Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0001959

Physical Location & Seq

Genomic Coordinates Forward (+)

4853442 .. 4857514

Gene Structure 4073 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g09120.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2472 bp

ATGGCTCTCCCCAAGAGTTTTACATTCTCTCTTTGTTTCATTCTTTCTGTGATCCTCTCCAGCTTTGTTGCTAATGCCACAGACGTTTCGTATGATGGCAGAGCCATCATCATTGATGGCAAACGAAGGATTTTGAACTCTGGTTCCATTCATTATCCTCGAAGCACACCACAAATGTGGCCAGACTTGATTAGGAAGTCAAAGGAAGGTGGACTCGATGCCATTGAGACCTATGTCTTCTGGAATGCGCATGAACCAGTTCGTCGTGAATACAATTTTACTGGTAATCTTGACCTAGTTAGGTTTCTCAAAACTGTTCAAGAGGAAGGACTTTATGCTGTTCTTCGGATTGGTCCATATGTTTGTGCTGAATGGAATTATGGAGGACTTCCTGTTTGGCTCCATAACCTTCCGAACTGCCAGATTCGAACAGAAAACGATGTGTTCATGAATGAGATGAAGAATTTCACTACTTTGATCGTGGATATGATGAAGAAGGAGAAACTATTTGCATCTCAAGGAGGCCCTATCATTATTGCTCAGATTGAAAATGAATATGGGAATGTGGAGTCATACTATGGTGATGCTGGTAAAGCATACATCAACTGGTGTGCAGATTTTGCTGAATCGCTGAACATTGGAGTTCCATGGATTATGTGTCAACAACCAGATGCTCCAGCATCAATGATAAACACATGCAATGGCTGGTATTGTGATAAATTTAAGCCAAGTAACCCCAACACTCCTAAGATGTGGACTGAAAACTGGACTGGCTGGTTCAAGAGCTGGGGTGGTTTAGATCCACTCAGAACTGCCGAGGACGTTGCCTTTGCTGTTGCAAGGTTTTTCCAATATGGAGGCACATTCCAGAACTATTACATGTATCATGGTGGAACAAACTTTGGTAGAACAGCAGCTTCTTACATAACCACCTCGTATGATTATGATGCGCCTCTTGATGAGTATGGTCATCTGAATCAACCAAAATGGGGGCATTTGAAAGAGCTTCATGAGGTTTTGAAATCCATGGAACATACTCTCACCTATGGCAATATTACCACCACAGAATTGGGTAACTCTGTCTCGACCACTGTGTTTGCAACAAATGAGTCCAGTAGCTGCATTTTTGGCAATGCAAATAACAGTGCTGATGCTACAATCACTTTCCAAGGAAAAACACACATCGTTCCGGCTTGGTCTGTTAGTATTCTTCCTGATTGCAAAGAAGAAGCATACAACACTGCTAAGGTAAACACCCAAACTACACTTAAAGTAAAAAGTGTGAACAAGGCTGAGGATGAACCTCAATCTCTTCAATGGTCATGGAGGCCCGAGAGGATTGACACCGAGCTTCTTGGCAAAGGTGAAGTTGTGGCAAATCTTCTTATGGAACAAAAAGAAGCTGCAAATGATGCTAGTGATTATCTTTGGTACATGACAAGTGTTCAAATCAGTAAGGATGATCCAGTTTTGATTGGAAACATGACATTGAGGATAAATGAAACTGGTTACATTCTTCATGCTTATGTTAATGGAGAACATGTTGGTTCCCAATGGGCCAAATATAACGTCTTCAACTACGTTTTCGAGAAACCTATCAAGTTGGTTCCCGGAGTGAACACAATTTCATTGCTCAGTGCTACTGTTGGATTTCCGAATTATGGAGGTGGTTTCGAGGACATCAAGACTGGAATTATTGGTCCTGTTGAATTGGTTGGACAAAATGGAGATGAAACAGTGATCAAGAATTTGTCTGAGCGCAAATGGTCGTACAAGGTTGGACTCCATGGCATGAATGACCAGCTCTTTAGCTCTGCTTCTCGTAAATGGTCAGTTGAAGGTGTACCAGAAAACAGGACGATGACTTGGTATAAGACCACTTTCAAAGCTCCCCTAGGAACTGAACCAGTCGTGGTGGACTTACAAGGGTTGGGTAAAGGCCATGCTTGGGTGAATGGTCATAGCATTGGGCGATATTGGCCAAGTTACTTGGCTCCAGAAGATGGCTGCAGTGTTGAGGCTTGTGACTACCGTGGTACATACGATAACAACAAGTGTGTATTCAACTGTGGCAAACCAACTCAAAGATGGTATCATGTTCCGCGATCCTTTTTACAAGATGATGAGAACACGTTGGTCTTGTTCGAGGAATTTGGAGGCAATCCATCATATGTGAATTTCCAAACAATCAGAGTTGGAACAATCTGTGCAAATGCATATGAGAATCACACATTGGAACTAGCATGCCAAGGTCGTTCCATTTCAGCTATCAAGTTTGCAAGCTTTGGAAACCCTGAAGGAACTTGTGGATCATTTAAGGAAGGCACCTGTGACAGCAAAACTGCTTTGTCCATCCTTCAAAAGGAATGTGTTGGAAAAGAGGCGTGTTCAATTGACGTATCAGAAAGCATGTTTGGTTCCACAACTTGTGGCGGTATTGTGAAAAGGTTGGCCGTGGAGGCAGTTTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0015925 GO:0016787 GO:0016798 GO:0030312 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BetaGal_dom4_5 Gal_Lectin Glyco_hydro_35

