ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 361 |
| Acc36I | ACCTGC | 2 cut(s) | 361, 595 |
| Acc65I | GGTACC | 1 cut(s) | 304 |
| AccB1I | GGYRCC | 1 cut(s) | 304 |
| AccBSI | CCGCTC | 1 cut(s) | 201 |
| AccI | GTMKAC | 1 cut(s) | 392 |
| AciI | CCGC | 7 cut(s) | 199, 308, 401, 527, 530, 554, 581 |
| AclWI | GGATC | 2 cut(s) | 338, 724 |
| AcoI | YGGCCR | 1 cut(s) | 582 |
| AcuI | CTGAAG | 2 cut(s) | 171, 663 |
| AcyI | GRCGYC | 1 cut(s) | 597 |
| AfaI | GTAC | 3 cut(s) | 306, 562, 628 |
| AfeI | AGCGCT | 1 cut(s) | 18 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 214, 220, 327, 521, 628 |
| AflIII | ACRYGT | 1 cut(s) | 502 |
| AgsI | TTSAA | 5 cut(s) | 44, 193, 473, 688, 709 |
| AjiI | CACGTC | 1 cut(s) | 576 |
| AjnI | CCWGG | 1 cut(s) | 621 |
| AluBI | AGCT | 2 cut(s) | 50, 699 |
| AluI | AGCT | 2 cut(s) | 50, 699 |
| AlwI | GGATC | 2 cut(s) | 338, 724 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 641 |
| Ama87I | CYCGRG | 1 cut(s) | 520 |
| Aor51HI | AGCGCT | 1 cut(s) | 18 |
| AoxI | GGCC | 3 cut(s) | 524, 582, 591 |
| ApeKI | GCWGC | 3 cut(s) | 47, 651, 662 |
| Asp718I | GGTACC | 1 cut(s) | 304 |
| AspLEI | GCGC | 2 cut(s) | 19, 238 |
| AspS9I | GGNCC | 3 cut(s) | 196, 524, 619 |
| AsuC2I | CCSGG | 2 cut(s) | 215, 734 |
| AsuHPI | GGTGA | 1 cut(s) | 325 |
| AvaI | CYCGRG | 1 cut(s) | 520 |
| AvaII | GGWCC | 2 cut(s) | 196, 619 |
| BaeGI | GKGCMC | 1 cut(s) | 575 |
| BanI | GGYRCC | 1 cut(s) | 304 |
| BbvI | GCAGC | 3 cut(s) | 59, 649, 663 |
| BccI | CCATC | 1 cut(s) | 275 |
| BciT130I | CCWGG | 1 cut(s) | 623 |
| BciVI | GTATCC | 1 cut(s) | 461 |
| BcnI | CCSGG | 2 cut(s) | 215, 734 |
| BfaI | CTAG | 4 cut(s) | 9, 51, 209, 219 |
| BfoI | RGCGCY | 1 cut(s) | 20 |
| BfuAI | ACCTGC | 2 cut(s) | 361, 595 |
| BfuI | GTATCC | 1 cut(s) | 461 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 590 |
| BisI | GCNGC | 6 cut(s) | 48, 527, 530, 582, 652, 663 |
| BlsI | GCNGC | 6 cut(s) | 49, 528, 531, 583, 653, 664 |
| Bme1390I | CCNGG | 3 cut(s) | 215, 623, 734 |
| Bme18I | GGWCC | 2 cut(s) | 196, 619 |
| BmeT110I | CYCGRG | 1 cut(s) | 520 |
| BmgBI | CACGTC | 1 cut(s) | 576 |
| BmgT120I | GGNCC | 3 cut(s) | 196, 524, 619 |
| BmiI | GGNNCC | 3 cut(s) | 306, 525, 620 |
| BmrFI | CCNGG | 3 cut(s) | 215, 623, 734 |
