Pentatricopeptide repeat-containing protein At5g61990
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 93 |
| Acc65I | GGTACC | 1 cut(s) | 777 |
| AccB1I | GGYRCC | 3 cut(s) | 296, 777, 1052 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 933 |
| AciI | CCGC | 1 cut(s) | 920 |
| AclWI | GGATC | 2 cut(s) | 908, 1157 |
| AcoI | YGGCCR | 1 cut(s) | 880 |
| AcsI | RAATTY | 4 cut(s) | 319, 667, 858, 950 |
| AcuI | CTGAAG | 2 cut(s) | 173, 990 |
| AcyI | GRCGYC | 1 cut(s) | 1053 |
| AfaI | GTAC | 5 cut(s) | 145, 676, 779, 793, 801 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 220, 418, 933, 1172 |
| AgsI | TTSAA | 9 cut(s) | 239, 496, 508, 682, 739, 855, 977, 1011, 1199 |
| AjnI | CCWGG | 2 cut(s) | 249, 1171 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 310, 342 |
| AluBI | AGCT | 9 cut(s) | 11, 186, 208, 367, 838, 1026, 1047, 1193, 1202 |
| AluI | AGCT | 9 cut(s) | 11, 186, 208, 367, 838, 1026, 1047, 1193, 1202 |
| Alw21I | GWGCWC | 2 cut(s) | 188, 315 |
| AlwI | GGATC | 2 cut(s) | 908, 1157 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 911, 1047 |
| AoxI | GGCC | 1 cut(s) | 880 |
| ApeKI | GCWGC | 1 cut(s) | 1209 |
| ApoI | RAATTY | 4 cut(s) | 319, 667, 858, 950 |
| Asp718I | GGTACC | 1 cut(s) | 777 |
| AspLEI | GCGC | 1 cut(s) | 1055 |
| AspS9I | GGNCC | 2 cut(s) | 73, 408 |
| AsuC2I | CCSGG | 1 cut(s) | 412 |
| AsuHPI | GGTGA | 4 cut(s) | 269, 700, 857, 1172 |
| AsuNHI | GCTAGC | 1 cut(s) | 1022 |
| AvaII | GGWCC | 2 cut(s) | 73, 408 |
| AxyI | CCTNAGG | 1 cut(s) | 1156 |
| BaeGI | GKGCMC | 1 cut(s) | 301 |
| BalI | TGGCCA | 1 cut(s) | 882 |
| BanI | GGYRCC | 3 cut(s) | 296, 777, 1052 |
| BanII | GRGCYC | 1 cut(s) | 188 |
| Bbv12I | GWGCWC | 2 cut(s) | 188, 315 |
| BccI | CCATC | 7 cut(s) | 539, 637, 689, 742, 800, 990, 1148 |
| BciT130I | CCWGG | 2 cut(s) | 251, 1173 |
| BclI | TGATCA | 1 cut(s) | 585 |
| BcnI | CCSGG | 1 cut(s) | 412 |
| BfaI | CTAG | 2 cut(s) | 821, 1023 |
| BfmI | CTRYAG | 1 cut(s) | 85 |
| BfoI | RGCGCY | 1 cut(s) | 1056 |
| BisI | GCNGC | 1 cut(s) | 1210 |
| BlsI | GCNGC | 1 cut(s) | 1211 |
| Bme1390I | CCNGG | 3 cut(s) | 251, 412, 1173 |
| Bme18I | GGWCC | 2 cut(s) | 73, 408 |
| BmgT120I | GGNCC | 2 cut(s) | 73, 408 |
| BmiI | GGNNCC | 5 cut(s) | 74, 298, 410, 779, 1054 |
| BmrFI | CCNGG | 3 cut(s) | 251, 412, 1173 |
| BmtI | GCTAGC | 1 cut(s) | 1026 |
| BpuMI | CCSGG | 1 cut(s) | 412 |
| Bsa29I | ATCGAT | 1 cut(s) | 746 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1139 |
| BsaHI | GRCGYC | 1 cut(s) | 1053 |
| BsaJI | CCNNGG | 2 cut(s) | 382, 1114 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 164, 194, 901, 931 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 220, 418, 933, 1172 |
| Bse118I | RCCGGY | 1 cut(s) | 418 |
