ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 295 |
| Acc36I | ACCTGC | 1 cut(s) | 295 |
| AccBSI | CCGCTC | 1 cut(s) | 42 |
| AccI | GTMKAC | 1 cut(s) | 326 |
| AciI | CCGC | 2 cut(s) | 40, 544 |
| AclWI | GGATC | 5 cut(s) | 131, 144, 272, 291, 400 |
| AcsI | RAATTY | 1 cut(s) | 467 |
| AcuI | CTGAAG | 1 cut(s) | 126 |
| AfaI | GTAC | 1 cut(s) | 240 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 261 |
| AgsI | TTSAA | 3 cut(s) | 34, 98, 425 |
| AjnI | CCWGG | 1 cut(s) | 23 |
| AluBI | AGCT | 1 cut(s) | 370 |
| AluI | AGCT | 1 cut(s) | 370 |
| Alw21I | GWGCWC | 2 cut(s) | 193, 535 |
| AlwI | GGATC | 5 cut(s) | 131, 144, 272, 291, 400 |
| ApoI | RAATTY | 1 cut(s) | 467 |
| AspA2I | CCTAGG | 1 cut(s) | 49 |
| AspLEI | GCGC | 1 cut(s) | 172 |
| AspS9I | GGNCC | 1 cut(s) | 37 |
| AsuC2I | CCSGG | 1 cut(s) | 389 |
| AsuHPI | GGTGA | 2 cut(s) | 259, 319 |
| AvaII | GGWCC | 1 cut(s) | 37 |
| AvrII | CCTAGG | 1 cut(s) | 49 |
| BamHI | GGATCC | 1 cut(s) | 136 |
| Bbv12I | GWGCWC | 2 cut(s) | 193, 535 |
| BccI | CCATC | 2 cut(s) | 209, 423 |
| BceAI | ACGGC | 1 cut(s) | 513 |
| BciT130I | CCWGG | 1 cut(s) | 25 |
| BciVI | GTATCC | 2 cut(s) | 395, 439 |
| BcnI | CCSGG | 1 cut(s) | 389 |
| BfaI | CTAG | 2 cut(s) | 50, 536 |
| BfmI | CTRYAG | 1 cut(s) | 141 |
| BfuAI | ACCTGC | 1 cut(s) | 295 |
| BfuI | GTATCC | 2 cut(s) | 395, 439 |
| BisI | GCNGC | 1 cut(s) | 544 |
| BlnI | CCTAGG | 1 cut(s) | 49 |
| BlsI | GCNGC | 1 cut(s) | 545 |
| Bme1390I | CCNGG | 2 cut(s) | 25, 389 |
| Bme18I | GGWCC | 1 cut(s) | 37 |
| BmgT120I | GGNCC | 1 cut(s) | 37 |
| BmiI | GGNNCC | 2 cut(s) | 85, 138 |
| BmrFI | CCNGG | 2 cut(s) | 25, 389 |
| BpuMI | CCSGG | 1 cut(s) | 389 |
| BsaJI | CCNNGG | 4 cut(s) | 24, 49, 173, 330 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 261 |
| Bse1I | ACTGG | 1 cut(s) | 525 |
| BseBI | CCWGG | 1 cut(s) | 25 |
| BseDI | CCNNGG | 4 cut(s) | 24, 49, 173, 330 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 261 |
| BseMII | CTCAG | 1 cut(s) | 198 |
| BseNI | ACTGG | 1 cut(s) | 525 |
| BsiHKAI | GWGCWC | 2 cut(s) | 193, 535 |
| BsiSI | CCGG | 1 cut(s) | 388 |
| BslFI | GGGAC | 1 cut(s) | 350 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 261 |
| BsmFI | GGGAC | 1 cut(s) | 350 |
| Bsp1286I | GDGCHC | 2 cut(s) | 193, 535 |
| Bsp143I | GATC | 5 cut(s) | 136, 145, 264, 296, 405 |
| Bsp19I | CCATGG | 1 cut(s) | 173 |
| BspACI | CCGC | 2 cut(s) | 40, 544 |
| BspCNI | CTCAG | 1 cut(s) | 199 |
| BspLI | GGNNCC | 2 cut(s) | 85, 138 |
| BspMI | ACCTGC | 1 cut(s) | 295 |
| BspPI | GGATC | 5 cut(s) | 131, 144, 272, 291, 400 |
| BsrBI | CCGCTC | 1 cut(s) | 42 |
| BsrI | ACTGG | 1 cut(s) | 525 |
| BssECI | CCNNGG | 4 cut(s) | 24, 49, 173, 330 |
| BssMI | GATC | 5 cut(s) | 136, 145, 264, 296, 405 |
| BssNAI | GTATAC | 1 cut(s) | 327 |
| BssT1I | CCWWGG | 3 cut(s) | 49, 173, 330 |
