Rmu_sc0000928.1_g000020

Zinc knuckle

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000928.1
OG0000187
Physical Location & Seq
Forward (+)
82793 .. 83797
1005 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000928.1_g000020.1.cds

Sequence Viewer

Length: 1005 bp
ctggagggtaaatgggttgttgcaggtggaggaagcagaagggtagagggtccttgtcacgttgtcggatccgtcggattgtattcggatctggcgccggtagccttagcatggtacgatggcattatgccggcggagaaggtgccactgaccttggcatcgtactgggtaactcttcagggtatcccactggctttccgatctgaatgtgttatgaccatgatcggttatacgctgggggatttccaggaaattgataagaatgctaagaagattgggaagctgcggattcgggtggagatcccgttgaacaaaccattacccttcaagcggtggtatttggtggaggacaaggttgaatttcgatgtcagttcaagtatgacaaaaattttgggagatgctctgtgtgtggtcttgttatgcatgtgggtttgccgtgctcggggccgacactagacgaagatgacgatgaagctgaacgcaccgttctggggtcaaaggatacggggccggaggcgaatgtaggaggcttgccggtgggaactctggccgggtcagcttctggtactgccagtagcagtggactccatactggagcgagaactagggtttctaccccatgcccacccttggtttttccaacgccggatcctggttcgagtggggagctttgcctgaatgcaatgtttcagaagcagaagcgccaggttgtggtgcgtgagcttcatgacaaaacaagaactccggagcgtgtaactggcaagcgacagggaagagatgacagcctaacaatttctcccaagaaactaaaactgagtttggctgtgggaaagcgaaacctcattctggattttgaaaatcttgacttgaattctgtacaggaggacatccattctgactgggtgacaaggaaacgaggccgacctattggaagtaggaataagtcgtcttctggtgacaagcagaaagcctcaaaacatggggaggactcatgtggtaactaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

334

Amino Acids

36.39

Weight (kDa)

8.97

Isoelectric Point (pI)

40.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000187)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20170 FvH4_4g06831
rosa_chinensis RchiOBHm_Chr1g0321991 RchiOBHm_Chr2g0161811
rosa_laevigata RLG00000015375 RLG00000018377
rosa_multiflora Rmu_co8011754.1_g000001 Rmu_co8019986.1_g000001 Rmu_co8067766.1_g000001 Rmu_co8156128.1_g000001 Rmu_co8219154.1_g000003 Rmu_co8297235.1_g000001 Rmu_co8345223.1_g000001 Rmu_co8364775.1_g000001 Rmu_co8465075.1_g000001 Rmu_sc0000007.1_g000002 Rmu_sc0000054.1_g000015 Rmu_sc0000054.1_g000023 Rmu_sc0000145.1_g000010 Rmu_sc0000166.1_g000006 Rmu_sc0000218.1_g000012 Rmu_sc0000339.1_g000008 Rmu_sc0000342.1_g000015 Rmu_sc0000464.1_g000008 Rmu_sc0000620.1_g000003 Rmu_sc0000638.1_g000017 