beta-galactosidase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G31740 AT2G04060 AT5G20710 AT5G20710 |
| fragaria_vesca | FvH4_1g09120 FvH4_1g09190 FvH4_1g09190 FvH4_1g26380 |
| malus_domestica | MD02G1096400.v1.1 MD03G1276000.v1.1 MD15G1220900.v1.1 MD15G1221000.v1.1 |
| prunus_persica | Prupe.7G194500_v2.0.a1 |
| pyrus_communis | pycom02g07640 |
| rosa_chinensis | RchiOBHm_Chr2g0095511 RchiOBHm_Chr2g0095591 RchiOBHm_Chr5g0030701 |
| rosa_laevigata | RLG00000016574 RLG00000016582 RLG00000016583 |
| rosa_multiflora | Rmu_co8462209.1_g000001 Rmu_sc0003238.1_g000025 Rmu_sc0003238.1_g000028 Rmu_sc0004719.1_g000009 |
| rosa_roxburghii | Rroxscaffold_2G00146240 |
| rosa_rugosa | Rorug02G0051800 Rorug02G0052600 Rorug05G0120200 |
| rosa_samantha | Rh2AG099800 Rh2AG100400 Rh2BG101100 Rh2BG102200 Rh2CG103300 Rh2CG104600 Rh2DG100700 Rh2DG101500 Rh5AG211800 Rh5BG210700 Rh5CG234400 Rh5CG234500 Rh5DG216100 |
| rosa_wichuraiana | Rw2G007570 Rw2G007630 Rw2G007640 Rw5G019420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 503 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2189 |
| Acc16I | TGCGCA | 1 cut(s) | 1807 |
| Acc36I | ACCTGC | 3 cut(s) | 503, 676, 1563 |
| Acc65I | GGTACC | 1 cut(s) | 1689 |
| AccB1I | GGYRCC | 2 cut(s) | 458, 1689 |
| AccI | GTMKAC | 1 cut(s) | 1518 |
| AccII | CGCG | 1 cut(s) | 1702 |
| AccIII | TCCGGA | 1 cut(s) | 2285 |
| AciI | CCGC | 6 cut(s) | 60, 1700, 2140, 2393, 2480, 2730 |
| AcoI | YGGCCR | 3 cut(s) | 1408, 1558, 1998 |
| AcsI | RAATTY | 2 cut(s) | 496, 571 |
| AcuI | CTGAAG | 2 cut(s) | 1158, 1903 |
| AflII | CTTAAG | 1 cut(s) | 1522 |
| AjnI | CCWGG | 2 cut(s) | 279, 899 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1257, 1289 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1842, 1874 |
| AluBI | AGCT | 8 cut(s) | 607, 997, 1189, 1490, 1802, 1949, 2209, 2725 |
| AluI | AGCT | 8 cut(s) | 607, 997, 1189, 1490, 1802, 1949, 2209, 2725 |
| Alw26I | GTCTC | 2 cut(s) | 1999, 2048 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1000 |
| Aor13HI | TCCGGA | 1 cut(s) | 2285 |
| AoxI | GGCC | 9 cut(s) | 170, 202, 938, 1408, 1558, 1927, 1998, 2413, 2538 |
| ApaI | GGGCCC | 1 cut(s) | 2417 |
| ApeKI | GCWGC | 7 cut(s) | 997, 1415, 2206, 2381, 2384, 2528, 2579 |
| ApoI | RAATTY | 2 cut(s) | 496, 571 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 336, 368 |