| BmsI | GCATC | 3 cut(s) | 541, 649, 748 |
| Bpu10I | CCTNAGC | 1 cut(s) | 183 |
| BpuMI | CCSGG | 2 cut(s) | 215, 734 |
| BsaHI | GRCGYC | 1 cut(s) | 597 |
| BsaJI | CCNNGG | 4 cut(s) | 239, 253, 396, 622 |
| BsaWI | WCCGGW | 1 cut(s) | 453 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 214, 220, 327, 521, 628 |
| Bse118I | RCCGGY | 1 cut(s) | 593 |
| BseBI | CCWGG | 1 cut(s) | 623 |
| BseDI | CCNNGG | 4 cut(s) | 239, 253, 396, 622 |
| BseGI | GGATG | 1 cut(s) | 362 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 214, 220, 327, 521, 628 |
| BseMII | CTCAG | 1 cut(s) | 264 |
| BseRI | GAGGAG | 1 cut(s) | 98 |
| BseSI | GKGCMC | 1 cut(s) | 575 |
| BseXI | GCAGC | 3 cut(s) | 59, 649, 663 |
| BsgI | GTGCAG | 1 cut(s) | 788 |
| BshFI | GGCC | 3 cut(s) | 526, 584, 593 |
| BshNI | GGYRCC | 1 cut(s) | 304 |
| BsiHKCI | CYCGRG | 1 cut(s) | 520 |
| BsiSI | CCGG | 4 cut(s) | 214, 454, 594, 734 |
| BslFI | GGGAC | 1 cut(s) | 632 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 214, 220, 327, 521, 628 |
| BsmFI | GGGAC | 1 cut(s) | 632 |
| BsnI | GGCC | 3 cut(s) | 526, 584, 593 |
| BsoBI | CYCGRG | 1 cut(s) | 520 |
| Bsp1286I | GDGCHC | 1 cut(s) | 575 |
| Bsp143I | GATC | 3 cut(s) | 94, 330, 729 |
| Bsp19I | CCATGG | 1 cut(s) | 239 |
| BspACI | CCGC | 7 cut(s) | 199, 308, 401, 527, 530, 554, 581 |
| BspANI | GGCC | 3 cut(s) | 526, 584, 593 |
| BspCNI | CTCAG | 1 cut(s) | 265 |
| BspLI | GGNNCC | 3 cut(s) | 306, 525, 620 |
| BspMI | ACCTGC | 2 cut(s) | 361, 595 |
| BspPI | GGATC | 2 cut(s) | 338, 724 |
| BspT107I | GGYRCC | 1 cut(s) | 304 |
| BsrBI | CCGCTC | 1 cut(s) | 201 |
| BsrFI | RCCGGY | 1 cut(s) | 593 |
| BssAI | RCCGGY | 1 cut(s) | 593 |
| BssECI | CCNNGG | 4 cut(s) | 239, 253, 396, 622 |
| BssMI | GATC | 3 cut(s) | 94, 330, 729 |
| BssNAI | GTATAC | 1 cut(s) | 393 |
| BssNI | GRCGYC | 1 cut(s) | 597 |
| BssT1I | CCWWGG | 2 cut(s) | 239, 396 |
| Bst1107I | GTATAC | 1 cut(s) | 393 |
| Bst2UI | CCWGG | 1 cut(s) | 623 |
| Bst4CI | ACNGT | 2 cut(s) | 254, 565 |
| BstACI | GRCGYC | 1 cut(s) | 597 |
| BstC8I | GCNNGC | 3 cut(s) | 512, 591, 595 |
| BstDEI | CTNAG | 2 cut(s) | 183, 273 |
| BstDSI | CCRYGG | 2 cut(s) | 239, 253 |
| BstF5I | GGATG | 1 cut(s) | 362 |
| BstH2I | RGCGCY | 1 cut(s) | 20 |
