Rorug05G0053400

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000187
Physical Location & Seq
Forward (+)
4631695 .. 4632950
1256 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0053400.1

Sequence Viewer

Length: 651 bp
ATGGACCAGATCGAGCACAAGTTAACCGTGCAAGGCCTAAGGCTCCATGTGGCCGACATCGGAACAAGTCATCAACCCTCTTGCCTTTTCCTCATTCTTAACATCATCGATTCACTAACAATCGTGTGTTTCAGGTCCCAATGTGGTCGTCTTCCTACATGGACTCCCAGAAATATGGTACACGTGGCGCCACCAGATGATCGCTTTGGCCCACGCCGGGTTCCGGGCCATTGCGCCCGACTACATACCGCGGATACGGACTCTCCGACCCGCCTGCACAACCCGAGAAGGCCTCCTTCCTTGAACTTGACAATGACCTCCTTGCTATTCTTGATGCCCTTGCCATTCCTAAGGTCTTCCTCATCGGAAAAGATTTATTTGGAGCTTGGCCGGCGTACATATTTGCCGGAACCAGGTGGCAGGGCAGAATCTGATTTTGGACGCCTTGATGCGAAAACAGTTATTCGCAATGTGTACATTCTTTTCTCGAGGAGTGAAATACCAATAGCTGCAGAAAACCAGGAGATCATGGACTTGATGGACTCGTCTATGCCTCATCCCCCTTGGTTCACTGAGGAAGATCTTGAAGCATATGGAAAGTTGTATGAGAAATTTGGTTTCCAAACCGCATTGCAGCCTCCATATAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

216

Amino Acids

24.67

Weight (kDa)

7.09

Isoelectric Point (pI)

66.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000187)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20170 FvH4_4g06831
rosa_chinensis RchiOBHm_Chr1g0321991 RchiOBHm_Chr2g0161811
rosa_laevigata RLG00000015375 RLG00000018377
rosa_multiflora Rmu_co8011754.1_g000001 Rmu_co8019986.1_g000001 Rmu_co8067766.1_g000001 Rmu_co8156128.1_g000001 Rmu_co8219154.1_g000003 Rmu_co8297235.1_g000001 Rmu_co8345223.1_g000001 Rmu_co8364775.1_g000001 Rmu_co8465075.1_g000001 Rmu_sc0000007.1_g000002 Rmu_sc0000054.1_g000015 Rmu_sc0000054.1_g000023 Rmu_sc0000145.1_g000010 Rmu_sc0000166.1_g000006 Rmu_sc0000218.1_g000012 Rmu_sc0000339.1_g000008 Rmu_sc0000342.1_g000015 Rmu_sc0000464.1_g000008 Rmu_sc0000620.1_g000003 Rmu_sc0000638.1_g000017 Rmu_sc0000890.1_g000007 Rmu_sc0000894.1_g000024 Rmu_sc0000909.1_g000010 Rmu_sc0000928.1_g000020 Rmu_sc0000977.1_g000007 Rmu_sc0001022.1_g000003 Rmu_sc0001035.1_g000037 Rmu_sc0001060.1_g000008 Rmu_sc0001168.1_g000005 Rmu_sc0001173.1_g000022 Rmu_sc0001179.1_g000016 Rmu_sc0001408.1_g000003 Rmu_sc0001455.1_g000005 Rmu_sc0001484.1_g000008 Rmu_sc0001585.1_g000010 Rmu_sc0001702.1_g000030 Rmu_sc0001755.1_g000063 Rmu_sc0001903.1_g000009 Rmu_sc0002099.1_g000001 Rmu_sc0002142.1_g000012 Rmu_sc0002158.1_g000014 Rmu_sc0002307.1_g000009 Rmu_sc0002358.1_g000013 Rmu_sc0002421.1_g000002 Rmu_sc0002426.1_g000003 Rmu_sc0002438.1_g000001 Rmu_sc0002461.1_g000001 