Rmu_sc0001060.1_g000008

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001060.1
OG0000187
Physical Location & Seq
Forward (+)
27224 .. 28518
1295 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001060.1_g000008.1.cds

Sequence Viewer

Length: 1179 bp
atgagttctgttgatgccatggctgctaggctagtatcctcgcttgctatcgctgaggtaagaaacaggtggatctccggcctacacaaggtcaaggtggaggaggcagaggggcagagggtgttgttcacattgtcggatccttcagatcgggttcgtatttggaagggcgctccatgggggtataatcatgaaccggtggcattggcttgttataacggtgtcacacctgtggagaaggtccctctgaccatggcttcatactggataaccctccaagatattcctccggctttcagatccgaaagggtgatgactatgattgggtacacccttggggattttcaggagattgacaaggttgggaagaaggccggcaaactccgcatccgagtggagattctgctgaccaagccgctgcccttcaagtggtgctactgggtggaggacgaggtcgagttcctgtgtaagtttaaatatgataaactgtttggtcgttgctccatctgtggcttggtgattcacgttggcctaccttgctcagggccagcgctggagaaagatgaggatggggcggagaggactgttttaggggcacaacaagcagctgcagcgccagtgatggctagagtggtaaaactacagtcgggggcttccagttcggggtggcctgctgccagtgtctcgggattgcaagctagggctttggctcatagtcaaaccctagtcttcaagactcctcttccaagtacaatttcggaaccaactctgagttccttcttgactagacctcgatgtcaagtggtgattcgagagttgcaagaagatgccatgacaccggaaaggattactgggaagcgtagaggttgctttgatgatggggtgactatatctccaaagaaactgaaacttagtttggctgtgggcaagcgcaacctgaatttggagccgaaaagccttggcttggttcctatgctggaggaaggtagctcaggaagtggaaagaggaagcgagcccgtcctgtgggcaatagaaacaaattgccatatggggagaagaaaaaagttgcattgcttggggaggttgtgaaagagaagaaagcctctaaggagaaagtgaagaaggtatctgatggtatgagctccaactcgaaagggaaggaactagttatttactaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

392

Amino Acids

43.08

Weight (kDa)

9.63

Isoelectric Point (pI)

40.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Style Settings
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000187)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20170 FvH4_4g06831
rosa_chinensis RchiOBHm_Chr1g0321991 RchiOBHm_Chr2g0161811
rosa_laevigata RLG00000015375 RLG00000018377
rosa_multiflora Rmu_co8011754.1_g000001 Rmu_co8019986.1_g000001 Rmu_co8067766.1_g000001 Rmu_co8156128.1_g000001 Rmu_co8219154.1_g000003 Rmu_co8297235.1_g000001 Rmu_co8345223.1_g000001 Rmu_co8364775.1_g000001 Rmu_co8465075.1_g000001 Rmu_sc0000007.1_g000002 Rmu_sc0000054.1_g000015 Rmu_sc0000054.1_g000023 Rmu_sc0000145.1_g000010 Rmu_sc0000166.1_g000006 