RchiOBHm_Chr5g0030701

beta-galactosidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0001959
Physical Location & Seq
Forward (+)
24337495 .. 24342270
4776 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31002

Sequence Viewer

Length: 2256 bp
ATGTGGCAACTGTGCGTCGATCATGATGGAAGAGCCATCACAATTAATGGTGATAGAAGAATCATAATATCTGGCTCTATTCAGTACCCACGTAGTACTCCTGAAATGTGGCCTGACTTAATCCAAAAGGAAAAAGATGGAGGCCTTAATGCCATTGAGACTTATGTCTTTTGGAATGCACATGAACCTCTGCGTAGGCAGTATGACTTTTCAGGAAACCAGGACCTGGTGAGATTCATTCAGTCCATCCAAAAGGCAGGGCTCTATGCTGTTCTTCGGATTGGACCATATGTTTGTGCAGAATGGAATTATGGAGGTTTTCCAGTGTGGCTGCATAACATACCAGGCATCAAATTGAGAACAAACAATGATATCTATAAGAATGAGATGCAAAACTTTACAACTTTGATAGTGGACATGATGAAGTACGAGAATCTTTTTGCTTCACAAGGGGGACCTATTATACTTGCCCAGATTGAAAACGAGTATGGGAATGTTATGCGCTCGTATGGCGATGAAGGAAAGAAATATATACGATGGTGTGCTGATTTAGCTGAATCTTACCAGATTGGTGTACCATGGATTCTGTGCCAACAGGAAGATACTCCACAATCAATGATTAATACTTGCAATGGCTGGTATTGTGATCAATTTAAGCCTTCATACAACACTAGCCCGAAGATGTGGACAGAAAATTGGACTGGATGGTTCAAGGATTGGGGCATGCAAGATCCACACAGAACTGCAGAGGATCTCGCCTTTTCTGTTGCACGATTCTTTCAGTTAATGTACCATGGAGGAACAAATTTCGGTCGTTCAGCAGGAGGTCCTTACATCACCACATCACATGATTATGATGCACCATTAGATGAATATGGTAATTTGAATCAACCCAAGTGGGGGCATCTTAAAGAGCTTCATAAACATATAAGATCAATGGAGAAAGTTCTGACTTATGGTGACGTAAGACAGGTTGACTATGGAAACAGCTCGAGTGTGACAGAGTACAGTTACAGAGGAAATCGATCCTGTTTCATTAGTAACGCAAACACAACAAGCAATGTAATAGTGAACTTTGAGAATAATAAGTATTCTGTTCCTGCTTGGTCTGTTACTATCCTTCCTGATTGCTATACTGAAGTCTACAACACTGCAAAGGTGCTAAATGAAGCCGATGCTAACGATCCAGAGGAACCTTATGGTTTAGTTTGGGGTTGGAGGGCTGAGCACTTTACACACCTCAAGGAAAATGGCTCAGTTCTGCATAGCAATCTCACGACTAATCAACTCCTTGATCAGAAAGTAGTAACAAATGATACCAGTGATTACTTGTGGTACATTACCAGTCTGGATCACAATGCAACTGATCCCAATTGGTCCGGCAAAGAAATTATGCTGAGAGTGAATACCAGTGGACATGTCCTCCATGCTTTTGTTAATGGAAAACACATAGGGACTGAAGTTTCTGGACAACATTTCAACCCCTTCACTTTAGAGAGAAAGATTAAGCTAAAGCATGGAAAGAATGATTTATCTCTACCTAGTGTCACGGTTGGCTTGAAAAATTATGATCCACTCTTTGATGAAGTCAATGTTGGGATTCATGGTCCTGTTCAACTGATTGGCAAGTACAAGAATGGTACTGAGGTGACAAAGGACTTGAGCAAAAATGAGTGGATATATAAGGTTGGACTTGCTGGAGAAGAAAAGGGCCTTTACCAAATTACTGCTCCTCTTGGGACCGATCCAATTGTGGTGGATTTAATGGGTTTAGGAAAGGGTCATGCTTGGGTGAACGGTCGAAGCATTGGCAGGTATTGGACAAGTCACACTGCAGATGAAAATGGTTGTACAGAAAATTGCGACTATCGTGGAACTTACAGCAATAAGAAGTGCTTGACTAATTGTGGGAAACCTTCCCAAAGATGGTACCATATACCGCGATCTTTCCTCCAAGATGACAATAATGCACTAGTTCTCTTTGAGGAGTTTGGAGGCCAGCCGTTCAATGTTGAATTTCAGACTGTAACAGTTGCTAAAGCTTGCGCAAATGCTTACGAAGGTAATGTCTTGCACTTGTCATGCCAAGGAGGAAGAGTTTTATCCGATGTTAGATTTTCCAGCTTCGGTGATCCACAAGGCGCTTGTGGGGCATCCTTCACAAAAGGCGAGTGTGAATCCCCCACAGCTTTATCATACATCCAAAAGGCATGCATTGGCAAAGCAGAATGTTTTATCGATGGCTCTGAATTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Gal_Lectin Glyco_hydro_35

Protein Analysis

751

Amino Acids

84.95

Weight (kDa)

5.77

Isoelectric Point (pI)

31.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_35 PF01301 13 - 309 4.1e-111 Glycosyl hydrolases family 35
GHD PF17834 333 - 387 2.9e-21 Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd PF21467 575 - 656 4.2e-18 Beta-galactosidase, galactose-binding domain
SUEL_Lectin PF02140 693 - 747 7.9e-09 D-galactoside/L-rhamnose binding SUEL lectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2047
Acc36I ACCTGC 1 cut(s) 1803
Acc65I GGTACC 1 cut(s) 1929
AccB1I GGYRCC 1 cut(s) 1929
AccB7I CCANNNNNTGG 1 cut(s) 226
AccI GTMKAC 1 cut(s) 1143
AccII CGCG 1 cut(s) 1942
AciI CCGC 1 cut(s) 1940
AclWI GGATC 9 cut(s) 725, 759, 1020, 1178, 1359, 1361, 1565, 1739, 2126
AcsI RAATTY 3 cut(s) 805, 2015, 2249
AcuI CTGAAG 2 cut(s) 1158, 1479
AfiI CCNNNNNNNGG 4 cut(s) 226, 899, 900, 1926
AflIII ACRYGT 1 cut(s) 1417
AgsI TTSAA 8 cut(s) 479, 712, 886, 1480, 1561, 1616, 2008, 2015
AhlI ACTAGT 1 cut(s) 1972
AjnI CCWGG 3 cut(s) 219, 225, 343
AjuI GAANNNNNNNTTGG 2 cut(s) 1578, 1610
AluBI AGCT 7 cut(s) 554, 916, 990, 1510, 2042, 2124, 2189
AluI AGCT 7 cut(s) 554, 916, 990, 1510, 2042, 2124, 2189
Alw21I GWGCWC 1 cut(s) 1230
Alw26I GTCTC 1 cut(s) 152
AlwI GGATC 9 cut(s) 725, 759, 1020, 1178, 1359, 1361, 1565, 1739, 2126
AlwNI CAGNNNCTG 1 cut(s) 226
Ama87I CYCGRG 1 cut(s) 991
AoxI GGCC 4 cut(s) 110, 142, 1711, 1996
ApeKI GCWGC 1 cut(s) 331
ApoI RAATTY 3 cut(s) 805, 2015, 2249
ArsI GACNNNNNNTTYG 4 cut(s) 276, 308, 2052, 2084