| BstHHI | GCGC | 2 cut(s) | 19, 238 |
| BstKTI | GATC | 3 cut(s) | 97, 333, 732 |
| BstMBI | GATC | 3 cut(s) | 94, 330, 729 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 14, 516, 590 |
| BstNI | CCWGG | 1 cut(s) | 623 |
| BstSCI | CCNGG | 3 cut(s) | 213, 621, 732 |
| BstSLI | GKGCMC | 1 cut(s) | 575 |
| BstV1I | GCAGC | 3 cut(s) | 59, 649, 663 |
| BstZ17I | GTATAC | 1 cut(s) | 393 |
| BsuI | GTATCC | 1 cut(s) | 461 |
| BsuRI | GGCC | 3 cut(s) | 526, 584, 593 |
| BtgI | CCRYGG | 2 cut(s) | 239, 253 |
| BtrI | CACGTC | 1 cut(s) | 576 |
| BtsCI | GGATG | 1 cut(s) | 362 |
| BtsIMutI | CAGTG | 1 cut(s) | 570 |
| BveI | ACCTGC | 2 cut(s) | 361, 595 |
| Cac8I | GCNNGC | 3 cut(s) | 512, 591, 595 |
| CaiI | CAGNNNCTG | 1 cut(s) | 641 |
| CfoI | GCGC | 2 cut(s) | 19, 238 |
| Cfr10I | RCCGGY | 1 cut(s) | 593 |
| Cfr13I | GGNCC | 3 cut(s) | 196, 524, 619 |
| CseI | GACGC | 1 cut(s) | 586 |
| Csp6I | GTAC | 3 cut(s) | 305, 561, 627 |
| CviAII | CATG | 7 cut(s) | 160, 240, 260, 516, 586, 601, 656 |
| CviQI | GTAC | 3 cut(s) | 305, 561, 627 |
| DdeI | CTNAG | 2 cut(s) | 183, 273 |
| DpnI | GATC | 3 cut(s) | 96, 332, 731 |
| DpnII | GATC | 3 cut(s) | 94, 330, 729 |
| EaeI | YGGCCR | 1 cut(s) | 582 |
| EciI | GGCGGA | 1 cut(s) | 416 |
| Eco130I | CCWWGG | 2 cut(s) | 239, 396 |
| Eco47I | GGWCC | 2 cut(s) | 196, 619 |
| Eco47III | AGCGCT | 1 cut(s) | 18 |
| Eco57I | CTGAAG | 2 cut(s) | 171, 663 |
| Eco88I | CYCGRG | 1 cut(s) | 520 |
| EcoO109I | RGGNCCY | 1 cut(s) | 619 |
| EcoRII | CCWGG | 1 cut(s) | 621 |
| EcoT14I | CCWWGG | 2 cut(s) | 239, 396 |
| ErhI | CCWWGG | 2 cut(s) | 239, 396 |
| FaeI | CATG | 7 cut(s) | 163, 243, 263, 519, 589, 604, 659 |
| FaqI | GGGAC | 1 cut(s) | 632 |
| FatI | CATG | 7 cut(s) | 159, 239, 259, 515, 585, 600, 655 |
| FblI | GTMKAC | 1 cut(s) | 392 |
| Fnu4HI | GCNGC | 6 cut(s) | 48, 527, 530, 582, 652, 663 |
| FokI | GGATG | 1 cut(s) | 349 |
| Fsp4HI | GCNGC | 6 cut(s) | 48, 527, 530, 582, 652, 663 |
| FspBI | CTAG | 4 cut(s) | 9, 51, 209, 219 |
| GlaI | GCGC | 2 cut(s) | 18, 237 |
| GluI | GCNGC | 6 cut(s) | 48, 527, 530, 582, 652, 663 |
| HaeII | RGCGCY | 1 cut(s) | 20 |
| HaeIII | GGCC | 3 cut(s) | 526, 584, 593 |
| HapII | CCGG | 4 cut(s) | 214, 454, 594, 734 |
| HgaI | GACGC | 1 cut(s) | 586 |
| HhaI | GCGC | 2 cut(s) | 19, 238 |
