Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001959

Physical Location & Seq

Genomic Coordinates Forward (+)

8430242 .. 8434258

Gene Structure 4017 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ47049

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2433 bp

ATGGCACTCCCCAAGAGTTTTGCGTTTTCTCTTTGTTTCTGTCTTTCTGTGATCCTCTGCAGCCTCGTTGCTAATGCTACTGACGTTTCTTATGATGGCAGAGCCATCACCATTGATGGCAAACGAAGGATTTTGAATTCTGGTTCCATACATTATCCTCGAAGTACACCACAAATGTGGCCAGACTTGATTAGGAAGTCAAAGGAAGGTGGACTCGATGCAATTGAGACTTATGTCTTCTGGAATGCGCATGAACCAGTTCGTCGTGAATACGATTTTACTGGTAATCTTGACCTGGTTAGGTTTATCAAAACGATTCAAGATGAAGGACTTTATGCTGTTCTTCGGATTGGTCCATATGTTTGTGCTGAATGGAATTATGGAGGACTTCCTGTTTGGCTCCATAACCTGCCAAACTGTCATATTCGAACAGCAAACGATGTTTTCATGAAACTATTTGCATCTCAAGGAGGCCCTATCATTATTGCTCAGATTGAAAATGAATATGGCAATGTGGAATCATACTATGGAGATGCTGGAAAAGCATACATTAACTGGTCTGCAAACTTTGCTGAATCACTAAACATCGGAGTTCCATGGATTATGTGTCAACAAAATGATGCTCCCGCATCAATGATAAACACATGTAATGGCTGGTATTGTGACACATTCAAGCCAAGTAACCCCAACACTCCTAAGATGTGGACTGAAAATTGGACTGGCTGGTTCAAGAGCTGGGGTGGTTTAGACCCACTCAGGACTGCTGAGGACGTTGCATTTGCAGTAGCAAGGTTTTTCCAATATGGAGGCACATTTCAAAACTATTACATGTATCATGGTGGAACAAACTTTGGTAGAACAGCAGCTTCATACATTACCACCTCGTATGATTATGATGCCCCTCTTGATGAGTATGGCCATCTGAGTCAACCAAAATGGGGGCATTTGAAAGAACTTCATGAGGTTTTGAAATCCATGGAATATACTCTCACCTATGGCAATATTACCACCACAGAATTGGGTAACTCTGTCTCAACCACTGTGTTTGCGACAAATGAGTCAAGTAGCTGCATTTTTGGCAATGCAAATAGCAGTTCAGATGCTACAATCACTTTCCAAGGAAACACATACACCATTCCTGCTTGGTCTGTTAGTATTCTTCCTGATTGCAAAAAAGAAGCATACAACACTGCTAAGGTAAACACCCAAACTACAGTGAAAGTAAAAAGTGTCAACAAGGCTGAGGATGAACCTGAATCCCTTCATTGGTCATGGAGGCCCGAGAAGACGGATGACACCCAGCTTCTTGGAAAAGGTGAAGTTGTGGCAAGTCGTCTTATGGAACAAAAAGAGGCTGCAAATGATGCTAGTGATTATCTTTGGTACATGACAAGTGTTCAACTCAGTAAGGATGATCCAATTTTGAGTGGGAACATGACATTGAGGATAAATGAAACTGGTTACATTCTTCATGCTTATGTTAATGGAGAACATGTTGGTTCTCAATGGGCTGCTTATAACGTCTTCAACTACGTTTTCGAGAAACCTATCAAGTTGGTTCCCGGAGTGAACACAATTTCATTGCTCAGTGCTACTGTTGGATTTCCCAATTATGGAGGTGGATTTGAGGACATCAAAACTGGAGTAGCTGGTCCTGTTCAATTGGTTGGACAAAGTGGAGATGAAACTGTGATCAAGGATTTGTCACAACACAAATGGTCATACAAGGTTGGACTCCATGGCTTGAAAGACGAGCTCTTTAGCTCTGCTTCTCGTTTTGCAAATAAATGGTCAGTTGAAGGTTTACCAGTAAACAGAACGATGACATGGTATAAGACAACTTTCAAAGCTCCCCTAGGAACTGAACCAGTCGTCGTGGACTTACACGGGTTGGGTAAGGGACATGCTTGGGTGAACGGGCATAGCATTGGGCGATATTGGCCAAGCTACTTGGCTCCAGAGGATGGTTGTAGTGTTGAAGCTTGTGACTACCGTGGTGCATACGACAATAACAAGTGTGTCTTCAACTGTGGCAAACCTACTCAAAGATGGTATCATGTTCCGCGATCCTTTTTGCAAGATGATGAGAACACATTGGTCTTGTTTGAGGAATTTGGTGGCAACCCATCTTATGTGAATTTCCAGACAATCAGAGTTGGAACTATTTGTGCAAATGCATATGAGAATCATACATTGGAATTGGCATGCCAAGGTCGCCCCATTTCAGCAATCAAATTTGCTAGCTTTGGAAAACCTGAAGGGACTTGTGGATCATTTAAGAATGGCACCTGTGATGGCACAACTGCTTTGTCCATCCTTCAAAAGGAATGTGTTGGAAAAGAGTCGTGCTCAATTGATGTATCAGAAAAGAAGTTCGGTTCCACAAATTGTGGCGATATTGTGAAGAGGCTGGCCGTGGAAGCAGTTTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0015925 GO:0016787 GO:0016798 GO:0030312 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BetaGal_dom4_5 Gal_Lectin Glyco_hydro_35