Rmu_sc0000890.1_g000007 Rmu_sc0000894.1_g000024 Rmu_sc0000909.1_g000010 Rmu_sc0000928.1_g000020 Rmu_sc0000977.1_g000007 Rmu_sc0001022.1_g000003 Rmu_sc0001035.1_g000037 Rmu_sc0001060.1_g000008 Rmu_sc0001168.1_g000005 Rmu_sc0001173.1_g000022 Rmu_sc0001179.1_g000016 Rmu_sc0001408.1_g000003 Rmu_sc0001455.1_g000005 Rmu_sc0001484.1_g000008 Rmu_sc0001585.1_g000010 Rmu_sc0001702.1_g000030 Rmu_sc0001755.1_g000063 Rmu_sc0001903.1_g000009 Rmu_sc0002099.1_g000001 Rmu_sc0002142.1_g000012 Rmu_sc0002158.1_g000014 Rmu_sc0002307.1_g000009 Rmu_sc0002358.1_g000013 Rmu_sc0002421.1_g000002 Rmu_sc0002426.1_g000003 Rmu_sc0002438.1_g000001 Rmu_sc0002461.1_g000001 Rmu_sc0002508.1_g000003 Rmu_sc0002532.1_g000056 Rmu_sc0002583.1_g000002 Rmu_sc0002927.1_g000033 Rmu_sc0003033.1_g000040 Rmu_sc0003271.1_g000006 Rmu_sc0003381.1_g000006 Rmu_sc0003507.1_g000007 Rmu_sc0003578.1_g000003 Rmu_sc0003693.1_g000004 Rmu_sc0003693.1_g000005 Rmu_sc0003704.1_g000003 Rmu_sc0003840.1_g000002 Rmu_sc0004084.1_g000026 Rmu_sc0004193.1_g000007 Rmu_sc0004234.1_g000033 Rmu_sc0004235.1_g000025 Rmu_sc0004435.1_g000006 Rmu_sc0004727.1_g000003 Rmu_sc0004741.1_g000001 Rmu_sc0004926.1_g000004 Rmu_sc0005365.1_g000001 Rmu_sc0005392.1_g000007 Rmu_sc0005415.1_g000001 Rmu_sc0005539.1_g000007 Rmu_sc0005708.1_g000017 Rmu_sc0006317.1_g000007 Rmu_sc0006453.1_g000054 Rmu_sc0006536.1_g000004 Rmu_sc0006740.1_g000022 Rmu_sc0006763.1_g000012 Rmu_sc0007115.1_g000002 Rmu_sc0007115.1_g000010 Rmu_sc0007129.1_g000017 Rmu_sc0007131.1_g000010 Rmu_sc0008373.1_g000008 Rmu_sc0009005.1_g000008 Rmu_sc0009252.1_g000007 Rmu_sc0009599.1_g000022 Rmu_sc0009785.1_g000027 Rmu_sc0009891.1_g000003 Rmu_sc0010099.1_g000010 Rmu_sc0010266.1_g000008 Rmu_sc0010334.1_g000003 Rmu_sc0010381.1_g000001 Rmu_sc0010496.1_g000003 Rmu_sc0010496.1_g000004 Rmu_sc0010546.1_g000003 Rmu_sc0011482.1_g000006 Rmu_sc0011875.1_g000010 Rmu_sc0011917.1_g000006 Rmu_sc0012293.1_g000004 Rmu_sc0012847.1_g000003 Rmu_sc0013773.1_g000001 Rmu_sc0016060.1_g000003 Rmu_sc0016170.1_g000013 Rmu_sc0016393.1_g000002 Rmu_sc0017589.1_g000001 Rmu_sc0017786.1_g000005 Rmu_sc0018326.1_g000002 Rmu_sc0020760.1_g000001 Rmu_sc0021262.1_g000003 Rmu_sc0023851.1_g000002 