Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0001959

Physical Location & Seq

Genomic Coordinates Forward (+)

18239157 .. 18243669

Gene Structure 4513 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g26380.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2472 bp

ATGGCTCACCCCAAGAGTTTTACATACTCTCTTTGTTTCTTTCTTTCTGTGATCCTCTGCAGCTTTGTTGCTAGTGCCACAGACGTTTCTTATGACGGCAGAGCCATCACCATTGATGGCAAACGAAGGATATTGCAATCTGGTTCCATTCATTATCCTCGAAGCACACCACAAATGTGGCCAGACTTGATTAGGAAGTCAAAGGAAGGTGGACTCGATGCCATTGAGACTTATGTCTTCTGGAATGCGCATGAACCAGTTCGTCGCGAGTACGATTTTACTGGTAATCTTGACCTGGTTAGGTTTCTCAAAACTGTTCAAGAGGAAGGACTTTATGCTGTTCTTCGGATTGGTCCGTATGTTTGTGCTGAATGGAATTATGGAGGACTTCCTGTTTGGCTCCATAACTTGCCGAACTGCCAGATTCGAACAGCAAACGATGTGTTCATGAATGAGATGAAGAATTTCACTACATTGATCGTCGATATGATGAAAAAAGAGAAACTATTTGCATCACAAGGTGGCCCTATCATTATTGCTCAGATTGAAAATGAATATGGGAATGTGGAGTCATACTATGGTGATGCTGGAAAAGCATACATCAACTGGTGTGCAAATTTTGCTGAATCGCTGAACATTGGAGTTCCATGGATTATGTGTCAACAAAAAGATGCACCCGCATCAATGATAAACACATGCAATGGCTGGTATTGTGACACATTCAAGCCAAGTAACCCCAACACTCCTAAGATGTGGACTGAAAACTGGACTGGCTGGTTCAAGAGCTGGGGTGGTTTAGACCCACTCAGAACTGCCGAGGACGTTGCCTTTGCTGTAGCAAGGTTTTTCCAATATGGAGGCACATTCCAAAACTATTACATGTATCATGGTGGAACAAACTTTGATAGAACAGCAGCTTCATACATTACCACCTCGTATGATTATGATGCCCCTCTTGATGAGTATGGTCATCTGAATCAACCAAAATGGGGGCATTTGAAAGAGCTTCATGAGGTTTTGAAATCCATGGAACATGTTCTCACCTATGGTAATATTACCACAACAGAGCTGGGTAACTCTCTCTCGACCACTGTGTTTGCAACAAACGAGTCCAGTGGCTGCATTTTTGGCAATGCAAATAACAGTGTTGATGCTACAATCACTTTTCAAGGAAAAACACACACTATTCCTGCTTGGTCTGTTAGTATTCTTCCTGATTGCAAAGAAGAAGCATACAACACTGCTAAGGTAAACACCCAAACTACAATTAAAGTAAAAAGTGTGAACAAGGCTGAGGATGAACTTCAATCTCTTCAATGGTCATGGAGGCCCGAGAAGATTCACACAGAGCTTCTTGGAAAAGGTGAGGTTGTGGCAAATCGTCTTATGGAACAAAAAGAAGCTGCAAATGATGCTAGTGATTATCTTTGGTACATGACAAGTGTACAAATCAGTAAGGATGATCCAGTTTTGATTGGGAACATGACATTGAGGATAAATGAAACCGGTTACATTCTTCATGCTTATGTTAATGGAGAACATGTTGGTTCTCAATGGGCTAAATATAACGTGTTCAACTACGTTTTCGAGAAACCTATCACGTTGGTTCCCGGAGTGAACACAATTTCATTGCTCAGTGCTACTGTTGGATTTCCGAATTATGGAGGTGGCTTTGAGGACATCAAAACTGGAATTGTTGGTCCTGTTGAATTGGTTGGACAAAGTGGAGATGAAACAGTGATCAAGAATTTGTCTGAACGCAAATGGTCATACAAGGTTGGACTCCATGGCATGAAAGACCAGCTCTTTAGCTCTGCTTCTCGTAAATGGTCAGTTGAAGGTTTACCAGTAAACAGGACGATGACTTGGTATAAGACCACTTTCAAAGCTCCCCTAGGAACTGAACCAGTCGTGGTGGACTTACAAGGGTTGGGCAAAGGCAATGCTTGGGTGAATGGTCATAGCATTGGGCGATATTGGCCAAGTTACTTGGCTCAAACAGATGGCTGTAGTCTTCAGGCTTGTGACTACCGTGGTACATACGACAACAACAAGTGTGTATTCAACTGTGGCAAACCTACTCAAAGATGGTATCATATTCCGCGATCGTTTTTGCAAGATGATGAGAACACATTGGTCTTGTTCGAGGAATTTGGTGGCAACCCATCATATGTGAATTTCCAAACAATCAGAGTTGGAACTATCTGTGCAAATGCATATGAGAATCACACATTGAAATTAGCATGCCAAGGTCGTCCCATTTCAGCCATCAAGTTCGCAAGCTTTGGAAACCCAGAAGGAACTTGTGGATCATTTAGGAAAGGCACCTGTGATAGCACAACTGCTTTGTCCATCCTGCAAAAAGAATGTGTTGGAAAAGAGTCGTGCTCGATTGACGTATCAGAAAGCATGTTTGGTTACACAACTTGTGGCGATATTATGAAGAGGCTGGCCGTGGAGGCAGTTTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0015925 GO:0016787 GO:0016798 GO:0030312 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BetaGal_dom4_5 Gal_Lectin Glyco_hydro_35