Rmu_sc0002508.1_g000003 Rmu_sc0002532.1_g000056 Rmu_sc0002583.1_g000002 Rmu_sc0002927.1_g000033 Rmu_sc0003033.1_g000040 Rmu_sc0003271.1_g000006 Rmu_sc0003381.1_g000006 Rmu_sc0003507.1_g000007 Rmu_sc0003578.1_g000003 Rmu_sc0003693.1_g000004 Rmu_sc0003693.1_g000005 Rmu_sc0003704.1_g000003 Rmu_sc0003840.1_g000002 Rmu_sc0004084.1_g000026 Rmu_sc0004193.1_g000007 Rmu_sc0004234.1_g000033 Rmu_sc0004235.1_g000025 Rmu_sc0004435.1_g000006 Rmu_sc0004727.1_g000003 Rmu_sc0004741.1_g000001 Rmu_sc0004926.1_g000004 Rmu_sc0005365.1_g000001 Rmu_sc0005392.1_g000007 Rmu_sc0005415.1_g000001 Rmu_sc0005539.1_g000007 Rmu_sc0005708.1_g000017 Rmu_sc0006317.1_g000007 Rmu_sc0006453.1_g000054 Rmu_sc0006536.1_g000004 Rmu_sc0006740.1_g000022 Rmu_sc0006763.1_g000012 Rmu_sc0007115.1_g000002 Rmu_sc0007115.1_g000010 Rmu_sc0007129.1_g000017 Rmu_sc0007131.1_g000010 Rmu_sc0008373.1_g000008 Rmu_sc0009005.1_g000008 Rmu_sc0009252.1_g000007 Rmu_sc0009599.1_g000022 Rmu_sc0009785.1_g000027 Rmu_sc0009891.1_g000003 Rmu_sc0010099.1_g000010 Rmu_sc0010266.1_g000008 Rmu_sc0010334.1_g000003 Rmu_sc0010381.1_g000001 Rmu_sc0010496.1_g000003 Rmu_sc0010496.1_g000004 Rmu_sc0010546.1_g000003 Rmu_sc0011482.1_g000006 Rmu_sc0011875.1_g000010 Rmu_sc0011917.1_g000006 Rmu_sc0012293.1_g000004 Rmu_sc0012847.1_g000003 Rmu_sc0013773.1_g000001 Rmu_sc0016060.1_g000003 Rmu_sc0016170.1_g000013 Rmu_sc0016393.1_g000002 Rmu_sc0017589.1_g000001 Rmu_sc0017786.1_g000005 Rmu_sc0018326.1_g000002 Rmu_sc0020760.1_g000001 Rmu_sc0021262.1_g000003 Rmu_sc0023851.1_g000002 Rmu_sc0024044.1_g000001 Rmu_sc0026820.1_g000001 Rmu_sc0032306.1_g000001 Rmu_sc0035666.1_g000001 Rmu_sc0036881.1_g000001 Rmu_sc0037030.1_g000001 Rmu_sc0037158.1_g000001 Rmu_ssc0000016.1_g000002 Rmu_ssc0000044.1_g000012 Rmu_ssc0000044.1_g000014 Rmu_ssc0000050.1_g000064 Rmu_ssc0000064.1_g000022 Rmu_ssc0000154.1_g000037 Rmu_ssc0000178.1_g000013 Rmu_ssc0000217.1_g000022 Rmu_ssc0000392.1_g000004
rosa_roxburghii Rroxscaffold_3G00242000 Rroxscaffold_3G00242530 Rroxscaffold_6G00406010
rosa_rugosa Rorug01G0062000 Rorug02G0224000 Rorug02G0262900 Rorug02G0263000 Rorug02G0358900 Rorug02G0360500 Rorug02G0378500.1 Rorug02G0378600 Rorug02G0394700 Rorug03G0122900 Rorug03G0254600 Rorug03G0254700 Rorug03G0254800 Rorug04G0042200.1 Rorug04G0378100 Rorug05G0053400 Rorug05G0238600 Rorug05G0364500 Rorug05G0562000 Rorug06G0089300 Rorug06G0089400 Rorug06G0145700 Rorug07G0111600 Rorug07G0229500.1 Rorug07G0287600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 187
