Rmu_sc0018326.1_g000002

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0018326.1
OG0000187
Physical Location & Seq
Reverse (-)
12218 .. 15802
3585 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0018326.1_g000002.1.cds

Sequence Viewer

Length: 1635 bp
atgtttatgttggggaagctgctgaccgctcgggagtacaagactcgctcctttatggggttgttccgcaatgcatggcgggtgaatggatcactaagggtggaggaagcggagggacagagggttctcatcactttgtcggacgctactggccgggatcggatctggaagggatctccatggggatataatcacgctccgattgccctagcttactatgatggtgtggcggccatggactcggtccctttcaccgtatcctcatactggattacactgcaaggaatccctcctgcgttccgctcggagagggtgatgactatgattaggtttacccttggtgatttcaaggagattgataaacaggccaagaaggttggaaagctccgaatcagggtggagatccctttcaaccggcctctgtccttccaacgctggtattgggtagaggatggggtcgagtttctctgcaagtttcagtttgataaactctttggtcgatgctcgatttgtggctatgttactcacgtaggtctaccttgctcgggacctccattggaggagaatgatgaggcagcacgcacggttctgggtgcgtcacagatggggcacactaactcgacctctggttcggcatcatctagcacagtgtgtgcaggaactcggactagggtttacatgggaggtccggatgtggtcttccgtactgtgcttcccaaccaactgccgaagcgattgcttcacaatccggcagtgctgatacaacgtccccgacgtccagctcatatcagagagctgcctgagatgatggctatcccagaaagtgttatagggcagaggagacaaagggaggaggatactatcatgatctctccaaagaagcttaagttgagcctagctgttggaaaaagaaacctgaatctggaaccagaacatctgggtttggtaccggtgatgcacaatgaggaacaacctattcaggtaaaaaggaaaagggggagacctgcaggtagtcggaacaagcaaccttatggtgaaaagaagaaagtaaagcaggggaacgagaatagggcagtaaagaaaaagctcctcccaaagctagacaaggcaggtggtggtacaggctccaacccgaaagggaaggagctggtgcagcaccacgtccatctgcgttgcgctcttgtcctcccaccacctgccgcaacaccgagatcggaaaactcccaccacaagcagcaacacccagatctgccacagccgtcggacccaaccactctcctccacagatcgtcaccacaaaaaacaaccccgttcagaaagcttcgacctgatttggagatctcagaacccgatctggcctcaacacattcaatcccaccagacggcctggtctccaatctaccctgctccgatccaagatggagtgacaccagcgctgccggaattccacgtaaccatcaattcccattttcaataaggtcacaacgcaaactggaccgcgaagccaacaccattccgcctgcactccaactaggccggctacaacgccaccaacatccaaacgcaaggtccactctggcccgtcggacgccgccgccgcaagggcatgctgttgaaccgggcatacacttttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

544

Amino Acids

61.06

Weight (kDa)

10.16

Isoelectric Point (pI)

51.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000187)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20170 FvH4_4g06831
rosa_chinensis RchiOBHm_Chr1g0321991 RchiOBHm_Chr2g0161811