Protein Analysis

824

Amino Acids

91.92

Weight (kDa)

5.43

Isoelectric Point (pI)

33.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_35	PF01301	36 - 338	2.4e-119	Glycosyl hydrolases family 35
GHD	PF17834	363 - 417	1.7e-21	Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd	PF21467	621 - 710	2.7e-25	Beta-galactosidase, galactose-binding domain
SUEL_Lectin	PF02140	747 - 823	2.3e-19	D-galactoside/L-rhamnose binding SUEL lectin domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001959)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31740 AT2G04060 AT5G20710 AT5G20710
fragaria_vesca	FvH4_1g09120 FvH4_1g09190 FvH4_1g09190 FvH4_1g26380
malus_domestica	MD02G1096400.v1.1 MD03G1276000.v1.1 MD15G1220900.v1.1 MD15G1221000.v1.1
prunus_persica	Prupe.7G194500_v2.0.a1
pyrus_communis	pycom02g07640
rosa_chinensis	RchiOBHm_Chr2g0095511 RchiOBHm_Chr2g0095591 RchiOBHm_Chr5g0030701
rosa_laevigata	RLG00000016574 RLG00000016582 RLG00000016583
rosa_multiflora	Rmu_co8462209.1_g000001 Rmu_sc0003238.1_g000025 Rmu_sc0003238.1_g000028 Rmu_sc0004719.1_g000009
rosa_roxburghii	Rroxscaffold_2G00146240
rosa_rugosa	Rorug02G0051800 Rorug02G0052600 Rorug05G0120200
rosa_samantha	Rh2AG099800 Rh2AG100400 Rh2BG101100 Rh2BG102200 Rh2CG103300 Rh2CG104600 Rh2DG100700 Rh2DG101500 Rh5AG211800 Rh5BG210700 Rh5CG234400 Rh5CG234500 Rh5DG216100
rosa_wichuraiana	Rw2G007570 Rw2G007630 Rw2G007640 Rw5G019420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	249
AccB1I	GGYRCC	1 cut(s)	2324
AccB7I	CCANNNNNTGG	1 cut(s)	2003
AccII	CGCG	1 cut(s)	2104
AciI	CCGC	2 cut(s)	2102, 2433
AclWI	GGATC	5 cut(s)	46, 794, 1457, 2100, 2317
AcoI	YGGCCR	3 cut(s)	179, 1979, 2451
AcsI	RAATTY	5 cut(s)	463, 719, 1747, 2150, 2176
AcuI	CTGAAG	1 cut(s)	2316
AfaI	GTAC	4 cut(s)	1433, 1772, 1845, 2038
AfiI	CCNNNNNNNGG	5 cut(s)	989, 1661, 1948, 2003, 2362
AflIII	ACRYGT	3 cut(s)	879, 1540, 2130
AjuI	GAANNNNNNNTTGG	4 cut(s)	2216, 2248, 2397, 2429
AleI	CACNNNNGTG	1 cut(s)	175
AloI	GAACNNNNNNTCC	2 cut(s)	128, 160
Alw26I	GTCTC	2 cut(s)	221, 1087
AlwI	GGATC	5 cut(s)	46, 794, 1457, 2100, 2317
AlwNI	CAGNNNCTG	1 cut(s)	1119
Ama87I	CYCGRG	1 cut(s)	1331
AoxI	GGCC	7 cut(s)	179, 523, 1328, 1557, 1939, 1979, 2451
