Rmu_ssc0000016.1_g000002

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000016.1
OG0000187
Physical Location & Seq
Forward (+)
15277 .. 16488
1212 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000016.1_g000002.1.cds

Sequence Viewer

Length: 948 bp
atgagttccgttgatgccatggctgcccgactcgcctcctctcctagggagttcaaggtccgttccttcctaggtatgtttcgatctgcctggagggtcaatgggacgttgcaagttgaagaagctgaaggaggtagggttttgttcactttttcagatcctacagaccgagctagggtttggaggggcgcaccatggggttttaaccgtgctcctgtggctttggctgagtatgatggggttatgccaattgagaaggtgccattggtgaaatcctcttattggatcacgctgcagggtattccacatgcgtttagatctgaaagggtgatgacgatgatcggatatacgttggtagactttcaggagattgataagcaggggaagaaggttggcaagtaccggattcgggttgagattcctctgatcaggccattgtcctttcaacgttggtattgggtggaggacacggtggagtttctatgcaaattcatgtatgataagttgtttgggaggtgtggagtgtgtgggttgatcacccatgttggactgccgtgctcggggcagccgttgaaagaagaagatgatgctgcagagcgcacgatattaaggccgccgccggtggcgcaaggttgcagccatgaagctgcattcaatcctagggtttctttcaatgggcacagtttgatcttcaaaactcaactccctaggatgatcccggagcacctcctgtgcaatcctacatatttggtgcaaaaaccacgtcgtaaggtaaggattagagagatagatgagtctgatgccggtaccgcggcaaagatgaaggacttgaaggtagatgatgttaggaagcggctgtttgctaagaagagtctgttgtctaacctgaatggtgcagatgctactgcaagctctaatccgaaaggaaaggagctagctgtggcatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

315

Amino Acids

35.55

Weight (kDa)

9.54

Isoelectric Point (pI)

33.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000187)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20170 FvH4_4g06831
rosa_chinensis RchiOBHm_Chr1g0321991 RchiOBHm_Chr2g0161811
rosa_laevigata RLG00000015375 RLG00000018377
rosa_multiflora Rmu_co8011754.1_g000001 Rmu_co8019986.1_g000001 Rmu_co8067766.1_g000001 Rmu_co8156128.1_g000001 Rmu_co8219154.1_g000003 Rmu_co8297235.1_g000001 Rmu_co8345223.1_g000001 Rmu_co8364775.1_g000001 Rmu_co8465075.1_g000001 Rmu_sc0000007.1_g000002 Rmu_sc0000054.1_g000015 Rmu_sc0000054.1_g000023 Rmu_sc0000145.1_g000010 Rmu_sc0000166.1_g000006 Rmu_sc0000218.1_g000012 Rmu_sc0000339.1_g000008 Rmu_sc0000342.1_g000015 Rmu_sc0000464.1_g000008 Rmu_sc0000620.1_g000003 Rmu_sc0000638.1_g000017 Rmu_sc0000890.1_g000007 Rmu_sc0000894.1_g000024 Rmu_sc0000909.1_g000010 Rmu_sc0000928.1_g000020 Rmu_sc0000977.1_g000007 Rmu_sc0001022.1_g000003 Rmu_sc0001035.1_g000037 Rmu_sc0001060.1_g000008 Rmu_sc0001168.1_g000005 Rmu_sc0001173.1_g000022 Rmu_sc0001179.1_g000016 Rmu_sc0001408.1_g000003 Rmu_sc0001455.1_g000005 