| AseI | ATTAAT | 1 cut(s) | 1116 |
| Asp718I | GGTACC | 1 cut(s) | 1689 |
| AspLEI | GCGC | 2 cut(s) | 1808, 1904 |
| AsuC2I | CCSGG | 1 cut(s) | 2305 |
| AsuHPI | GGTGA | 7 cut(s) | 122, 301, 520, 1339, 1391, 1564, 1901 |
| AsuII | TTCGAA | 1 cut(s) | 1743 |
| AvaII | GGWCC | 8 cut(s) | 344, 518, 717, 1056, 1286, 2059, 2215, 2233 |
| BaeGI | GKGCMC | 1 cut(s) | 2417 |
| BaeI | ACNNNNGTAYC | 8 cut(s) | 210, 243, 888, 921, 1311, 1344, 1820, 1853 |
| BalI | TGGCCA | 1 cut(s) | 1410 |
| BanI | GGYRCC | 2 cut(s) | 458, 1689 |
| BanII | GRGCYC | 3 cut(s) | 324, 2417, 2426 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1812, 1844 |
| BbsI | GAAGAC | 1 cut(s) | 2185 |
| BbvI | GCAGC | 7 cut(s) | 984, 1402, 2218, 2368, 2371, 2540, 2566 |
| BccI | CCATC | 9 cut(s) | 101, 104, 191, 314, 1680, 1889, 2050, 2539, 2648 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 530, 564, 1709, 1743 |
| BciT130I | CCWGG | 2 cut(s) | 281, 901 |
| BcnI | CCSGG | 1 cut(s) | 2305 |
| BcoDI | GTCTC | 2 cut(s) | 1999, 2048 |
| BfaI | CTAG | 2 cut(s) | 1419, 1532 |
| BfmI | CTRYAG | 5 cut(s) | 411, 1832, 2517, 2685, 2701 |
| BfoI | RGCGCY | 1 cut(s) | 1905 |
| BfrI | CTTAAG | 1 cut(s) | 1522 |
| BfuAI | ACCTGC | 3 cut(s) | 503, 676, 1563 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 2421, 2537 |
| BisI | GCNGC | 8 cut(s) | 998, 1416, 2207, 2382, 2385, 2394, 2529, 2580 |
| BlsI | GCNGC | 8 cut(s) | 999, 1417, 2208, 2383, 2386, 2395, 2530, 2581 |
| BmcAI | AGTACT | 1 cut(s) | 157 |
| Bme1390I | CCNGG | 3 cut(s) | 281, 901, 2305 |
| Bme18I | GGWCC | 8 cut(s) | 344, 518, 717, 1056, 1286, 2059, 2215, 2233 |
| BmiI | GGNNCC | 6 cut(s) | 460, 912, 1501, 1691, 2216, 2415 |
| BmrFI | CCNGG | 3 cut(s) | 281, 901, 2305 |
| BmrI | ACTGGG | 1 cut(s) | 2274 |
| BmsI | GCATC | 2 cut(s) | 538, 604 |
| BmuI | ACTGGG | 1 cut(s) | 2274 |
| BpiI | GAAGAC | 1 cut(s) | 2185 |
| BpmI | CTGGAG | 1 cut(s) | 2486 |
| Bpu10I | CCTNAGC | 3 cut(s) | 846, 2388, 2476 |
| Bpu14I | TTCGAA | 1 cut(s) | 1743 |
| BpuEI | CTTGAG | 3 cut(s) | 1360, 2374, 2382 |
| BpuMI | CCSGG | 1 cut(s) | 2305 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2696 |
| BsaWI | WCCGGW | 2 cut(s) | 1507, 2285 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1086, 1116, 1842, 1872, 2207, 2237 |