Rmu_sc0000218.1_g000012 Rmu_sc0000339.1_g000008 Rmu_sc0000342.1_g000015 Rmu_sc0000464.1_g000008 Rmu_sc0000620.1_g000003 Rmu_sc0000638.1_g000017 Rmu_sc0000890.1_g000007 Rmu_sc0000894.1_g000024 Rmu_sc0000909.1_g000010 Rmu_sc0000928.1_g000020 Rmu_sc0000977.1_g000007 Rmu_sc0001022.1_g000003 Rmu_sc0001035.1_g000037 Rmu_sc0001060.1_g000008 Rmu_sc0001168.1_g000005 Rmu_sc0001173.1_g000022 Rmu_sc0001179.1_g000016 Rmu_sc0001408.1_g000003 Rmu_sc0001455.1_g000005 Rmu_sc0001484.1_g000008 Rmu_sc0001585.1_g000010 Rmu_sc0001702.1_g000030 Rmu_sc0001755.1_g000063 Rmu_sc0001903.1_g000009 Rmu_sc0002099.1_g000001 Rmu_sc0002142.1_g000012 Rmu_sc0002158.1_g000014 Rmu_sc0002307.1_g000009 Rmu_sc0002358.1_g000013 Rmu_sc0002421.1_g000002 Rmu_sc0002426.1_g000003 Rmu_sc0002438.1_g000001 Rmu_sc0002461.1_g000001 Rmu_sc0002508.1_g000003 Rmu_sc0002532.1_g000056 Rmu_sc0002583.1_g000002 Rmu_sc0002927.1_g000033 Rmu_sc0003033.1_g000040 Rmu_sc0003271.1_g000006 Rmu_sc0003381.1_g000006 Rmu_sc0003507.1_g000007 Rmu_sc0003578.1_g000003 Rmu_sc0003693.1_g000004 Rmu_sc0003693.1_g000005 Rmu_sc0003704.1_g000003 Rmu_sc0003840.1_g000002 Rmu_sc0004084.1_g000026 Rmu_sc0004193.1_g000007 Rmu_sc0004234.1_g000033 Rmu_sc0004235.1_g000025 Rmu_sc0004435.1_g000006 Rmu_sc0004727.1_g000003 Rmu_sc0004741.1_g000001 Rmu_sc0004926.1_g000004 Rmu_sc0005365.1_g000001 Rmu_sc0005392.1_g000007 Rmu_sc0005415.1_g000001 Rmu_sc0005539.1_g000007 Rmu_sc0005708.1_g000017 Rmu_sc0006317.1_g000007 Rmu_sc0006453.1_g000054 Rmu_sc0006536.1_g000004 Rmu_sc0006740.1_g000022 Rmu_sc0006763.1_g000012 Rmu_sc0007115.1_g000002 Rmu_sc0007115.1_g000010 Rmu_sc0007129.1_g000017 Rmu_sc0007131.1_g000010 Rmu_sc0008373.1_g000008 Rmu_sc0009005.1_g000008 Rmu_sc0009252.1_g000007 Rmu_sc0009599.1_g000022 Rmu_sc0009785.1_g000027 Rmu_sc0009891.1_g000003 Rmu_sc0010099.1_g000010 Rmu_sc0010266.1_g000008 Rmu_sc0010334.1_g000003 Rmu_sc0010381.1_g000001 Rmu_sc0010496.1_g000003 Rmu_sc0010496.1_g000004 Rmu_sc0010546.1_g000003 Rmu_sc0011482.1_g000006 Rmu_sc0011875.1_g000010 Rmu_sc0011917.1_g000006 Rmu_sc0012293.1_g000004 Rmu_sc0012847.1_g000003 Rmu_sc0013773.1_g000001 Rmu_sc0016060.1_g000003 Rmu_sc0016170.1_g000013 Rmu_sc0016393.1_g000002 Rmu_sc0017589.1_g000001 Rmu_sc0017786.1_g000005 