Protein Analysis

810

Amino Acids

90.0

Weight (kDa)

5.64

Isoelectric Point (pI)

33.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_35	PF01301	36 - 321	1.6e-106	Glycosyl hydrolases family 35
GHD	PF17834	346 - 400	1.5e-21	Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd	PF21467	608 - 697	5e-25	Beta-galactosidase, galactose-binding domain
SUEL_Lectin	PF02140	735 - 810	3.8e-18	D-galactoside/L-rhamnose binding SUEL lectin domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001959)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31740 AT2G04060 AT5G20710 AT5G20710
fragaria_vesca	FvH4_1g09120 FvH4_1g09190 FvH4_1g09190 FvH4_1g26380
malus_domestica	MD02G1096400.v1.1 MD03G1276000.v1.1 MD15G1220900.v1.1 MD15G1221000.v1.1
prunus_persica	Prupe.7G194500_v2.0.a1
pyrus_communis	pycom02g07640
rosa_chinensis	RchiOBHm_Chr2g0095511 RchiOBHm_Chr2g0095591 RchiOBHm_Chr5g0030701
rosa_laevigata	RLG00000016574 RLG00000016582 RLG00000016583
rosa_multiflora	Rmu_co8462209.1_g000001 Rmu_sc0003238.1_g000025 Rmu_sc0003238.1_g000028 Rmu_sc0004719.1_g000009
rosa_roxburghii	Rroxscaffold_2G00146240
rosa_rugosa	Rorug02G0051800 Rorug02G0052600 Rorug05G0120200
rosa_samantha	Rh2AG099800 Rh2AG100400 Rh2BG101100 Rh2BG102200 Rh2CG103300 Rh2CG104600 Rh2DG100700 Rh2DG101500 Rh5AG211800 Rh5BG210700 Rh5CG234400 Rh5CG234500 Rh5DG216100
rosa_wichuraiana	Rw2G007570 Rw2G007630 Rw2G007640 Rw5G019420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1518
AasI	GACNNNNNNGTC	1 cut(s)	1057
Acc16I	TGCGCA	1 cut(s)	249
Acc36I	ACCTGC	1 cut(s)	417
AccB1I	GGYRCC	1 cut(s)	2285
AccB7I	CCANNNNNTGG	1 cut(s)	1964
AccII	CGCG	1 cut(s)	2065
AciI	CCGC	2 cut(s)	627, 2063
AclWI	GGATC	4 cut(s)	46, 1409, 2061, 2278
AcoI	YGGCCR	4 cut(s)	179, 916, 1940, 2412
AcsI	RAATTY	4 cut(s)	136, 2111, 2137, 2234
AcuI	CTGAAG	1 cut(s)	2277
AfaI	GTAC	2 cut(s)	166, 1385
AfiI	CCNNNNNNNGG	5 cut(s)	938, 1266, 1613, 1964, 2323
AflIII	ACRYGT	3 cut(s)	644, 828, 1492
AjnI	CCWGG	1 cut(s)	294
AjuI	GAANNNNNNNTTGG	2 cut(s)	2177, 2209