Protein Analysis

824

Amino Acids

92.18

Weight (kDa)

5.86

Isoelectric Point (pI)

32.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_35	PF01301	36 - 338	4.8e-118	Glycosyl hydrolases family 35
Glyco_hydro_42	PF02449	57 - 206	4.2e-07	Beta-galactosidase
GHD	PF17834	363 - 417	2.2e-20	Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd	PF21467	621 - 710	3.4e-24	Beta-galactosidase, galactose-binding domain
SUEL_Lectin	PF02140	748 - 823	7.4e-19	D-galactoside/L-rhamnose binding SUEL lectin domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001959)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31740 AT2G04060 AT5G20710 AT5G20710
fragaria_vesca	FvH4_1g09120 FvH4_1g09190 FvH4_1g09190 FvH4_1g26380
malus_domestica	MD02G1096400.v1.1 MD03G1276000.v1.1 MD15G1220900.v1.1 MD15G1221000.v1.1
prunus_persica	Prupe.7G194500_v2.0.a1
pyrus_communis	pycom02g07640
rosa_chinensis	RchiOBHm_Chr2g0095511 RchiOBHm_Chr2g0095591 RchiOBHm_Chr5g0030701
rosa_laevigata	RLG00000016574 RLG00000016582 RLG00000016583
rosa_multiflora	Rmu_co8462209.1_g000001 Rmu_sc0003238.1_g000025 Rmu_sc0003238.1_g000028 Rmu_sc0004719.1_g000009
rosa_roxburghii	Rroxscaffold_2G00146240
rosa_rugosa	Rorug02G0051800 Rorug02G0052600 Rorug05G0120200
rosa_samantha	Rh2AG099800 Rh2AG100400 Rh2BG101100 Rh2BG102200 Rh2CG103300 Rh2CG104600 Rh2DG100700 Rh2DG101500 Rh5AG211800 Rh5BG210700 Rh5CG234400 Rh5CG234500 Rh5DG216100
rosa_wichuraiana	Rw2G007570 Rw2G007630 Rw2G007640 Rw5G019420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	249
AccB1I	GGYRCC	1 cut(s)	2324
AccII	CGCG	2 cut(s)	267, 2104
AciI	CCGC	2 cut(s)	678, 2102
AclWI	GGATC	3 cut(s)	46, 1457, 2317
AcoI	YGGCCR	3 cut(s)	179, 1979, 2451
AcsI	RAATTY	5 cut(s)	463, 616, 1747, 2150, 2176
AcuI	CTGAAG	1 cut(s)	2000
AdeI	CACNNNGTG	1 cut(s)	521
AfaI	GTAC	4 cut(s)	272, 1433, 1446, 2038
AfiI	CCNNNNNNNGG	2 cut(s)	989, 1661
AflIII	ACRYGT	4 cut(s)	879, 1033, 1540, 1569
AgeI	ACCGGT	1 cut(s)	1505
AjnI	CCWGG	1 cut(s)	294
AjuI	GAANNNNNNNTTGG	2 cut(s)	2397, 2429
AleI	CACNNNNGTG	1 cut(s)	175
Alw21I	GWGCWC	1 cut(s)	2390
Alw26I	GTCTC	1 cut(s)	221
AlwI	GGATC	3 cut(s)	46, 1457, 2317
AlwNI	CAGNNNCTG	1 cut(s)	1119
Ama87I	CYCGRG	1 cut(s)	1331