AccII CGCG 1 cut(s) 251
AciI CCGC 4 cut(s) 249, 251, 271, 627
AcoI YGGCCR 2 cut(s) 51, 388
AcsI RAATTY 1 cut(s) 611
AcvI CACGTG 1 cut(s) 184
AcyI GRCGYC 2 cut(s) 188, 442
AfaI GTAC 3 cut(s) 180, 397, 476
AfiI CCNNNNNNNGG 3 cut(s) 217, 223, 413
AflIII ACRYGT 1 cut(s) 181
AgsI TTSAA 2 cut(s) 304, 587
AjnI CCWGG 2 cut(s) 412, 519
AjuI GAANNNNNNNTTGG 2 cut(s) 420, 452
AluBI AGCT 2 cut(s) 385, 509
AluI AGCT 2 cut(s) 385, 509
Alw21I GWGCWC 1 cut(s) 18
AlwNI CAGNNNCTG 1 cut(s) 431
Ama87I CYCGRG 2 cut(s) 283, 487
AoxI GGCC 6 cut(s) 34, 51, 208, 226, 290, 388
ApeKI GCWGC 2 cut(s) 509, 634
ApoI RAATTY 1 cut(s) 611
AspLEI GCGC 2 cut(s) 190, 236
AspS9I GGNCC 4 cut(s) 4, 135, 209, 226
AsuC2I CCSGG 2 cut(s) 218, 225
AvaI CYCGRG 2 cut(s) 283, 487
AvaII GGWCC 2 cut(s) 4, 135
AxyI CCTNAGG 2 cut(s) 38, 350
BanI GGYRCC 1 cut(s) 187
BbrPI CACGTG 1 cut(s) 184
BbsI GAAGAC 2 cut(s) 143, 348
Bbv12I GWGCWC 1 cut(s) 18
BbvI GCAGC 2 cut(s) 496, 646
BccI CCATC 1 cut(s) 532
BcgI CGANNNNNNTGC 2 cut(s) 256, 290
BciT130I CCWGG 2 cut(s) 414, 521
BciVI GTATCC 1 cut(s) 247
BcnI CCSGG 2 cut(s) 218, 225
BfmI CTRYAG 1 cut(s) 510
BfoI RGCGCY 1 cut(s) 191
BfuI GTATCC 1 cut(s) 247
BglII AGATCT 1 cut(s) 580
BisI GCNGC 2 cut(s) 510, 635
BlsI GCNGC 2 cut(s) 511, 636
Bme1390I CCNGG 4 cut(s) 218, 225, 414, 521
Bme18I GGWCC 2 cut(s) 4, 135
BmeT110I CYCGRG 2 cut(s) 283, 487
BmgT120I GGNCC 4 cut(s) 4, 135, 209, 226
BmiI GGNNCC 5 cut(s) 44, 137, 189, 222, 411
BmrFI CCNGG 4 cut(s) 218, 225, 414, 521
BmsI GCATC 2 cut(s) 324, 439
BpiI GAAGAC 2 cut(s) 143, 348
BplI GAGNNNNNCTC 2 cut(s) 277, 309
BpuMI CCSGG 2 cut(s) 218, 225
Bsa29I ATCGAT 1 cut(s) 108
BsaAI YACGTR 1 cut(s) 184
BsaHI GRCGYC 2 cut(s) 188, 442
BsaJI CCNNGG 2 cut(s) 249, 563
BsaXI ACNNNNNCTCC 4 cut(s) 148, 178, 247, 277
Bsc4I CCNNNNNNNGG 3 cut(s) 217, 223, 413
Bse118I RCCGGY 1 cut(s) 390
Bse21I CCTNAGG 2 cut(s) 38, 350
Bse3DI GCAATG 3 cut(s) 229, 475, 629
BseBI CCWGG 2 cut(s) 414, 521
BseCI ATCGAT 1 cut(s) 108
BseDI CCNNGG 2 cut(s) 249, 563
BseGI GGATG 1 cut(s) 556
BseLI CCNNNNNNNGG 3 cut(s) 217, 223, 413
BseMI GCAATG 3 cut(s) 229, 475, 629
BseMII CTCAG 1 cut(s) 564
BseRI GAGGAG 1 cut(s) 505
BseXI GCAGC 2 cut(s) 496, 646
BsgI GTGCAG 1 cut(s) 260
Bsh1236I CGCG 1 cut(s) 251
BshFI GGCC 6 cut(s) 36, 53, 210, 228, 292, 390