| Bse118I | RCCGGY | 1 cut(s) | 2061 |
| Bse1I | ACTGG | 3 cut(s) | 1411, 1930, 2280 |
| Bse3DI | GCAATG | 1 cut(s) | 2149 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2696 |
| BseAI | TCCGGA | 1 cut(s) | 2285 |
| BseBI | CCWGG | 2 cut(s) | 281, 901 |
| BseGI | GGATG | 7 cut(s) | 306, 565, 1464, 1959, 2274, 2362, 2471 |
| BseJI | GATNNNNATC | 1 cut(s) | 2696 |
| BseMI | GCAATG | 1 cut(s) | 2149 |
| BseMII | CTCAG | 6 cut(s) | 285, 860, 933, 1234, 1314, 2281 |
| BseNI | ACTGG | 3 cut(s) | 1411, 1930, 2280 |
| BseRI | GAGGAG | 1 cut(s) | 1482 |
| BseSI | GKGCMC | 1 cut(s) | 2417 |
| BseXI | GCAGC | 7 cut(s) | 984, 1402, 2218, 2368, 2371, 2540, 2566 |
| BsgI | GTGCAG | 1 cut(s) | 378 |
| Bsh1236I | CGCG | 1 cut(s) | 1702 |
| BshFI | GGCC | 9 cut(s) | 172, 204, 940, 1410, 1560, 1929, 2000, 2415, 2540 |
| BshNI | GGYRCC | 2 cut(s) | 458, 1689 |
| BsiSI | CCGG | 4 cut(s) | 1508, 2062, 2286, 2305 |
| BslFI | GGGAC | 3 cut(s) | 1147, 1404, 2228 |
| BsmAI | GTCTC | 2 cut(s) | 1999, 2048 |
| BsmBI | CGTCTC | 1 cut(s) | 1999 |
| BsmFI | GGGAC | 3 cut(s) | 1147, 1404, 2228 |
| BsmI | GAATGC | 1 cut(s) | 2732 |
| BsnI | GGCC | 9 cut(s) | 172, 204, 940, 1410, 1560, 1929, 2000, 2415, 2540 |
| Bsp119I | TTCGAA | 1 cut(s) | 1743 |
| Bsp120I | GGGCCC | 1 cut(s) | 2413 |
| Bsp1286I | GDGCHC | 3 cut(s) | 324, 2417, 2426 |
| Bsp13I | TCCGGA | 1 cut(s) | 2285 |
| Bsp1407I | TGTACA | 2 cut(s) | 834, 1610 |
| Bsp19I | CCATGG | 2 cut(s) | 484, 2455 |
| BspACI | CCGC | 6 cut(s) | 60, 1700, 2140, 2393, 2480, 2730 |
| BspANI | GGCC | 9 cut(s) | 172, 204, 940, 1410, 1560, 1929, 2000, 2415, 2540 |
| BspCNI | CTCAG | 6 cut(s) | 284, 859, 934, 1233, 1315, 2280 |
| BspEI | TCCGGA | 1 cut(s) | 2285 |
| BspFNI | CGCG | 1 cut(s) | 1702 |
| BspLI | GGNNCC | 6 cut(s) | 460, 912, 1501, 1691, 2216, 2415 |
| BspMAI | CTGCAG | 2 cut(s) | 415, 1836 |
| BspMI | ACCTGC | 3 cut(s) | 503, 676, 1563 |
| BspQI | GCTCTTC | 1 cut(s) | 85 |
| BspT104I | TTCGAA | 1 cut(s) | 1743 |
| BspT107I | GGYRCC | 2 cut(s) | 458, 1689 |
| BspTI | CTTAAG | 1 cut(s) | 1522 |
| BsrDI | GCAATG | 1 cut(s) | 2149 |
| BsrFI | RCCGGY | 1 cut(s) | 2061 |
| BsrGI | TGTACA | 2 cut(s) | 834, 1610 |
| BsrI | ACTGG | 3 cut(s) | 1411, 1930, 2280 |
| BssAI | RCCGGY | 1 cut(s) | 2061 |
| BssT1I | CCWWGG | 6 cut(s) | 149, 484, 1846, 2001, 2417, 2455 |