AoxI	GGCC	5 cut(s)	179, 523, 1328, 1979, 2451
ApeKI	GCWGC	4 cut(s)	60, 914, 1119, 1403
ApoI	RAATTY	5 cut(s)	463, 616, 1747, 2150, 2176
ArsI	GACNNNNNNTTYG	4 cut(s)	378, 410, 812, 844
AsiGI	ACCGGT	1 cut(s)	1505
Asp700I	GAANNNNTTC	3 cut(s)	258, 464, 1035
AspA2I	CCTAGG	1 cut(s)	1894
AspLEI	GCGC	1 cut(s)	250
AspS9I	GGNCC	4 cut(s)	353, 524, 1329, 1700
AsuC2I	CCSGG	1 cut(s)	1611
AsuHPI	GGTGA	5 cut(s)	100, 593, 1033, 1376, 1963
AsuII	TTCGAA	1 cut(s)	427
AvaI	CYCGRG	1 cut(s)	1331
AvaII	GGWCC	2 cut(s)	353, 1700
AvrII	CCTAGG	1 cut(s)	1894
BalI	TGGCCA	2 cut(s)	181, 1981
BanI	GGYRCC	1 cut(s)	2324
BbsI	GAAGAC	2 cut(s)	229, 2006
Bbv12I	GWGCWC	1 cut(s)	2390
BbvCI	CCTCAGC	1 cut(s)	1293
BbvI	GCAGC	4 cut(s)	72, 926, 1106, 1390
BccI	CCATC	7 cut(s)	110, 113, 1997, 2082, 2173, 2276, 2360
BceAI	ACGGC	2 cut(s)	112, 2438
BcgI	CGANNNNNNTGC	2 cut(s)	806, 840
BciT130I	CCWGG	1 cut(s)	296
BclI	TGATCA	1 cut(s)	1740
BcnI	CCSGG	1 cut(s)	1611
BcoDI	GTCTC	1 cut(s)	221
BfaI	CTAG	3 cut(s)	72, 1416, 1895
BfmI	CTRYAG	3 cut(s)	58, 834, 2008
BglI	GCCNNNNNGGC	1 cut(s)	2459
BisI	GCNGC	4 cut(s)	61, 915, 1120, 1404
BlnI	CCTAGG	1 cut(s)	1894
BlsI	GCNGC	4 cut(s)	62, 916, 1121, 1405
Bme1390I	CCNGG	2 cut(s)	296, 1611
Bme18I	GGWCC	2 cut(s)	353, 1700
BmeT110I	CYCGRG	1 cut(s)	1331
BmgT120I	GGNCC	4 cut(s)	353, 524, 1329, 1700
BmiI	GGNNCC	4 cut(s)	145, 401, 1608, 2326
BmrFI	CCNGG	2 cut(s)	296, 1611
BmsI	GCATC	8 cut(s)	208, 521, 574, 661, 689, 937, 1141, 1402
BoxI	GACNNNNGTC	1 cut(s)	233
BpiI	GAAGAC	2 cut(s)	229, 2006
BplI	GAGNNNNNCTC	2 cut(s)	2372, 2404
Bpu10I	CCTNAGC	2 cut(s)	1245, 1293
Bpu14I	TTCGAA	1 cut(s)	427
BpuMI	CCSGG	1 cut(s)	1611
BsaJI	CCNNGG	8 cut(s)	647, 816, 1026, 1786, 1894, 2032, 2248, 2454
BsaWI	WCCGGW	1 cut(s)	1505
BsaXI	ACNNNNNCTCC	2 cut(s)	1527, 1557
Bsc4I	CCNNNNNNNGG	2 cut(s)	989, 1661
Bse118I	RCCGGY	1 cut(s)	1505
Bse3DI	GCAATG	4 cut(s)	706, 1138, 1628, 1948
BseBI	CCWGG	1 cut(s)	296
BseDI	CCNNGG	8 cut(s)	647, 816, 1026, 1786, 1894, 2032, 2248, 2454
BseGI	GGATG	3 cut(s)	1303, 1465, 2352
BseLI	CCNNNNNNNGG	2 cut(s)	989, 1661
BseMI	GCAATG	4 cut(s)	706, 1138, 1628, 1948
BseMII	CTCAG	4 cut(s)	554, 820, 1284, 1648
BseXI	GCAGC	4 cut(s)	72, 926, 1106, 1390
BseYI	CCCAGC	2 cut(s)	786, 1069
Bsh1236I	CGCG	2 cut(s)	267, 2104