Rmu_sc0018326.1_g000002 Rmu_sc0020760.1_g000001 Rmu_sc0021262.1_g000003 Rmu_sc0023851.1_g000002 Rmu_sc0024044.1_g000001 Rmu_sc0026820.1_g000001 Rmu_sc0032306.1_g000001 Rmu_sc0035666.1_g000001 Rmu_sc0036881.1_g000001 Rmu_sc0037030.1_g000001 Rmu_sc0037158.1_g000001 Rmu_ssc0000016.1_g000002 Rmu_ssc0000044.1_g000012 Rmu_ssc0000044.1_g000014 Rmu_ssc0000050.1_g000064 Rmu_ssc0000064.1_g000022 Rmu_ssc0000154.1_g000037 Rmu_ssc0000178.1_g000013 Rmu_ssc0000217.1_g000022 Rmu_ssc0000392.1_g000004
rosa_roxburghii Rroxscaffold_3G00242000 Rroxscaffold_3G00242530 Rroxscaffold_6G00406010
rosa_rugosa Rorug01G0062000 Rorug02G0224000 Rorug02G0262900 Rorug02G0263000 Rorug02G0358900 Rorug02G0360500 Rorug02G0378500.1 Rorug02G0378600 Rorug02G0394700 Rorug03G0122900 Rorug03G0254600 Rorug03G0254700 Rorug03G0254800 Rorug04G0042200.1 Rorug04G0378100 Rorug05G0053400 Rorug05G0238600 Rorug05G0364500 Rorug05G0562000 Rorug06G0089300 Rorug06G0089400 Rorug06G0145700 Rorug07G0111600 Rorug07G0229500.1 Rorug07G0287600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 216
AasI GACNNNNNNGTC 1 cut(s) 795
AciI CCGC 3 cut(s) 385, 416, 575
AclWI GGATC 4 cut(s) 80, 134, 147, 294
AcsI RAATTY 1 cut(s) 940
AcuI CTGAAG 1 cut(s) 129
AfaI GTAC 2 cut(s) 329, 751
AfeI AGCGCT 1 cut(s) 552
AfiI CCNNNNNNNGG 7 cut(s) 88, 429, 542, 663, 943, 964, 1024
AgeI ACCGGT 1 cut(s) 196
AgsI TTSAA 2 cut(s) 427, 733
AhlI ACTAGT 1 cut(s) 1165
AjuI GAANNNNNNNTTGG 6 cut(s) 739, 757, 771, 789, 899, 931
AleI CACNNNNGTG 1 cut(s) 230
AluBI AGCT 4 cut(s) 608, 698, 990, 1143
AluI AGCT 4 cut(s) 608, 698, 990, 1143
Alw21I GWGCWC 1 cut(s) 1145
Alw26I GTCTC 1 cut(s) 688
AlwI GGATC 4 cut(s) 80, 134, 147, 294
Ama87I CYCGRG 1 cut(s) 685
Aor51HI AGCGCT 1 cut(s) 552
AoxI GGCC 5 cut(s) 79, 372, 529, 545, 668
ApeKI GCWGC 6 cut(s) 23, 418, 605, 608, 611, 674
ApoI RAATTY 1 cut(s) 940
AsiGI ACCGGT 1 cut(s) 196
AspLEI GCGC 4 cut(s) 173, 553, 616, 933
AspS9I GGNCC 2 cut(s) 241, 545
AsuHPI GGTGA 4 cut(s) 322, 529, 817, 895
AvaI CYCGRG 1 cut(s) 685
AvaII GGWCC 1 cut(s) 241
BaeGI GKGCMC 1 cut(s) 598
BamHI GGATCC 1 cut(s) 139
BanII GRGCYC 2 cut(s) 1018, 1145
BbsI GAAGAC 1 cut(s) 721
Bbv12I GWGCWC 1 cut(s) 1145
BbvCI CCTCAGC 1 cut(s) 54
BbvI GCAGC 6 cut(s) 10, 405, 595, 617, 623, 661