Rmu_sc0024044.1_g000001 Rmu_sc0026820.1_g000001 Rmu_sc0032306.1_g000001 Rmu_sc0035666.1_g000001 Rmu_sc0036881.1_g000001 Rmu_sc0037030.1_g000001 Rmu_sc0037158.1_g000001 Rmu_ssc0000016.1_g000002 Rmu_ssc0000044.1_g000012 Rmu_ssc0000044.1_g000014 Rmu_ssc0000050.1_g000064 Rmu_ssc0000064.1_g000022 Rmu_ssc0000154.1_g000037 Rmu_ssc0000178.1_g000013 Rmu_ssc0000217.1_g000022 Rmu_ssc0000392.1_g000004
rosa_roxburghii Rroxscaffold_3G00242000 Rroxscaffold_3G00242530 Rroxscaffold_6G00406010
rosa_rugosa Rorug01G0062000 Rorug02G0224000 Rorug02G0262900 Rorug02G0263000 Rorug02G0358900 Rorug02G0360500 Rorug02G0378500.1 Rorug02G0378600 Rorug02G0394700 Rorug03G0122900 Rorug03G0254600 Rorug03G0254700 Rorug03G0254800 Rorug04G0042200.1 Rorug04G0378100 Rorug05G0053400 Rorug05G0238600 Rorug05G0364500 Rorug05G0562000 Rorug06G0089300 Rorug06G0089400 Rorug06G0145700 Rorug07G0111600 Rorug07G0229500.1 Rorug07G0287600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 14
Acc36I ACCTGC 1 cut(s) 14
AccB1I GGYRCC 2 cut(s) 94, 142
AccB7I CCANNNNNTGG 1 cut(s) 712
AccIII TCCGGA 1 cut(s) 745
AciI CCGC 3 cut(s) 134, 286, 331
AclWI GGATC 6 cut(s) 63, 76, 96, 295, 644, 657
AcoI YGGCCR 1 cut(s) 549
AcsI RAATTY 3 cut(s) 359, 388, 871
AcuI CTGAAG 1 cut(s) 161
AcyI GRCGYC 1 cut(s) 95
AfaI GTAC 4 cut(s) 116, 164, 568, 879
AfiI CCNNNNNNNGG 8 cut(s) 111, 330, 443, 492, 631, 653, 712, 847
AgsI TTSAA 6 cut(s) 310, 328, 359, 376, 857, 871
AjnI CCWGG 3 cut(s) 246, 652, 705
AluBI AGCT 5 cut(s) 283, 476, 560, 670, 724
AluI AGCT 5 cut(s) 283, 476, 560, 670, 724
Alw21I GWGCWC 1 cut(s) 443
AlwI GGATC 6 cut(s) 63, 76, 96, 295, 644, 657
AlwNI CAGNNNCTG 1 cut(s) 563
Ama87I CYCGRG 1 cut(s) 442
Aor13HI TCCGGA 1 cut(s) 745
AoxI GGCC 4 cut(s) 446, 509, 549, 919
ApeKI GCWGC 1 cut(s) 283
ApoI RAATTY 3 cut(s) 359, 388, 871
ArsI GACNNNNNNTTYG 2 cut(s) 374, 406
AspLEI GCGC 2 cut(s) 97, 705
AspS9I GGNCC 3 cut(s) 50, 446, 509
AsuC2I CCSGG 1 cut(s) 553
AsuHPI GGTGA 2 cut(s) 916, 968
AvaI CYCGRG 1 cut(s) 442
AvaII GGWCC 1 cut(s) 50
BamHI GGATCC 2 cut(s) 68, 649
BanI GGYRCC 2 cut(s) 94, 142
BbsI GAAGAC 1 cut(s) 942
Bbv12I GWGCWC 1 cut(s) 443
BbvI GCAGC 1 cut(s) 270
BccI CCATC 1 cut(s) 113