Rmu_sc0001484.1_g000008 Rmu_sc0001585.1_g000010 Rmu_sc0001702.1_g000030 Rmu_sc0001755.1_g000063 Rmu_sc0001903.1_g000009 Rmu_sc0002099.1_g000001 Rmu_sc0002142.1_g000012 Rmu_sc0002158.1_g000014 Rmu_sc0002307.1_g000009 Rmu_sc0002358.1_g000013 Rmu_sc0002421.1_g000002 Rmu_sc0002426.1_g000003 Rmu_sc0002438.1_g000001 Rmu_sc0002461.1_g000001 Rmu_sc0002508.1_g000003 Rmu_sc0002532.1_g000056 Rmu_sc0002583.1_g000002 Rmu_sc0002927.1_g000033 Rmu_sc0003033.1_g000040 Rmu_sc0003271.1_g000006 Rmu_sc0003381.1_g000006 Rmu_sc0003507.1_g000007 Rmu_sc0003578.1_g000003 Rmu_sc0003693.1_g000004 Rmu_sc0003693.1_g000005 Rmu_sc0003704.1_g000003 Rmu_sc0003840.1_g000002 Rmu_sc0004084.1_g000026 Rmu_sc0004193.1_g000007 Rmu_sc0004234.1_g000033 Rmu_sc0004235.1_g000025 Rmu_sc0004435.1_g000006 Rmu_sc0004727.1_g000003 Rmu_sc0004741.1_g000001 Rmu_sc0004926.1_g000004 Rmu_sc0005365.1_g000001 Rmu_sc0005392.1_g000007 Rmu_sc0005415.1_g000001 Rmu_sc0005539.1_g000007 Rmu_sc0005708.1_g000017 Rmu_sc0006317.1_g000007 Rmu_sc0006453.1_g000054 Rmu_sc0006536.1_g000004 Rmu_sc0006740.1_g000022 Rmu_sc0006763.1_g000012 Rmu_sc0007115.1_g000002 Rmu_sc0007115.1_g000010 Rmu_sc0007129.1_g000017 Rmu_sc0007131.1_g000010 Rmu_sc0008373.1_g000008 Rmu_sc0009005.1_g000008 Rmu_sc0009252.1_g000007 Rmu_sc0009599.1_g000022 Rmu_sc0009785.1_g000027 Rmu_sc0009891.1_g000003 Rmu_sc0010099.1_g000010 Rmu_sc0010266.1_g000008 Rmu_sc0010334.1_g000003 Rmu_sc0010381.1_g000001 Rmu_sc0010496.1_g000003 Rmu_sc0010496.1_g000004 Rmu_sc0010546.1_g000003 Rmu_sc0011482.1_g000006 Rmu_sc0011875.1_g000010 Rmu_sc0011917.1_g000006 Rmu_sc0012293.1_g000004 Rmu_sc0012847.1_g000003 Rmu_sc0013773.1_g000001 Rmu_sc0016060.1_g000003 Rmu_sc0016170.1_g000013 Rmu_sc0016393.1_g000002 Rmu_sc0017589.1_g000001 Rmu_sc0017786.1_g000005 Rmu_sc0018326.1_g000002 Rmu_sc0020760.1_g000001 Rmu_sc0021262.1_g000003 Rmu_sc0023851.1_g000002 Rmu_sc0024044.1_g000001 Rmu_sc0026820.1_g000001 Rmu_sc0032306.1_g000001 Rmu_sc0035666.1_g000001 Rmu_sc0036881.1_g000001 Rmu_sc0037030.1_g000001 Rmu_sc0037158.1_g000001 Rmu_ssc0000016.1_g000002 Rmu_ssc0000044.1_g000012 Rmu_ssc0000044.1_g000014 Rmu_ssc0000050.1_g000064 Rmu_ssc0000064.1_g000022 Rmu_ssc0000154.1_g000037 Rmu_ssc0000178.1_g000013 Rmu_ssc0000217.1_g000022 Rmu_ssc0000392.1_g000004
rosa_roxburghii Rroxscaffold_3G00242000 Rroxscaffold_3G00242530 Rroxscaffold_6G00406010