rosa_laevigata RLG00000015375 RLG00000018377
rosa_multiflora Rmu_co8011754.1_g000001 Rmu_co8019986.1_g000001 Rmu_co8067766.1_g000001 Rmu_co8156128.1_g000001 Rmu_co8219154.1_g000003 Rmu_co8297235.1_g000001 Rmu_co8345223.1_g000001 Rmu_co8364775.1_g000001 Rmu_co8465075.1_g000001 Rmu_sc0000007.1_g000002 Rmu_sc0000054.1_g000015 Rmu_sc0000054.1_g000023 Rmu_sc0000145.1_g000010 Rmu_sc0000166.1_g000006 Rmu_sc0000218.1_g000012 Rmu_sc0000339.1_g000008 Rmu_sc0000342.1_g000015 Rmu_sc0000464.1_g000008 Rmu_sc0000620.1_g000003 Rmu_sc0000638.1_g000017 Rmu_sc0000890.1_g000007 Rmu_sc0000894.1_g000024 Rmu_sc0000909.1_g000010 Rmu_sc0000928.1_g000020 Rmu_sc0000977.1_g000007 Rmu_sc0001022.1_g000003 Rmu_sc0001035.1_g000037 Rmu_sc0001060.1_g000008 Rmu_sc0001168.1_g000005 Rmu_sc0001173.1_g000022 Rmu_sc0001179.1_g000016 Rmu_sc0001408.1_g000003 Rmu_sc0001455.1_g000005 Rmu_sc0001484.1_g000008 Rmu_sc0001585.1_g000010 Rmu_sc0001702.1_g000030 Rmu_sc0001755.1_g000063 Rmu_sc0001903.1_g000009 Rmu_sc0002099.1_g000001 Rmu_sc0002142.1_g000012 Rmu_sc0002158.1_g000014 Rmu_sc0002307.1_g000009 Rmu_sc0002358.1_g000013 Rmu_sc0002421.1_g000002 Rmu_sc0002426.1_g000003 Rmu_sc0002438.1_g000001 Rmu_sc0002461.1_g000001 Rmu_sc0002508.1_g000003 Rmu_sc0002532.1_g000056 Rmu_sc0002583.1_g000002 Rmu_sc0002927.1_g000033 Rmu_sc0003033.1_g000040 Rmu_sc0003271.1_g000006 Rmu_sc0003381.1_g000006 Rmu_sc0003507.1_g000007 Rmu_sc0003578.1_g000003 Rmu_sc0003693.1_g000004 Rmu_sc0003693.1_g000005 Rmu_sc0003704.1_g000003 Rmu_sc0003840.1_g000002 Rmu_sc0004084.1_g000026 Rmu_sc0004193.1_g000007 Rmu_sc0004234.1_g000033 Rmu_sc0004235.1_g000025 Rmu_sc0004435.1_g000006 Rmu_sc0004727.1_g000003 Rmu_sc0004741.1_g000001 Rmu_sc0004926.1_g000004 Rmu_sc0005365.1_g000001 Rmu_sc0005392.1_g000007 Rmu_sc0005415.1_g000001 Rmu_sc0005539.1_g000007 Rmu_sc0005708.1_g000017 Rmu_sc0006317.1_g000007 Rmu_sc0006453.1_g000054 Rmu_sc0006536.1_g000004 Rmu_sc0006740.1_g000022 Rmu_sc0006763.1_g000012 Rmu_sc0007115.1_g000002 Rmu_sc0007115.1_g000010 Rmu_sc0007129.1_g000017 Rmu_sc0007131.1_g000010 Rmu_sc0008373.1_g000008 Rmu_sc0009005.1_g000008 Rmu_sc0009252.1_g000007 Rmu_sc0009599.1_g000022 Rmu_sc0009785.1_g000027 Rmu_sc0009891.1_g000003 Rmu_sc0010099.1_g000010 Rmu_sc0010266.1_g000008 