BceAI ACGGC 1 cut(s) 421
BciT130I CCWGG 3 cut(s) 248, 654, 707
BciVI GTATCC 2 cut(s) 194, 496
BcnI CCSGG 1 cut(s) 553
BfaI CTAG 2 cut(s) 455, 606
BfoI RGCGCY 2 cut(s) 98, 706
BfuAI ACCTGC 1 cut(s) 14
BfuI GTATCC 2 cut(s) 194, 496
BisI GCNGC 1 cut(s) 284
BlsI GCNGC 1 cut(s) 285
Bme1390I CCNGG 4 cut(s) 248, 553, 654, 707
Bme18I GGWCC 1 cut(s) 50
BmeT110I CYCGRG 1 cut(s) 442
BmgT120I GGNCC 3 cut(s) 50, 446, 509
BmiI GGNNCC 7 cut(s) 51, 70, 96, 144, 447, 510, 651
BmrFI CCNGG 4 cut(s) 248, 553, 654, 707
BmrI ACTGGG 2 cut(s) 175, 910
BmsI GCATC 2 cut(s) 167, 389
BmuI ACTGGG 2 cut(s) 175, 910
BpiI GAAGAC 1 cut(s) 942
BpmI CTGGAG 2 cut(s) 23, 615
Bpu10I CCTNAGC 1 cut(s) 106
BpuMI CCSGG 1 cut(s) 553
BsaHI GRCGYC 1 cut(s) 95
BsaJI CCNNGG 2 cut(s) 153, 630
BsaWI WCCGGW 1 cut(s) 745
BsaXI ACNNNNNCTCC 6 cut(s) 290, 320, 727, 757, 781, 811
Bsc4I CCNNNNNNNGG 8 cut(s) 111, 330, 443, 492, 631, 653, 712, 847
Bse118I RCCGGY 3 cut(s) 97, 130, 535
Bse1I ACTGG 6 cut(s) 170, 195, 573, 598, 763, 905
Bse3DI GCAATG 1 cut(s) 690
BseAI TCCGGA 1 cut(s) 745
BseBI CCWGG 3 cut(s) 248, 654, 707
BseDI CCNNGG 2 cut(s) 153, 630
BseGI GGATG 1 cut(s) 888
BseLI CCNNNNNNNGG 8 cut(s) 111, 330, 443, 492, 631, 653, 712, 847
BseMI GCAATG 1 cut(s) 690
BseMII CTCAG 1 cut(s) 806
BseNI ACTGG 6 cut(s) 170, 195, 573, 598, 763, 905
BseXI GCAGC 1 cut(s) 270
BseYI CCCAGC 1 cut(s) 235
BshFI GGCC 4 cut(s) 448, 511, 551, 921
BshNI GGYRCC 2 cut(s) 94, 142
BsiHKAI GWGCWC 1 cut(s) 443
BsiHKCI CYCGRG 1 cut(s) 442
BsiSI CCGG 7 cut(s) 98, 131, 512, 536, 552, 647, 746
BslI CCNNNNNNNGG 8 cut(s) 111, 330, 443, 492, 631, 653, 712, 847
BsmI GAATGC 2 cut(s) 268, 685
BsnI GGCC 4 cut(s) 448, 511, 551, 921
BsoBI CYCGRG 1 cut(s) 442
Bsp1286I GDGCHC 1 cut(s) 443
Bsp13I TCCGGA 1 cut(s) 745
Bsp1407I TGTACA 1 cut(s) 877
Bsp143I GATC 6 cut(s) 68, 88, 200, 222, 300, 649
BspACI CCGC 3 cut(s) 134, 286, 331
BspANI GGCC 4 cut(s) 448, 511, 551, 921
BspCNI CTCAG 1 cut(s) 807
BspEI TCCGGA 1 cut(s) 745
BspHI TCATGA 1 cut(s) 727
BspLI GGNNCC 7 cut(s) 51, 70, 96, 144, 447, 510, 651
BspMI ACCTGC 1 cut(s) 14
BspPI GGATC 6 cut(s) 63, 76, 96, 295, 644, 657
BspT107I GGYRCC 2 cut(s) 94, 142
BsrDI GCAATG 1 cut(s) 690