BccI CCATC 5 cut(s) 512, 563, 616, 872, 1127
BciVI GTATCC 1 cut(s) 46
BcoDI GTCTC 1 cut(s) 688
BcuI ACTAGT 1 cut(s) 1165
BfaI CTAG 7 cut(s) 27, 32, 627, 699, 725, 786, 1166
BfmI CTRYAG 2 cut(s) 609, 641
BfoI RGCGCY 3 cut(s) 174, 554, 617
BfuI GTATCC 1 cut(s) 46
BisI GCNGC 7 cut(s) 24, 416, 419, 606, 609, 612, 675
BlsI GCNGC 7 cut(s) 25, 417, 420, 607, 610, 613, 676
Bme18I GGWCC 1 cut(s) 241
BmeT110I CYCGRG 1 cut(s) 685
BmgT120I GGNCC 2 cut(s) 241, 545
BmiI GGNNCC 5 cut(s) 141, 243, 762, 948, 969
BmrI ACTGGG 2 cut(s) 448, 861
BmsI GCATC 3 cut(s) 4, 396, 817
BmuI ACTGGG 2 cut(s) 448, 861
BpiI GAAGAC 1 cut(s) 721
BpmI CTGGAG 2 cut(s) 575, 998
Bpu10I CCTNAGC 3 cut(s) 54, 541, 991
BsaJI CCNNGG 5 cut(s) 18, 176, 252, 334, 958
BsaWI WCCGGW 2 cut(s) 196, 838
BsaXI ACNNNNNCTCC 2 cut(s) 877, 907
Bsc4I CCNNNNNNNGG 7 cut(s) 88, 429, 542, 663, 943, 964, 1024
Bse118I RCCGGY 2 cut(s) 196, 374
Bse1I ACTGG 6 cut(s) 269, 443, 617, 657, 678, 856
Bse3DI GCAATG 1 cut(s) 1070
BseDI CCNNGG 5 cut(s) 18, 176, 252, 334, 958
BseGI GGATG 2 cut(s) 387, 574
BseLI CCNNNNNNNGG 7 cut(s) 88, 429, 542, 663, 943, 964, 1024
BseMI GCAATG 1 cut(s) 1070
BseMII CTCAG 4 cut(s) 45, 555, 761, 1005
BseNI ACTGG 6 cut(s) 269, 443, 617, 657, 678, 856
BseRI GAGGAG 2 cut(s) 116, 729
BseSI GKGCMC 1 cut(s) 598
BseXI GCAGC 6 cut(s) 10, 405, 595, 617, 623, 661
BshFI GGCC 5 cut(s) 81, 374, 531, 547, 670
BshTI ACCGGT 1 cut(s) 196
BsiHKAI GWGCWC 1 cut(s) 1145
BsiHKCI CYCGRG 1 cut(s) 685
BsiSI CCGG 5 cut(s) 78, 197, 290, 375, 839
BslFI GGGAC 1 cut(s) 227
BslI CCNNNNNNNGG 7 cut(s) 88, 429, 542, 663, 943, 964, 1024
BsmAI GTCTC 1 cut(s) 688
BsmFI GGGAC 1 cut(s) 227
BsnI GGCC 5 cut(s) 81, 374, 531, 547, 670
BsoBI CYCGRG 1 cut(s) 685
Bsp1286I GDGCHC 3 cut(s) 598, 1018, 1145
Bsp143I GATC 4 cut(s) 72, 139, 148, 299
Bsp19I CCATGG 3 cut(s) 18, 176, 252
BspACI CCGC 3 cut(s) 385, 416, 575
BspANI GGCC 5 cut(s) 81, 374, 531, 547, 670
BspCNI CTCAG 4 cut(s) 46, 554, 762, 1004
BspHI TCATGA 1 cut(s) 190
BspLI GGNNCC 5 cut(s) 141, 243, 762, 948, 969
BspMAI CTGCAG 1 cut(s) 613
BspPI GGATC 4 cut(s) 80, 134, 147, 294
BsrDI GCAATG 1 cut(s) 1070
BsrFI RCCGGY 2 cut(s) 196, 374
BsrI ACTGG 6 cut(s) 269, 443, 617, 657, 678, 856
BssAI RCCGGY 2 cut(s) 196, 374
