Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0001748

Physical Location & Seq

Genomic Coordinates Forward (+)

15823452 .. 15830032

Gene Structure 6581 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g23970.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2391 bp

ATGTATGTGGTGAAGAGAGACGGGCGCCAGGAGACCGTCCATTTCGACAAGATTACGGCTCGCTTGAAGAAGCTTAGCTATGGGCTCAGCATCGAGCACTGCGACCCGGTCCTGGTGGCCCAGAAGGTCTGCGCTGGAGTCTACAAGGGTGTTACTACTAGCCAGCTTGATGAATTGGCCGCCGAGACCGCTGCCGCTATGACTGCTAACCACCCTGACTATGCCTGCTTAGCTGCGAGGATTGTTGTTTCAAACCTACACAAGAACACTAAGAAGTCGTTTTCTGAGACGGTCAAAATTATGTACAACCATGTCAATGATAGATCTGGGCTGGAATCTCCTCTGATAGCTGATGATGTTTATGAAATCATCATGAAGAATGCGGTTTGTTTGGACAGTGAGATCATTTATGATCGGGACTTTGACTATGACTACTTTGGTTTCAAGACTCTTGAGAGGTCATACCTCTTAAAGGTTCAAGGGAAGGTTGTAGAGAGGCCTCAGCATATGCTAATGAGGGTTGCTGTTGGAATACACAAGGATGATATTGAATCTGTTATCAAAACATACCATCTCATGTCTCAGCGGTGGTTCACTCATGCCTCTCCTACCCTTTTTAATTCTGGAACACCAAGACCACAATTGAGTAGCTGCTTCCTTGTATGCATGAAAGATGATAGCATTGAAGGCATATATGATACCTTGAAGGAATGTGCTGTCATCAGCAAATCAGCTGGGGGAATTGGTGTCTCTGTTCACAACATTCGTGCCACTGGCAGTTATATTCGTGGAACAAATGGGACATCCAATGGCATCATTCCTATGCTGCGAGTTTTTAATGATACTGCCCGTTATGTTGATCAGGGGGGAGGCAAAAGGAAAGGTGCTTTTGCTGTGTACTTGGAGCCCTGGCATGCTGATATATTTGACTTTCTGGATTTAAGGAAAAATCATGGAAAGGAAGAGAACAGAGCTCGTGATCTTTTTTATGCTCTTTGGGTGCCTGATCTGTTCATGAAAAGAGTTGAAAGCAATGGAGATTGGTCATTATTTTGTCCTAATGAGTCTCCAGGGTTGGCAGACTGCTGGGGTGAAAAATTTGAAGAGCTATACACTCGTTATGAAAGAGAGGGAAAGGCCAAAAAGGTTGTCTCAGCACAGCAACTGTGGTTTGAAGTGTTGAAATCCCAAATAGAAACGGGAACTCCCTACATGCTTTTTAAGGATACATGCAATAAGAAAAGCAATCAACAAAATCTGGGGACCATAAAAAGCTCAAACCTGTGTACAGAGATAATTGAATATACTAGTCCAACAGAAACTGCTGTATGCAATCTGGCATCAATTGCTCTACCACGATTTGTCAGGGAGGAGGGTGTTCCTTTTGAGTCACATCCATCTAAGCTTGCTGGAAGCAAAGGTTCTAAAAATCGATATTTTGACTTTGAAAAATTAGCAGAGGTTACTGCAATTGTCACTGTAAACCTCAACAAGATAATTGATGTTAATTACTATCCTGTTGAGAGTGCAAAGACATCCAATTTACGACACAGGCCAATTGGGATTGGGATTCAGGGTCTTGCTGATACCTTCATCTTGCTTGGCATGTCCTTTGATTCACCTGAGGCTCAACAACTGAATAAGGACATTTTTGAGACCATTTACTACCATGCCCTGAAAGCTTCTTCTGAGTTGGCCTTAAAAGAAGGCACATATGAAACATACCTGGGTTGTCCAGTTAGCAAGGGAATTCTTCAACCAGACATGTGGGGTGTAAAACCTTCAGATCGATGGGATTGGGGTGCTCTTCGGGAAATGATATCACAGAATGGAATCAGAAATTCACTGCTTGTTGCCCCAATGCCTACTGCGTCAACTAGCCAAATCCTTGGAAACAACGAGTGCTTTGAGCCATATACTTCTAATATCTACAGTCGCAGGGTTCTGAGTGGTGAATTTGTTGTGGTGAACAAGCATCTTCTCCATGACTTGGTTGAGATGGGTCTTTGGTCTCCTGCTATTAAGAATAAGATAATCTATGAGGATGGCTCTGTTCAGAAAATCCCACAAATCCCTGATGACCTGAAAGCCATTTACAGAACTGTGTGGGAGATAAAGCAAAAAACATTGGTTGACATGGCTGTTCATAGGGGATGCTACATAGATCAGAGTCAAAGTCTTAACATACATATGGACCAACCCAATTTCGGGAAGCTTACTTCATTGCACTTCTATGCTTGGAGACAGGGTCTTAAAACTGGAATGTACTATCTCCGATCACGTGCCGCAGCTGATGCAATCAAATTTACTGTTGATACTGAGAGTCTCAAAGAAAAGCCAACGGCTGTGGTCGAAAGTGATGACAATACCCAAATGGCACAGATGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004748 GO:0006139 GO:0006259 GO:0006260 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009117 GO:0009141 GO:0009142 GO:0009165 GO:0009200 GO:0009202 GO:0009262 GO:0009263 GO:0009987 GO:0010035 GO:0010038 GO:0016491 GO:0016725 GO:0016728 GO:0018130 GO:0019438 GO:0019637 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044281 GO:0046483 GO:0046686 GO:0050896 GO:0055086 GO:0055114 GO:0061731 GO:0071704 GO:0090304 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko00480 ko00983 ko01100 map00230 map00240 map00480 map00983 map01100