BshNI GGYRCC 1 cut(s) 187
BshVI ATCGAT 1 cut(s) 108
BsiHKAI GWGCWC 1 cut(s) 18
BsiHKCI CYCGRG 2 cut(s) 283, 487
BsiSI CCGG 4 cut(s) 217, 224, 391, 407
BslFI GGGAC 1 cut(s) 121
BslI CCNNNNNNNGG 3 cut(s) 217, 223, 413
BsmFI GGGAC 1 cut(s) 121
BsnI GGCC 6 cut(s) 36, 53, 210, 228, 292, 390
BsoBI CYCGRG 2 cut(s) 283, 487
Bsp1286I GDGCHC 1 cut(s) 18
Bsp1407I TGTACA 1 cut(s) 474
Bsp143I GATC 4 cut(s) 9, 199, 525, 580
BspACI CCGC 4 cut(s) 249, 251, 271, 627
BspANI GGCC 6 cut(s) 36, 53, 210, 228, 292, 390
BspCNI CTCAG 1 cut(s) 565
BspDI ATCGAT 1 cut(s) 108
BspFNI CGCG 1 cut(s) 251
BspLI GGNNCC 5 cut(s) 44, 137, 189, 222, 411
BspMAI CTGCAG 1 cut(s) 514
BspT107I GGYRCC 1 cut(s) 187
BsrDI GCAATG 3 cut(s) 229, 475, 629
BsrFI RCCGGY 1 cut(s) 390
BsrGI TGTACA 1 cut(s) 474
BssAI RCCGGY 1 cut(s) 390
BssECI CCNNGG 2 cut(s) 249, 563
BssMI GATC 4 cut(s) 9, 199, 525, 580
BssNI GRCGYC 2 cut(s) 188, 442
BssT1I CCWWGG 1 cut(s) 563
Bst2UI CCWGG 2 cut(s) 414, 521
Bst4CI ACNGT 2 cut(s) 28, 460
BstACI GRCGYC 2 cut(s) 188, 442
BstAUI TGTACA 1 cut(s) 474
BstBAI YACGTR 1 cut(s) 184
BstC8I GCNNGC 2 cut(s) 275, 392
BstDEI CTNAG 3 cut(s) 38, 350, 573
BstDSI CCRYGG 1 cut(s) 249
BstF5I GGATG 1 cut(s) 556
BstFNI CGCG 1 cut(s) 251
BstH2I RGCGCY 1 cut(s) 191
BstHHI GCGC 2 cut(s) 190, 236
BstKTI GATC 4 cut(s) 12, 202, 528, 583
BstMBI GATC 4 cut(s) 9, 199, 525, 580
BstMWI GCNNNNNNNGC 1 cut(s) 391
BstNI CCWGG 2 cut(s) 414, 521
BstSCI CCNGG 4 cut(s) 216, 223, 412, 519
BstSFI CTRYAG 1 cut(s) 510
BstUI CGCG 1 cut(s) 251
BstV1I GCAGC 2 cut(s) 496, 646
BstV2I GAAGAC 2 cut(s) 143, 348
BstX2I RGATCY 1 cut(s) 580
BstXI CCANNNNNNTGG 1 cut(s) 175
BstYI RGATCY 1 cut(s) 580
Bsu15I ATCGAT 1 cut(s) 108
Bsu36I CCTNAGG 2 cut(s) 38, 350
BsuI GTATCC 1 cut(s) 247
BsuRI GGCC 6 cut(s) 36, 53, 210, 228, 292, 390
BsuTUI ATCGAT 1 cut(s) 108
BtgI CCRYGG 1 cut(s) 249
BtsCI GGATG 1 cut(s) 556
BtsIMutI CAGTG 1 cut(s) 570
Cac8I GCNNGC 2 cut(s) 275, 392
CaiI CAGNNNCTG 1 cut(s) 431
CfoI GCGC 2 cut(s) 190, 236
Cfr10I RCCGGY 1 cut(s) 390
Cfr13I GGNCC 4 cut(s) 4, 135, 209, 226
Cfr42I CCGCGG 1 cut(s) 252
ClaI ATCGAT 1 cut(s) 108
CseI GACGC 1 cut(s) 450
CsiI ACCWGGT 1 cut(s) 412
Csp6I GTAC 3 cut(s) 179, 396, 475
CviAII CATG 3 cut(s) 47, 159, 529
CviQI GTAC 3 cut(s) 179, 396, 475
DdeI CTNAG 3 cut(s) 38, 350, 573
DinI GGCGCC 1 cut(s) 189
DpnI GATC 4 cut(s) 11, 201, 527, 582
DpnII GATC 4 cut(s) 9, 199, 525, 580