| Hin1I | GRCGYC | 1 cut(s) | 597 |
| Hin1II | CATG | 7 cut(s) | 163, 243, 263, 519, 589, 604, 659 |
| Hin6I | GCGC | 2 cut(s) | 17, 236 |
| HinP1I | GCGC | 2 cut(s) | 17, 236 |
| HinfI | GANTC | 2 cut(s) | 88, 809 |
| HpaII | CCGG | 4 cut(s) | 214, 454, 594, 734 |
| HphI | GGTGA | 1 cut(s) | 325 |
| Hpy166II | GTNNAC | 2 cut(s) | 25, 393 |
| Hpy188I | TCNGA | 4 cut(s) | 151, 367, 643, 814 |
| Hpy188III | TCNNGA | 2 cut(s) | 92, 410 |
| Hpy8I | GTNNAC | 2 cut(s) | 25, 393 |
| Hpy99I | CGWCG | 1 cut(s) | 580 |
| HpyAV | CCTTC | 5 cut(s) | 122, 214, 295, 427, 638 |
| HpyCH4III | ACNGT | 2 cut(s) | 254, 565 |
| HpyCH4IV | ACGT | 3 cut(s) | 335, 504, 575 |
| HpyCH4V | TGCA | 4 cut(s) | 589, 604, 651, 769 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 14, 516, 590 |
| HpyF3I | CTNAG | 2 cut(s) | 183, 273 |
| HpySE526I | ACGT | 3 cut(s) | 335, 504, 575 |
| Hsp92I | GRCGYC | 1 cut(s) | 597 |
| Hsp92II | CATG | 7 cut(s) | 163, 243, 263, 519, 589, 604, 659 |
| HspAI | GCGC | 2 cut(s) | 17, 236 |
| KpnI | GGTACC | 1 cut(s) | 308 |
| KroI | GCCGGC | 1 cut(s) | 593 |
| KroNI | GCCGGC | 1 cut(s) | 595 |
| Kzo9I | GATC | 3 cut(s) | 94, 330, 729 |
| LmnI | GCTCC | 3 cut(s) | 206, 556, 736 |
| Lsp1109I | GCAGC | 3 cut(s) | 59, 649, 663 |
| LweI | GCATC | 3 cut(s) | 541, 649, 748 |
| MaeI | CTAG | 4 cut(s) | 9, 51, 209, 219 |
| MaeII | ACGT | 3 cut(s) | 335, 504, 575 |
| MaeIII | GTNAC | 3 cut(s) | 336, 496, 749 |
| MalI | GATC | 3 cut(s) | 96, 332, 731 |
| MbiI | CCGCTC | 1 cut(s) | 201 |
| MboI | GATC | 3 cut(s) | 94, 330, 729 |
| MboII | GAAGA | 2 cut(s) | 118, 554 |
| MfeI | CAATTG | 3 cut(s) | 39, 120, 294 |
| MhlI | GDGCHC | 1 cut(s) | 575 |
| MluCI | AATT | 4 cut(s) | 39, 78, 120, 294 |
| MnlI | CCTC | 6 cut(s) | 76, 118, 127, 222, 331, 532 |
| MroNI | GCCGGC | 1 cut(s) | 593 |
| MseI | TTAA | 2 cut(s) | 77, 249 |
| MslI | CAYNNNNRTG | 1 cut(s) | 674 |
| MspA1I | CMGCKG | 2 cut(s) | 310, 532 |
| MspI | CCGG | 4 cut(s) | 214, 454, 594, 734 |
| MspR9I | CCNGG | 3 cut(s) | 215, 623, 734 |
| MunI | CAATTG | 3 cut(s) | 39, 120, 294 |
| MvaI | CCWGG | 1 cut(s) | 623 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 14, 516, 590 |
| NaeI | GCCGGC | 1 cut(s) | 595 |
| NciI | CCSGG | 2 cut(s) | 215, 734 |