Bsh1285I	CGRYCG	1 cut(s)	2108
BshFI	GGCC	5 cut(s)	181, 525, 1330, 1981, 2453
BshNI	GGYRCC	1 cut(s)	2324
BshTI	ACCGGT	1 cut(s)	1505
BsiEI	CGRYCG	1 cut(s)	2108
BsiHKAI	GWGCWC	1 cut(s)	2390
BsiHKCI	CYCGRG	1 cut(s)	1331
BsiSI	CCGG	2 cut(s)	1506, 1611
BslFI	GGGAC	1 cut(s)	2241
BslI	CCNNNNNNNGG	2 cut(s)	989, 1661
BsmAI	GTCTC	1 cut(s)	221
BsmFI	GGGAC	1 cut(s)	2241
BsmI	GAATGC	1 cut(s)	250
BsnI	GGCC	5 cut(s)	181, 525, 1330, 1981, 2453
BsoBI	CYCGRG	1 cut(s)	1331
Bsp119I	TTCGAA	1 cut(s)	427
Bsp1286I	GDGCHC	1 cut(s)	2390
Bsp1407I	TGTACA	1 cut(s)	1444
Bsp143I	GATC	6 cut(s)	51, 477, 1462, 1740, 2105, 2309
Bsp19I	CCATGG	3 cut(s)	647, 1026, 1786
Bsp68I	TCGCGA	1 cut(s)	267
BspACI	CCGC	2 cut(s)	678, 2102
BspANI	GGCC	5 cut(s)	181, 525, 1330, 1981, 2453
BspCNI	CTCAG	4 cut(s)	553, 819, 1285, 1647
BspFNI	CGCG	2 cut(s)	267, 2104
BspHI	TCATGA	2 cut(s)	447, 1009
BspLI	GGNNCC	4 cut(s)	145, 401, 1608, 2326
BspMAI	CTGCAG	1 cut(s)	62
BspPI	GGATC	3 cut(s)	46, 1457, 2317
BspT104I	TTCGAA	1 cut(s)	427
BspT107I	GGYRCC	1 cut(s)	2324
BsrDI	GCAATG	4 cut(s)	706, 1138, 1628, 1948
BsrFI	RCCGGY	1 cut(s)	1505
BsrGI	TGTACA	1 cut(s)	1444
BssAI	RCCGGY	1 cut(s)	1505
BssECI	CCNNGG	8 cut(s)	647, 816, 1026, 1786, 1894, 2032, 2248, 2454
BssMI	GATC	6 cut(s)	51, 477, 1462, 1740, 2105, 2309
BssT1I	CCWWGG	5 cut(s)	647, 1026, 1786, 1894, 2248
Bst2UI	CCWGG	1 cut(s)	296
Bst4CI	ACNGT	7 cut(s)	316, 1093, 1145, 1645, 1738, 2033, 2069
Bst6I	CTCTTC	2 cut(s)	1317, 2438
BstAPI	GCANNNNNTGC	2 cut(s)	620, 1412
BstAUI	TGTACA	1 cut(s)	1444
BstBI	TTCGAA	1 cut(s)	427
BstC8I	GCNNGC	3 cut(s)	2245, 2281, 2451
BstDEI	CTNAG	6 cut(s)	540, 747, 806, 1245, 1293, 1634
BstDSI	CCRYGG	5 cut(s)	647, 1026, 1786, 2032, 2454
BstF5I	GGATG	3 cut(s)	1303, 1465, 2352
BstFNI	CGCG	2 cut(s)	267, 2104
BstHHI	GCGC	1 cut(s)	250
BstKTI	GATC	6 cut(s)	54, 480, 1465, 1743, 2108, 2312
BstMAI	GTCTC	1 cut(s)	221
BstMBI	GATC	6 cut(s)	51, 477, 1462, 1740, 2105, 2309
BstMCI	CGRYCG	1 cut(s)	2108
BstMWI	GCNNNNNNNGC	6 cut(s)	593, 620, 1128, 1412, 1978, 2459
BstNI	CCWGG	1 cut(s)	296
BstNSI	RCATGY	6 cut(s)	699, 883, 1037, 1544, 2247, 2413
BstPAI	GACNNNNGTC	1 cut(s)	233
BstSCI	CCNGG	2 cut(s)	294, 1609
BstSFI	CTRYAG	3 cut(s)	58, 834, 2008