| Bst2UI | CCWGG | 2 cut(s) | 281, 901 |
| Bst6I | CTCTTC | 4 cut(s) | 85, 1221, 1740, 1849 |
| BstAFI | CTTAAG | 1 cut(s) | 1522 |
| BstAUI | TGTACA | 2 cut(s) | 834, 1610 |
| BstBI | TTCGAA | 1 cut(s) | 1743 |
| BstC8I | GCNNGC | 3 cut(s) | 392, 1804, 1906 |
| BstDSI | CCRYGG | 4 cut(s) | 69, 484, 2226, 2455 |
| BstF5I | GGATG | 7 cut(s) | 306, 565, 1464, 1959, 2274, 2362, 2471 |
| BstFNI | CGCG | 1 cut(s) | 1702 |
| BstH2I | RGCGCY | 1 cut(s) | 1905 |
| BstHHI | GCGC | 2 cut(s) | 1808, 1904 |
| BstMAI | GTCTC | 2 cut(s) | 1999, 2048 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 2006, 2390, 2393, 2421, 2537 |
| BstNI | CCWGG | 2 cut(s) | 281, 901 |
| BstNSI | RCATGY | 2 cut(s) | 394, 2081 |
| BstSCI | CCNGG | 3 cut(s) | 279, 899, 2303 |
| BstSFI | CTRYAG | 5 cut(s) | 411, 1832, 2517, 2685, 2701 |
| BstSLI | GKGCMC | 1 cut(s) | 2417 |
| BstUI | CGCG | 1 cut(s) | 1702 |
| BstV1I | GCAGC | 7 cut(s) | 984, 1402, 2218, 2368, 2371, 2540, 2566 |
| BstV2I | GAAGAC | 1 cut(s) | 2185 |
| BstX2I | RGATCY | 3 cut(s) | 397, 418, 1913 |
| BstYI | RGATCY | 3 cut(s) | 397, 418, 1913 |
| BsuRI | GGCC | 9 cut(s) | 172, 204, 940, 1410, 1560, 1929, 2000, 2415, 2540 |
| BtgI | CCRYGG | 4 cut(s) | 69, 484, 2226, 2455 |
| BtsCI | GGATG | 7 cut(s) | 306, 565, 1464, 1959, 2274, 2362, 2471 |
| BtsI | GCAGTG | 2 cut(s) | 840, 1590 |
| BtsIMutI | CAGTG | 7 cut(s) | 747, 840, 1227, 1228, 1590, 1937, 2275 |
| BveI | ACCTGC | 3 cut(s) | 503, 676, 1563 |
| Cac8I | GCNNGC | 3 cut(s) | 392, 1804, 1906 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1000 |
| CfoI | GCGC | 2 cut(s) | 1808, 1904 |
| Cfr10I | RCCGGY | 1 cut(s) | 2061 |
| CseI | GACGC | 2 cut(s) | 242, 2631 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 569, 604 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2189 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2189 |
| EaeI | YGGCCR | 3 cut(s) | 1408, 1558, 1998 |
| Eam1104I | CTCTTC | 4 cut(s) | 85, 1221, 1740, 1849 |
| EarI | CTCTTC | 4 cut(s) | 85, 1221, 1740, 1849 |
| EciI | GGCGGA | 1 cut(s) | 49 |
| Eco130I | CCWWGG | 6 cut(s) | 149, 484, 1846, 2001, 2417, 2455 |
| Eco147I | AGGCCT | 2 cut(s) | 204, 940 |
| Eco24I | GRGCYC | 3 cut(s) | 324, 2417, 2426 |
| Eco47I | GGWCC | 8 cut(s) | 344, 518, 717, 1056, 1286, 2059, 2215, 2233 |
| Eco57I | CTGAAG | 2 cut(s) | 1158, 1903 |