BssECI CCNNGG 5 cut(s) 18, 176, 252, 334, 958
BssMI GATC 4 cut(s) 72, 139, 148, 299
BssT1I CCWWGG 5 cut(s) 18, 176, 252, 334, 958
Bst4CI ACNGT 4 cut(s) 221, 489, 586, 645
Bst6I CTCTTC 1 cut(s) 747
BstC8I GCNNGC 7 cut(s) 45, 376, 549, 672, 696, 929, 1014
BstDEI CTNAG 6 cut(s) 54, 541, 770, 911, 991, 1107
BstDSI CCRYGG 3 cut(s) 18, 176, 252
BstENI CCTNNNNNAGG 2 cut(s) 86, 540
BstF5I GGATG 2 cut(s) 387, 574
BstH2I RGCGCY 3 cut(s) 174, 554, 617
BstHHI GCGC 4 cut(s) 173, 553, 616, 933
BstKTI GATC 4 cut(s) 75, 142, 151, 302
BstMAI GTCTC 1 cut(s) 688
BstMBI GATC 4 cut(s) 72, 139, 148, 299
BstMWI GCNNNNNNNGC 6 cut(s) 23, 384, 412, 537, 602, 611
BstSFI CTRYAG 2 cut(s) 609, 641
BstSLI GKGCMC 1 cut(s) 598
BstV1I GCAGC 6 cut(s) 10, 405, 595, 617, 623, 661
BstV2I GAAGAC 1 cut(s) 721
BstX2I RGATCY 3 cut(s) 72, 139, 299
BstYI RGATCY 3 cut(s) 72, 139, 299
BsuI GTATCC 1 cut(s) 46
BsuRI GGCC 5 cut(s) 81, 374, 531, 547, 670
BtgI CCRYGG 3 cut(s) 18, 176, 252
BtsCI GGATG 2 cut(s) 387, 574
BtsIMutI CAGTG 2 cut(s) 624, 685
Cac8I GCNNGC 7 cut(s) 45, 376, 549, 672, 696, 929, 1014
CciI TCATGA 1 cut(s) 190
CfoI GCGC 4 cut(s) 173, 553, 616, 933
Cfr10I RCCGGY 2 cut(s) 196, 374
Cfr13I GGNCC 2 cut(s) 241, 545
Csp6I GTAC 2 cut(s) 328, 750
CspAI ACCGGT 1 cut(s) 196
CviAII CATG 5 cut(s) 19, 177, 191, 253, 832
CviQI GTAC 2 cut(s) 328, 750
DdeI CTNAG 6 cut(s) 54, 541, 770, 911, 991, 1107
DpnI GATC 4 cut(s) 74, 141, 150, 301
DpnII GATC 4 cut(s) 72, 139, 148, 299
DraI TTTAAA 1 cut(s) 475
DrdI GACNNNNNNGTC 1 cut(s) 795
DseDI GACNNNNNNGTC 1 cut(s) 795
Eam1104I CTCTTC 1 cut(s) 747
EarI CTCTTC 1 cut(s) 747
EciI GGCGGA 1 cut(s) 590
Ecl136II GAGCTC 1 cut(s) 1143
Eco130I CCWWGG 5 cut(s) 18, 176, 252, 334, 958
Eco24I GRGCYC 2 cut(s) 1018, 1145
Eco47I GGWCC 1 cut(s) 241
Eco47III AGCGCT 1 cut(s) 552
Eco53kI GAGCTC 1 cut(s) 1143
Eco57I CTGAAG 1 cut(s) 129
Eco88I CYCGRG 1 cut(s) 685
EcoICRI GAGCTC 1 cut(s) 1143
EcoNI CCTNNNNNAGG 2 cut(s) 86, 540
EcoO109I RGGNCCY 1 cut(s) 241
EcoT14I CCWWGG 5 cut(s) 18, 176, 252, 334, 958
EcoT38I GRGCYC 2 cut(s) 1018, 1145
ErhI CCWWGG 5 cut(s) 18, 176, 252, 334, 958
FaeI CATG 5 cut(s) 22, 180, 194, 256, 835
FaqI GGGAC 1 cut(s) 227
FatI CATG 5 cut(s) 18, 176, 190, 252, 831
FauNDI CATATG 1 cut(s) 1048