rosa_rugosa Rorug01G0062000 Rorug02G0224000 Rorug02G0262900 Rorug02G0263000 Rorug02G0358900 Rorug02G0360500 Rorug02G0378500.1 Rorug02G0378600 Rorug02G0394700 Rorug03G0122900 Rorug03G0254600 Rorug03G0254700 Rorug03G0254800 Rorug04G0042200.1 Rorug04G0378100 Rorug05G0053400 Rorug05G0238600 Rorug05G0364500 Rorug05G0562000 Rorug06G0089300 Rorug06G0089400 Rorug06G0145700 Rorug07G0111600 Rorug07G0229500.1 Rorug07G0287600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 806
AccB1I GGYRCC 2 cut(s) 259, 806
AccI GTMKAC 1 cut(s) 357
AccII CGCG 1 cut(s) 812
AciI CCGC 5 cut(s) 614, 617, 810, 812, 853
AclI AACGTT 1 cut(s) 448
AclWI GGATC 3 cut(s) 152, 293, 709
AcsI RAATTY 1 cut(s) 488
AcuI CTGAAG 1 cut(s) 147
AfaI GTAC 2 cut(s) 401, 808
AfiI CCNNNNNNNGG 5 cut(s) 45, 175, 282, 409, 560
AgsI TTSAA 8 cut(s) 55, 119, 446, 574, 655, 673, 694, 832
AjiI CACGTC 1 cut(s) 764
AjnI CCWGG 1 cut(s) 89
AjuI GAANNNNNNNTTGG 2 cut(s) 248, 280
AluBI AGCT 6 cut(s) 125, 173, 647, 912, 934, 938
AluI AGCT 6 cut(s) 125, 173, 647, 912, 934, 938
Alw21I GWGCWC 3 cut(s) 214, 560, 726
AlwI GGATC 3 cut(s) 152, 293, 709
Ama87I CYCGRG 1 cut(s) 559
AoxI GGCC 2 cut(s) 431, 611
ApeKI GCWGC 6 cut(s) 23, 292, 565, 590, 636, 647
ApoI RAATTY 1 cut(s) 488
ArsI GACNNNNNNTTYG 2 cut(s) 748, 780
Asp718I GGTACC 1 cut(s) 806
AspA2I CCTAGG 4 cut(s) 44, 70, 659, 707
AspLEI GCGC 3 cut(s) 191, 600, 628
AspS9I GGNCC 1 cut(s) 58
AsuC2I CCSGG 1 cut(s) 719
AsuHPI GGTGA 3 cut(s) 280, 340, 529
AsuNHI GCTAGC 1 cut(s) 934
AvaI CYCGRG 1 cut(s) 559
AvaII GGWCC 1 cut(s) 58
AvrII CCTAGG 4 cut(s) 44, 70, 659, 707
BaeGI GKGCMC 1 cut(s) 681
BanI GGYRCC 2 cut(s) 259, 806
Bbv12I GWGCWC 3 cut(s) 214, 560, 726
BbvI GCAGC 6 cut(s) 10, 279, 577, 577, 634, 648
BccI CCATC 1 cut(s) 230
BceAI ACGGC 2 cut(s) 538, 553
BciT130I CCWGG 1 cut(s) 91
BclI TGATCA 2 cut(s) 426, 534
BcnI CCSGG 1 cut(s) 719
BfaI CTAG 6 cut(s) 45, 71, 174, 660, 708, 935
BfmI CTRYAG 3 cut(s) 162, 293, 591
BglII AGATCT 1 cut(s) 317
BlnI CCTAGG 4 cut(s) 44, 70, 659, 707
Bme1390I CCNGG 2 cut(s) 91, 719
Bme18I GGWCC 1 cut(s) 58
BmeT110I CYCGRG 1 cut(s) 559
BmgBI CACGTC 1 cut(s) 764
BmgT120I GGNCC 1 cut(s) 58
BmiI GGNNCC 2 cut(s) 261, 808
BmrFI CCNGG 2 cut(s) 91, 719
BmsI GCATC 4 cut(s) 4, 577, 790, 889
BmtI GCTAGC 1 cut(s) 938
BpmI CTGGAG 1 cut(s) 112
BpuMI CCSGG 1 cut(s) 719
BsaJI CCNNGG 7 cut(s) 18, 44, 70, 194, 659, 707, 810
BsaWI WCCGGW 1 cut(s) 402
BsaXI ACNNNNNCTCC 2 cut(s) 123, 153