BstUI	CGCG	2 cut(s)	267, 2104
BstV1I	GCAGC	4 cut(s)	72, 926, 1106, 1390
BstV2I	GAAGAC	2 cut(s)	229, 2006
BstXI	CCANNNNNNTGG	1 cut(s)	177
BsuRI	GGCC	5 cut(s)	181, 525, 1330, 1981, 2453
BtgI	CCRYGG	5 cut(s)	647, 1026, 1786, 2032, 2454
BtsCI	GGATG	3 cut(s)	1303, 1465, 2352
BtsI	GCAGTG	1 cut(s)	1239
BtsIMutI	CAGTG	6 cut(s)	1089, 1120, 1150, 1239, 1642, 1743
BtuMI	TCGCGA	1 cut(s)	267
Cac8I	GCNNGC	3 cut(s)	2245, 2281, 2451
CaiI	CAGNNNCTG	1 cut(s)	1119
CciI	TCATGA	2 cut(s)	447, 1009
CfoI	GCGC	1 cut(s)	250
Cfr10I	RCCGGY	1 cut(s)	1505
Cfr13I	GGNCC	4 cut(s)	353, 524, 1329, 1700
CsiI	ACCWGGT	1 cut(s)	294
Csp6I	GTAC	4 cut(s)	271, 1432, 1445, 2037
CspAI	ACCGGT	1 cut(s)	1505
CspCI	CAANNNNNGTGG	2 cut(s)	1078, 1113
CviQI	GTAC	4 cut(s)	271, 1432, 1445, 2037
DdeI	CTNAG	6 cut(s)	540, 747, 806, 1245, 1293, 1634
DpnI	GATC	6 cut(s)	53, 479, 1464, 1742, 2107, 2311
DpnII	GATC	6 cut(s)	51, 477, 1462, 1740, 2105, 2309
DraIII	CACNNNGTG	1 cut(s)	521
EaeI	YGGCCR	3 cut(s)	179, 1979, 2451
Eam1104I	CTCTTC	2 cut(s)	1317, 2438
EarI	CTCTTC	2 cut(s)	1317, 2438
Eco130I	CCWWGG	5 cut(s)	647, 1026, 1786, 1894, 2248
Eco47I	GGWCC	2 cut(s)	353, 1700
Eco57I	CTGAAG	1 cut(s)	2000
Eco88I	CYCGRG	1 cut(s)	1331
EcoRII	CCWGG	1 cut(s)	294
EcoT14I	CCWWGG	5 cut(s)	647, 1026, 1786, 1894, 2248
EcoT22I	ATGCAT	1 cut(s)	2218
ErhI	CCWWGG	5 cut(s)	647, 1026, 1786, 1894, 2248
FaqI	GGGAC	1 cut(s)	2241
FauI	CCCGC	1 cut(s)	685
FauNDI	CATATG	2 cut(s)	2170, 2218
FbaI	TGATCA	1 cut(s)	1740
Fnu4HI	GCNGC	4 cut(s)	61, 915, 1120, 1404
FokI	GGATG	3 cut(s)	1310, 1472, 2339
Fsp4HI	GCNGC	4 cut(s)	61, 915, 1120, 1404
FspAI	RTGCGCAY	1 cut(s)	249
FspBI	CTAG	3 cut(s)	72, 1416, 1895
FspI	TGCGCA	1 cut(s)	249
GlaI	GCGC	1 cut(s)	249
GluI	GCNGC	4 cut(s)	61, 915, 1120, 1404
GsaI	CCCAGC	2 cut(s)	790, 1073
HaeIII	GGCC	5 cut(s)	181, 525, 1330, 1981, 2453
HapII	CCGG	2 cut(s)	1506, 1611
HhaI	GCGC	1 cut(s)	250
Hin6I	GCGC	1 cut(s)	248
HinP1I	GCGC	1 cut(s)	248
HincII	GTYRAC	1 cut(s)	662
HindII	GTYRAC	1 cut(s)	662
HindIII	AAGCTT	1 cut(s)	2281
HpaII	CCGG	2 cut(s)	1506, 1611
HphI	GGTGA	5 cut(s)	100, 593, 1033, 1376, 1963
Hpy188I	TCNGA	8 cut(s)	348, 543, 809, 975, 1656, 1756, 2192, 2404
Hpy99I	CGWCG	2 cut(s)	267, 485
HpyAV	CCTTC	5 cut(s)	120, 200, 320, 1832, 2291