Fnu4HI GCNGC 7 cut(s) 24, 416, 419, 606, 609, 612, 675
FokI GGATG 2 cut(s) 374, 581
FriOI GRGCYC 2 cut(s) 1018, 1145
Fsp4HI GCNGC 7 cut(s) 24, 416, 419, 606, 609, 612, 675
FspBI CTAG 7 cut(s) 27, 32, 627, 699, 725, 786, 1166
GlaI GCGC 4 cut(s) 172, 552, 615, 932
GluI GCNGC 7 cut(s) 24, 416, 419, 606, 609, 612, 675
GsuI CTGGAG 2 cut(s) 575, 998
HaeII RGCGCY 3 cut(s) 174, 554, 617
HaeIII GGCC 5 cut(s) 81, 374, 531, 547, 670
HapII CCGG 5 cut(s) 78, 197, 290, 375, 839
HhaI GCGC 4 cut(s) 173, 553, 616, 933
Hin1II CATG 5 cut(s) 22, 180, 194, 256, 835
Hin6I GCGC 4 cut(s) 171, 551, 614, 931
HinP1I GCGC 4 cut(s) 171, 551, 614, 931
HinfI GANTC 4 cut(s) 400, 520, 736, 808
HpaII CCGG 5 cut(s) 78, 197, 290, 375, 839
HphI GGTGA 4 cut(s) 322, 529, 817, 895
Hpy166II GTNNAC 2 cut(s) 129, 330
Hpy188I TCNGA 9 cut(s) 139, 148, 249, 299, 304, 392, 760, 771, 1132
Hpy188III TCNNGA 7 cut(s) 191, 347, 687, 733, 781, 812, 993
Hpy8I GTNNAC 2 cut(s) 129, 330
HpyAV CCTTC 9 cut(s) 153, 160, 232, 364, 433, 787, 977, 1117, 1153
HpyCH4III ACNGT 4 cut(s) 221, 489, 586, 645
HpyCH4IV ACGT 1 cut(s) 525
HpyCH4V TGCA 4 cut(s) 611, 694, 820, 1070
HpyF10VI GCNNNNNNNGC 6 cut(s) 23, 384, 412, 537, 602, 611
HpyF3I CTNAG 6 cut(s) 54, 541, 770, 911, 991, 1107
HpySE526I ACGT 1 cut(s) 525
Hsp92II CATG 5 cut(s) 22, 180, 194, 256, 835
HspAI GCGC 4 cut(s) 171, 551, 614, 931
KroI GCCGGC 1 cut(s) 374
KroNI GCCGGC 1 cut(s) 376
Kzo9I GATC 4 cut(s) 72, 139, 148, 299
LmnI GCTCC 4 cut(s) 178, 506, 946, 1148
Lsp1109I GCAGC 6 cut(s) 10, 405, 595, 617, 623, 661
LweI GCATC 3 cut(s) 4, 396, 817
MaeI CTAG 7 cut(s) 27, 32, 627, 699, 725, 786, 1166
MaeII ACGT 1 cut(s) 525
MaeIII GTNAC 2 cut(s) 223, 883
MalI GATC 4 cut(s) 74, 141, 150, 301
MboI GATC 4 cut(s) 72, 139, 148, 299
MboII GAAGA 7 cut(s) 379, 721, 734, 836, 1069, 1108, 1132
MflI RGATCY 3 cut(s) 72, 139, 299
MhlI GDGCHC 3 cut(s) 598, 1018, 1145
MluCI AATT 3 cut(s) 753, 940, 1040
MlyI GAGTC 1 cut(s) 730
MmeI TCCRAC 2 cut(s) 117, 1170
MroNI GCCGGC 1 cut(s) 374
MseI TTAA 1 cut(s) 474
MslI CAYNNNNRTG 2 cut(s) 230, 392
MspA1I CMGCKG 2 cut(s) 418, 608
MspI CCGG 5 cut(s) 78, 197, 290, 375, 839
MwoI GCNNNNNNNGC 6 cut(s) 23, 384, 412, 537, 602, 611
NaeI GCCGGC 1 cut(s) 376