ApeKI	GCWGC	4 cut(s)	914, 1119, 1403, 2007
ApoI	RAATTY	5 cut(s)	463, 719, 1747, 2150, 2176
ArsI	GACNNNNNNTTYG	6 cut(s)	378, 410, 812, 844, 1554, 1586
Asp700I	GAANNNNTTC	2 cut(s)	258, 464
AspA2I	CCTAGG	1 cut(s)	1894
AspLEI	GCGC	3 cut(s)	250, 952, 1761
AspS9I	GGNCC	5 cut(s)	353, 524, 1329, 1557, 1700
AsuC2I	CCSGG	1 cut(s)	1611
AsuHPI	GGTGA	4 cut(s)	593, 1033, 1376, 1963
AsuII	TTCGAA	1 cut(s)	427
AvaI	CYCGRG	1 cut(s)	1331
AvaII	GGWCC	2 cut(s)	353, 1700
AvrII	CCTAGG	1 cut(s)	1894
BalI	TGGCCA	2 cut(s)	181, 1981
BanI	GGYRCC	1 cut(s)	2324
BbsI	GAAGAC	2 cut(s)	229, 1564
BbvCI	CCTCAGC	1 cut(s)	1293
BbvI	GCAGC	4 cut(s)	926, 1106, 1390, 1994
BccI	CCATC	7 cut(s)	89, 110, 113, 1997, 2082, 2173, 2360
BceAI	ACGGC	1 cut(s)	2438
BcgI	CGANNNNNNTGC	2 cut(s)	806, 840
BclI	TGATCA	1 cut(s)	1740
BcnI	CCSGG	1 cut(s)	1611
BcoDI	GTCTC	2 cut(s)	221, 1087
BfaI	CTAG	4 cut(s)	296, 1416, 1895, 2240
BfmI	CTRYAG	1 cut(s)	2008
BglI	GCCNNNNNGGC	1 cut(s)	2459
BisI	GCNGC	4 cut(s)	915, 1120, 1404, 2008
BlnI	CCTAGG	1 cut(s)	1894
BlsI	GCNGC	4 cut(s)	916, 1121, 1405, 2009
Bme1390I	CCNGG	1 cut(s)	1611
Bme18I	GGWCC	2 cut(s)	353, 1700
BmeT110I	CYCGRG	1 cut(s)	1331
BmgT120I	GGNCC	5 cut(s)	353, 524, 1329, 1557, 1700
BmiI	GGNNCC	7 cut(s)	145, 401, 1549, 1608, 1995, 2326, 2419
BmrFI	CCNGG	1 cut(s)	1611
BmsI	GCATC	8 cut(s)	208, 521, 574, 661, 689, 937, 1141, 1402
BoxI	GACNNNNGTC	1 cut(s)	233
BpiI	GAAGAC	2 cut(s)	229, 1564
BpmI	CTGGAG	3 cut(s)	43, 660, 1980
Bpu10I	CCTNAGC	2 cut(s)	1245, 1293
Bpu14I	TTCGAA	1 cut(s)	427
BpuEI	CTTGAG	1 cut(s)	501
BpuMI	CCSGG	1 cut(s)	1611
BsaI	GGTCTC	1 cut(s)	221
BsaJI	CCNNGG	9 cut(s)	647, 816, 1026, 1168, 1786, 1894, 2032, 2248, 2454
BsaXI	ACNNNNNCTCC	2 cut(s)	1527, 1557
Bsc4I	CCNNNNNNNGG	5 cut(s)	989, 1661, 1948, 2003, 2362
Bse3DI	GCAATG	3 cut(s)	706, 1138, 1628
BseDI	CCNNGG	9 cut(s)	647, 816, 1026, 1168, 1786, 1894, 2032, 2248, 2454
BseGI	GGATG	3 cut(s)	1303, 1465, 2352
BseLI	CCNNNNNNNGG	5 cut(s)	989, 1661, 1948, 2003, 2362
BseMI	GCAATG	3 cut(s)	706, 1138, 1628
BseMII	CTCAG	5 cut(s)	554, 820, 1284, 1648, 1746
BseXI	GCAGC	4 cut(s)	926, 1106, 1390, 1994
BseYI	CCCAGC	1 cut(s)	786
BsgI	GTGCAG	1 cut(s)	633
Bsh1236I	CGCG	1 cut(s)	2104
BshFI	GGCC	7 cut(s)	181, 525, 1330, 1559, 1941, 1981, 2453