| Bst1107I | GTATAC | 1 cut(s) | 327 |
| Bst2UI | CCWGG | 1 cut(s) | 25 |
| Bst4CI | ACNGT | 2 cut(s) | 188, 451 |
| Bst6I | CTCTTC | 1 cut(s) | 93 |
| BstC8I | GCNNGC | 1 cut(s) | 526 |
| BstDEI | CTNAG | 1 cut(s) | 207 |
| BstDSI | CCRYGG | 1 cut(s) | 173 |
| BstHHI | GCGC | 1 cut(s) | 172 |
| BstKTI | GATC | 5 cut(s) | 139, 148, 267, 299, 408 |
| BstMBI | GATC | 5 cut(s) | 136, 145, 264, 296, 405 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 197, 530 |
| BstNI | CCWGG | 1 cut(s) | 25 |
| BstSCI | CCNGG | 2 cut(s) | 23, 387 |
| BstSFI | CTRYAG | 1 cut(s) | 141 |
| BstX2I | RGATCY | 2 cut(s) | 136, 296 |
| BstYI | RGATCY | 2 cut(s) | 136, 296 |
| BstZ17I | GTATAC | 1 cut(s) | 327 |
| BsuI | GTATCC | 2 cut(s) | 395, 439 |
| BtgI | CCRYGG | 1 cut(s) | 173 |
| BtsIMutI | CAGTG | 1 cut(s) | 518 |
| BveI | ACCTGC | 1 cut(s) | 295 |
| Cac8I | GCNNGC | 1 cut(s) | 526 |
| CfoI | GCGC | 1 cut(s) | 172 |
| Cfr13I | GGNCC | 1 cut(s) | 37 |
| Csp6I | GTAC | 1 cut(s) | 239 |
| CviAII | CATG | 3 cut(s) | 69, 174, 194 |
| CviJI | RGCY | 5 cut(s) | 104, 200, 370, 510, 524 |
| CviKI_1 | RGCY | 5 cut(s) | 104, 200, 370, 510, 524 |
| CviQI | GTAC | 1 cut(s) | 239 |
| DdeI | CTNAG | 1 cut(s) | 207 |
| DpnI | GATC | 5 cut(s) | 138, 147, 266, 298, 407 |
| DpnII | GATC | 5 cut(s) | 136, 145, 264, 296, 405 |
| Eam1104I | CTCTTC | 1 cut(s) | 93 |
| EarI | CTCTTC | 1 cut(s) | 93 |
| Eco130I | CCWWGG | 3 cut(s) | 49, 173, 330 |
| Eco47I | GGWCC | 1 cut(s) | 37 |
| Eco57I | CTGAAG | 1 cut(s) | 126 |
| EcoRII | CCWGG | 1 cut(s) | 23 |
| EcoT14I | CCWWGG | 3 cut(s) | 49, 173, 330 |
| EcoT22I | ATGCAT | 1 cut(s) | 70 |
| ErhI | CCWWGG | 3 cut(s) | 49, 173, 330 |
| FaeI | CATG | 3 cut(s) | 72, 177, 197 |
| FaiI | YATR | 9 cut(s) | 56, 66, 70, 175, 195, 213, 224, 327, 477 |
| FaqI | GGGAC | 1 cut(s) | 350 |
| FatI | CATG | 3 cut(s) | 68, 173, 193 |
| FblI | GTMKAC | 1 cut(s) | 326 |
| Fnu4HI | GCNGC | 1 cut(s) | 544 |
| Fsp4HI | GCNGC | 1 cut(s) | 544 |
| FspBI | CTAG | 2 cut(s) | 50, 536 |
| GlaI | GCGC | 1 cut(s) | 171 |
| GluI | GCNGC | 1 cut(s) | 544 |
| HapII | CCGG | 1 cut(s) | 388 |
| HhaI | GCGC | 1 cut(s) | 172 |
| Hin1II | CATG | 3 cut(s) | 72, 177, 197 |
| Hin6I | GCGC | 1 cut(s) | 170 |
| HinP1I | GCGC | 1 cut(s) | 170 |
| HindIII | AAGCTT | 1 cut(s) | 368 |
| HinfI | GANTC | 1 cut(s) | 397 |
| HpaII | CCGG | 1 cut(s) | 388 |
| HphI | GGTGA | 2 cut(s) | 259, 319 |
| Hpy166II | GTNNAC | 2 cut(s) | 126, 327 |
| Hpy188I | TCNGA | 4 cut(s) | 136, 296, 301, 410 |
| Hpy188III | TCNNGA | 1 cut(s) | 344 |
| Hpy8I | GTNNAC | 2 cut(s) | 126, 327 |
| HpyAV | CCTTC | 3 cut(s) | 55, 101, 229 |
| HpyCH4III | ACNGT | 2 cut(s) | 188, 451 |
| HpyCH4IV | ACGT | 1 cut(s) | 269 |
| HpyCH4V | TGCA | 3 cut(s) | 68, 91, 465 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 197, 530 |
| HpyF3I | CTNAG | 1 cut(s) | 207 |
| HpySE526I | ACGT | 1 cut(s) | 269 |