AseI ATTAAT 2 cut(s) 45, 621
Asp718I GGTACC 1 cut(s) 1929
AspLEI GCGC 3 cut(s) 504, 2048, 2144
AspS9I GGNCC 8 cut(s) 223, 284, 455, 827, 1377, 1607, 1711, 1740
AsuHPI GGTGA 7 cut(s) 62, 241, 829, 971, 1660, 1804, 2141
AvaI CYCGRG 1 cut(s) 991
AvaII GGWCC 7 cut(s) 223, 284, 455, 827, 1377, 1607, 1740
BaeI ACNNNNGTAYC 2 cut(s) 1632, 1665
BanI GGYRCC 1 cut(s) 1929
BanII GRGCYC 1 cut(s) 264
Bbv12I GWGCWC 1 cut(s) 1230
BbvI GCAGC 1 cut(s) 318
BccI CCATC 8 cut(s) 20, 44, 131, 254, 531, 699, 1920, 2234
BceAI ACGGC 1 cut(s) 1987
BciT130I CCWGG 3 cut(s) 221, 227, 345
BclI TGATCA 2 cut(s) 646, 1294
BcoDI GTCTC 1 cut(s) 152
BcuI ACTAGT 1 cut(s) 1972
BfaI CTAG 3 cut(s) 672, 1542, 1973
BfmI CTRYAG 2 cut(s) 744, 1833
BfoI RGCGCY 1 cut(s) 2145
BfuAI ACCTGC 1 cut(s) 1803
BisI GCNGC 1 cut(s) 332
BlpI GCTNAGC 1 cut(s) 1224
BlsI GCNGC 1 cut(s) 333
BmcAI AGTACT 1 cut(s) 97
Bme1390I CCNGG 3 cut(s) 221, 227, 345
Bme18I GGWCC 7 cut(s) 223, 284, 455, 827, 1377, 1607, 1740
BmeT110I CYCGRG 1 cut(s) 991
BmgT120I GGNCC 8 cut(s) 223, 284, 455, 827, 1377, 1607, 1711, 1740
BmiI GGNNCC 4 cut(s) 456, 1194, 1741, 1931
BmrFI CCNGG 3 cut(s) 221, 227, 345
BmsI GCATC 6 cut(s) 357, 378, 847, 913, 1165, 2162
BoxI GACNNNNGTC 1 cut(s) 164
BpmI CTGGAG 1 cut(s) 1719
Bpu1102I GCTNAGC 1 cut(s) 1224
BpuEI CTTGAG 2 cut(s) 1226, 1681
Bsa29I ATCGAT 2 cut(s) 1024, 2238
BsaAI YACGTR 1 cut(s) 92
BsaJI CCNNGG 3 cut(s) 578, 793, 2086
BsaXI ACNNNNNCTCC 4 cut(s) 1407, 1437, 2082, 2112
Bsc4I CCNNNNNNNGG 4 cut(s) 226, 899, 900, 1926
Bse1I ACTGG 5 cut(s) 323, 706, 1320, 1344, 1410
Bse3DI GCAATG 2 cut(s) 637, 1066
BseBI CCWGG 3 cut(s) 221, 227, 345
BseCI ATCGAT 2 cut(s) 1024, 2238
BseDI CCNNGG 3 cut(s) 578, 793, 2086
BseGI GGATG 4 cut(s) 246, 710, 2153, 2199
BseLI CCNNNNNNNGG 4 cut(s) 226, 899, 900, 1926
BseMI GCAATG 2 cut(s) 637, 1066
BseMII CTCAG 4 cut(s) 1215, 1269, 1388, 1635
BseNI ACTGG 5 cut(s) 323, 706, 1320, 1344, 1410
BseRI GAGGAG 2 cut(s) 1722, 2000
BseXI GCAGC 1 cut(s) 318
BsgI GTGCAG 1 cut(s) 318
Bsh1236I CGCG 1 cut(s) 1942
Bsh1285I CGRYCG 2 cut(s) 814, 1801