AleI	CACNNNNGTG	1 cut(s)	175
Alw21I	GWGCWC	2 cut(s)	1758, 2351
Alw26I	GTCTC	2 cut(s)	221, 1036
AlwI	GGATC	4 cut(s)	46, 1409, 2061, 2278
Ama87I	CYCGRG	1 cut(s)	1280
AoxI	GGCC	6 cut(s)	179, 472, 916, 1277, 1940, 2412
ApeKI	GCWGC	5 cut(s)	60, 863, 1068, 1355, 1511
ApoI	RAATTY	4 cut(s)	136, 2111, 2137, 2234
ArsI	GACNNNNNNTTYG	6 cut(s)	378, 410, 761, 793, 1775, 1807
Asp700I	GAANNNNTTC	2 cut(s)	258, 1260
AspA2I	CCTAGG	1 cut(s)	1855
AspLEI	GCGC	1 cut(s)	250
AspS9I	GGNCC	4 cut(s)	353, 473, 1278, 1652
AsuC2I	CCSGG	1 cut(s)	1563
AsuHPI	GGTGA	4 cut(s)	100, 982, 1328, 1924
AsuII	TTCGAA	1 cut(s)	427
AsuNHI	GCTAGC	1 cut(s)	2240
AvaI	CYCGRG	1 cut(s)	1280
AvaII	GGWCC	2 cut(s)	353, 1652
AvrII	CCTAGG	1 cut(s)	1855
BalI	TGGCCA	3 cut(s)	181, 918, 1942
BanI	GGYRCC	1 cut(s)	2285
BanII	GRGCYC	1 cut(s)	1758
BbsI	GAAGAC	4 cut(s)	229, 1292, 1516, 2014
Bbv12I	GWGCWC	2 cut(s)	1758, 2351
BbvCI	CCTCAGC	2 cut(s)	765, 1242
BbvI	GCAGC	5 cut(s)	72, 875, 1055, 1342, 1498
BccI	CCATC	9 cut(s)	89, 110, 113, 927, 1958, 2043, 2134, 2288, 2321
BceAI	ACGGC	1 cut(s)	2399
BciT130I	CCWGG	1 cut(s)	296
BclI	TGATCA	1 cut(s)	1692
BcnI	CCSGG	1 cut(s)	1563
BcoDI	GTCTC	2 cut(s)	221, 1036
BfaI	CTAG	3 cut(s)	1368, 1856, 2241
BfmI	CTRYAG	2 cut(s)	58, 1212
BfuAI	ACCTGC	1 cut(s)	417
BisI	GCNGC	5 cut(s)	61, 864, 1069, 1356, 1512
BlnI	CCTAGG	1 cut(s)	1855
BlsI	GCNGC	5 cut(s)	62, 865, 1070, 1357, 1513
Bme1390I	CCNGG	2 cut(s)	296, 1563
Bme18I	GGWCC	2 cut(s)	353, 1652
BmeT110I	CYCGRG	1 cut(s)	1280
BmgT120I	GGNCC	4 cut(s)	353, 473, 1278, 1652
BmiI	GGNNCC	6 cut(s)	145, 401, 1560, 1956, 2287, 2380
BmrFI	CCNGG	2 cut(s)	296, 1563
BmsI	GCATC	8 cut(s)	208, 470, 523, 610, 638, 886, 1090, 1354
BmtI	GCTAGC	1 cut(s)	2244
BoxI	GACNNNNGTC	1 cut(s)	233
BpiI	GAAGAC	4 cut(s)	229, 1292, 1516, 2014
BplI	GAGNNNNNCTC	2 cut(s)	2333, 2365
BpmI	CTGGAG	2 cut(s)	1662, 1941
Bpu10I	CCTNAGC	3 cut(s)	765, 1194, 1242
Bpu14I	TTCGAA	1 cut(s)	427
BpuEI	CTTGAG	1 cut(s)	450
BpuMI	CCSGG	1 cut(s)	1563
BsaJI	CCNNGG	8 cut(s)	596, 975, 1117, 1738, 1855, 1993, 2209, 2415