Rmu_sc0010334.1_g000003 Rmu_sc0010381.1_g000001 Rmu_sc0010496.1_g000003 Rmu_sc0010496.1_g000004 Rmu_sc0010546.1_g000003 Rmu_sc0011482.1_g000006 Rmu_sc0011875.1_g000010 Rmu_sc0011917.1_g000006 Rmu_sc0012293.1_g000004 Rmu_sc0012847.1_g000003 Rmu_sc0013773.1_g000001 Rmu_sc0016060.1_g000003 Rmu_sc0016170.1_g000013 Rmu_sc0016393.1_g000002 Rmu_sc0017589.1_g000001 Rmu_sc0017786.1_g000005 Rmu_sc0018326.1_g000002 Rmu_sc0020760.1_g000001 Rmu_sc0021262.1_g000003 Rmu_sc0023851.1_g000002 Rmu_sc0024044.1_g000001 Rmu_sc0026820.1_g000001 Rmu_sc0032306.1_g000001 Rmu_sc0035666.1_g000001 Rmu_sc0036881.1_g000001 Rmu_sc0037030.1_g000001 Rmu_sc0037158.1_g000001 Rmu_ssc0000016.1_g000002 Rmu_ssc0000044.1_g000012 Rmu_ssc0000044.1_g000014 Rmu_ssc0000050.1_g000064 Rmu_ssc0000064.1_g000022 Rmu_ssc0000154.1_g000037 Rmu_ssc0000178.1_g000013 Rmu_ssc0000217.1_g000022 Rmu_ssc0000392.1_g000004
rosa_roxburghii Rroxscaffold_3G00242000 Rroxscaffold_3G00242530 Rroxscaffold_6G00406010
rosa_rugosa Rorug01G0062000 Rorug02G0224000 Rorug02G0262900 Rorug02G0263000 Rorug02G0358900 Rorug02G0360500 Rorug02G0378500.1 Rorug02G0378600 Rorug02G0394700 Rorug03G0122900 Rorug03G0254600 Rorug03G0254700 Rorug03G0254800 Rorug04G0042200.1 Rorug04G0378100 Rorug05G0053400 Rorug05G0238600 Rorug05G0364500 Rorug05G0562000 Rorug06G0089300 Rorug06G0089400 Rorug06G0145700 Rorug07G0111600 Rorug07G0229500.1 Rorug07G0287600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1100, 1204
AasI GACNNNNNNGTC 1 cut(s) 1388
AatII GACGTC 1 cut(s) 778
Acc36I ACCTGC 4 cut(s) 998, 1012, 1100, 1204
Acc65I GGTACC 1 cut(s) 946
AccB1I GGYRCC 1 cut(s) 946
AccBSI CCGCTC 2 cut(s) 29, 303
AccI GTMKAC 1 cut(s) 535
AccII CGCG 1 cut(s) 1500
AccIII TCCGGA 1 cut(s) 688
AclWI GGATC 6 cut(s) 97, 165, 170, 181, 397, 1406
AcoI YGGCCR 2 cut(s) 151, 231
AcsI RAATTY 1 cut(s) 1443
AcyI GRCGYC 2 cut(s) 775, 1589
AdeI CACNNNGTG 1 cut(s) 651
AfaI GTAC 4 cut(s) 38, 706, 948, 1120
AfeI AGCGCT 1 cut(s) 1435
AfiI CCNNNNNNNGG 7 cut(s) 57, 267, 394, 545, 922, 1382, 1601
AflII CTTAAG 1 cut(s) 884
AgeI ACCGGT 1 cut(s) 949
AgsI TTSAA 5 cut(s) 349, 412, 1371, 1473, 1616
AjiI CACGTC 1 cut(s) 1162
AjnI CCWGG 1 cut(s) 1386
AloI GAACNNNNNNTCC 2 cut(s) 108, 140
Alw26I GTCTC 3 cut(s) 835, 994, 1396