| Bse1I | ACTGG | 2 cut(s) | 883, 927 |
| Bse21I | CCTNAGG | 1 cut(s) | 1156 |
| Bse3DI | GCAATG | 2 cut(s) | 586, 1084 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1139 |
| BseBI | CCWGG | 2 cut(s) | 251, 1173 |
| BseCI | ATCGAT | 1 cut(s) | 746 |
| BseDI | CCNNGG | 2 cut(s) | 382, 1114 |
| BseGI | GGATG | 6 cut(s) | 124, 525, 555, 616, 1001, 1133 |
| BseJI | GATNNNNATC | 1 cut(s) | 1139 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 220, 418, 933, 1172 |
| BseMI | GCAATG | 2 cut(s) | 586, 1084 |
| BseNI | ACTGG | 2 cut(s) | 883, 927 |
| BseSI | GKGCMC | 1 cut(s) | 301 |
| BshFI | GGCC | 1 cut(s) | 882 |
| BshNI | GGYRCC | 3 cut(s) | 296, 777, 1052 |
| BshVI | ATCGAT | 1 cut(s) | 746 |
| BsiHKAI | GWGCWC | 2 cut(s) | 188, 315 |
| BsiSI | CCGG | 2 cut(s) | 412, 419 |
| BslFI | GGGAC | 1 cut(s) | 943 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 220, 418, 933, 1172 |
| BsmFI | GGGAC | 1 cut(s) | 943 |
| BsmI | GAATGC | 2 cut(s) | 325, 482 |
| BsnI | GGCC | 1 cut(s) | 882 |
| Bsp1286I | GDGCHC | 3 cut(s) | 188, 301, 315 |
| Bsp143I | GATC | 3 cut(s) | 585, 913, 1162 |
| Bsp19I | CCATGG | 1 cut(s) | 382 |
| BspACI | CCGC | 1 cut(s) | 920 |
| BspANI | GGCC | 1 cut(s) | 882 |
| BspDI | ATCGAT | 1 cut(s) | 746 |
| BspLI | GGNNCC | 5 cut(s) | 74, 298, 410, 779, 1054 |
| BspMAI | CTGCAG | 1 cut(s) | 89 |
| BspOI | GCTAGC | 1 cut(s) | 1026 |
| BspPI | GGATC | 2 cut(s) | 908, 1157 |
| BspQI | GCTCTTC | 1 cut(s) | 828 |
| BspT107I | GGYRCC | 3 cut(s) | 296, 777, 1052 |
| BsrDI | GCAATG | 2 cut(s) | 586, 1084 |
| BsrFI | RCCGGY | 1 cut(s) | 418 |
| BsrI | ACTGG | 2 cut(s) | 883, 927 |
| BssAI | RCCGGY | 1 cut(s) | 418 |
| BssECI | CCNNGG | 2 cut(s) | 382, 1114 |
| BssMI | GATC | 3 cut(s) | 585, 913, 1162 |
| BssNI | GRCGYC | 1 cut(s) | 1053 |
| BssT1I | CCWWGG | 2 cut(s) | 382, 1114 |
| Bst2UI | CCWGG | 2 cut(s) | 251, 1173 |
| Bst4CI | ACNGT | 2 cut(s) | 130, 636 |
| Bst6I | CTCTTC | 1 cut(s) | 828 |
| BstACI | GRCGYC | 1 cut(s) | 1053 |
| BstC8I | GCNNGC | 6 cut(s) | 378, 420, 924, 1024, 1107, 1111 |
| BstDEI | CTNAG | 2 cut(s) | 561, 1156 |
| BstDSI | CCRYGG | 1 cut(s) | 382 |
| BstEII | GGTNACC | 2 cut(s) | 257, 845 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1170 |
| BstF5I | GGATG | 6 cut(s) | 124, 525, 555, 616, 1001, 1133 |
| BstH2I | RGCGCY | 1 cut(s) | 1056 |
| BstHHI | GCGC | 1 cut(s) | 1055 |
| BstKTI | GATC | 3 cut(s) | 588, 916, 1165 |
| BstMBI | GATC | 3 cut(s) | 585, 913, 1162 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 373, 1199 |
| BstNI | CCWGG | 2 cut(s) | 251, 1173 |
| BstNSI | RCATGY | 1 cut(s) | 380 |
| BstPI | GGTNACC | 2 cut(s) | 257, 845 |
| BstSCI | CCNGG | 3 cut(s) | 249, 410, 1171 |
| BstSFI | CTRYAG | 1 cut(s) | 85 |