BshFI GGCC 4 cut(s) 112, 144, 1713, 1998
BshNI GGYRCC 1 cut(s) 1929
BshVI ATCGAT 2 cut(s) 1024, 2238
BsiEI CGRYCG 2 cut(s) 814, 1801
BsiHKAI GWGCWC 1 cut(s) 1230
BsiHKCI CYCGRG 1 cut(s) 991
BsiSI CCGG 1 cut(s) 1380
BslFI GGGAC 3 cut(s) 468, 1468, 1753
BslI CCNNNNNNNGG 4 cut(s) 226, 899, 900, 1926
BsmAI GTCTC 1 cut(s) 152
BsmFI GGGAC 3 cut(s) 468, 1468, 1753
BsmI GAATGC 1 cut(s) 181
BsnI GGCC 4 cut(s) 112, 144, 1713, 1998
BsoBI CYCGRG 1 cut(s) 991
Bsp1286I GDGCHC 2 cut(s) 264, 1230
Bsp1407I TGTACA 1 cut(s) 1850
Bsp1720I GCTNAGC 1 cut(s) 1224
Bsp19I CCATGG 2 cut(s) 578, 793
BspACI CCGC 1 cut(s) 1940
BspANI GGCC 4 cut(s) 112, 144, 1713, 1998
BspCNI CTCAG 4 cut(s) 1216, 1268, 1389, 1636
BspDI ATCGAT 2 cut(s) 1024, 2238
BspFNI CGCG 1 cut(s) 1942
BspHI TCATGA 1 cut(s) 22
BspLI GGNNCC 4 cut(s) 456, 1194, 1741, 1931
BspMAI CTGCAG 2 cut(s) 748, 1837
BspMI ACCTGC 1 cut(s) 1803
BspPI GGATC 9 cut(s) 725, 759, 1020, 1178, 1359, 1361, 1565, 1739, 2126
BspQI GCTCTTC 1 cut(s) 25
BspT107I GGYRCC 1 cut(s) 1929
BsrDI GCAATG 2 cut(s) 637, 1066
BsrGI TGTACA 1 cut(s) 1850
BsrI ACTGG 5 cut(s) 323, 706, 1320, 1344, 1410
BssECI CCNNGG 3 cut(s) 578, 793, 2086
BssT1I CCWWGG 3 cut(s) 578, 793, 2086
Bst2UI CCWGG 3 cut(s) 221, 227, 345
Bst4CI ACNGT 6 cut(s) 12, 1010, 1552, 1799, 2026, 2032
Bst6I CTCTTC 2 cut(s) 25, 2089
BstAUI TGTACA 1 cut(s) 1850
BstBAI YACGTR 1 cut(s) 92
BstC8I GCNNGC 4 cut(s) 725, 2000, 2044, 2212
BstDEI CTNAG 4 cut(s) 1224, 1255, 1397, 1644
BstDSI CCRYGG 2 cut(s) 578, 793
BstF5I GGATG 4 cut(s) 246, 710, 2153, 2199
BstFNI CGCG 1 cut(s) 1942
BstH2I RGCGCY 1 cut(s) 2145
BstHHI GCGC 3 cut(s) 504, 2048, 2144
BstMAI GTCTC 1 cut(s) 152
BstMCI CGRYCG 2 cut(s) 814, 1801
BstMWI GCNNNNNNNGC 3 cut(s) 510, 551, 2150
BstNI CCWGG 3 cut(s) 221, 227, 345
BstNSI RCATGY 3 cut(s) 727, 1421, 2214
BstPAI GACNNNNGTC 1 cut(s) 164
BstSCI CCNGG 3 cut(s) 219, 225, 343
BstSFI CTRYAG 2 cut(s) 744, 1833
BstUI CGCG 1 cut(s) 1942
BstV1I GCAGC 1 cut(s) 318
BstX2I RGATCY 2 cut(s) 730, 751
BstYI RGATCY 2 cut(s) 730, 751
Bsu15I ATCGAT 2 cut(s) 1024, 2238