BshNI	GGYRCC	1 cut(s)	2324
BsiHKCI	CYCGRG	1 cut(s)	1331
BsiSI	CCGG	2 cut(s)	1190, 1611
BslI	CCNNNNNNNGG	5 cut(s)	989, 1661, 1948, 2003, 2362
BsmAI	GTCTC	2 cut(s)	221, 1087
BsmI	GAATGC	1 cut(s)	250
BsnI	GGCC	7 cut(s)	181, 525, 1330, 1559, 1941, 1981, 2453
Bso31I	GGTCTC	1 cut(s)	221
BsoBI	CYCGRG	1 cut(s)	1331
Bsp119I	TTCGAA	1 cut(s)	427
Bsp143I	GATC	7 cut(s)	51, 477, 799, 1462, 1740, 2105, 2309
Bsp19I	CCATGG	3 cut(s)	647, 1026, 1786
BspACI	CCGC	2 cut(s)	2102, 2433
BspANI	GGCC	7 cut(s)	181, 525, 1330, 1559, 1941, 1981, 2453
BspCNI	CTCAG	5 cut(s)	553, 819, 1285, 1647, 1747
BspFNI	CGCG	1 cut(s)	2104
BspHI	TCATGA	2 cut(s)	447, 1009
BspLI	GGNNCC	7 cut(s)	145, 401, 1549, 1608, 1995, 2326, 2419
BspMAI	CTGCAG	1 cut(s)	2012
BspPI	GGATC	5 cut(s)	46, 794, 1457, 2100, 2317
BspT104I	TTCGAA	1 cut(s)	427
BspT107I	GGYRCC	1 cut(s)	2324
BspTNI	GGTCTC	1 cut(s)	221
BsrDI	GCAATG	3 cut(s)	706, 1138, 1628
BssECI	CCNNGG	9 cut(s)	647, 816, 1026, 1168, 1786, 1894, 2032, 2248, 2454
BssMI	GATC	7 cut(s)	51, 477, 799, 1462, 1740, 2105, 2309
BssT1I	CCWWGG	6 cut(s)	647, 1026, 1168, 1786, 1894, 2248
Bst4CI	ACNGT	7 cut(s)	316, 1093, 1145, 1645, 1738, 2033, 2069
Bst6I	CTCTTC	1 cut(s)	1317
BstAPI	GCANNNNNTGC	2 cut(s)	620, 1412
BstBI	TTCGAA	1 cut(s)	427
BstC8I	GCNNGC	2 cut(s)	2245, 2281
BstDEI	CTNAG	7 cut(s)	540, 747, 806, 1245, 1293, 1634, 1755
BstDSI	CCRYGG	5 cut(s)	647, 1026, 1786, 2032, 2454
BstENI	CCTNNNNNAGG	1 cut(s)	2360
BstF5I	GGATG	3 cut(s)	1303, 1465, 2352
BstFNI	CGCG	1 cut(s)	2104
BstHHI	GCGC	3 cut(s)	250, 952, 1761
BstKTI	GATC	7 cut(s)	54, 480, 802, 1465, 1743, 2108, 2312
BstMAI	GTCTC	2 cut(s)	221, 1087
BstMBI	GATC	7 cut(s)	51, 477, 799, 1462, 1740, 2105, 2309
BstMWI	GCNNNNNNNGC	6 cut(s)	593, 620, 1128, 1412, 1978, 2459
BstNSI	RCATGY	5 cut(s)	699, 883, 1544, 2247, 2413
BstPAI	GACNNNNGTC	1 cut(s)	233
BstSCI	CCNGG	1 cut(s)	1609
BstSFI	CTRYAG	1 cut(s)	2008
BstUI	CGCG	1 cut(s)	2104
BstV1I	GCAGC	4 cut(s)	926, 1106, 1390, 1994
BstV2I	GAAGAC	2 cut(s)	229, 1564
BstX2I	RGATCY	1 cut(s)	799
BstXI	CCANNNNNNTGG	2 cut(s)	177, 1069
BstYI	RGATCY	1 cut(s)	799
BsuRI	GGCC	7 cut(s)	181, 525, 1330, 1559, 1941, 1981, 2453
BtgI	CCRYGG	5 cut(s)	647, 1026, 1786, 2032, 2454