AlwI GGATC 6 cut(s) 97, 165, 170, 181, 397, 1406
Ama87I CYCGRG 2 cut(s) 30, 544
Aor13HI TCCGGA 1 cut(s) 688
Aor51HI AGCGCT 1 cut(s) 1435
AoxI GGCC 8 cut(s) 151, 231, 366, 416, 1356, 1384, 1534, 1578
ApeKI GCWGC 6 cut(s) 19, 575, 796, 1153, 1234, 1436
ApoI RAATTY 1 cut(s) 1443
ArsI GACNNNNNNTTYG 4 cut(s) 613, 645, 1553, 1585
AsiGI ACCGGT 1 cut(s) 949
Asp718I GGTACC 1 cut(s) 946
AspLEI GCGC 2 cut(s) 1178, 1436
AspS9I GGNCC 7 cut(s) 244, 548, 686, 1264, 1495, 1569, 1579
AsuC2I CCSGG 2 cut(s) 155, 1620
AsuHPI GGTGA 7 cut(s) 94, 244, 325, 353, 964, 1046, 1284
AvaI CYCGRG 2 cut(s) 30, 544
AvaII GGWCC 6 cut(s) 244, 548, 686, 1264, 1495, 1569
BaeGI GKGCMC 1 cut(s) 612
BanI GGYRCC 1 cut(s) 946
BbsI GAAGAC 1 cut(s) 691
BbvI GCAGC 6 cut(s) 6, 587, 783, 1165, 1246, 1423
BccI CCATC 7 cut(s) 215, 446, 598, 802, 1173, 1413, 1464
BceAI ACGGC 2 cut(s) 1243, 1399
BcgI CGANNNNNNTGC 2 cut(s) 718, 752
BciT130I CCWGG 1 cut(s) 1388
BciVI GTATCC 2 cut(s) 268, 850
BcnI CCSGG 2 cut(s) 155, 1620
BcoDI GTCTC 3 cut(s) 835, 994, 1396
BfaI CTAG 6 cut(s) 209, 642, 669, 896, 1100, 1532
BfmI CTRYAG 1 cut(s) 1005
BfoI RGCGCY 1 cut(s) 1437
BfrI CTTAAG 1 cut(s) 884
BfuAI ACCTGC 4 cut(s) 998, 1012, 1100, 1204
BfuI GTATCC 2 cut(s) 268, 850
BglI GCCNNNNNGGC 1 cut(s) 1603
BglII AGATCT 2 cut(s) 1246, 1338
Bme1390I CCNGG 3 cut(s) 155, 1388, 1620
Bme18I GGWCC 6 cut(s) 244, 548, 686, 1264, 1495, 1569
BmeT110I CYCGRG 2 cut(s) 30, 544
BmgBI CACGTC 1 cut(s) 1162
BmgT120I GGNCC 7 cut(s) 244, 548, 686, 1264, 1495, 1569, 1579
BmiI GGNNCC 6 cut(s) 246, 549, 927, 948, 1126, 1266
BmrFI CCNGG 3 cut(s) 155, 1388, 1620
BmsI GCATC 3 cut(s) 491, 644, 945
BpiI GAAGAC 1 cut(s) 691
BpuMI CCSGG 2 cut(s) 155, 1620
BsaAI YACGTR 2 cut(s) 529, 1451
BsaBI GATNNNNATC 1 cut(s) 812
BsaHI GRCGYC 2 cut(s) 775, 1589
BsaI GGTCTC 2 cut(s) 994, 1396
BsaJI CCNNGG 3 cut(s) 179, 234, 337
BsaWI WCCGGW 2 cut(s) 688, 949
Bsc4I CCNNNNNNNGG 7 cut(s) 57, 267, 394, 545, 922, 1382, 1601
Bse118I RCCGGY 3 cut(s) 414, 949, 1536
Bse1I ACTGG 3 cut(s) 154, 272, 1497
Bse3DI GCAATG 1 cut(s) 76
Bse8I GATNNNNATC 1 cut(s) 812
BseAI TCCGGA 1 cut(s) 688
BseBI CCWGG 1 cut(s) 1388
BseDI CCNNGG 3 cut(s) 179, 234, 337
BseGI GGATG 3 cut(s) 457, 697, 1555