EaeI YGGCCR 2 cut(s) 51, 388
Eco130I CCWWGG 1 cut(s) 563
Eco147I AGGCCT 2 cut(s) 36, 292
Eco47I GGWCC 2 cut(s) 4, 135
Eco72I CACGTG 1 cut(s) 184
Eco81I CCTNAGG 2 cut(s) 38, 350
Eco88I CYCGRG 2 cut(s) 283, 487
EcoO109I RGGNCCY 1 cut(s) 135
EcoRII CCWGG 2 cut(s) 412, 519
EcoT14I CCWWGG 1 cut(s) 563
EgeI GGCGCC 1 cut(s) 189
EheI GGCGCC 1 cut(s) 189
ErhI CCWWGG 1 cut(s) 563
FaeI CATG 3 cut(s) 50, 162, 532
FalI AAGNNNNNCTT 2 cut(s) 280, 312
FaqI GGGAC 1 cut(s) 121
FatI CATG 3 cut(s) 46, 158, 528
FauI CCCGC 1 cut(s) 278
FauNDI CATATG 1 cut(s) 592
Fnu4HI GCNGC 2 cut(s) 510, 635
FokI GGATG 1 cut(s) 543
Fsp4HI GCNGC 2 cut(s) 510, 635
GlaI GCGC 2 cut(s) 189, 235
GluI GCNGC 2 cut(s) 510, 635
HaeII RGCGCY 1 cut(s) 191
HaeIII GGCC 6 cut(s) 36, 53, 210, 228, 292, 390
HapII CCGG 4 cut(s) 217, 224, 391, 407
HgaI GACGC 1 cut(s) 450
HhaI GCGC 2 cut(s) 190, 236
Hin1I GRCGYC 2 cut(s) 188, 442
Hin1II CATG 3 cut(s) 50, 162, 532
Hin6I GCGC 2 cut(s) 188, 234
HinP1I GCGC 2 cut(s) 188, 234
HincII GTYRAC 1 cut(s) 24
HindII GTYRAC 1 cut(s) 24
HinfI GANTC 5 cut(s) 110, 163, 260, 428, 542
HpaI GTTAAC 1 cut(s) 24
HpaII CCGG 4 cut(s) 217, 224, 391, 407
Hpy166II GTNNAC 4 cut(s) 24, 181, 475, 570
Hpy188I TCNGA 4 cut(s) 62, 267, 367, 433
Hpy188III TCNNGA 3 cut(s) 331, 487, 584
Hpy8I GTNNAC 4 cut(s) 24, 181, 475, 570
HpyAV CCTTC 2 cut(s) 282, 306
HpyCH4III ACNGT 2 cut(s) 28, 460
HpyCH4IV ACGT 1 cut(s) 183
HpyCH4V TGCA 4 cut(s) 31, 277, 512, 634
HpyF10VI GCNNNNNNNGC 1 cut(s) 391
HpyF3I CTNAG 3 cut(s) 38, 350, 573
HpySE526I ACGT 1 cut(s) 183
Hsp92I GRCGYC 2 cut(s) 188, 442
Hsp92II CATG 3 cut(s) 50, 162, 532
HspAI GCGC 2 cut(s) 188, 234
KasI GGCGCC 1 cut(s) 187
KroI GCCGGC 1 cut(s) 390
KroNI GCCGGC 1 cut(s) 392
KspAI GTTAAC 1 cut(s) 24
KspI CCGCGG 1 cut(s) 252
Kzo9I GATC 4 cut(s) 9, 199, 525, 580
LmnI GCTCC 2 cut(s) 48, 382
Lsp1109I GCAGC 2 cut(s) 496, 646
LweI GCATC 2 cut(s) 324, 439
MabI ACCWGGT 1 cut(s) 412
MaeII ACGT 1 cut(s) 183
MalI GATC 4 cut(s) 11, 201, 527, 582
MboI GATC 4 cut(s) 9, 199, 525, 580
MboII GAAGA 3 cut(s) 143, 348, 590
MflI RGATCY 1 cut(s) 580
MhlI GDGCHC 1 cut(s) 18
MluCI AATT 1 cut(s) 611
Mly113I GGCGCC 1 cut(s) 188
MlyI GAGTC 3 cut(s) 157, 254, 536
MmeI TCCRAC 1 cut(s) 290
MnlI CCTC 9 cut(s) 88, 101, 303, 328, 370, 483, 564, 568, 648
MroNI GCCGGC 1 cut(s) 390
MseI TTAA 2 cut(s) 23, 99
MspA1I CMGCKG 1 cut(s) 251
MspI CCGG 4 cut(s) 217, 224, 391, 407