| NcoI | CCATGG | 1 cut(s) | 239 |
| NdeII | GATC | 3 cut(s) | 94, 330, 729 |
| NgoMIV | GCCGGC | 1 cut(s) | 593 |
| NlaIII | CATG | 7 cut(s) | 163, 243, 263, 519, 589, 604, 659 |
| NlaIV | GGNNCC | 3 cut(s) | 306, 525, 620 |
| NmuCI | GTSAC | 1 cut(s) | 496 |
| PaqCI | CACCTGC | 1 cut(s) | 361 |
| PdiI | GCCGGC | 1 cut(s) | 595 |
| PfeI | GAWTC | 2 cut(s) | 88, 809 |
| PfoI | TCCNGGA | 1 cut(s) | 732 |
| PkrI | GCNGC | 6 cut(s) | 49, 528, 531, 583, 653, 664 |
| PpuMI | RGGWCCY | 1 cut(s) | 619 |
| Psp5II | RGGWCCY | 1 cut(s) | 619 |
| Psp6I | CCWGG | 1 cut(s) | 621 |
| PspGI | CCWGG | 1 cut(s) | 621 |
| PspN4I | GGNNCC | 3 cut(s) | 306, 525, 620 |
| PspPI | GGNCC | 3 cut(s) | 196, 524, 619 |
| PspPPI | RGGWCCY | 1 cut(s) | 619 |
| PstNI | CAGNNNCTG | 1 cut(s) | 641 |
| RsaI | GTAC | 3 cut(s) | 306, 562, 628 |
| RsaNI | GTAC | 3 cut(s) | 305, 561, 627 |
| RseI | CAYNNNNRTG | 1 cut(s) | 674 |
| SaqAI | TTAA | 2 cut(s) | 77, 249 |
| SatI | GCNGC | 6 cut(s) | 48, 527, 530, 582, 652, 663 |
| Sau3AI | GATC | 3 cut(s) | 94, 330, 729 |
| Sau96I | GGNCC | 3 cut(s) | 196, 524, 619 |
| ScrFI | CCNGG | 3 cut(s) | 215, 623, 734 |
| SduI | GDGCHC | 1 cut(s) | 575 |
| SfaNI | GCATC | 3 cut(s) | 541, 649, 748 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 590 |
| SinI | GGWCC | 2 cut(s) | 196, 619 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 674 |
| Sse9I | AATT | 4 cut(s) | 39, 78, 120, 294 |
| SsiI | CCGC | 7 cut(s) | 199, 308, 401, 527, 530, 554, 581 |
| SspMI | CTAG | 4 cut(s) | 9, 51, 209, 219 |
| StyD4I | CCNGG | 3 cut(s) | 213, 621, 732 |
| StyI | CCWWGG | 2 cut(s) | 239, 396 |
| TaaI | ACNGT | 2 cut(s) | 254, 565 |
| TaiI | ACGT | 3 cut(s) | 338, 507, 578 |
| TaqI | TCGA | 1 cut(s) | 97 |
| TasI | AATT | 4 cut(s) | 39, 78, 120, 294 |
| TauI | GCSGC | 3 cut(s) | 529, 532, 584 |
| TfiI | GAWTC | 2 cut(s) | 88, 809 |
| Tru1I | TTAA | 2 cut(s) | 77, 249 |
| Tru9I | TTAA | 2 cut(s) | 77, 249 |
| TscAI | CASTG | 1 cut(s) | 570 |
| TseFI | GTSAC | 1 cut(s) | 496 |
| TseI | GCWGC | 3 cut(s) | 47, 651, 662 |
| Tsp45I | GTSAC | 1 cut(s) | 496 |
| TspDTI | ATGAA | 2 cut(s) | 148, 672 |
| TspRI | CASTG | 1 cut(s) | 570 |
| VpaK11BI | GGWCC | 2 cut(s) | 196, 619 |
| XmiI | GTMKAC | 1 cut(s) | 392 |
| XspI | CTAG | 4 cut(s) | 9, 51, 209, 219 |