BsaXI	ACNNNNNCTCC	2 cut(s)	1479, 1509
Bsc4I	CCNNNNNNNGG	5 cut(s)	938, 1266, 1613, 1964, 2323
Bse1I	ACTGG	8 cut(s)	257, 286, 560, 724, 1462, 1645, 1808, 1868
Bse3DI	GCAATG	3 cut(s)	517, 1087, 1580
BseBI	CCWGG	1 cut(s)	296
BseDI	CCNNGG	8 cut(s)	596, 975, 1117, 1738, 1855, 1993, 2209, 2415
BseGI	GGATG	5 cut(s)	1252, 1297, 1417, 1969, 2313
BseLI	CCNNNNNNNGG	5 cut(s)	938, 1266, 1613, 1964, 2323
BseMI	GCAATG	3 cut(s)	517, 1087, 1580
BseMII	CTCAG	7 cut(s)	503, 756, 769, 914, 1233, 1417, 1600
BseNI	ACTGG	8 cut(s)	257, 286, 560, 724, 1462, 1645, 1808, 1868
BseXI	GCAGC	5 cut(s)	72, 875, 1055, 1342, 1498
BseYI	CCCAGC	2 cut(s)	735, 1299
Bsh1236I	CGCG	1 cut(s)	2065
BshFI	GGCC	6 cut(s)	181, 474, 918, 1279, 1942, 2414
BshNI	GGYRCC	1 cut(s)	2285
BsiHKAI	GWGCWC	2 cut(s)	1758, 2351
BsiHKCI	CYCGRG	1 cut(s)	1280
BsiSI	CCGG	1 cut(s)	1563
BslFI	GGGAC	2 cut(s)	1914, 2275
BslI	CCNNNNNNNGG	5 cut(s)	938, 1266, 1613, 1964, 2323
BsmAI	GTCTC	2 cut(s)	221, 1036
BsmFI	GGGAC	2 cut(s)	1914, 2275
BsmI	GAATGC	1 cut(s)	250
BsnI	GGCC	6 cut(s)	181, 474, 918, 1279, 1942, 2414
BsoBI	CYCGRG	1 cut(s)	1280
Bsp119I	TTCGAA	1 cut(s)	427
Bsp1286I	GDGCHC	2 cut(s)	1758, 2351
Bsp143I	GATC	5 cut(s)	51, 1414, 1692, 2066, 2270
Bsp19I	CCATGG	3 cut(s)	596, 975, 1738
BspACI	CCGC	2 cut(s)	627, 2063
BspANI	GGCC	6 cut(s)	181, 474, 918, 1279, 1942, 2414
BspCNI	CTCAG	7 cut(s)	502, 757, 768, 915, 1234, 1416, 1599
BspFNI	CGCG	1 cut(s)	2065
BspHI	TCATGA	2 cut(s)	447, 958
BspLI	GGNNCC	6 cut(s)	145, 401, 1560, 1956, 2287, 2380
BspMAI	CTGCAG	1 cut(s)	62
BspMI	ACCTGC	1 cut(s)	417
BspOI	GCTAGC	1 cut(s)	2244
BspPI	GGATC	4 cut(s)	46, 1409, 2061, 2278
BspT104I	TTCGAA	1 cut(s)	427
BspT107I	GGYRCC	1 cut(s)	2285
BsrDI	GCAATG	3 cut(s)	517, 1087, 1580
BsrI	ACTGG	8 cut(s)	257, 286, 560, 724, 1462, 1645, 1808, 1868
BssECI	CCNNGG	8 cut(s)	596, 975, 1117, 1738, 1855, 1993, 2209, 2415
BssMI	GATC	5 cut(s)	51, 1414, 1692, 2066, 2270
BssT1I	CCWWGG	6 cut(s)	596, 975, 1117, 1738, 1855, 2209