Bsc4I CCNNNNNNNGG 5 cut(s) 45, 175, 282, 409, 560
Bse118I RCCGGY 2 cut(s) 619, 803
BseBI CCWGG 1 cut(s) 91
BseDI CCNNGG 7 cut(s) 18, 44, 70, 194, 659, 707, 810
BseGI GGATG 1 cut(s) 717
BseLI CCNNNNNNNGG 5 cut(s) 45, 175, 282, 409, 560
BseMII CTCAG 1 cut(s) 219
BseRI GAGGAG 1 cut(s) 28
BseSI GKGCMC 1 cut(s) 681
BseXI GCAGC 6 cut(s) 10, 279, 577, 577, 634, 648
BsgI GTGCAG 1 cut(s) 915
Bsh1236I CGCG 1 cut(s) 812
BshFI GGCC 2 cut(s) 433, 613
BshNI GGYRCC 2 cut(s) 259, 806
BsiHKAI GWGCWC 3 cut(s) 214, 560, 726
BsiHKCI CYCGRG 1 cut(s) 559
BsiSI CCGG 4 cut(s) 403, 620, 719, 804
BslFI GGGAC 1 cut(s) 118
BslI CCNNNNNNNGG 5 cut(s) 45, 175, 282, 409, 560
BsmFI GGGAC 1 cut(s) 118
BsmI GAATGC 1 cut(s) 650
BsnI GGCC 2 cut(s) 433, 613
BsoBI CYCGRG 1 cut(s) 559
Bsp1286I GDGCHC 4 cut(s) 214, 560, 681, 726
Bsp143I GATC 9 cut(s) 83, 157, 285, 317, 339, 426, 534, 687, 714
Bsp19I CCATGG 2 cut(s) 18, 194
BspACI CCGC 5 cut(s) 614, 617, 810, 812, 853
BspANI GGCC 2 cut(s) 433, 613
BspCNI CTCAG 1 cut(s) 220
BspFNI CGCG 1 cut(s) 812
BspLI GGNNCC 2 cut(s) 261, 808
BspMAI CTGCAG 2 cut(s) 297, 595
BspOI GCTAGC 1 cut(s) 938
BspPI GGATC 3 cut(s) 152, 293, 709
BspT107I GGYRCC 2 cut(s) 259, 806
BsrFI RCCGGY 2 cut(s) 619, 803
BssAI RCCGGY 2 cut(s) 619, 803
BssECI CCNNGG 7 cut(s) 18, 44, 70, 194, 659, 707, 810
BssMI GATC 9 cut(s) 83, 157, 285, 317, 339, 426, 534, 687, 714
BssT1I CCWWGG 6 cut(s) 18, 44, 70, 194, 659, 707
Bst2UI CCWGG 1 cut(s) 91
Bst4CI ACNGT 3 cut(s) 209, 472, 683
Bst6I CTCTTC 1 cut(s) 863
BstC8I GCNNGC 2 cut(s) 910, 936
BstDEI CTNAG 2 cut(s) 228, 864
BstDSI CCRYGG 3 cut(s) 18, 194, 810
BstENI CCTNNNNNAGG 1 cut(s) 43
BstF5I GGATG 1 cut(s) 717
BstFNI CGCG 1 cut(s) 812
BstHHI GCGC 3 cut(s) 191, 600, 628
BstKTI GATC 9 cut(s) 86, 160, 288, 320, 342, 429, 537, 690, 717
BstMBI GATC 9 cut(s) 83, 157, 285, 317, 339, 426, 534, 687, 714
BstMWI GCNNNNNNNGC 5 cut(s) 23, 32, 218, 625, 809
BstNI CCWGG 1 cut(s) 91
BstNSI RCATGY 1 cut(s) 311
BstSCI CCNGG 2 cut(s) 89, 717
BstSFI CTRYAG 3 cut(s) 162, 293, 591
BstSLI GKGCMC 1 cut(s) 681
BstUI CGCG 1 cut(s) 812
BstV1I GCAGC 6 cut(s) 10, 279, 577, 577, 634, 648
BstX2I RGATCY 2 cut(s) 157, 317
BstYI RGATCY 2 cut(s) 157, 317
BsuRI GGCC 2 cut(s) 433, 613
BtgI CCRYGG 3 cut(s) 18, 194, 810
BtrI CACGTC 1 cut(s) 764
BtsCI GGATG 1 cut(s) 717
Cac8I GCNNGC 2 cut(s) 910, 936
CfoI GCGC 3 cut(s) 191, 600, 628