| EcoRII | CCWGG | 2 cut(s) | 279, 899 |
| EcoT14I | CCWWGG | 6 cut(s) | 149, 484, 1846, 2001, 2417, 2455 |
| EcoT38I | GRGCYC | 3 cut(s) | 324, 2417, 2426 |
| ErhI | CCWWGG | 6 cut(s) | 149, 484, 1846, 2001, 2417, 2455 |
| Esp3I | CGTCTC | 1 cut(s) | 1999 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1466, 1498, 1479, 1511 |
| FaqI | GGGAC | 3 cut(s) | 1147, 1404, 2228 |
| FauI | CCCGC | 1 cut(s) | 2737 |
| FauNDI | CATATG | 1 cut(s) | 349 |
| FblI | GTMKAC | 1 cut(s) | 1518 |
| Fnu4HI | GCNGC | 8 cut(s) | 998, 1416, 2207, 2382, 2385, 2394, 2529, 2580 |
| FokI | GGATG | 7 cut(s) | 293, 572, 1471, 1946, 2261, 2349, 2458 |
| FriOI | GRGCYC | 3 cut(s) | 324, 2417, 2426 |
| Fsp4HI | GCNGC | 8 cut(s) | 998, 1416, 2207, 2382, 2385, 2394, 2529, 2580 |
| FspBI | CTAG | 2 cut(s) | 1419, 1532 |
| FspI | TGCGCA | 1 cut(s) | 1807 |
| GlaI | GCGC | 2 cut(s) | 1807, 1903 |
| GluI | GCNGC | 8 cut(s) | 998, 1416, 2207, 2382, 2385, 2394, 2529, 2580 |
| GsuI | CTGGAG | 1 cut(s) | 2486 |
| HaeII | RGCGCY | 1 cut(s) | 1905 |
| HaeIII | GGCC | 9 cut(s) | 172, 204, 940, 1410, 1560, 1929, 2000, 2415, 2540 |
| HapII | CCGG | 4 cut(s) | 1508, 2062, 2286, 2305 |
| HgaI | GACGC | 2 cut(s) | 242, 2631 |
| HhaI | GCGC | 2 cut(s) | 1808, 1904 |
| Hin6I | GCGC | 2 cut(s) | 1806, 1902 |
| HinP1I | GCGC | 2 cut(s) | 1806, 1902 |
| HincII | GTYRAC | 2 cut(s) | 50, 1519 |
| HindII | GTYRAC | 2 cut(s) | 50, 1519 |
| HindIII | AAGCTT | 1 cut(s) | 1800 |
| HpaII | CCGG | 4 cut(s) | 1508, 2062, 2286, 2305 |
| HphI | GGTGA | 7 cut(s) | 122, 301, 520, 1339, 1391, 1564, 1901 |
| Hpy166II | GTNNAC | 8 cut(s) | 50, 697, 835, 1356, 1382, 1519, 1816, 2236 |
| Hpy188I | TCNGA | 9 cut(s) | 303, 339, 642, 1944, 1986, 2055, 2315, 2626, 2752 |
| Hpy8I | GTNNAC | 8 cut(s) | 50, 697, 835, 1356, 1382, 1519, 1816, 2236 |
| Hpy99I | CGWCG | 3 cut(s) | 258, 2174, 2647 |
| HpyAV | CCTTC | 9 cut(s) | 15, 472, 628, 871, 1814, 1927, 2043, 2120, 2516 |
| HpyCH4IV | ACGT | 3 cut(s) | 225, 1169, 2029 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 2006, 2390, 2393, 2421, 2537 |
| HpySE526I | ACGT | 3 cut(s) | 225, 1169, 2029 |
| HspAI | GCGC | 2 cut(s) | 1806, 1902 |
| Kpn2I | TCCGGA | 1 cut(s) | 2285 |
| KpnI | GGTACC | 1 cut(s) | 1693 |
| LguI | GCTCTTC | 1 cut(s) | 85 |
| LmnI | GCTCC | 1 cut(s) | 1495 |