Bst2UI	CCWGG	1 cut(s)	296
Bst4CI	ACNGT	7 cut(s)	419, 1042, 1216, 1597, 1690, 1994, 2030
Bst6I	CTCTTC	1 cut(s)	2399
BstAPI	GCANNNNNTGC	2 cut(s)	569, 1364
BstBI	TTCGAA	1 cut(s)	427
BstC8I	GCNNGC	3 cut(s)	2206, 2242, 2412
BstDEI	CTNAG	9 cut(s)	489, 696, 755, 765, 923, 1194, 1242, 1403, 1586
BstDSI	CCRYGG	5 cut(s)	596, 975, 1738, 1993, 2415
BstENI	CCTNNNNNAGG	1 cut(s)	2321
BstF5I	GGATG	5 cut(s)	1252, 1297, 1417, 1969, 2313
BstFNI	CGCG	1 cut(s)	2065
BstHHI	GCGC	1 cut(s)	250
BstKTI	GATC	5 cut(s)	54, 1417, 1695, 2069, 2273
BstMAI	GTCTC	2 cut(s)	221, 1036
BstMBI	GATC	5 cut(s)	51, 1414, 1692, 2066, 2270
BstMWI	GCNNNNNNNGC	7 cut(s)	542, 569, 1077, 1364, 1939, 2214, 2420
BstNI	CCWGG	1 cut(s)	296
BstNSI	RCATGY	5 cut(s)	648, 832, 1496, 1907, 2208
BstPAI	GACNNNNGTC	1 cut(s)	233
BstSCI	CCNGG	2 cut(s)	294, 1561
BstSFI	CTRYAG	2 cut(s)	58, 1212
BstUI	CGCG	1 cut(s)	2065
BstV1I	GCAGC	5 cut(s)	72, 875, 1055, 1342, 1498
BstV2I	GAAGAC	4 cut(s)	229, 1292, 1516, 2014
BstXI	CCANNNNNNTGG	3 cut(s)	177, 1018, 1307
BsuRI	GGCC	6 cut(s)	181, 474, 918, 1279, 1942, 2414
BtgI	CCRYGG	5 cut(s)	596, 975, 1738, 1993, 2415
BtsCI	GGATG	5 cut(s)	1252, 1297, 1417, 1969, 2313
BtsI	GCAGTG	1 cut(s)	1188
BtsIMutI	CAGTG	4 cut(s)	1038, 1188, 1221, 1594
BveI	ACCTGC	1 cut(s)	417
Cac8I	GCNNGC	3 cut(s)	2206, 2242, 2412
CciI	TCATGA	2 cut(s)	447, 958
CfoI	GCGC	1 cut(s)	250
Cfr13I	GGNCC	4 cut(s)	353, 473, 1278, 1652
CsiI	ACCWGGT	1 cut(s)	294
Csp6I	GTAC	2 cut(s)	165, 1384
CspCI	CAANNNNNGTGG	2 cut(s)	1027, 1062
CviQI	GTAC	2 cut(s)	165, 1384
DdeI	CTNAG	9 cut(s)	489, 696, 755, 765, 923, 1194, 1242, 1403, 1586
DpnI	GATC	5 cut(s)	53, 1416, 1694, 2068, 2272
DpnII	GATC	5 cut(s)	51, 1414, 1692, 2066, 2270
DrdI	GACNNNNNNGTC	1 cut(s)	1057
DseDI	GACNNNNNNGTC	1 cut(s)	1057
EaeI	YGGCCR	4 cut(s)	179, 916, 1940, 2412
Eam1104I	CTCTTC	1 cut(s)	2399
EarI	CTCTTC	1 cut(s)	2399
Ecl136II	GAGCTC	1 cut(s)	1756
Eco130I	CCWWGG	6 cut(s)	596, 975, 1117, 1738, 1855, 2209
Eco24I	GRGCYC	1 cut(s)	1758
Eco47I	GGWCC	2 cut(s)	353, 1652