BseJI GATNNNNATC 1 cut(s) 812
BseLI CCNNNNNNNGG 7 cut(s) 57, 267, 394, 545, 922, 1382, 1601
BseMI GCAATG 1 cut(s) 76
BseMII CTCAG 2 cut(s) 792, 1356
BseNI ACTGG 3 cut(s) 154, 272, 1497
BseRI GAGGAG 5 cut(s) 575, 853, 866, 1079, 1268
BseSI GKGCMC 1 cut(s) 612
BseXI GCAGC 6 cut(s) 6, 587, 783, 1165, 1246, 1423
BsgI GTGCAG 3 cut(s) 675, 1172, 1506
Bsh1236I CGCG 1 cut(s) 1500
BshFI GGCC 8 cut(s) 153, 233, 368, 418, 1358, 1386, 1536, 1580
BshNI GGYRCC 1 cut(s) 946
BshTI ACCGGT 1 cut(s) 949
BsiHKCI CYCGRG 2 cut(s) 30, 544
BsiSI CCGG 8 cut(s) 154, 415, 689, 749, 950, 1440, 1537, 1619
BslFI GGGAC 4 cut(s) 129, 230, 561, 753
BslI CCNNNNNNNGG 7 cut(s) 57, 267, 394, 545, 922, 1382, 1601
BsmAI GTCTC 3 cut(s) 835, 994, 1396
BsmFI GGGAC 4 cut(s) 129, 230, 561, 753
BsnI GGCC 8 cut(s) 153, 233, 368, 418, 1358, 1386, 1536, 1580
Bso31I GGTCTC 2 cut(s) 994, 1396
BsoBI CYCGRG 2 cut(s) 30, 544
Bsp1286I GDGCHC 1 cut(s) 612
Bsp13I TCCGGA 1 cut(s) 688
Bsp19I CCATGG 2 cut(s) 179, 234
BspANI GGCC 8 cut(s) 153, 233, 368, 418, 1358, 1386, 1536, 1580
BspCNI CTCAG 2 cut(s) 793, 1355
BspEI TCCGGA 1 cut(s) 688
BspFNI CGCG 1 cut(s) 1500
BspHI TCATGA 1 cut(s) 864
BspLI GGNNCC 6 cut(s) 246, 549, 927, 948, 1126, 1266
BspMAI CTGCAG 1 cut(s) 1009
BspMI ACCTGC 4 cut(s) 998, 1012, 1100, 1204
BspPI GGATC 6 cut(s) 97, 165, 170, 181, 397, 1406
BspT107I GGYRCC 1 cut(s) 946
BspTI CTTAAG 1 cut(s) 884
BspTNI GGTCTC 2 cut(s) 994, 1396
BsrBI CCGCTC 2 cut(s) 29, 303
BsrDI GCAATG 1 cut(s) 76
BsrFI RCCGGY 3 cut(s) 414, 949, 1536
BsrI ACTGG 3 cut(s) 154, 272, 1497
BssAI RCCGGY 3 cut(s) 414, 949, 1536
BssECI CCNNGG 3 cut(s) 179, 234, 337
BssNI GRCGYC 2 cut(s) 775, 1589
BssT1I CCWWGG 3 cut(s) 179, 234, 337
Bst2UI CCWGG 1 cut(s) 1388
Bst4CI ACNGT 4 cut(s) 256, 586, 649, 709
BstACI GRCGYC 2 cut(s) 775, 1589
BstAFI CTTAAG 1 cut(s) 884
BstBAI YACGTR 2 cut(s) 529, 1451
BstC8I GCNNGC 4 cut(s) 580, 1521, 1538, 1608
BstDEI CTNAG 3 cut(s) 95, 801, 1342
BstDSI CCRYGG 2 cut(s) 179, 234
BstF5I GGATG 3 cut(s) 457, 697, 1555
BstFNI CGCG 1 cut(s) 1500
BstH2I RGCGCY 1 cut(s) 1437
BstHHI GCGC 2 cut(s) 1178, 1436
BstMAI GTCTC 3 cut(s) 835, 994, 1396
BstMWI GCNNNNNNNGC 4 cut(s) 203, 1153, 1597, 1603
BstNI CCWGG 1 cut(s) 1388
BstNSI RCATGY 1 cut(s) 1610