| BstSLI | GKGCMC | 1 cut(s) | 301 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 254 |
| Bsu15I | ATCGAT | 1 cut(s) | 746 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1156 |
| BsuRI | GGCC | 1 cut(s) | 882 |
| BsuTUI | ATCGAT | 1 cut(s) | 746 |
| BtgI | CCRYGG | 1 cut(s) | 382 |
| BtsCI | GGATG | 6 cut(s) | 124, 525, 555, 616, 1001, 1133 |
| BtsIMutI | CAGTG | 2 cut(s) | 135, 909 |
| Cac8I | GCNNGC | 6 cut(s) | 378, 420, 924, 1024, 1107, 1111 |
| CaiI | CAGNNNCTG | 2 cut(s) | 911, 1047 |
| CfoI | GCGC | 1 cut(s) | 1055 |
| Cfr10I | RCCGGY | 1 cut(s) | 418 |
| Cfr13I | GGNCC | 2 cut(s) | 73, 408 |
| ClaI | ATCGAT | 1 cut(s) | 746 |
| CsiI | ACCWGGT | 1 cut(s) | 249 |
| Csp6I | GTAC | 5 cut(s) | 144, 675, 778, 792, 800 |
| CviAII | CATG | 6 cut(s) | 17, 377, 383, 830, 955, 992 |
| CviQI | GTAC | 5 cut(s) | 144, 675, 778, 792, 800 |
| DdeI | CTNAG | 2 cut(s) | 561, 1156 |
| DinI | GGCGCC | 1 cut(s) | 1054 |
| DpnI | GATC | 3 cut(s) | 587, 915, 1164 |
| DpnII | GATC | 3 cut(s) | 585, 913, 1162 |
| EaeI | YGGCCR | 1 cut(s) | 880 |
| Eam1104I | CTCTTC | 1 cut(s) | 828 |
| EarI | CTCTTC | 1 cut(s) | 828 |
| EciI | GGCGGA | 1 cut(s) | 909 |
| Ecl136II | GAGCTC | 1 cut(s) | 186 |
| Eco130I | CCWWGG | 2 cut(s) | 382, 1114 |
| Eco24I | GRGCYC | 1 cut(s) | 188 |
| Eco47I | GGWCC | 2 cut(s) | 73, 408 |
| Eco53kI | GAGCTC | 1 cut(s) | 186 |
| Eco57I | CTGAAG | 2 cut(s) | 173, 990 |
| Eco81I | CCTNAGG | 1 cut(s) | 1156 |
| Eco91I | GGTNACC | 2 cut(s) | 257, 845 |
| EcoICRI | GAGCTC | 1 cut(s) | 186 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1170 |
| EcoO109I | RGGNCCY | 1 cut(s) | 408 |
| EcoO65I | GGTNACC | 2 cut(s) | 257, 845 |
| EcoRI | GAATTC | 1 cut(s) | 950 |
| EcoRII | CCWGG | 2 cut(s) | 249, 1171 |
| EcoT14I | CCWWGG | 2 cut(s) | 382, 1114 |
| EcoT38I | GRGCYC | 1 cut(s) | 188 |
| EgeI | GGCGCC | 1 cut(s) | 1054 |
| EheI | GGCGCC | 1 cut(s) | 1054 |
| ErhI | CCWWGG | 2 cut(s) | 382, 1114 |
| FaeI | CATG | 6 cut(s) | 20, 380, 386, 833, 958, 995 |
| FaqI | GGGAC | 1 cut(s) | 943 |
| FatI | CATG | 6 cut(s) | 16, 376, 382, 829, 954, 991 |
| FbaI | TGATCA | 1 cut(s) | 585 |
| Fnu4HI | GCNGC | 1 cut(s) | 1210 |
| FokI | GGATG | 6 cut(s) | 131, 532, 562, 623, 1008, 1140 |
| FriOI | GRGCYC | 1 cut(s) | 188 |
| Fsp4HI | GCNGC | 1 cut(s) | 1210 |
| FspBI | CTAG | 2 cut(s) | 821, 1023 |
| GlaI | GCGC | 1 cut(s) | 1054 |
| GluI | GCNGC | 1 cut(s) | 1210 |
| HaeII | RGCGCY | 1 cut(s) | 1056 |
| HaeIII | GGCC | 1 cut(s) | 882 |
| HapII | CCGG | 2 cut(s) | 412, 419 |
| HhaI | GCGC | 1 cut(s) | 1055 |
| Hin1I | GRCGYC | 1 cut(s) | 1053 |
| Hin1II | CATG | 6 cut(s) | 20, 380, 386, 833, 958, 995 |
| Hin6I | GCGC | 1 cut(s) | 1053 |
| HinP1I | GCGC | 1 cut(s) | 1053 |
| HindIII | AAGCTT | 1 cut(s) | 365 |
| HinfI | GANTC | 2 cut(s) | 67, 173 |