Eco53kI	GAGCTC	1 cut(s)	1756
Eco57I	CTGAAG	1 cut(s)	2277
Eco88I	CYCGRG	1 cut(s)	1280
EcoICRI	GAGCTC	1 cut(s)	1756
EcoNI	CCTNNNNNAGG	1 cut(s)	2321
EcoO109I	RGGNCCY	1 cut(s)	473
EcoRI	GAATTC	1 cut(s)	136
EcoRII	CCWGG	1 cut(s)	294
EcoT14I	CCWWGG	6 cut(s)	596, 975, 1117, 1738, 1855, 2209
EcoT22I	ATGCAT	1 cut(s)	2179
EcoT38I	GRGCYC	1 cut(s)	1758
ErhI	CCWWGG	6 cut(s)	596, 975, 1117, 1738, 1855, 2209
FalI	AAGNNNNNCTT	2 cut(s)	2006, 2038
FaqI	GGGAC	2 cut(s)	1914, 2275
FauI	CCCGC	1 cut(s)	634
FauNDI	CATATG	2 cut(s)	358, 2179
FbaI	TGATCA	1 cut(s)	1692
Fnu4HI	GCNGC	5 cut(s)	61, 864, 1069, 1356, 1512
FokI	GGATG	5 cut(s)	1259, 1304, 1424, 1976, 2300
FriOI	GRGCYC	1 cut(s)	1758
Fsp4HI	GCNGC	5 cut(s)	61, 864, 1069, 1356, 1512
FspAI	RTGCGCAY	1 cut(s)	249
FspBI	CTAG	3 cut(s)	1368, 1856, 2241
FspI	TGCGCA	1 cut(s)	249
GlaI	GCGC	1 cut(s)	249
GluI	GCNGC	5 cut(s)	61, 864, 1069, 1356, 1512
GsaI	CCCAGC	2 cut(s)	739, 1303
GsuI	CTGGAG	2 cut(s)	1662, 1941
HaeIII	GGCC	6 cut(s)	181, 474, 918, 1279, 1942, 2414
HapII	CCGG	1 cut(s)	1563
HhaI	GCGC	1 cut(s)	250
Hin6I	GCGC	1 cut(s)	248
HinP1I	GCGC	1 cut(s)	248
HincII	GTYRAC	3 cut(s)	611, 929, 1234
HindII	GTYRAC	3 cut(s)	611, 929, 1234
HindIII	AAGCTT	1 cut(s)	1980
HpaII	CCGG	1 cut(s)	1563
HphI	GGTGA	4 cut(s)	100, 982, 1328, 1924
Hpy188I	TCNGA	7 cut(s)	348, 492, 590, 924, 1099, 2153, 2365
Hpy99I	CGWCG	2 cut(s)	267, 1877
HpyAV	CCTTC	7 cut(s)	120, 200, 320, 1271, 1793, 2252, 2327
HpyCH4III	ACNGT	7 cut(s)	419, 1042, 1216, 1597, 1690, 1994, 2030
HpyCH4IV	ACGT	4 cut(s)	84, 771, 1521, 1533
HpyF10VI	GCNNNNNNNGC	7 cut(s)	542, 569, 1077, 1364, 1939, 2214, 2420
HpyF3I	CTNAG	9 cut(s)	489, 696, 755, 765, 923, 1194, 1242, 1403, 1586
HpySE526I	ACGT	4 cut(s)	84, 771, 1521, 1533
HspAI	GCGC	1 cut(s)	248
Ksp22I	TGATCA	1 cut(s)	1692
Kzo9I	GATC	5 cut(s)	51, 1414, 1692, 2066, 2270
LmnI	GCTCC	4 cut(s)	405, 628, 1855, 1960
Lsp1109I	GCAGC	5 cut(s)	72, 875, 1055, 1342, 1498
LweI	GCATC	8 cut(s)	208, 470, 523, 610, 638, 886, 1090, 1354
MabI	ACCWGGT	1 cut(s)	294