Cfr10I RCCGGY 2 cut(s) 619, 803
Cfr13I GGNCC 1 cut(s) 58
Cfr42I CCGCGG 1 cut(s) 813
Csp6I GTAC 2 cut(s) 400, 807
CviAII CATG 6 cut(s) 19, 195, 308, 493, 542, 641
CviQI GTAC 2 cut(s) 400, 807
DdeI CTNAG 2 cut(s) 228, 864
DpnI GATC 9 cut(s) 85, 159, 287, 319, 341, 428, 536, 689, 716
DpnII GATC 9 cut(s) 83, 157, 285, 317, 339, 426, 534, 687, 714
Eam1104I CTCTTC 1 cut(s) 863
EarI CTCTTC 1 cut(s) 863
Eco130I CCWWGG 6 cut(s) 18, 44, 70, 194, 659, 707
Eco47I GGWCC 1 cut(s) 58
Eco57I CTGAAG 1 cut(s) 147
Eco88I CYCGRG 1 cut(s) 559
EcoNI CCTNNNNNAGG 1 cut(s) 43
EcoRII CCWGG 1 cut(s) 89
EcoT14I CCWWGG 6 cut(s) 18, 44, 70, 194, 659, 707
ErhI CCWWGG 6 cut(s) 18, 44, 70, 194, 659, 707
FaeI CATG 6 cut(s) 22, 198, 311, 496, 545, 644
FaqI GGGAC 1 cut(s) 118
FatI CATG 6 cut(s) 18, 194, 307, 492, 541, 640
FbaI TGATCA 2 cut(s) 426, 534
FblI GTMKAC 1 cut(s) 357
FokI GGATG 1 cut(s) 724
FspBI CTAG 6 cut(s) 45, 71, 174, 660, 708, 935
GlaI GCGC 3 cut(s) 190, 599, 627
GsuI CTGGAG 1 cut(s) 112
HaeIII GGCC 2 cut(s) 433, 613
HapII CCGG 4 cut(s) 403, 620, 719, 804
HhaI GCGC 3 cut(s) 191, 600, 628
Hin1II CATG 6 cut(s) 22, 198, 311, 496, 545, 644
Hin6I GCGC 3 cut(s) 189, 598, 626
HinP1I GCGC 3 cut(s) 189, 598, 626
HinfI GANTC 5 cut(s) 30, 406, 418, 794, 871
HpaII CCGG 4 cut(s) 403, 620, 719, 804
HphI GGTGA 3 cut(s) 280, 340, 529
Hpy166II GTNNAC 2 cut(s) 147, 358
Hpy188I TCNGA 6 cut(s) 157, 322, 344, 426, 799, 921
Hpy188III TCNNGA 1 cut(s) 365
Hpy8I GTNNAC 2 cut(s) 147, 358
Hpy99I CGWCG 1 cut(s) 768
HpyAV CCTTC 6 cut(s) 76, 122, 250, 382, 817, 826
HpyCH4III ACNGT 3 cut(s) 209, 472, 683
HpyCH4IV ACGT 4 cut(s) 107, 350, 448, 763
HpyF10VI GCNNNNNNNGC 5 cut(s) 23, 32, 218, 625, 809
HpyF3I CTNAG 2 cut(s) 228, 864
HpySE526I ACGT 4 cut(s) 107, 350, 448, 763
Hsp92II CATG 6 cut(s) 22, 198, 311, 496, 545, 644
HspAI GCGC 3 cut(s) 189, 598, 626
KpnI GGTACC 1 cut(s) 810
Ksp22I TGATCA 2 cut(s) 426, 534
KspI CCGCGG 1 cut(s) 813
Kzo9I GATC 9 cut(s) 83, 157, 285, 317, 339, 426, 534, 687, 714
LmnI GCTCC 3 cut(s) 217, 721, 931
Lsp1109I GCAGC 6 cut(s) 10, 279, 577, 577, 634, 648
LweI GCATC 4 cut(s) 4, 577, 790, 889
MaeI CTAG 6 cut(s) 45, 71, 174, 660, 708, 935
MaeII ACGT 4 cut(s) 107, 350, 448, 763
MalI GATC 9 cut(s) 85, 159, 287, 319, 341, 428, 536, 689, 716
MboI GATC 9 cut(s) 83, 157, 285, 317, 339, 426, 534, 687, 714
MboII GAAGA 6 cut(s) 131, 397, 590, 593, 682, 880
MfeI CAATTG 1 cut(s) 249