MspR9I CCNGG 4 cut(s) 218, 225, 414, 521
MvaI CCWGG 2 cut(s) 414, 521
MvnI CGCG 1 cut(s) 251
MwoI GCNNNNNNNGC 1 cut(s) 391
NaeI GCCGGC 1 cut(s) 392
NarI GGCGCC 1 cut(s) 188
NciI CCSGG 2 cut(s) 218, 225
NdeI CATATG 1 cut(s) 592
NdeII GATC 4 cut(s) 9, 199, 525, 580
NgoMIV GCCGGC 1 cut(s) 390
NlaIII CATG 3 cut(s) 50, 162, 532
NlaIV GGNNCC 5 cut(s) 44, 137, 189, 222, 411
PaeR7I CTCGAG 1 cut(s) 487
PceI AGGCCT 2 cut(s) 36, 292
PcsI WCGNNNNNNNCGW 1 cut(s) 263
PdiI GCCGGC 1 cut(s) 392
PfeI GAWTC 2 cut(s) 110, 428
PkrI GCNGC 2 cut(s) 511, 636
PleI GAGTC 3 cut(s) 157, 254, 536
PluTI GGCGCC 1 cut(s) 191
PmaCI CACGTG 1 cut(s) 184
PmlI CACGTG 1 cut(s) 184
PpsI GAGTC 3 cut(s) 157, 254, 536
Ppu21I YACGTR 1 cut(s) 184
PpuMI RGGWCCY 1 cut(s) 135
Psp5II RGGWCCY 1 cut(s) 135
Psp6I CCWGG 2 cut(s) 412, 519
PspCI CACGTG 1 cut(s) 184
PspGI CCWGG 2 cut(s) 412, 519
PspN4I GGNNCC 5 cut(s) 44, 137, 189, 222, 411
PspPI GGNCC 4 cut(s) 4, 135, 209, 226
PspPPI RGGWCCY 1 cut(s) 135
PstI CTGCAG 1 cut(s) 514
PstNI CAGNNNCTG 1 cut(s) 431
PsuI RGATCY 1 cut(s) 580
RsaI GTAC 3 cut(s) 180, 397, 476
RsaNI GTAC 3 cut(s) 179, 396, 475
SacII CCGCGG 1 cut(s) 252
SaqAI TTAA 2 cut(s) 23, 99
SatI GCNGC 2 cut(s) 510, 635
Sau3AI GATC 4 cut(s) 9, 199, 525, 580
Sau96I GGNCC 4 cut(s) 4, 135, 209, 226
SchI GAGTC 3 cut(s) 157, 254, 536
ScrFI CCNGG 4 cut(s) 218, 225, 414, 521
SduI GDGCHC 1 cut(s) 18
SetI ASST 8 cut(s) 137, 186, 320, 356, 387, 418, 511, 650
SexAI ACCWGGT 1 cut(s) 412
SfaNI GCATC 2 cut(s) 324, 439
SfcI CTRYAG 1 cut(s) 510
SfoI GGCGCC 1 cut(s) 189
Sfr274I CTCGAG 1 cut(s) 487
Sfr303I CCGCGG 1 cut(s) 252
SgrBI CCGCGG 1 cut(s) 252
SinI GGWCC 2 cut(s) 4, 135
SlaI CTCGAG 1 cut(s) 487
SmlI CTYRAG 1 cut(s) 487
SmoI CTYRAG 1 cut(s) 487
Sse9I AATT 1 cut(s) 611
SseBI AGGCCT 2 cut(s) 36, 292
SsiI CCGC 4 cut(s) 249, 251, 271, 627
SspDI GGCGCC 1 cut(s) 187
StuI AGGCCT 2 cut(s) 36, 292
StyD4I CCNGG 4 cut(s) 216, 223, 412, 519
StyI CCWWGG 1 cut(s) 563
TaaI ACNGT 2 cut(s) 28, 460
TaiI ACGT 1 cut(s) 186
TaqI TCGA 3 cut(s) 12, 108, 488
TasI AATT 1 cut(s) 611
TatI WGTACW 1 cut(s) 474
TfiI GAWTC 2 cut(s) 110, 428
Tru1I TTAA 2 cut(s) 23, 99
Tru9I TTAA 2 cut(s) 23, 99
TscAI CASTG 1 cut(s) 577
TseI GCWGC 2 cut(s) 509, 634
TspGWI ACGGA 1 cut(s) 272
TspRI CASTG 1 cut(s) 577
VpaK11BI GGWCC 2 cut(s) 4, 135
XapI RAATTY 1 cut(s) 611
XhoI CTCGAG 1 cut(s) 487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.