| Lsp1109I | GCAGC | 7 cut(s) | 984, 1402, 2218, 2368, 2371, 2540, 2566 |
| LweI | GCATC | 2 cut(s) | 538, 604 |
| MaeI | CTAG | 2 cut(s) | 1419, 1532 |
| MaeII | ACGT | 3 cut(s) | 225, 1169, 2029 |
| MfeI | CAATTG | 3 cut(s) | 102, 1051, 1182 |
| MflI | RGATCY | 3 cut(s) | 397, 418, 1913 |
| MhlI | GDGCHC | 3 cut(s) | 324, 2417, 2426 |
| MlsI | TGGCCA | 1 cut(s) | 1410 |
| MluNI | TGGCCA | 1 cut(s) | 1410 |
| MlyI | GAGTC | 1 cut(s) | 2477 |
| MmeI | TCCRAC | 3 cut(s) | 1348, 1472, 1967 |
| Mox20I | TGGCCA | 1 cut(s) | 1410 |
| MroI | TCCGGA | 1 cut(s) | 2285 |
| MscI | TGGCCA | 1 cut(s) | 1410 |
| MseI | TTAA | 9 cut(s) | 207, 600, 852, 1116, 1523, 1767, 1773, 2597, 2768 |
| MslI | CAYNNNNRTG | 1 cut(s) | 828 |
| Msp20I | TGGCCA | 1 cut(s) | 1410 |
| MspA1I | CMGCKG | 1 cut(s) | 997 |
| MspCI | CTTAAG | 1 cut(s) | 1522 |
| MspI | CCGG | 4 cut(s) | 1508, 2062, 2286, 2305 |
| MspR9I | CCNGG | 3 cut(s) | 281, 901, 2305 |
| MunI | CAATTG | 3 cut(s) | 102, 1051, 1182 |
| Mva1269I | GAATGC | 1 cut(s) | 2732 |
| MvaI | CCWGG | 2 cut(s) | 281, 901 |
| MvnI | CGCG | 1 cut(s) | 1702 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 2006, 2390, 2393, 2421, 2537 |
| NciI | CCSGG | 1 cut(s) | 2305 |
| NcoI | CCATGG | 2 cut(s) | 484, 2455 |
| NdeI | CATATG | 1 cut(s) | 349 |
| NlaIV | GGNNCC | 6 cut(s) | 460, 912, 1501, 1691, 2216, 2415 |
| NmeAIII | GCCGAG | 2 cut(s) | 1976, 2035 |
| NmuCI | GTSAC | 6 cut(s) | 802, 1225, 1327, 2105, 2270, 2711 |
| NsbI | TGCGCA | 1 cut(s) | 1807 |
| NspI | RCATGY | 2 cut(s) | 394, 2081 |
| NspV | TTCGAA | 1 cut(s) | 1743 |
| PaeI | GCATGC | 1 cut(s) | 394 |
| PaqCI | CACCTGC | 1 cut(s) | 503 |
| PceI | AGGCCT | 2 cut(s) | 204, 940 |
| PciSI | GCTCTTC | 1 cut(s) | 85 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2178 |
| PctI | GAATGC | 1 cut(s) | 2732 |
| PkrI | GCNGC | 8 cut(s) | 999, 1417, 2208, 2383, 2386, 2395, 2530, 2581 |
| PleI | GAGTC | 1 cut(s) | 2476 |
| PpsI | GAGTC | 1 cut(s) | 2476 |
| PshBI | ATTAAT | 1 cut(s) | 1116 |
| Psp6I | CCWGG | 2 cut(s) | 279, 899 |
| PspGI | CCWGG | 2 cut(s) | 279, 899 |
| PspN4I | GGNNCC | 6 cut(s) | 460, 912, 1501, 1691, 2216, 2415 |
| PspOMI | GGGCCC | 1 cut(s) | 2413 |
| PstI | CTGCAG | 2 cut(s) | 415, 1836 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1000 |
| PsuI | RGATCY | 3 cut(s) | 397, 418, 1913 |