| HpaII | CCGG | 2 cut(s) | 412, 419 |
| HphI | GGTGA | 4 cut(s) | 269, 700, 857, 1172 |
| Hpy166II | GTNNAC | 2 cut(s) | 76, 989 |
| Hpy188I | TCNGA | 7 cut(s) | 39, 100, 153, 666, 907, 949, 1043 |
| Hpy188III | TCNNGA | 2 cut(s) | 532, 968 |
| Hpy8I | GTNNAC | 2 cut(s) | 76, 989 |
| HpyAV | CCTTC | 6 cut(s) | 646, 688, 751, 827, 861, 1118 |
| HpyCH4III | ACNGT | 2 cut(s) | 130, 636 |
| HpyCH4V | TGCA | 6 cut(s) | 32, 87, 325, 593, 1077, 1209 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 373, 1199 |
| HpyF3I | CTNAG | 2 cut(s) | 561, 1156 |
| Hsp92I | GRCGYC | 1 cut(s) | 1053 |
| Hsp92II | CATG | 6 cut(s) | 20, 380, 386, 833, 958, 995 |
| HspAI | GCGC | 1 cut(s) | 1053 |
| KasI | GGCGCC | 1 cut(s) | 1052 |
| KpnI | GGTACC | 1 cut(s) | 781 |
| KroI | GCCGGC | 1 cut(s) | 418 |
| KroNI | GCCGGC | 1 cut(s) | 420 |
| Ksp22I | TGATCA | 1 cut(s) | 585 |
| Kzo9I | GATC | 3 cut(s) | 585, 913, 1162 |
| LguI | GCTCTTC | 1 cut(s) | 828 |
| LmnI | GCTCC | 1 cut(s) | 318 |
| MabI | ACCWGGT | 1 cut(s) | 249 |
| MaeI | CTAG | 2 cut(s) | 821, 1023 |
| MaeIII | GTNAC | 2 cut(s) | 257, 845 |
| MalI | GATC | 3 cut(s) | 587, 915, 1164 |
| MboI | GATC | 3 cut(s) | 585, 913, 1162 |
| MboII | GAAGA | 2 cut(s) | 227, 845 |
| MfeI | CAATTG | 2 cut(s) | 302, 1213 |
| MhlI | GDGCHC | 3 cut(s) | 188, 301, 315 |
| MlsI | TGGCCA | 1 cut(s) | 882 |
| MluCI | AATT | 9 cut(s) | 302, 319, 358, 484, 667, 858, 950, 1011, 1213 |
| MluNI | TGGCCA | 1 cut(s) | 882 |
| Mly113I | GGCGCC | 1 cut(s) | 1053 |
| MlyI | GAGTC | 1 cut(s) | 182 |
| MmeI | TCCRAC | 1 cut(s) | 372 |
| MnlI | CCTC | 8 cut(s) | 109, 126, 516, 550, 621, 798, 861, 927 |
| Mox20I | TGGCCA | 1 cut(s) | 882 |
| MroNI | GCCGGC | 1 cut(s) | 418 |
| MscI | TGGCCA | 1 cut(s) | 882 |
| MseI | TTAA | 4 cut(s) | 275, 1014, 1091, 1181 |
| MslI | CAYNNNNRTG | 1 cut(s) | 381 |
| Msp20I | TGGCCA | 1 cut(s) | 882 |
| MspI | CCGG | 2 cut(s) | 412, 419 |
| MspR9I | CCNGG | 3 cut(s) | 251, 412, 1173 |
| MunI | CAATTG | 2 cut(s) | 302, 1213 |
| Mva1269I | GAATGC | 2 cut(s) | 325, 482 |
| MvaI | CCWGG | 2 cut(s) | 251, 1173 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 373, 1199 |
| NaeI | GCCGGC | 1 cut(s) | 420 |
| NarI | GGCGCC | 1 cut(s) | 1053 |
| NciI | CCSGG | 1 cut(s) | 412 |
| NcoI | CCATGG | 1 cut(s) | 382 |
| NdeII | GATC | 3 cut(s) | 585, 913, 1162 |
| NgoMIV | GCCGGC | 1 cut(s) | 418 |
| NheI | GCTAGC | 1 cut(s) | 1022 |
| NlaIII | CATG | 6 cut(s) | 20, 380, 386, 833, 958, 995 |
| NlaIV | GGNNCC | 5 cut(s) | 74, 298, 410, 779, 1054 |
| NmeAIII | GCCGAG | 1 cut(s) | 492 |
| NmuCI | GTSAC | 2 cut(s) | 257, 845 |
| NspI | RCATGY | 1 cut(s) | 380 |
| PaeI | GCATGC | 1 cut(s) | 380 |
| PciSI | GCTCTTC | 1 cut(s) | 828 |
| PctI | GAATGC | 2 cut(s) | 325, 482 |