| Hsp92II | CATG | 3 cut(s) | 72, 177, 197 |
| HspAI | GCGC | 1 cut(s) | 170 |
| Kzo9I | GATC | 5 cut(s) | 136, 145, 264, 296, 405 |
| LmnI | GCTCC | 1 cut(s) | 47 |
| LpnPI | CCDG | 7 cut(s) | 10, 37, 230, 300, 329, 401, 506 |
| MaeI | CTAG | 2 cut(s) | 50, 536 |
| MaeII | ACGT | 1 cut(s) | 269 |
| MaeIII | GTNAC | 2 cut(s) | 270, 514 |
| MalI | GATC | 5 cut(s) | 138, 147, 266, 298, 407 |
| MbiI | CCGCTC | 1 cut(s) | 42 |
| MboI | GATC | 5 cut(s) | 136, 145, 264, 296, 405 |
| MboII | GAAGA | 2 cut(s) | 110, 504 |
| MfeI | CAATTG | 1 cut(s) | 228 |
| MflI | RGATCY | 2 cut(s) | 136, 296 |
| MhlI | GDGCHC | 2 cut(s) | 193, 535 |
| MluCI | AATT | 2 cut(s) | 228, 467 |
| MmeI | TCCRAC | 1 cut(s) | 433 |
| MnlI | CCTC | 5 cut(s) | 66, 94, 156, 265, 436 |
| Mph1103I | ATGCAT | 1 cut(s) | 70 |
| MseI | TTAA | 2 cut(s) | 183, 471 |
| MspA1I | CMGCKG | 1 cut(s) | 546 |
| MspI | CCGG | 1 cut(s) | 388 |
| MspR9I | CCNGG | 2 cut(s) | 25, 389 |
| MunI | CAATTG | 1 cut(s) | 228 |
| MvaI | CCWGG | 1 cut(s) | 25 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 197, 530 |
| NciI | CCSGG | 1 cut(s) | 389 |
| NcoI | CCATGG | 1 cut(s) | 173 |
| NdeII | GATC | 5 cut(s) | 136, 145, 264, 296, 405 |
| NlaIII | CATG | 3 cut(s) | 72, 177, 197 |
| NlaIV | GGNNCC | 2 cut(s) | 85, 138 |
| NmuCI | GTSAC | 1 cut(s) | 514 |
| NsiI | ATGCAT | 1 cut(s) | 70 |
| PaqCI | CACCTGC | 1 cut(s) | 295 |
| PfeI | GAWTC | 1 cut(s) | 397 |
| PkrI | GCNGC | 1 cut(s) | 545 |
| Psp6I | CCWGG | 1 cut(s) | 23 |
| PspGI | CCWGG | 1 cut(s) | 23 |
| PspN4I | GGNNCC | 2 cut(s) | 85, 138 |
| PspPI | GGNCC | 1 cut(s) | 37 |
| PsuI | RGATCY | 2 cut(s) | 136, 296 |
| RsaI | GTAC | 1 cut(s) | 240 |
| RsaNI | GTAC | 1 cut(s) | 239 |
| SaqAI | TTAA | 2 cut(s) | 183, 471 |
| SatI | GCNGC | 1 cut(s) | 544 |
| Sau3AI | GATC | 5 cut(s) | 136, 145, 264, 296, 405 |
| Sau96I | GGNCC | 1 cut(s) | 37 |
| ScrFI | CCNGG | 2 cut(s) | 25, 389 |
| SduI | GDGCHC | 2 cut(s) | 193, 535 |
| SfcI | CTRYAG | 1 cut(s) | 141 |
| SinI | GGWCC | 1 cut(s) | 37 |
| Sse9I | AATT | 2 cut(s) | 228, 467 |
| SsiI | CCGC | 2 cut(s) | 40, 544 |
| SspMI | CTAG | 2 cut(s) | 50, 536 |
| StyD4I | CCNGG | 2 cut(s) | 23, 387 |
| StyI | CCWWGG | 3 cut(s) | 49, 173, 330 |
| TaaI | ACNGT | 2 cut(s) | 188, 451 |
| TaiI | ACGT | 1 cut(s) | 272 |
| TaqI | TCGA | 1 cut(s) | 61 |
| TasI | AATT | 2 cut(s) | 228, 467 |
| TauI | GCSGC | 1 cut(s) | 546 |
| TfiI | GAWTC | 1 cut(s) | 397 |
| Tru1I | TTAA | 2 cut(s) | 183, 471 |
| Tru9I | TTAA | 2 cut(s) | 183, 471 |
| TscAI | CASTG | 1 cut(s) | 525 |
| TseFI | GTSAC | 1 cut(s) | 514 |
| Tsp45I | GTSAC | 1 cut(s) | 514 |
| TspRI | CASTG | 1 cut(s) | 525 |
| VpaK11BI | GGWCC | 1 cut(s) | 37 |
| XapI | RAATTY | 1 cut(s) | 467 |
| XmaJI | CCTAGG | 1 cut(s) | 49 |
| XmiI | GTMKAC | 1 cut(s) | 326 |
| XspI | CTAG | 2 cut(s) | 50, 536 |
| Zsp2I | ATGCAT | 1 cut(s) | 70 |