MaeI	CTAG	3 cut(s)	1368, 1856, 2241
MaeII	ACGT	4 cut(s)	84, 771, 1521, 1533
MaeIII	GTNAC	6 cut(s)	662, 680, 1022, 1460, 1704, 1985
MalI	GATC	5 cut(s)	53, 1416, 1694, 2068, 2272
MboI	GATC	5 cut(s)	51, 1414, 1692, 2066, 2270
MboII	GAAGA	8 cut(s)	229, 335, 1151, 1297, 1460, 1516, 2014, 2416
MfeI	CAATTG	3 cut(s)	222, 1661, 2352
MhlI	GDGCHC	2 cut(s)	1758, 2351
MlsI	TGGCCA	3 cut(s)	181, 918, 1942
MluNI	TGGCCA	3 cut(s)	181, 918, 1942
MlyI	GAGTC	5 cut(s)	207, 934, 1067, 1728, 2351
MmeI	TCCRAC	5 cut(s)	1579, 1648, 1711, 2137, 2314
Mox20I	TGGCCA	3 cut(s)	181, 918, 1942
Mph1103I	ATGCAT	1 cut(s)	2179
MroXI	GAANNNNTTC	2 cut(s)	258, 1260
MscI	TGGCCA	3 cut(s)	181, 918, 1942
MseI	TTAA	3 cut(s)	552, 1482, 2277
MslI	CAYNNNNRTG	2 cut(s)	175, 1476
Msp20I	TGGCCA	3 cut(s)	181, 918, 1942
MspI	CCGG	1 cut(s)	1563
MspR9I	CCNGG	2 cut(s)	296, 1563
MunI	CAATTG	3 cut(s)	222, 1661, 2352
Mva1269I	GAATGC	1 cut(s)	250
MvaI	CCWGG	1 cut(s)	296
MvnI	CGCG	1 cut(s)	2065
MwoI	GCNNNNNNNGC	7 cut(s)	542, 569, 1077, 1364, 1939, 2214, 2420
NciI	CCSGG	1 cut(s)	1563
NcoI	CCATGG	3 cut(s)	596, 975, 1738
NdeI	CATATG	2 cut(s)	358, 2179
NdeII	GATC	5 cut(s)	51, 1414, 1692, 2066, 2270
NheI	GCTAGC	1 cut(s)	2240
NlaIV	GGNNCC	6 cut(s)	145, 401, 1560, 1956, 2287, 2380
NmuCI	GTSAC	3 cut(s)	662, 1704, 1985
NsbI	TGCGCA	1 cut(s)	249
NsiI	ATGCAT	1 cut(s)	2179
NspI	RCATGY	5 cut(s)	648, 832, 1496, 1907, 2208
NspV	TTCGAA	1 cut(s)	427
OliI	CACNNNNGTG	1 cut(s)	175
PaeI	GCATGC	1 cut(s)	2208
PagI	TCATGA	2 cut(s)	447, 958
PciI	ACATGT	3 cut(s)	644, 828, 1492
PctI	GAATGC	1 cut(s)	250
PdmI	GAANNNNTTC	2 cut(s)	258, 1260
PfeI	GAWTC	5 cut(s)	316, 518, 575, 1256, 2185
PflMI	CCANNNNNTGG	1 cut(s)	1964
PfoI	TCCNGGA	1 cut(s)	1561
PkrI	GCNGC	5 cut(s)	62, 865, 1070, 1357, 1513
PleI	GAGTC	5 cut(s)	207, 933, 1066, 1728, 2350
PpsI	GAGTC	5 cut(s)	207, 933, 1066, 1728, 2350
PscI	ACATGT	3 cut(s)	644, 828, 1492
PshAI	GACNNNNGTC	1 cut(s)	233
PsiI	TTATAA	1 cut(s)	1518
Psp124BI	GAGCTC	1 cut(s)	1758
Psp6I	CCWGG	1 cut(s)	294
PspFI	CCCAGC	2 cut(s)	735, 1299