BstSCI CCNGG 3 cut(s) 153, 1386, 1618
BstSFI CTRYAG 1 cut(s) 1005
BstSLI GKGCMC 1 cut(s) 612
BstUI CGCG 1 cut(s) 1500
BstV1I GCAGC 6 cut(s) 6, 587, 783, 1165, 1246, 1423
BstV2I GAAGAC 1 cut(s) 691
BstX2I RGATCY 5 cut(s) 162, 173, 402, 1246, 1338
BstYI RGATCY 5 cut(s) 162, 173, 402, 1246, 1338
BsuI GTATCC 2 cut(s) 268, 850
BsuRI GGCC 8 cut(s) 153, 233, 368, 418, 1358, 1386, 1536, 1580
BtgI CCRYGG 2 cut(s) 179, 234
BtrI CACGTC 1 cut(s) 1162
BtsCI GGATG 3 cut(s) 457, 697, 1555
BtsI GCAGTG 2 cut(s) 275, 759
BtsIMutI CAGTG 3 cut(s) 275, 654, 759
BveI ACCTGC 4 cut(s) 998, 1012, 1100, 1204
Cac8I GCNNGC 4 cut(s) 580, 1521, 1538, 1608
CciI TCATGA 1 cut(s) 864
CfoI GCGC 2 cut(s) 1178, 1436
Cfr10I RCCGGY 3 cut(s) 414, 949, 1536
Cfr13I GGNCC 7 cut(s) 244, 548, 686, 1264, 1495, 1569, 1579
CseI GACGC 3 cut(s) 152, 585, 1597
Csp6I GTAC 4 cut(s) 37, 705, 947, 1119
CspAI ACCGGT 1 cut(s) 949
CspCI CAANNNNNGTGG 2 cut(s) 1093, 1128
CviAII CATG 6 cut(s) 75, 180, 235, 679, 865, 1607
CviQI GTAC 4 cut(s) 37, 705, 947, 1119
DdeI CTNAG 3 cut(s) 95, 801, 1342
DraIII CACNNNGTG 1 cut(s) 651
DrdI GACNNNNNNGTC 1 cut(s) 1388
DseDI GACNNNNNNGTC 1 cut(s) 1388
EaeI YGGCCR 2 cut(s) 151, 231
EciI GGCGGA 1 cut(s) 1506
Eco130I CCWWGG 3 cut(s) 179, 234, 337
Eco31I GGTCTC 2 cut(s) 994, 1396
Eco47I GGWCC 6 cut(s) 244, 548, 686, 1264, 1495, 1569
Eco47III AGCGCT 1 cut(s) 1435
Eco88I CYCGRG 2 cut(s) 30, 544
EcoO109I RGGNCCY 1 cut(s) 548
EcoRI GAATTC 1 cut(s) 1443
EcoRII CCWGG 1 cut(s) 1386
EcoT14I CCWWGG 3 cut(s) 179, 234, 337
EcoT22I ATGCAT 1 cut(s) 76
ErhI CCWWGG 3 cut(s) 179, 234, 337
FaeI CATG 6 cut(s) 78, 183, 238, 682, 868, 1610
FaqI GGGAC 4 cut(s) 129, 230, 561, 753
FatI CATG 6 cut(s) 74, 179, 234, 678, 864, 1606
FauI CCCGC 1 cut(s) 72
FblI GTMKAC 1 cut(s) 535
FokI GGATG 3 cut(s) 464, 704, 1542
FspBI CTAG 6 cut(s) 209, 642, 669, 896, 1100, 1532
GlaI GCGC 2 cut(s) 1177, 1435
HaeII RGCGCY 1 cut(s) 1437
HaeIII GGCC 8 cut(s) 153, 233, 368, 418, 1358, 1386, 1536, 1580
HapII CCGG 8 cut(s) 154, 415, 689, 749, 950, 1440, 1537, 1619
HgaI GACGC 3 cut(s) 152, 585, 1597
HhaI GCGC 2 cut(s) 1178, 1436
Hin1I GRCGYC 2 cut(s) 775, 1589
Hin1II CATG 6 cut(s) 78, 183, 238, 682, 868, 1610
Hin6I GCGC 2 cut(s) 1176, 1434
HinP1I GCGC 2 cut(s) 1176, 1434