BsuRI GGCC 4 cut(s) 112, 144, 1713, 1998
BsuTUI ATCGAT 2 cut(s) 1024, 2238
BtgI CCRYGG 2 cut(s) 578, 793
BtgZI GCGATG 1 cut(s) 528
BtsCI GGATG 4 cut(s) 246, 710, 2153, 2199
BtsI GCAGTG 2 cut(s) 1149, 1830
BtsIMutI CAGTG 5 cut(s) 330, 1149, 1327, 1417, 1830
BveI ACCTGC 1 cut(s) 1803
Cac8I GCNNGC 4 cut(s) 725, 2000, 2044, 2212
CaiI CAGNNNCTG 1 cut(s) 226
CciI TCATGA 1 cut(s) 22
CfoI GCGC 3 cut(s) 504, 2048, 2144
Cfr13I GGNCC 8 cut(s) 223, 284, 455, 827, 1377, 1607, 1711, 1740
ClaI ATCGAT 2 cut(s) 1024, 2238
CseI GACGC 1 cut(s) 4
CsiI ACCWGGT 1 cut(s) 225
CspCI CAANNNNNGTGG 4 cut(s) 878, 913, 1737, 1772
DdeI CTNAG 4 cut(s) 1224, 1255, 1397, 1644
Eam1104I CTCTTC 2 cut(s) 25, 2089
EarI CTCTTC 2 cut(s) 25, 2089
Eco130I CCWWGG 3 cut(s) 578, 793, 2086
Eco147I AGGCCT 1 cut(s) 144
Eco24I GRGCYC 1 cut(s) 264
Eco32I GATATC 1 cut(s) 373
Eco47I GGWCC 7 cut(s) 223, 284, 455, 827, 1377, 1607, 1740
Eco57I CTGAAG 2 cut(s) 1158, 1479
Eco88I CYCGRG 1 cut(s) 991
EcoO109I RGGNCCY 4 cut(s) 223, 455, 827, 1711
EcoRI GAATTC 1 cut(s) 2249
EcoRII CCWGG 3 cut(s) 219, 225, 343
EcoRV GATATC 1 cut(s) 373
EcoT14I CCWWGG 3 cut(s) 578, 793, 2086
EcoT22I ATGCAT 1 cut(s) 2216
EcoT38I GRGCYC 1 cut(s) 264
ErhI CCWWGG 3 cut(s) 578, 793, 2086
FalI AAGNNNNNCTT 2 cut(s) 1880, 1912
FaqI GGGAC 3 cut(s) 468, 1468, 1753
FauNDI CATATG 1 cut(s) 289
FbaI TGATCA 2 cut(s) 646, 1294
FblI GTMKAC 1 cut(s) 1143
Fnu4HI GCNGC 1 cut(s) 332
FokI GGATG 4 cut(s) 233, 717, 2140, 2186
FriOI GRGCYC 1 cut(s) 264
Fsp4HI GCNGC 1 cut(s) 332
FspBI CTAG 3 cut(s) 672, 1542, 1973
FspI TGCGCA 1 cut(s) 2047
GlaI GCGC 3 cut(s) 503, 2047, 2143
GluI GCNGC 1 cut(s) 332
GsuI CTGGAG 1 cut(s) 1719
HaeII RGCGCY 1 cut(s) 2145
HaeIII GGCC 4 cut(s) 112, 144, 1713, 1998
HapII CCGG 1 cut(s) 1380
HgaI GACGC 1 cut(s) 4
HhaI GCGC 3 cut(s) 504, 2048, 2144
Hin6I GCGC 3 cut(s) 502, 2046, 2142
HinP1I GCGC 3 cut(s) 502, 2046, 2142
HincII GTYRAC 1 cut(s) 976
HindII GTYRAC 1 cut(s) 976
HindIII AAGCTT 1 cut(s) 2040
HinfI GANTC 9 cut(s) 60, 234, 433, 557, 583, 774, 886, 1600, 2177
HpaII CCGG 1 cut(s) 1380