MflI RGATCY 2 cut(s) 157, 317
MhlI GDGCHC 4 cut(s) 214, 560, 681, 726
MluCI AATT 2 cut(s) 249, 488
MlyI GAGTC 3 cut(s) 24, 803, 880
MmeI TCCRAC 1 cut(s) 526
MseI TTAA 2 cut(s) 204, 608
MspA1I CMGCKG 1 cut(s) 812
MspI CCGG 4 cut(s) 403, 620, 719, 804
MspR9I CCNGG 2 cut(s) 91, 719
MunI CAATTG 1 cut(s) 249
Mva1269I GAATGC 1 cut(s) 650
MvaI CCWGG 1 cut(s) 91
MvnI CGCG 1 cut(s) 812
MwoI GCNNNNNNNGC 5 cut(s) 23, 32, 218, 625, 809
NciI CCSGG 1 cut(s) 719
NcoI CCATGG 2 cut(s) 18, 194
NdeII GATC 9 cut(s) 83, 157, 285, 317, 339, 426, 534, 687, 714
NheI GCTAGC 1 cut(s) 934
NlaIII CATG 6 cut(s) 22, 198, 311, 496, 545, 644
NlaIV GGNNCC 2 cut(s) 261, 808
NspI RCATGY 1 cut(s) 311
PcsI WCGNNNNNNNCGW 1 cut(s) 566
PctI GAATGC 1 cut(s) 650
PfeI GAWTC 2 cut(s) 406, 418
PfoI TCCNGGA 1 cut(s) 717
PleI GAGTC 3 cut(s) 24, 802, 879
PpsI GAGTC 3 cut(s) 24, 802, 879
Psp1406I AACGTT 1 cut(s) 448
Psp6I CCWGG 1 cut(s) 89
PspGI CCWGG 1 cut(s) 89
PspN4I GGNNCC 2 cut(s) 261, 808
PspPI GGNCC 1 cut(s) 58
PstI CTGCAG 2 cut(s) 297, 595
PsuI RGATCY 2 cut(s) 157, 317
RsaI GTAC 2 cut(s) 401, 808
RsaNI GTAC 2 cut(s) 400, 807
SacII CCGCGG 1 cut(s) 813
SaqAI TTAA 2 cut(s) 204, 608
Sau3AI GATC 9 cut(s) 83, 157, 285, 317, 339, 426, 534, 687, 714
Sau96I GGNCC 1 cut(s) 58
SchI GAGTC 3 cut(s) 24, 803, 880
ScrFI CCNGG 2 cut(s) 91, 719
SduI GDGCHC 4 cut(s) 214, 560, 681, 726
SfaNI GCATC 4 cut(s) 4, 577, 790, 889
SfcI CTRYAG 3 cut(s) 162, 293, 591
Sfr303I CCGCGG 1 cut(s) 813
SgrAI CRCCGGYG 1 cut(s) 619
SgrBI CCGCGG 1 cut(s) 813
SinI GGWCC 1 cut(s) 58
Sse9I AATT 2 cut(s) 249, 488
SsiI CCGC 5 cut(s) 614, 617, 810, 812, 853
SspMI CTAG 6 cut(s) 45, 71, 174, 660, 708, 935
StyD4I CCNGG 2 cut(s) 89, 717
StyI CCWWGG 6 cut(s) 18, 44, 70, 194, 659, 707
TaaI ACNGT 3 cut(s) 209, 472, 683
TaiI ACGT 4 cut(s) 110, 353, 451, 766
TaqI TCGA 1 cut(s) 82
TaqII GACCGA 1 cut(s) 183
TasI AATT 2 cut(s) 249, 488
TauI GCSGC 4 cut(s) 616, 619, 815, 856
TfiI GAWTC 2 cut(s) 406, 418
Tru1I TTAA 2 cut(s) 204, 608
Tru9I TTAA 2 cut(s) 204, 608
TseI GCWGC 6 cut(s) 23, 292, 565, 590, 636, 647
TspDTI ATGAA 3 cut(s) 481, 657, 836
TspGWI ACGGA 1 cut(s) 50
VpaK11BI GGWCC 1 cut(s) 58
XagI CCTNNNNNAGG 1 cut(s) 43
XapI RAATTY 1 cut(s) 488
XceI RCATGY 1 cut(s) 311
XmaJI CCTAGG 4 cut(s) 44, 70, 659, 707
XmiI GTMKAC 1 cut(s) 357
XspI CTAG 6 cut(s) 45, 71, 174, 660, 708, 935
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.