BsrFI RCCGGY 3 cut(s) 97, 130, 535
BsrGI TGTACA 1 cut(s) 877
BsrI ACTGG 6 cut(s) 170, 195, 573, 598, 763, 905
BssAI RCCGGY 3 cut(s) 97, 130, 535
BssECI CCNNGG 2 cut(s) 153, 630
BssMI GATC 6 cut(s) 68, 88, 200, 222, 300, 649
BssNI GRCGYC 1 cut(s) 95
BssT1I CCWWGG 2 cut(s) 153, 630
Bst2UI CCWGG 3 cut(s) 248, 654, 707
Bst4CI ACNGT 1 cut(s) 487
Bst6I CTCTTC 2 cut(s) 180, 769
BstACI GRCGYC 1 cut(s) 95
BstAUI TGTACA 1 cut(s) 877
BstC8I GCNNGC 3 cut(s) 132, 533, 764
BstDEI CTNAG 3 cut(s) 106, 267, 815
BstF5I GGATG 1 cut(s) 888
BstH2I RGCGCY 2 cut(s) 98, 706
BstHHI GCGC 2 cut(s) 97, 705
BstKTI GATC 6 cut(s) 71, 91, 203, 225, 303, 652
BstMBI GATC 6 cut(s) 68, 88, 200, 222, 300, 649
BstMWI GCNNNNNNNGC 2 cut(s) 101, 557
BstNI CCWGG 3 cut(s) 248, 654, 707
BstNSI RCATGY 1 cut(s) 428
BstSCI CCNGG 4 cut(s) 246, 551, 652, 705
BstV1I GCAGC 1 cut(s) 270
BstV2I GAAGAC 1 cut(s) 942
BstX2I RGATCY 4 cut(s) 68, 88, 300, 649
BstYI RGATCY 4 cut(s) 68, 88, 300, 649
BsuI GTATCC 2 cut(s) 194, 496
BsuRI GGCC 4 cut(s) 448, 511, 551, 921
BtsCI GGATG 1 cut(s) 888
BtsI GCAGTG 1 cut(s) 586
BtsIMutI CAGTG 3 cut(s) 146, 188, 586
BveI ACCTGC 1 cut(s) 14
Cac8I GCNNGC 3 cut(s) 132, 533, 764
CaiI CAGNNNCTG 1 cut(s) 563
CciI TCATGA 1 cut(s) 727
CfoI GCGC 2 cut(s) 97, 705
Cfr10I RCCGGY 3 cut(s) 97, 130, 535
Cfr13I GGNCC 3 cut(s) 50, 446, 509
Csp6I GTAC 4 cut(s) 115, 163, 567, 878
CspCI CAANNNNNGTGG 2 cut(s) 135, 170
CviAII CATG 7 cut(s) 111, 220, 425, 621, 728, 980, 993
CviQI GTAC 4 cut(s) 115, 163, 567, 878
DdeI CTNAG 3 cut(s) 106, 267, 815
DinI GGCGCC 1 cut(s) 96
DpnI GATC 6 cut(s) 70, 90, 202, 224, 302, 651
DpnII GATC 6 cut(s) 68, 88, 200, 222, 300, 649
EaeI YGGCCR 1 cut(s) 549
Eam1104I CTCTTC 2 cut(s) 180, 769
EarI CTCTTC 2 cut(s) 180, 769
EciI GGCGGA 1 cut(s) 149
Eco130I CCWWGG 2 cut(s) 153, 630
Eco47I GGWCC 1 cut(s) 50
Eco57I CTGAAG 1 cut(s) 161
Eco88I CYCGRG 1 cut(s) 442
EcoO109I RGGNCCY 1 cut(s) 50
EcoRI GAATTC 1 cut(s) 871
EcoRII CCWGG 3 cut(s) 246, 652, 705
EcoT14I CCWWGG 2 cut(s) 153, 630
EcoT22I ATGCAT 1 cut(s) 426
EgeI GGCGCC 1 cut(s) 96
EheI GGCGCC 1 cut(s) 96
ErhI CCWWGG 2 cut(s) 153, 630
FaeI CATG 7 cut(s) 114, 223, 428, 624, 731, 983, 996