HphI GGTGA 7 cut(s) 62, 241, 829, 971, 1660, 1804, 2141
Hpy166II GTNNAC 8 cut(s) 415, 575, 687, 976, 1072, 1144, 1415, 1795
Hpy188I TCNGA 7 cut(s) 279, 951, 1299, 2022, 2107, 2248, 2255
Hpy188III TCNNGA 8 cut(s) 23, 101, 213, 1124, 1187, 1276, 1349, 1467
Hpy8I GTNNAC 8 cut(s) 415, 575, 687, 976, 1072, 1144, 1415, 1795
Hpy99I CGWCG 1 cut(s) 20
HpyAV CCTTC 7 cut(s) 512, 669, 1130, 1495, 1926, 2054, 2167
HpyCH4III ACNGT 6 cut(s) 12, 1010, 1552, 1799, 2026, 2032
HpyCH4IV ACGT 2 cut(s) 91, 963
HpyF10VI GCNNNNNNNGC 3 cut(s) 510, 551, 2150
HpyF3I CTNAG 4 cut(s) 1224, 1255, 1397, 1644
HpySE526I ACGT 2 cut(s) 91, 963
HspAI GCGC 3 cut(s) 502, 2046, 2142
KpnI GGTACC 1 cut(s) 1933
Ksp22I TGATCA 2 cut(s) 646, 1294
LguI GCTCTTC 1 cut(s) 25
LmnI GCTCC 1 cut(s) 1735
Lsp1109I GCAGC 1 cut(s) 318
LweI GCATC 6 cut(s) 357, 378, 847, 913, 1165, 2162
MabI ACCWGGT 1 cut(s) 225
MaeI CTAG 3 cut(s) 672, 1542, 1973
MaeII ACGT 2 cut(s) 91, 963
MboII GAAGA 7 cut(s) 42, 69, 266, 611, 691, 1715, 2106
MfeI CAATTG 2 cut(s) 1372, 1749
MflI RGATCY 2 cut(s) 730, 751
MhlI GDGCHC 2 cut(s) 264, 1230
MmeI TCCRAC 2 cut(s) 1196, 1669
Mph1103I ATGCAT 1 cut(s) 2216
MslI CAYNNNNRTG 1 cut(s) 852
MspI CCGG 1 cut(s) 1380
MspR9I CCNGG 3 cut(s) 221, 227, 345
MunI CAATTG 2 cut(s) 1372, 1749
Mva1269I GAATGC 1 cut(s) 181
MvaI CCWGG 3 cut(s) 221, 227, 345
MvnI CGCG 1 cut(s) 1942
MwoI GCNNNNNNNGC 3 cut(s) 510, 551, 2150
NcoI CCATGG 2 cut(s) 578, 793
NdeI CATATG 1 cut(s) 289
NlaIV GGNNCC 4 cut(s) 456, 1194, 1741, 1931
NmuCI GTSAC 5 cut(s) 959, 997, 1546, 1648, 1826
NsbI TGCGCA 1 cut(s) 2047
NsiI ATGCAT 1 cut(s) 2216
NspI RCATGY 3 cut(s) 727, 1421, 2214
PaeI GCATGC 2 cut(s) 727, 2214
PaeR7I CTCGAG 1 cut(s) 991
PagI TCATGA 1 cut(s) 22
PceI AGGCCT 1 cut(s) 144
PciI ACATGT 1 cut(s) 1417
PciSI GCTCTTC 1 cut(s) 25
PctI GAATGC 1 cut(s) 181
PfeI GAWTC 9 cut(s) 60, 234, 433, 557, 583, 774, 886, 1600, 2177
PflMI CCANNNNNTGG 1 cut(s) 226
PkrI GCNGC 1 cut(s) 333
Ppu21I YACGTR 1 cut(s) 92
PpuMI RGGWCCY 3 cut(s) 223, 455, 827
PscI ACATGT 1 cut(s) 1417
PshAI GACNNNNGTC 1 cut(s) 164
PshBI ATTAAT 2 cut(s) 45, 621