HpyCH4III	ACNGT	7 cut(s)	316, 1093, 1145, 1645, 1738, 2033, 2069
HpyCH4IV	ACGT	6 cut(s)	84, 822, 1569, 1581, 1601, 2397
HpyF10VI	GCNNNNNNNGC	6 cut(s)	593, 620, 1128, 1412, 1978, 2459
HpyF3I	CTNAG	6 cut(s)	540, 747, 806, 1245, 1293, 1634
HpySE526I	ACGT	6 cut(s)	84, 822, 1569, 1581, 1601, 2397
HspAI	GCGC	1 cut(s)	248
Ksp22I	TGATCA	1 cut(s)	1740
Kzo9I	GATC	6 cut(s)	51, 477, 1462, 1740, 2105, 2309
LmnI	GCTCC	2 cut(s)	405, 1894
Lsp1109I	GCAGC	4 cut(s)	72, 926, 1106, 1390
LweI	GCATC	8 cut(s)	208, 521, 574, 661, 689, 937, 1141, 1402
MabI	ACCWGGT	1 cut(s)	294
MaeI	CTAG	3 cut(s)	72, 1416, 1895
MaeII	ACGT	6 cut(s)	84, 822, 1569, 1581, 1601, 2397
MaeIII	GTNAC	7 cut(s)	713, 731, 1073, 1508, 1985, 2024, 2417
MalI	GATC	6 cut(s)	53, 479, 1464, 1742, 2107, 2311
MboI	GATC	6 cut(s)	51, 477, 1462, 1740, 2105, 2309
MhlI	GDGCHC	1 cut(s)	2390
MlsI	TGGCCA	2 cut(s)	181, 1981
MluNI	TGGCCA	2 cut(s)	181, 1981
MlyI	GAGTC	5 cut(s)	207, 578, 1118, 1776, 2390
MmeI	TCCRAC	5 cut(s)	1627, 1696, 1759, 2176, 2353
Mox20I	TGGCCA	2 cut(s)	181, 1981
Mph1103I	ATGCAT	1 cut(s)	2218
MroXI	GAANNNNTTC	3 cut(s)	258, 464, 1035
MscI	TGGCCA	2 cut(s)	181, 1981
MseI	TTAA	2 cut(s)	1269, 1530
MslI	CAYNNNNRTG	2 cut(s)	175, 1524
Msp20I	TGGCCA	2 cut(s)	181, 1981
MspI	CCGG	2 cut(s)	1506, 1611
MspR9I	CCNGG	2 cut(s)	296, 1611
Mva1269I	GAATGC	1 cut(s)	250
MvaI	CCWGG	1 cut(s)	296
MvnI	CGCG	2 cut(s)	267, 2104
MwoI	GCNNNNNNNGC	6 cut(s)	593, 620, 1128, 1412, 1978, 2459
NciI	CCSGG	1 cut(s)	1611
NcoI	CCATGG	3 cut(s)	647, 1026, 1786
NdeI	CATATG	2 cut(s)	2170, 2218
NdeII	GATC	6 cut(s)	51, 477, 1462, 1740, 2105, 2309
NlaIV	GGNNCC	4 cut(s)	145, 401, 1608, 2326
NmeAIII	GCCGAG	1 cut(s)	841
NmuCI	GTSAC	2 cut(s)	713, 2024
NruI	TCGCGA	1 cut(s)	267
NsbI	TGCGCA	1 cut(s)	249
NsiI	ATGCAT	1 cut(s)	2218
NspI	RCATGY	6 cut(s)	699, 883, 1037, 1544, 2247, 2413
NspV	TTCGAA	1 cut(s)	427
OliI	CACNNNNGTG	1 cut(s)	175
PaeI	GCATGC	1 cut(s)	2247
PagI	TCATGA	2 cut(s)	447, 1009
PciI	ACATGT	3 cut(s)	879, 1033, 1540
PctI	GAATGC	1 cut(s)	250
PdmI	GAANNNNTTC	3 cut(s)	258, 464, 1035
PfeI	GAWTC	5 cut(s)	424, 626, 976, 1339, 2224
PfoI	TCCNGGA	1 cut(s)	1609
PinAI	ACCGGT	1 cut(s)	1505
PkrI	GCNGC	4 cut(s)	62, 916, 1121, 1405