BtsCI	GGATG	3 cut(s)	1303, 1465, 2352
BtsI	GCAGTG	2 cut(s)	1239, 2017
BtsIMutI	CAGTG	6 cut(s)	1089, 1150, 1239, 1642, 1743, 2017
Cac8I	GCNNGC	2 cut(s)	2245, 2281
CaiI	CAGNNNCTG	1 cut(s)	1119
CciI	TCATGA	2 cut(s)	447, 1009
CfoI	GCGC	3 cut(s)	250, 952, 1761
Cfr13I	GGNCC	5 cut(s)	353, 524, 1329, 1557, 1700
Csp6I	GTAC	4 cut(s)	1432, 1771, 1844, 2037
CspCI	CAANNNNNGTGG	2 cut(s)	1078, 1113
CviQI	GTAC	4 cut(s)	1432, 1771, 1844, 2037
DdeI	CTNAG	7 cut(s)	540, 747, 806, 1245, 1293, 1634, 1755
DpnI	GATC	7 cut(s)	53, 479, 801, 1464, 1742, 2107, 2311
DpnII	GATC	7 cut(s)	51, 477, 799, 1462, 1740, 2105, 2309
EaeI	YGGCCR	3 cut(s)	179, 1979, 2451
Eam1104I	CTCTTC	1 cut(s)	1317
EarI	CTCTTC	1 cut(s)	1317
Eco130I	CCWWGG	6 cut(s)	647, 1026, 1168, 1786, 1894, 2248
Eco31I	GGTCTC	1 cut(s)	221
Eco47I	GGWCC	2 cut(s)	353, 1700
Eco57I	CTGAAG	1 cut(s)	2316
Eco88I	CYCGRG	1 cut(s)	1331
EcoNI	CCTNNNNNAGG	1 cut(s)	2360
EcoO109I	RGGNCCY	1 cut(s)	524
EcoT14I	CCWWGG	6 cut(s)	647, 1026, 1168, 1786, 1894, 2248
EcoT22I	ATGCAT	1 cut(s)	2218
ErhI	CCWWGG	6 cut(s)	647, 1026, 1168, 1786, 1894, 2248
FauNDI	CATATG	3 cut(s)	358, 2170, 2218
FbaI	TGATCA	1 cut(s)	1740
Fnu4HI	GCNGC	4 cut(s)	915, 1120, 1404, 2008
FokI	GGATG	3 cut(s)	1310, 1472, 2339
Fsp4HI	GCNGC	4 cut(s)	915, 1120, 1404, 2008
FspAI	RTGCGCAY	1 cut(s)	249
FspBI	CTAG	4 cut(s)	296, 1416, 1895, 2240
FspI	TGCGCA	1 cut(s)	249
GlaI	GCGC	3 cut(s)	249, 951, 1760
GluI	GCNGC	4 cut(s)	915, 1120, 1404, 2008
GsaI	CCCAGC	1 cut(s)	790
GsuI	CTGGAG	3 cut(s)	43, 660, 1980
HaeIII	GGCC	7 cut(s)	181, 525, 1330, 1559, 1941, 1981, 2453
HapII	CCGG	2 cut(s)	1190, 1611
HhaI	GCGC	3 cut(s)	250, 952, 1761
Hin6I	GCGC	3 cut(s)	248, 950, 1759
HinP1I	GCGC	3 cut(s)	248, 950, 1759
HincII	GTYRAC	1 cut(s)	662
HindII	GTYRAC	1 cut(s)	662
HindIII	AAGCTT	1 cut(s)	2281
HinfI	GANTC	8 cut(s)	213, 424, 569, 626, 976, 1109, 1782, 2224
HpaII	CCGG	2 cut(s)	1190, 1611
HphI	GGTGA	4 cut(s)	593, 1033, 1376, 1963
Hpy166II	GTNNAC	8 cut(s)	212, 662, 756, 1252, 1285, 1618, 1844, 1918
Hpy188I	TCNGA	9 cut(s)	348, 414, 543, 809, 975, 1656, 1756, 2192, 2404
Hpy8I	GTNNAC	8 cut(s)	212, 662, 756, 1252, 1285, 1618, 1844, 1918
Hpy99I	CGWCG	1 cut(s)	267
HpyAV	CCTTC	9 cut(s)	120, 200, 320, 419, 490, 1832, 2291, 2315, 2366