FatI CATG 7 cut(s) 110, 219, 424, 620, 727, 979, 992
Fnu4HI GCNGC 1 cut(s) 284
FokI GGATG 1 cut(s) 875
Fsp4HI GCNGC 1 cut(s) 284
FspBI CTAG 2 cut(s) 455, 606
GlaI GCGC 2 cut(s) 96, 704
GluI GCNGC 1 cut(s) 284
GsaI CCCAGC 1 cut(s) 239
GsuI CTGGAG 2 cut(s) 23, 615
HaeII RGCGCY 2 cut(s) 98, 706
HaeIII GGCC 4 cut(s) 448, 511, 551, 921
HapII CCGG 7 cut(s) 98, 131, 512, 536, 552, 647, 746
HhaI GCGC 2 cut(s) 97, 705
Hin1I GRCGYC 1 cut(s) 95
Hin1II CATG 7 cut(s) 114, 223, 428, 624, 731, 983, 996
Hin6I GCGC 2 cut(s) 95, 703
HinP1I GCGC 2 cut(s) 95, 703
HinfI GANTC 3 cut(s) 289, 585, 989
HpaII CCGG 7 cut(s) 98, 131, 512, 536, 552, 647, 746
HphI GGTGA 2 cut(s) 916, 968
Hpy166II GTNNAC 1 cut(s) 584
Hpy188I TCNGA 7 cut(s) 68, 77, 88, 200, 205, 693, 898
Hpy188III TCNNGA 4 cut(s) 728, 746, 848, 863
Hpy8I GTNNAC 1 cut(s) 584
Hpy99I CGWCG 1 cut(s) 77
HpyAV CCTTC 3 cut(s) 33, 133, 334
HpyCH4III ACNGT 1 cut(s) 487
HpyCH4IV ACGT 1 cut(s) 60
HpyCH4V TGCA 3 cut(s) 23, 424, 683
HpyF10VI GCNNNNNNNGC 2 cut(s) 101, 557
HpyF3I CTNAG 3 cut(s) 106, 267, 815
HpySE526I ACGT 1 cut(s) 60
Hsp92I GRCGYC 1 cut(s) 95
Hsp92II CATG 7 cut(s) 114, 223, 428, 624, 731, 983, 996
HspAI GCGC 2 cut(s) 95, 703
KasI GGCGCC 1 cut(s) 94
Kpn2I TCCGGA 1 cut(s) 745
KroI GCCGGC 1 cut(s) 130
KroNI GCCGGC 1 cut(s) 132
Kzo9I GATC 6 cut(s) 68, 88, 200, 222, 300, 649
LmnI GCTCC 3 cut(s) 596, 667, 748
Lsp1109I GCAGC 1 cut(s) 270
LweI GCATC 2 cut(s) 167, 389
MaeI CTAG 2 cut(s) 455, 606
MaeII ACGT 1 cut(s) 60
MaeIII GTNAC 6 cut(s) 56, 169, 754, 904, 956, 998
MalI GATC 6 cut(s) 70, 90, 202, 224, 302, 651
MboI GATC 6 cut(s) 68, 88, 200, 222, 300, 649
MboII GAAGA 5 cut(s) 167, 283, 473, 786, 942
MflI RGATCY 4 cut(s) 68, 88, 300, 649
MhlI GDGCHC 1 cut(s) 443
MluCI AATT 5 cut(s) 252, 359, 388, 792, 871
Mly113I GGCGCC 1 cut(s) 95
MlyI GAGTC 2 cut(s) 579, 983
MmeI TCCRAC 3 cut(s) 46, 55, 665
Mph1103I ATGCAT 1 cut(s) 426
MroI TCCGGA 1 cut(s) 745
MroNI GCCGGC 1 cut(s) 130
MspI CCGG 7 cut(s) 98, 131, 512, 536, 552, 647, 746
MspR9I CCNGG 4 cut(s) 248, 553, 654, 707
Mva1269I GAATGC 2 cut(s) 268, 685
MvaI CCWGG 3 cut(s) 248, 654, 707
MwoI GCNNNNNNNGC 2 cut(s) 101, 557