Ple19I	CGATCG	1 cut(s)	2108
PleI	GAGTC	5 cut(s)	207, 577, 1117, 1776, 2389
PpsI	GAGTC	5 cut(s)	207, 577, 1117, 1776, 2389
PscI	ACATGT	3 cut(s)	879, 1033, 1540
PshAI	GACNNNNGTC	1 cut(s)	233
Psp6I	CCWGG	1 cut(s)	294
PspFI	CCCAGC	2 cut(s)	786, 1069
PspGI	CCWGG	1 cut(s)	294
PspN4I	GGNNCC	4 cut(s)	145, 401, 1608, 2326
PspPI	GGNCC	4 cut(s)	353, 524, 1329, 1700
PstI	CTGCAG	1 cut(s)	62
PstNI	CAGNNNCTG	1 cut(s)	1119
PvuI	CGATCG	1 cut(s)	2108
RruI	TCGCGA	1 cut(s)	267
RsaI	GTAC	4 cut(s)	272, 1433, 1446, 2038
RsaNI	GTAC	4 cut(s)	271, 1432, 1445, 2037
RseI	CAYNNNNRTG	2 cut(s)	175, 1524
SaqAI	TTAA	2 cut(s)	1269, 1530
SatI	GCNGC	4 cut(s)	61, 915, 1120, 1404
Sau3AI	GATC	6 cut(s)	51, 477, 1462, 1740, 2105, 2309
Sau96I	GGNCC	4 cut(s)	353, 524, 1329, 1700
SchI	GAGTC	5 cut(s)	207, 578, 1118, 1776, 2390
ScrFI	CCNGG	2 cut(s)	296, 1611
SduI	GDGCHC	1 cut(s)	2390
SexAI	ACCWGGT	1 cut(s)	294
SfaNI	GCATC	8 cut(s)	208, 521, 574, 661, 689, 937, 1141, 1402
SfcI	CTRYAG	3 cut(s)	58, 834, 2008
SfuI	TTCGAA	1 cut(s)	427
SinI	GGWCC	2 cut(s)	353, 1700
SmiMI	CAYNNNNRTG	2 cut(s)	175, 1524
SphI	GCATGC	1 cut(s)	2247
SsiI	CCGC	2 cut(s)	678, 2102
SspI	AATATT	1 cut(s)	1054
SspMI	CTAG	3 cut(s)	72, 1416, 1895
StyD4I	CCNGG	2 cut(s)	294, 1609
StyI	CCWWGG	5 cut(s)	647, 1026, 1786, 1894, 2248
TaaI	ACNGT	7 cut(s)	316, 1093, 1145, 1645, 1738, 2033, 2069
TaiI	ACGT	6 cut(s)	87, 825, 1572, 1584, 1604, 2400
TaqI	TCGA	8 cut(s)	160, 216, 427, 483, 1085, 1587, 2145, 2390
TatI	WGTACW	1 cut(s)	1444
TfiI	GAWTC	5 cut(s)	424, 626, 976, 1339, 2224
Tru1I	TTAA	2 cut(s)	1269, 1530
Tru9I	TTAA	2 cut(s)	1269, 1530
TscAI	CASTG	6 cut(s)	1096, 1120, 1150, 1246, 1642, 1743
TseFI	GTSAC	2 cut(s)	713, 2024
TseI	GCWGC	4 cut(s)	60, 914, 1119, 1403
Tsp45I	GTSAC	2 cut(s)	713, 2024
TspGWI	ACGGA	1 cut(s)	345
TspRI	CASTG	6 cut(s)	1096, 1120, 1150, 1246, 1642, 1743
VpaK11BI	GGWCC	2 cut(s)	353, 1700
XapI	RAATTY	5 cut(s)	463, 616, 1747, 2150, 2176
XceI	RCATGY	6 cut(s)	699, 883, 1037, 1544, 2247, 2413
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1066
XmaJI	CCTAGG	1 cut(s)	1894
XmnI	GAANNNNTTC	3 cut(s)	258, 464, 1035
XspI	CTAG	3 cut(s)	72, 1416, 1895
Zsp2I	ATGCAT	1 cut(s)	2218

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.