HpyCH4III	ACNGT	7 cut(s)	316, 1093, 1145, 1645, 1738, 2033, 2069
HpyCH4IV	ACGT	6 cut(s)	84, 822, 1569, 1581, 2132, 2397
HpyF10VI	GCNNNNNNNGC	6 cut(s)	593, 620, 1128, 1412, 1978, 2459
HpyF3I	CTNAG	7 cut(s)	540, 747, 806, 1245, 1293, 1634, 1755
HpySE526I	ACGT	6 cut(s)	84, 822, 1569, 1581, 2132, 2397
HspAI	GCGC	3 cut(s)	248, 950, 1759
Ksp22I	TGATCA	1 cut(s)	1740
Kzo9I	GATC	7 cut(s)	51, 477, 799, 1462, 1740, 2105, 2309
LmnI	GCTCC	4 cut(s)	405, 679, 1894, 1999
Lsp1109I	GCAGC	4 cut(s)	926, 1106, 1390, 1994
LweI	GCATC	8 cut(s)	208, 521, 574, 661, 689, 937, 1141, 1402
MaeI	CTAG	4 cut(s)	296, 1416, 1895, 2240
MaeII	ACGT	6 cut(s)	84, 822, 1569, 1581, 2132, 2397
MaeIII	GTNAC	6 cut(s)	731, 1073, 1508, 1985, 2024, 2330
MalI	GATC	7 cut(s)	53, 479, 801, 1464, 1742, 2107, 2311
MboI	GATC	7 cut(s)	51, 477, 799, 1462, 1740, 2105, 2309
MfeI	CAATTG	1 cut(s)	2391
MflI	RGATCY	1 cut(s)	799
MlsI	TGGCCA	2 cut(s)	181, 1981
MluNI	TGGCCA	2 cut(s)	181, 1981
MlyI	GAGTC	4 cut(s)	207, 578, 1118, 1776
MmeI	TCCRAC	5 cut(s)	1627, 1696, 1759, 2176, 2353
Mox20I	TGGCCA	2 cut(s)	181, 1981
Mph1103I	ATGCAT	1 cut(s)	2218
MroXI	GAANNNNTTC	2 cut(s)	258, 464
MscI	TGGCCA	2 cut(s)	181, 1981
MseI	TTAA	5 cut(s)	723, 1269, 1530, 2316, 2470
MslI	CAYNNNNRTG	2 cut(s)	175, 1524
Msp20I	TGGCCA	2 cut(s)	181, 1981
MspI	CCGG	2 cut(s)	1190, 1611
MspR9I	CCNGG	1 cut(s)	1611
MunI	CAATTG	1 cut(s)	2391
Mva1269I	GAATGC	1 cut(s)	250
MvnI	CGCG	1 cut(s)	2104
MwoI	GCNNNNNNNGC	6 cut(s)	593, 620, 1128, 1412, 1978, 2459
NciI	CCSGG	1 cut(s)	1611
NcoI	CCATGG	3 cut(s)	647, 1026, 1786
NdeI	CATATG	3 cut(s)	358, 2170, 2218
NdeII	GATC	7 cut(s)	51, 477, 799, 1462, 1740, 2105, 2309
NlaIV	GGNNCC	7 cut(s)	145, 401, 1549, 1608, 1995, 2326, 2419
NmeAIII	GCCGAG	1 cut(s)	841
NmuCI	GTSAC	2 cut(s)	2024, 2330
NsbI	TGCGCA	1 cut(s)	249
NsiI	ATGCAT	1 cut(s)	2218
NspI	RCATGY	5 cut(s)	699, 883, 1544, 2247, 2413
NspV	TTCGAA	1 cut(s)	427
OliI	CACNNNNGTG	1 cut(s)	175
PaeI	GCATGC	1 cut(s)	2247
PagI	TCATGA	2 cut(s)	447, 1009
PciI	ACATGT	2 cut(s)	879, 1540
PctI	GAATGC	1 cut(s)	250
PdmI	GAANNNNTTC	2 cut(s)	258, 464
PfeI	GAWTC	4 cut(s)	424, 626, 976, 2224
PflMI	CCANNNNNTGG	1 cut(s)	2003
PfoI	TCCNGGA	1 cut(s)	1609