PspGI	CCWGG	1 cut(s)	294
PspN4I	GGNNCC	6 cut(s)	145, 401, 1560, 1956, 2287, 2380
PspPI	GGNCC	4 cut(s)	353, 473, 1278, 1652
PstI	CTGCAG	1 cut(s)	62
RsaI	GTAC	2 cut(s)	166, 1385
RsaNI	GTAC	2 cut(s)	165, 1384
RseI	CAYNNNNRTG	2 cut(s)	175, 1476
SacI	GAGCTC	1 cut(s)	1758
SaqAI	TTAA	3 cut(s)	552, 1482, 2277
SatI	GCNGC	5 cut(s)	61, 864, 1069, 1356, 1512
Sau3AI	GATC	5 cut(s)	51, 1414, 1692, 2066, 2270
Sau96I	GGNCC	4 cut(s)	353, 473, 1278, 1652
SchI	GAGTC	5 cut(s)	207, 934, 1067, 1728, 2351
ScrFI	CCNGG	2 cut(s)	296, 1563
SduI	GDGCHC	2 cut(s)	1758, 2351
SexAI	ACCWGGT	1 cut(s)	294
SfaNI	GCATC	8 cut(s)	208, 470, 523, 610, 638, 886, 1090, 1354
SfcI	CTRYAG	2 cut(s)	58, 1212
SfuI	TTCGAA	1 cut(s)	427
SinI	GGWCC	2 cut(s)	353, 1652
SmiMI	CAYNNNNRTG	2 cut(s)	175, 1476
SmlI	CTYRAG	1 cut(s)	465
SmoI	CTYRAG	1 cut(s)	465
SphI	GCATGC	1 cut(s)	2208
SsiI	CCGC	2 cut(s)	627, 2063
SspI	AATATT	1 cut(s)	1003
SspMI	CTAG	3 cut(s)	1368, 1856, 2241
SstI	GAGCTC	1 cut(s)	1758
StyD4I	CCNGG	2 cut(s)	294, 1561
StyI	CCWWGG	6 cut(s)	596, 975, 1117, 1738, 1855, 2209
TaaI	ACNGT	7 cut(s)	419, 1042, 1216, 1597, 1690, 1994, 2030
TaiI	ACGT	4 cut(s)	87, 774, 1524, 1536
TaqI	TCGA	4 cut(s)	160, 216, 427, 1539
TatI	WGTACW	1 cut(s)	164
TfiI	GAWTC	5 cut(s)	316, 518, 575, 1256, 2185
Tru1I	TTAA	3 cut(s)	552, 1482, 2277
Tru9I	TTAA	3 cut(s)	552, 1482, 2277
TscAI	CASTG	4 cut(s)	1045, 1195, 1221, 1594
TseFI	GTSAC	3 cut(s)	662, 1704, 1985
TseI	GCWGC	5 cut(s)	60, 863, 1068, 1355, 1511
Tsp45I	GTSAC	3 cut(s)	662, 1704, 1985
TspGWI	ACGGA	1 cut(s)	1304
TspRI	CASTG	4 cut(s)	1045, 1195, 1221, 1594
Van91I	CCANNNNNTGG	1 cut(s)	1964
VpaK11BI	GGWCC	2 cut(s)	353, 1652
XagI	CCTNNNNNAGG	1 cut(s)	2321
XapI	RAATTY	4 cut(s)	136, 2111, 2137, 2234
XceI	RCATGY	5 cut(s)	648, 832, 1496, 1907, 2208
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1015
XmaJI	CCTAGG	1 cut(s)	1855
XmnI	GAANNNNTTC	2 cut(s)	258, 1260
XspI	CTAG	3 cut(s)	1368, 1856, 2241
Zsp2I	ATGCAT	1 cut(s)	2179

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.