Psp5II RGGWCCY 3 cut(s) 223, 455, 827
Psp6I CCWGG 3 cut(s) 219, 225, 343
PspGI CCWGG 3 cut(s) 219, 225, 343
PspN4I GGNNCC 4 cut(s) 456, 1194, 1741, 1931
PspPI GGNCC 8 cut(s) 223, 284, 455, 827, 1377, 1607, 1711, 1740
PspPPI RGGWCCY 3 cut(s) 223, 455, 827
PspXI VCTCGAGB 1 cut(s) 991
PstI CTGCAG 2 cut(s) 748, 1837
PstNI CAGNNNCTG 1 cut(s) 226
PsuI RGATCY 2 cut(s) 730, 751
RseI CAYNNNNRTG 1 cut(s) 852
SapI GCTCTTC 1 cut(s) 25
SatI GCNGC 1 cut(s) 332
Sau96I GGNCC 8 cut(s) 223, 284, 455, 827, 1377, 1607, 1711, 1740
ScaI AGTACT 1 cut(s) 97
ScrFI CCNGG 3 cut(s) 221, 227, 345
SduI GDGCHC 2 cut(s) 264, 1230
SexAI ACCWGGT 1 cut(s) 225
SfaNI GCATC 6 cut(s) 357, 378, 847, 913, 1165, 2162
SfcI CTRYAG 2 cut(s) 744, 1833
Sfr274I CTCGAG 1 cut(s) 991
SinI GGWCC 7 cut(s) 223, 284, 455, 827, 1377, 1607, 1740
SlaI CTCGAG 1 cut(s) 991
SmiMI CAYNNNNRTG 1 cut(s) 852
SmlI CTYRAG 3 cut(s) 991, 1241, 1660
SmoI CTYRAG 3 cut(s) 991, 1241, 1660
SpeI ACTAGT 1 cut(s) 1972
SphI GCATGC 2 cut(s) 727, 2214
SseBI AGGCCT 1 cut(s) 144
SsiI CCGC 1 cut(s) 1940
SspMI CTAG 3 cut(s) 672, 1542, 1973
StuI AGGCCT 1 cut(s) 144
StyD4I CCNGG 3 cut(s) 219, 225, 343
StyI CCWWGG 3 cut(s) 578, 793, 2086
TaaI ACNGT 6 cut(s) 12, 1010, 1552, 1799, 2026, 2032
TaiI ACGT 2 cut(s) 94, 966
TaqI TCGA 5 cut(s) 18, 992, 1024, 1801, 2238
TaqII GACCGA 2 cut(s) 800, 1757
TatI WGTACW 4 cut(s) 95, 1005, 1629, 1850
TfiI GAWTC 9 cut(s) 60, 234, 433, 557, 583, 774, 886, 1600, 2177
TscAI CASTG 5 cut(s) 330, 1156, 1327, 1417, 1837
TseFI GTSAC 5 cut(s) 959, 997, 1546, 1648, 1826
TseI GCWGC 1 cut(s) 331
Tsp45I GTSAC 5 cut(s) 959, 997, 1546, 1648, 1826
TspRI CASTG 5 cut(s) 330, 1156, 1327, 1417, 1837
Van91I CCANNNNNTGG 1 cut(s) 226
VpaK11BI GGWCC 7 cut(s) 223, 284, 455, 827, 1377, 1607, 1740
VspI ATTAAT 2 cut(s) 45, 621
XapI RAATTY 3 cut(s) 805, 2015, 2249
XceI RCATGY 3 cut(s) 727, 1421, 2214
XhoI CTCGAG 1 cut(s) 991
XmiI GTMKAC 1 cut(s) 1143
XspI CTAG 3 cut(s) 672, 1542, 1973
ZrmI AGTACT 1 cut(s) 97
Zsp2I ATGCAT 1 cut(s) 2216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.