HindIII AAGCTT 2 cut(s) 881, 1319
HinfI GANTC 5 cut(s) 43, 239, 285, 390, 919
HpaII CCGG 8 cut(s) 154, 415, 689, 749, 950, 1440, 1537, 1619
HphI GGTGA 7 cut(s) 94, 244, 325, 353, 964, 1046, 1284
Hpy166II GTNNAC 4 cut(s) 333, 536, 676, 1572
Hpy188III TCNNGA 6 cut(s) 32, 166, 546, 689, 865, 923
Hpy8I GTNNAC 4 cut(s) 333, 536, 676, 1572
Hpy99I CGWCG 3 cut(s) 777, 1264, 1587
HpyAV CCTTC 4 cut(s) 163, 367, 436, 1135
HpyCH4III ACNGT 4 cut(s) 256, 586, 649, 709
HpyCH4IV ACGT 5 cut(s) 528, 766, 775, 1161, 1450
HpyCH4V TGCA 8 cut(s) 74, 280, 471, 656, 958, 1007, 1153, 1523
HpyF10VI GCNNNNNNNGC 4 cut(s) 203, 1153, 1597, 1603
HpyF3I CTNAG 3 cut(s) 95, 801, 1342
HpySE526I ACGT 5 cut(s) 528, 766, 775, 1161, 1450
Hsp92I GRCGYC 2 cut(s) 775, 1589
Hsp92II CATG 6 cut(s) 78, 183, 238, 682, 868, 1610
HspAI GCGC 2 cut(s) 1176, 1434
Kpn2I TCCGGA 1 cut(s) 688
KpnI GGTACC 1 cut(s) 950
KroI GCCGGC 1 cut(s) 1536
KroNI GCCGGC 1 cut(s) 1538
LmnI GCTCC 7 cut(s) 53, 202, 390, 1092, 1130, 1144, 1412
Lsp1109I GCAGC 6 cut(s) 6, 587, 783, 1165, 1246, 1423
LweI GCATC 3 cut(s) 491, 644, 945
MaeI CTAG 6 cut(s) 209, 642, 669, 896, 1100, 1532
MaeII ACGT 5 cut(s) 528, 766, 775, 1161, 1450
MaeIII GTNAC 6 cut(s) 520, 597, 1290, 1424, 1451, 1479
MbiI CCGCTC 2 cut(s) 29, 303
MboII GAAGA 2 cut(s) 691, 1054
MflI RGATCY 5 cut(s) 162, 173, 402, 1246, 1338
MhlI GDGCHC 1 cut(s) 612
MluCI AATT 2 cut(s) 1443, 1460
MlyI GAGTC 2 cut(s) 37, 233
MmeI TCCRAC 9 cut(s) 120, 358, 454, 883, 995, 1152, 1242, 1552, 1565
Mph1103I ATGCAT 1 cut(s) 76
MroI TCCGGA 1 cut(s) 688
MroNI GCCGGC 1 cut(s) 1536
MseI TTAA 1 cut(s) 885
MspCI CTTAAG 1 cut(s) 884
MspI CCGG 8 cut(s) 154, 415, 689, 749, 950, 1440, 1537, 1619
MspR9I CCNGG 3 cut(s) 155, 1388, 1620
MvaI CCWGG 1 cut(s) 1388
MvnI CGCG 1 cut(s) 1500
MwoI GCNNNNNNNGC 4 cut(s) 203, 1153, 1597, 1603
NaeI GCCGGC 1 cut(s) 1538
NciI CCSGG 2 cut(s) 155, 1620
NcoI CCATGG 2 cut(s) 179, 234
NgoMIV GCCGGC 1 cut(s) 1536
NlaIII CATG 6 cut(s) 78, 183, 238, 682, 868, 1610
NlaIV GGNNCC 6 cut(s) 246, 549, 927, 948, 1126, 1266
NmuCI GTSAC 4 cut(s) 597, 1290, 1424, 1479
NsiI ATGCAT 1 cut(s) 76
NspI RCATGY 1 cut(s) 1610
PaeI GCATGC 1 cut(s) 1610
PagI TCATGA 1 cut(s) 864
PaqCI CACCTGC 2 cut(s) 1100, 1204
