut(s) 435, 870
BstH2I RGCGCY 1 cut(s) 362
BstHHI GCGC 3 cut(s) 290, 361, 699
BstMAI GTCTC 1 cut(s) 1090
BstMWI GCNNNNNNNGC 3 cut(s) 23, 32, 317
BstNI CCWGG 2 cut(s) 190, 1107
BstSCI CCNGG 3 cut(s) 188, 870, 1105
BstSFI CTRYAG 3 cut(s) 261, 392, 690
BstSLI GKGCMC 2 cut(s) 834, 909
BstV1I GCAGC 5 cut(s) 10, 378, 676, 787, 801
BstX2I RGATCY 3 cut(s) 73, 256, 416
BstYI RGATCY 3 cut(s) 73, 256, 416
BsuRI GGCC 4 cut(s) 532, 664, 712, 1135
BtgI CCRYGG 3 cut(s) 18, 293, 1170
BtgZI GCGATG 1 cut(s) 69
BtrI CACGTC 1 cut(s) 917
BtsCI GGATG 2 cut(s) 435, 870
BtsI GCAGTG 1 cut(s) 1088
BtsIMutI CAGTG 2 cut(s) 47, 1088
BveI ACCTGC 2 cut(s) 415, 733
Cac8I GCNNGC 3 cut(s) 101, 980, 1068
CfoI GCGC 3 cut(s) 290, 361, 699
Cfr10I RCCGGY 2 cut(s) 718, 1135
Cfr13I GGNCC 3 cut(s) 157, 662, 710
CseI GACGC 3 cut(s) 214, 859, 971
Csp6I GTAC 2 cut(s) 499, 1167
CspAI ACCGGT 1 cut(s) 718
CviAII CATG 6 cut(s) 19, 294, 641, 739, 794, 1111
CviQI GTAC 2 cut(s) 499, 1167
DdeI CTNAG 1 cut(s) 327
DinI GGCGCC 1 cut(s) 360
DrdI GACNNNNNNGTC 1 cut(s) 769
DseDI GACNNNNNNGTC 1 cut(s) 769
Eam1104I CTCTTC 1 cut(s) 1118
EarI CTCTTC 1 cut(s) 1118
Eco130I CCWWGG 6 cut(s) 18, 169, 293, 812, 860, 989
Eco31I GGTCTC 1 cut(s) 1090
Eco47I GGWCC 1 cut(s) 157
Eco57I CTGAAG 2 cut(s) 246, 801
Eco88I CYCGRG 1 cut(s) 658
EcoRII CCWGG 2 cut(s) 188, 1105
EcoT14I CCWWGG 6 cut(s) 18, 169, 293, 812, 860, 989
EgeI GGCGCC 1 cut(s) 360
EheI GGCGCC 1 cut(s) 360
ErhI CCWWGG 6 cut(s) 18, 169, 293, 812, 860, 989
FaeI CATG 6 cut(s) 22, 297, 644, 742, 797, 1114
FaqI GGGAC 2 cut(s) 217, 470
FatI CATG 6 cut(s) 18, 293, 640, 738, 793, 1110
FbaI TGATCA 2 cut(s) 525, 633
Fnu4HI GCNGC 8 cut(s) 24, 392, 665, 690, 713, 757, 790, 801
FokI GGATG 2 cut(s) 442, 877
Fsp4HI GCNGC 8 cut(s) 24, 392, 665, 690, 713, 757, 790, 801
FspBI CTAG 6 cut(s) 144, 170, 273, 813, 861, 990
GlaI GCGC 3 cut(s) 289, 360, 698
GluI GCNGC 8 cut(s) 24, 392, 665, 690, 713, 757, 790, 801
GsuI CTGGAG 1 cut(s) 1082
HaeII RGCGCY 1 cut(s) 362
HaeIII GGCC 4 cut(s) 532, 664, 712, 1135
HapII CCGG 4 cut(s) 502, 719, 872, 1136
HgaI GACGC 3 cut(s) 214, 859, 971
HhaI GCGC 3 cut(s) 290, 361, 699
Hin1I GRCGYC 1 cut(s) 359
Hin1II CATG 6 cut(s) 22, 297, 644, 742, 797, 1114
Hin6I GCGC 3 cut(s) 288, 359, 697
HinP1I GCGC 3 cut(s) 288, 359, 697
HinfI GANTC 5 cut(s) 30, 505, 517, 947, 965
HpaII CCGG 4 cut(s) 502, 719, 872, 1136
HphI GGTGA 4 cut(s) 379, 628, 1000, 1126
Hpy166II GTNNAC 2 cut(s) 246, 907
Hpy188I TCNGA 6 cut(s) 256, 421, 443, 525, 781, 952
Hpy188III TCNNGA 2 cut(s) 847, 1061
Hpy8I GTNNAC 2 cut(s) 246, 907
Hpy99I CGWCG 2 cut(s) 921, 987
HpyAV CCTTC 9 cut(s) 61, 175, 187, 221, 349, 481, 776, 1177, 1186
HpyCH4III ACNGT 4 cut(s) 308, 703, 836, 1171
HpyCH4IV ACGT 3 cut(s) 449, 547, 916
HpyCH4V TGCA 9 cut(s) 47, 394, 585, 692, 725, 742, 789, 888, 907
HpyF10VI GCNNNNNNNGC 3 cut(s) 23, 32, 317
HpyF3I CTNAG 1 cut(s) 327
HpySE526I ACGT 3 cut(s) 449, 547, 916