| PvuII | CAGCTG | 1 cut(s) | 997 |
| RseI | CAYNNNNRTG | 1 cut(s) | 828 |
| SalI | GTCGAC | 1 cut(s) | 1517 |
| SapI | GCTCTTC | 1 cut(s) | 85 |
| SaqAI | TTAA | 9 cut(s) | 207, 600, 852, 1116, 1523, 1767, 1773, 2597, 2768 |
| SatI | GCNGC | 8 cut(s) | 998, 1416, 2207, 2382, 2385, 2394, 2529, 2580 |
| ScaI | AGTACT | 1 cut(s) | 157 |
| SchI | GAGTC | 1 cut(s) | 2477 |
| ScrFI | CCNGG | 3 cut(s) | 281, 901, 2305 |
| SduI | GDGCHC | 3 cut(s) | 324, 2417, 2426 |
| SfaNI | GCATC | 2 cut(s) | 538, 604 |
| SfcI | CTRYAG | 5 cut(s) | 411, 1832, 2517, 2685, 2701 |
| SfuI | TTCGAA | 1 cut(s) | 1743 |
| SinI | GGWCC | 8 cut(s) | 344, 518, 717, 1056, 1286, 2059, 2215, 2233 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 828 |
| SmlI | CTYRAG | 4 cut(s) | 1339, 1522, 2353, 2397 |
| SmoI | CTYRAG | 4 cut(s) | 1339, 1522, 2353, 2397 |
| SphI | GCATGC | 1 cut(s) | 394 |
| SseBI | AGGCCT | 2 cut(s) | 204, 940 |
| SsiI | CCGC | 6 cut(s) | 60, 1700, 2140, 2393, 2480, 2730 |
| SspMI | CTAG | 2 cut(s) | 1419, 1532 |
| StuI | AGGCCT | 2 cut(s) | 204, 940 |
| StyD4I | CCNGG | 3 cut(s) | 279, 899, 2303 |
| StyI | CCWWGG | 6 cut(s) | 149, 484, 1846, 2001, 2417, 2455 |
| TaiI | ACGT | 3 cut(s) | 228, 1172, 2032 |
| TaqI | TCGA | 5 cut(s) | 78, 1518, 1743, 2172, 2645 |
| TaqII | GACCGA | 2 cut(s) | 495, 705 |
| TatI | WGTACW | 4 cut(s) | 155, 834, 1308, 1610 |
| TauI | GCSGC | 1 cut(s) | 2396 |
| Tru1I | TTAA | 9 cut(s) | 207, 600, 852, 1116, 1523, 1767, 1773, 2597, 2768 |
| Tru9I | TTAA | 9 cut(s) | 207, 600, 852, 1116, 1523, 1767, 1773, 2597, 2768 |
| TscAI | CASTG | 7 cut(s) | 754, 847, 1228, 1234, 1597, 1937, 2275 |
| TseFI | GTSAC | 6 cut(s) | 802, 1225, 1327, 2105, 2270, 2711 |
| TseI | GCWGC | 7 cut(s) | 997, 1415, 2206, 2381, 2384, 2528, 2579 |
| Tsp45I | GTSAC | 6 cut(s) | 802, 1225, 1327, 2105, 2270, 2711 |
| TspGWI | ACGGA | 3 cut(s) | 421, 687, 2215 |
| TspRI | CASTG | 7 cut(s) | 754, 847, 1228, 1234, 1597, 1937, 2275 |
| Vha464I | CTTAAG | 1 cut(s) | 1522 |
| VpaK11BI | GGWCC | 8 cut(s) | 344, 518, 717, 1056, 1286, 2059, 2215, 2233 |
| VspI | ATTAAT | 1 cut(s) | 1116 |
| XapI | RAATTY | 2 cut(s) | 496, 571 |
| XceI | RCATGY | 2 cut(s) | 394, 2081 |
| XmiI | GTMKAC | 1 cut(s) | 1518 |
| XspI | CTAG | 2 cut(s) | 1419, 1532 |
| ZrmI | AGTACT | 1 cut(s) | 157 |