NcoI CCATGG 3 cut(s) 18, 176, 252
NdeI CATATG 1 cut(s) 1048
NdeII GATC 4 cut(s) 72, 139, 148, 299
NgoMIV GCCGGC 1 cut(s) 374
NlaIII CATG 5 cut(s) 22, 180, 194, 256, 835
NlaIV GGNNCC 5 cut(s) 141, 243, 762, 948, 969
NmuCI GTSAC 2 cut(s) 223, 883
OliI CACNNNNGTG 1 cut(s) 230
PagI TCATGA 1 cut(s) 190
PdiI GCCGGC 1 cut(s) 376
PfeI GAWTC 3 cut(s) 400, 520, 808
PflFI GACNNNGTC 1 cut(s) 452
PinAI ACCGGT 1 cut(s) 196
PkrI GCNGC 7 cut(s) 25, 417, 420, 607, 610, 613, 676
PleI GAGTC 1 cut(s) 730
PpsI GAGTC 1 cut(s) 730
PpuMI RGGWCCY 1 cut(s) 241
PsiI TTATAA 1 cut(s) 216
Psp124BI GAGCTC 1 cut(s) 1145
Psp5II RGGWCCY 1 cut(s) 241
PspN4I GGNNCC 5 cut(s) 141, 243, 762, 948, 969
PspPI GGNCC 2 cut(s) 241, 545
PspPPI RGGWCCY 1 cut(s) 241
PstI CTGCAG 1 cut(s) 613
PsuI RGATCY 3 cut(s) 72, 139, 299
PsyI GACNNNGTC 1 cut(s) 452
PvuII CAGCTG 1 cut(s) 608
RsaI GTAC 2 cut(s) 329, 751
RsaNI GTAC 2 cut(s) 328, 750
RseI CAYNNNNRTG 2 cut(s) 230, 392
SacI GAGCTC 1 cut(s) 1145
SaqAI TTAA 1 cut(s) 474
SatI GCNGC 7 cut(s) 24, 416, 419, 606, 609, 612, 675
Sau3AI GATC 4 cut(s) 72, 139, 148, 299
Sau96I GGNCC 2 cut(s) 241, 545
SchI GAGTC 1 cut(s) 730
SduI GDGCHC 3 cut(s) 598, 1018, 1145
SfaNI GCATC 3 cut(s) 4, 396, 817
SfcI CTRYAG 2 cut(s) 609, 641
SinI GGWCC 1 cut(s) 241
SmiMI CAYNNNNRTG 2 cut(s) 230, 392
SpeI ACTAGT 1 cut(s) 1165
Sse9I AATT 3 cut(s) 753, 940, 1040
SsiI CCGC 3 cut(s) 385, 416, 575
SspMI CTAG 7 cut(s) 27, 32, 627, 699, 725, 786, 1166
SstI GAGCTC 1 cut(s) 1145
StyI CCWWGG 5 cut(s) 18, 176, 252, 334, 958
TaaI ACNGT 4 cut(s) 221, 489, 586, 645
TaiI ACGT 1 cut(s) 528
TaqI TCGA 4 cut(s) 456, 793, 811, 1151
TasI AATT 3 cut(s) 753, 940, 1040
TatI WGTACW 1 cut(s) 749
TauI GCSGC 1 cut(s) 418
TfiI GAWTC 3 cut(s) 400, 520, 808
Tru1I TTAA 1 cut(s) 474
Tru9I TTAA 1 cut(s) 474
TscAI CASTG 2 cut(s) 624, 685
TseFI GTSAC 2 cut(s) 223, 883
TseI GCWGC 6 cut(s) 23, 418, 605, 608, 611, 674
Tsp45I GTSAC 2 cut(s) 223, 883
TspDTI ATGAA 2 cut(s) 207, 249
TspRI CASTG 2 cut(s) 624, 685
Tth111I GACNNNGTC 1 cut(s) 452
VpaK11BI GGWCC 1 cut(s) 241
XagI CCTNNNNNAGG 2 cut(s) 86, 540
XapI RAATTY 1 cut(s) 940
XcmI CCANNNNNNNNNTGG 1 cut(s) 511
XspI CTAG 7 cut(s) 27, 32, 627, 699, 725, 786, 1166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.