Hsp92I GRCGYC 1 cut(s) 359
Hsp92II CATG 6 cut(s) 22, 297, 644, 742, 797, 1114
HspAI GCGC 3 cut(s) 288, 359, 697
KasI GGCGCC 1 cut(s) 358
KpnI GGTACC 1 cut(s) 1170
Ksp22I TGATCA 2 cut(s) 525, 633
LmnI GCTCC 4 cut(s) 138, 316, 874, 1063
Lsp1109I GCAGC 5 cut(s) 10, 378, 676, 787, 801
LweI GCATC 1 cut(s) 676
MaeI CTAG 6 cut(s) 144, 170, 273, 813, 861, 990
MaeII ACGT 3 cut(s) 449, 547, 916
MflI RGATCY 3 cut(s) 73, 256, 416
MhlI GDGCHC 4 cut(s) 313, 659, 834, 909
MluCI AATT 2 cut(s) 587, 1031
Mly113I GGCGCC 1 cut(s) 359
MlyI GAGTC 2 cut(s) 24, 956
MmeI TCCRAC 2 cut(s) 106, 625
MseI TTAA 3 cut(s) 12, 303, 971
MspA1I CMGCKG 1 cut(s) 756
MspI CCGG 4 cut(s) 502, 719, 872, 1136
MspR9I CCNGG 3 cut(s) 190, 872, 1107
Mva1269I GAATGC 1 cut(s) 399
MvaI CCWGG 2 cut(s) 190, 1107
MwoI GCNNNNNNNGC 3 cut(s) 23, 32, 317
NarI GGCGCC 1 cut(s) 359
NciI CCSGG 1 cut(s) 872
NcoI CCATGG 2 cut(s) 18, 293
NlaIII CATG 6 cut(s) 22, 297, 644, 742, 797, 1114
NlaIV GGNNCC 4 cut(s) 360, 663, 1065, 1168
PaqCI CACCTGC 1 cut(s) 415
PcsI WCGNNNNNNNCGW 1 cut(s) 665
PctI GAATGC 1 cut(s) 399
PfeI GAWTC 3 cut(s) 505, 517, 965
PfoI TCCNGGA 2 cut(s) 188, 870
PinAI ACCGGT 1 cut(s) 718
PkrI GCNGC 8 cut(s) 25, 393, 666, 691, 714, 758, 791, 802
PleI GAGTC 2 cut(s) 24, 955
PluTI GGCGCC 1 cut(s) 362
PpsI GAGTC 2 cut(s) 24, 955
Psp1406I AACGTT 1 cut(s) 547
Psp6I CCWGG 2 cut(s) 188, 1105
PspGI CCWGG 2 cut(s) 188, 1105
PspN4I GGNNCC 4 cut(s) 360, 663, 1065, 1168
PspPI GGNCC 3 cut(s) 157, 662, 710
PstI CTGCAG 2 cut(s) 396, 694
PsuI RGATCY 3 cut(s) 73, 256, 416
RsaI GTAC 2 cut(s) 500, 1168
RsaNI GTAC 2 cut(s) 499, 1167
SaqAI TTAA 3 cut(s) 12, 303, 971
SatI GCNGC 8 cut(s) 24, 392, 665, 690, 713, 757, 790, 801
Sau96I GGNCC 3 cut(s) 157, 662, 710
SchI GAGTC 2 cut(s) 24, 956
ScrFI CCNGG 3 cut(s) 190, 872, 1107
SduI GDGCHC 4 cut(s) 313, 659, 834, 909
SfaNI GCATC 1 cut(s) 676
SfcI CTRYAG 3 cut(s) 261, 392, 690
SfoI GGCGCC 1 cut(s) 360
SinI GGWCC 1 cut(s) 157
Sse9I AATT 2 cut(s) 587, 1031
SsiI CCGC 4 cut(s) 665, 713, 756, 1213
SspDI GGCGCC 1 cut(s) 358
SspI AATATT 1 cut(s) 899
SspMI CTAG 6 cut(s) 144, 170, 273, 813, 861, 990
StyD4I CCNGG 3 cut(s) 188, 870, 1105
StyI CCWWGG 6 cut(s) 18, 169, 293, 812, 860, 989
TaaI ACNGT 4 cut(s) 308, 703, 836, 1171
TaiI ACGT 3 cut(s) 452, 550, 919
TaqI TCGA 1 cut(s) 181
TaqII GACCGA 1 cut(s) 282
TasI AATT 2 cut(s) 587, 1031
TauI GCSGC 3 cut(s) 667, 715, 759
TfiI GAWTC 3 cut(s) 505, 517, 965
Tru1I TTAA 3 cut(s) 12, 303, 971
Tru9I TTAA 3 cut(s) 12, 303, 971
TscAI CASTG 2 cut(s) 54, 1095
TseI GCWGC 5 cut(s) 23, 391, 689, 789, 800
TspDTI ATGAA 3 cut(s) 126, 810, 1196
TspGWI ACGGA 2 cut(s) 68, 149
TspRI CASTG 2 cut(s) 54, 1095
VneI GTGCAC 1 cut(s) 905
VpaK11BI GGWCC 1 cut(s) 157
XapI RAATTY 1 cut(s) 587
XmaJI CCTAGG 4 cut(s) 169, 812, 860, 989
XspI CTAG 6 cut(s) 144, 170, 273, 813, 861, 990
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.