NaeI GCCGGC 1 cut(s) 132
NarI GGCGCC 1 cut(s) 95
NciI CCSGG 1 cut(s) 553
NdeII GATC 6 cut(s) 68, 88, 200, 222, 300, 649
NgoMIV GCCGGC 1 cut(s) 130
NlaIII CATG 7 cut(s) 114, 223, 428, 624, 731, 983, 996
NlaIV GGNNCC 7 cut(s) 51, 70, 96, 144, 447, 510, 651
NmuCI GTSAC 3 cut(s) 56, 904, 956
NsiI ATGCAT 1 cut(s) 426
NspI RCATGY 1 cut(s) 428
PagI TCATGA 1 cut(s) 727
PaqCI CACCTGC 1 cut(s) 14
PcsI WCGNNNNNNNCGW 1 cut(s) 465
PctI GAATGC 2 cut(s) 268, 685
PdiI GCCGGC 1 cut(s) 132
PfeI GAWTC 1 cut(s) 289
PflMI CCANNNNNTGG 1 cut(s) 712
PfoI TCCNGGA 1 cut(s) 246
PkrI GCNGC 1 cut(s) 285
PleI GAGTC 2 cut(s) 579, 983
PluTI GGCGCC 1 cut(s) 98
PpsI GAGTC 2 cut(s) 579, 983
PpuMI RGGWCCY 1 cut(s) 50
Psp5II RGGWCCY 1 cut(s) 50
Psp6I CCWGG 3 cut(s) 246, 652, 705
PspFI CCCAGC 1 cut(s) 235
PspGI CCWGG 3 cut(s) 246, 652, 705
PspN4I GGNNCC 7 cut(s) 51, 70, 96, 144, 447, 510, 651
PspPI GGNCC 3 cut(s) 50, 446, 509
PspPPI RGGWCCY 1 cut(s) 50
PstNI CAGNNNCTG 1 cut(s) 563
PsuI RGATCY 4 cut(s) 68, 88, 300, 649
RsaI GTAC 4 cut(s) 116, 164, 568, 879
RsaNI GTAC 4 cut(s) 115, 163, 567, 878
SatI GCNGC 1 cut(s) 284
Sau3AI GATC 6 cut(s) 68, 88, 200, 222, 300, 649
Sau96I GGNCC 3 cut(s) 50, 446, 509
SchI GAGTC 2 cut(s) 579, 983
ScrFI CCNGG 4 cut(s) 248, 553, 654, 707
SduI GDGCHC 1 cut(s) 443
SfaNI GCATC 2 cut(s) 167, 389
SfoI GGCGCC 1 cut(s) 96
SinI GGWCC 1 cut(s) 50
Sse9I AATT 5 cut(s) 252, 359, 388, 792, 871
SsiI CCGC 3 cut(s) 134, 286, 331
SspDI GGCGCC 1 cut(s) 94
SspMI CTAG 2 cut(s) 455, 606
StyD4I CCNGG 4 cut(s) 246, 551, 652, 705
StyI CCWWGG 2 cut(s) 153, 630
TaaI ACNGT 1 cut(s) 487
TaiI ACGT 1 cut(s) 63
TaqI TCGA 2 cut(s) 364, 659
TasI AATT 5 cut(s) 252, 359, 388, 792, 871
TatI WGTACW 1 cut(s) 877
TfiI GAWTC 1 cut(s) 289
TscAI CASTG 3 cut(s) 153, 195, 586
TseFI GTSAC 3 cut(s) 56, 904, 956
TseI GCWGC 1 cut(s) 283
Tsp45I GTSAC 3 cut(s) 56, 904, 956
TspDTI ATGAA 2 cut(s) 486, 716
TspGWI ACGGA 1 cut(s) 61
TspRI CASTG 3 cut(s) 153, 195, 586
Van91I CCANNNNNTGG 1 cut(s) 712
VpaK11BI GGWCC 1 cut(s) 50
XapI RAATTY 3 cut(s) 359, 388, 871
XceI RCATGY 1 cut(s) 428
XspI CTAG 2 cut(s) 455, 606
Zsp2I ATGCAT 1 cut(s) 426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.