PcsI WCGNNNNNNNCGW 1 cut(s) 772
PdiI GCCGGC 1 cut(s) 1538
PfeI GAWTC 3 cut(s) 285, 390, 919
PflFI GACNNNGTC 1 cut(s) 242
PinAI ACCGGT 1 cut(s) 949
PleI GAGTC 2 cut(s) 37, 233
PpsI GAGTC 2 cut(s) 37, 233
Ppu21I YACGTR 2 cut(s) 529, 1451
PpuMI RGGWCCY 1 cut(s) 548
Psp5II RGGWCCY 1 cut(s) 548
Psp6I CCWGG 1 cut(s) 1386
PspGI CCWGG 1 cut(s) 1386
PspN4I GGNNCC 6 cut(s) 246, 549, 927, 948, 1126, 1266
PspPI GGNCC 7 cut(s) 244, 548, 686, 1264, 1495, 1569, 1579
PspPPI RGGWCCY 1 cut(s) 548
PsrI GAACNNNNNNTAC 1 cut(s) 1608
PstI CTGCAG 1 cut(s) 1009
PsuI RGATCY 5 cut(s) 162, 173, 402, 1246, 1338
PsyI GACNNNGTC 1 cut(s) 242
RsaI GTAC 4 cut(s) 38, 706, 948, 1120
RsaNI GTAC 4 cut(s) 37, 705, 947, 1119
SaqAI TTAA 1 cut(s) 885
Sau96I GGNCC 7 cut(s) 244, 548, 686, 1264, 1495, 1569, 1579
SbfI CCTGCAGG 1 cut(s) 1009
SchI GAGTC 2 cut(s) 37, 233
ScrFI CCNGG 3 cut(s) 155, 1388, 1620
SdaI CCTGCAGG 1 cut(s) 1009
SduI GDGCHC 1 cut(s) 612
SfaNI GCATC 3 cut(s) 491, 644, 945
SfcI CTRYAG 1 cut(s) 1005
SinI GGWCC 6 cut(s) 244, 548, 686, 1264, 1495, 1569
SmlI CTYRAG 1 cut(s) 884
SmoI CTYRAG 1 cut(s) 884
SphI GCATGC 1 cut(s) 1610
Sse8387I CCTGCAGG 1 cut(s) 1009
Sse9I AATT 2 cut(s) 1443, 1460
SspMI CTAG 6 cut(s) 209, 642, 669, 896, 1100, 1532
StyD4I CCNGG 3 cut(s) 153, 1386, 1618
StyI CCWWGG 3 cut(s) 179, 234, 337
TaaI ACNGT 4 cut(s) 256, 586, 649, 709
TaiI ACGT 5 cut(s) 531, 769, 778, 1164, 1453
TaqI TCGA 5 cut(s) 459, 499, 506, 620, 1324
TaqII GACCGA 1 cut(s) 232
TasI AATT 2 cut(s) 1443, 1460
TatI WGTACW 1 cut(s) 36
TauI GCSGC 5 cut(s) 233, 1202, 1594, 1597, 1600
TfiI GAWTC 3 cut(s) 285, 390, 919
Tru1I TTAA 1 cut(s) 885
Tru9I TTAA 1 cut(s) 885
TscAI CASTG 3 cut(s) 282, 654, 759
TseFI GTSAC 4 cut(s) 597, 1290, 1424, 1479
TseI GCWGC 6 cut(s) 19, 575, 796, 1153, 1234, 1436
Tsp45I GTSAC 4 cut(s) 597, 1290, 1424, 1479
TspGWI ACGGA 1 cut(s) 692
TspRI CASTG 3 cut(s) 282, 654, 759
Tth111I GACNNNGTC 1 cut(s) 242
Vha464I CTTAAG 1 cut(s) 884
VpaK11BI GGWCC 6 cut(s) 244, 548, 686, 1264, 1495, 1569
XapI RAATTY 1 cut(s) 1443
XceI RCATGY 1 cut(s) 1610
XmiI GTMKAC 1 cut(s) 535
XspI CTAG 6 cut(s) 209, 642, 669, 896, 1100, 1532
ZraI GACGTC 1 cut(s) 776
Zsp2I ATGCAT 1 cut(s) 76
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.