| PdiI | GCCGGC | 1 cut(s) | 420 |
| PfeI | GAWTC | 1 cut(s) | 67 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 933 |
| PkrI | GCNGC | 1 cut(s) | 1211 |
| PleI | GAGTC | 1 cut(s) | 181 |
| PluTI | GGCGCC | 1 cut(s) | 1056 |
| PpsI | GAGTC | 1 cut(s) | 181 |
| PpuMI | RGGWCCY | 1 cut(s) | 408 |
| PsiI | TTATAA | 1 cut(s) | 93 |
| Psp124BI | GAGCTC | 1 cut(s) | 188 |
| Psp5II | RGGWCCY | 1 cut(s) | 408 |
| Psp6I | CCWGG | 2 cut(s) | 249, 1171 |
| PspEI | GGTNACC | 2 cut(s) | 257, 845 |
| PspGI | CCWGG | 2 cut(s) | 249, 1171 |
| PspN4I | GGNNCC | 5 cut(s) | 74, 298, 410, 779, 1054 |
| PspPI | GGNCC | 2 cut(s) | 73, 408 |
| PspPPI | RGGWCCY | 1 cut(s) | 408 |
| PstI | CTGCAG | 1 cut(s) | 89 |
| PstNI | CAGNNNCTG | 2 cut(s) | 911, 1047 |
| RsaI | GTAC | 5 cut(s) | 145, 676, 779, 793, 801 |
| RsaNI | GTAC | 5 cut(s) | 144, 675, 778, 792, 800 |
| RseI | CAYNNNNRTG | 1 cut(s) | 381 |
| SacI | GAGCTC | 1 cut(s) | 188 |
| SapI | GCTCTTC | 1 cut(s) | 828 |
| SaqAI | TTAA | 4 cut(s) | 275, 1014, 1091, 1181 |
| SatI | GCNGC | 1 cut(s) | 1210 |
| Sau3AI | GATC | 3 cut(s) | 585, 913, 1162 |
| Sau96I | GGNCC | 2 cut(s) | 73, 408 |
| SchI | GAGTC | 1 cut(s) | 182 |
| ScrFI | CCNGG | 3 cut(s) | 251, 412, 1173 |
| SduI | GDGCHC | 3 cut(s) | 188, 301, 315 |
| SexAI | ACCWGGT | 1 cut(s) | 249 |
| SfcI | CTRYAG | 1 cut(s) | 85 |
| SfoI | GGCGCC | 1 cut(s) | 1054 |
| SinI | GGWCC | 2 cut(s) | 73, 408 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 381 |
| SphI | GCATGC | 1 cut(s) | 380 |
| Sse9I | AATT | 9 cut(s) | 302, 319, 358, 484, 667, 858, 950, 1011, 1213 |
| SsiI | CCGC | 1 cut(s) | 920 |
| SspDI | GGCGCC | 1 cut(s) | 1052 |
| SspMI | CTAG | 2 cut(s) | 821, 1023 |
| SstI | GAGCTC | 1 cut(s) | 188 |
| StyD4I | CCNGG | 3 cut(s) | 249, 410, 1171 |
| StyI | CCWWGG | 2 cut(s) | 382, 1114 |
| TaaI | ACNGT | 2 cut(s) | 130, 636 |
| TaqI | TCGA | 3 cut(s) | 335, 746, 1133 |
| TasI | AATT | 9 cut(s) | 302, 319, 358, 484, 667, 858, 950, 1011, 1213 |
| TfiI | GAWTC | 1 cut(s) | 67 |
| Tru1I | TTAA | 4 cut(s) | 275, 1014, 1091, 1181 |
| Tru9I | TTAA | 4 cut(s) | 275, 1014, 1091, 1181 |
| TscAI | CASTG | 2 cut(s) | 135, 916 |
| TseFI | GTSAC | 2 cut(s) | 257, 845 |
| TseI | GCWGC | 1 cut(s) | 1209 |
| Tsp45I | GTSAC | 2 cut(s) | 257, 845 |
| TspDTI | ATGAA | 4 cut(s) | 138, 738, 846, 943 |
| TspGWI | ACGGA | 2 cut(s) | 166, 220 |
| TspRI | CASTG | 2 cut(s) | 135, 916 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 933 |
| VpaK11BI | GGWCC | 2 cut(s) | 73, 408 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1170 |
| XapI | RAATTY | 4 cut(s) | 319, 667, 858, 950 |
| XceI | RCATGY | 1 cut(s) | 380 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 836, 1063 |
| XspI | CTAG | 2 cut(s) | 821, 1023 |