PkrI	GCNGC	4 cut(s)	916, 1121, 1405, 2009
PleI	GAGTC	4 cut(s)	207, 577, 1117, 1776
PpsI	GAGTC	4 cut(s)	207, 577, 1117, 1776
PscI	ACATGT	2 cut(s)	879, 1540
PshAI	GACNNNNGTC	1 cut(s)	233
PspFI	CCCAGC	1 cut(s)	786
PspN4I	GGNNCC	7 cut(s)	145, 401, 1549, 1608, 1995, 2326, 2419
PspPI	GGNCC	5 cut(s)	353, 524, 1329, 1557, 1700
PstI	CTGCAG	1 cut(s)	2012
PstNI	CAGNNNCTG	1 cut(s)	1119
PsuI	RGATCY	1 cut(s)	799
RsaI	GTAC	4 cut(s)	1433, 1772, 1845, 2038
RsaNI	GTAC	4 cut(s)	1432, 1771, 1844, 2037
RseI	CAYNNNNRTG	2 cut(s)	175, 1524
SaqAI	TTAA	5 cut(s)	723, 1269, 1530, 2316, 2470
SatI	GCNGC	4 cut(s)	915, 1120, 1404, 2008
Sau3AI	GATC	7 cut(s)	51, 477, 799, 1462, 1740, 2105, 2309
Sau96I	GGNCC	5 cut(s)	353, 524, 1329, 1557, 1700
SchI	GAGTC	4 cut(s)	207, 578, 1118, 1776
ScrFI	CCNGG	1 cut(s)	1611
SfaNI	GCATC	8 cut(s)	208, 521, 574, 661, 689, 937, 1141, 1402
SfcI	CTRYAG	1 cut(s)	2008
SfuI	TTCGAA	1 cut(s)	427
SinI	GGWCC	2 cut(s)	353, 1700
SmiMI	CAYNNNNRTG	2 cut(s)	175, 1524
SmlI	CTYRAG	1 cut(s)	516
SmoI	CTYRAG	1 cut(s)	516
SphI	GCATGC	1 cut(s)	2247
SsiI	CCGC	2 cut(s)	2102, 2433
SspI	AATATT	1 cut(s)	1054
SspMI	CTAG	4 cut(s)	296, 1416, 1895, 2240
StyD4I	CCNGG	1 cut(s)	1609
StyI	CCWWGG	6 cut(s)	647, 1026, 1168, 1786, 1894, 2248
TaaI	ACNGT	7 cut(s)	316, 1093, 1145, 1645, 1738, 2033, 2069
TaiI	ACGT	6 cut(s)	87, 825, 1572, 1584, 2135, 2400
TaqI	TCGA	7 cut(s)	160, 216, 427, 1085, 1587, 1674, 2145
TfiI	GAWTC	4 cut(s)	424, 626, 976, 2224
Tru1I	TTAA	5 cut(s)	723, 1269, 1530, 2316, 2470
Tru9I	TTAA	5 cut(s)	723, 1269, 1530, 2316, 2470
TscAI	CASTG	6 cut(s)	1096, 1150, 1246, 1642, 1743, 2017
TseFI	GTSAC	2 cut(s)	2024, 2330
TseI	GCWGC	4 cut(s)	914, 1119, 1403, 2007
Tsp45I	GTSAC	2 cut(s)	2024, 2330
TspRI	CASTG	6 cut(s)	1096, 1150, 1246, 1642, 1743, 2017
Van91I	CCANNNNNTGG	1 cut(s)	2003
VpaK11BI	GGWCC	2 cut(s)	353, 1700
XagI	CCTNNNNNAGG	1 cut(s)	2360
XapI	RAATTY	5 cut(s)	463, 719, 1747, 2150, 2176
XceI	RCATGY	5 cut(s)	699, 883, 1544, 2247, 2413
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1066, 2085
XmaJI	CCTAGG	1 cut(s)	1894
XmnI	GAANNNNTTC	2 cut(s)	258, 464
XspI	CTAG	4 cut(s)	296, 1416, 1895, 2240
Zsp2I	ATGCAT	1 cut(s)	2218

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.