Pfam Domains

Protein Families

ATP-cone Ribonuc_red_lgC Ribonuc_red_lgN

Protein Analysis

797

Amino Acids

89.86

Weight (kDa)

6.72

Isoelectric Point (pI)

43.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ATP-cone	PF03477	1 - 88	5.2e-14	ATP cone domain
Ribonuc_red_lgN	PF00317	142 - 212	7.7e-25	Ribonucleotide reductase, all-alpha domain
Ribonuc_red_lgC	PF02867	216 - 757	1.6e-219	Ribonucleotide reductase, barrel domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001748)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21790
fragaria_vesca	FvH4_1g23970 FvH4_1g23970
malus_domestica	MD01G1010100.v1.1 MD15G1339400.v1.1
prunus_persica	Prupe.6G159900_v2.0.a1 Prupe.8G037800_v2.0.a1 Prupe.8G037800_v2.0.a1 Prupe.8G037800_v2.0.a1 Prupe.8G037800_v2.0.a1
pyrus_communis	pycom01g03750 pycom15g29920
rosa_chinensis	RchiOBHm_Chr1g0314231 RchiOBHm_Chr2g0120091 RchiOBHm_Chr4g0385701
rosa_laevigata	RLG00000015777 RLG00000018519
rosa_multiflora	Rmu_co8237057.1_g000001 Rmu_co8263959.1_g000001 Rmu_sc0000073.1_g000009 Rmu_sc0002754.1_g000003 Rmu_sc0007442.1_g000001 Rmu_sc0013299.1_g000004 Rmu_sc0026829.1_g000001 Rmu_sc0032207.1_g000001
rosa_roxburghii	Rroxscaffold_2G00093370 Rroxscaffold_2G00093380 Rroxscaffold_2G00123740
rosa_rugosa	Rorug02G0226700 Rorug02G0450900 Rorug05G0560100 Rorug06G0079200
rosa_samantha	Rh2AG283200 Rh2BG020700 Rh2BG294500 Rh2CG020400 Rh2CG021300 Rh2CG021400 Rh2CG021500 Rh2CG337900 Rh2DG021000 Rh2DG021100 Rh2DG021200 Rh2DG308200 Rh2DG687900 Rh5BG469900 Rh6AG111200
rosa_wichuraiana	Rw2G022680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	24, 1000
AccB7I	CCANNNNNTGG	1 cut(s)	1990
AccI	GTMKAC	1 cut(s)	141
AciI	CCGC	6 cut(s)	180, 189, 195, 383, 586, 2286
AcoI	YGGCCR	1 cut(s)	177
AcsI	RAATTY	5 cut(s)	1097, 1749, 1840, 1955, 2303
AcuI	CTGAAG	1 cut(s)	1767
AcvI	CACGTG	1 cut(s)	2282
AcyI	GRCGYC	1 cut(s)	25
AfaI	GTAC	4 cut(s)	305, 899, 1288, 2267
AfiI	CCNNNNNNNGG	5 cut(s)	112, 472, 1990, 2207, 2208
AflIII	ACRYGT	1 cut(s)	1764
AhlI	ACTAGT	1 cut(s)	1307
AjnI	CCWGG	5 cut(s)	27, 111, 908, 1069, 1725
Alw21I	GWGCWC	3 cut(s)	99, 976, 1807
AlwNI	CAGNNNCTG	2 cut(s)	1165, 1322
AoxI	GGCC	6 cut(s)	117, 177, 497, 1137, 1553, 1695
ApeKI	GCWGC	5 cut(s)	191, 233, 651, 826, 2288
ApoI	RAATTY	5 cut(s)	1097, 1749, 1840, 1955, 2303
ArsI	GACNNNNNNTTYG	2 cut(s)	1134, 1166
AspLEI	GCGC	2 cut(s)	27, 134
AspS9I	GGNCC	4 cut(s)	109, 118, 1263, 2194
AsuC2I	CCSGG	1 cut(s)	107
AsuHPI	GGTGA	5 cut(s)	22, 1103, 1611, 1964, 1978
AvaII	GGWCC	3 cut(s)	109, 1263, 2194
AxyI	CCTNAGG	1 cut(s)	1623
BanI	GGYRCC	2 cut(s)	24, 1000
BanII	GRGCYC	3 cut(s)	87, 909, 976
BauI	CACGAG	1 cut(s)	975
BbrPI	CACGTG	1 cut(s)	2282
Bbv12I	GWGCWC	3 cut(s)	99, 976, 1807
BbvCI	CCTCAGC	1 cut(s)	501
BbvI	GCAGC	5 cut(s)	178, 220, 638, 813, 2300
BccI	CCATC	6 cut(s)	579, 1405, 1785, 1993, 2039, 2377
BceAI	ACGGC	2 cut(s)	72, 2358
BcgI	CGANNNNNNTGC	2 cut(s)	173, 207
BciT130I	CCWGG	5 cut(s)	29, 113, 910, 1071, 1727
BciVI	GTATCC	1 cut(s)	1219
BclI	TGATCA	1 cut(s)	859
BcnI	CCSGG	1 cut(s)	107
BcuI	ACTAGT	1 cut(s)	1307
BfaI	CTAG	3 cut(s)	159, 1308, 1878
BfmI	CTRYAG	1 cut(s)	1930
BfoI	RGCGCY	1 cut(s)	28
BfuI	GTATCC	1 cut(s)	1219
BglII	AGATCT	1 cut(s)	323
BisI	GCNGC	8 cut(s)	180, 192, 195, 234, 652, 827, 2286, 2289
BlpI	GCTNAGC	3 cut(s)	74, 86, 229
BlsI	GCNGC	8 cut(s)	181, 193, 196, 235, 653, 828, 2287, 2290
Bme1390I	CCNGG	6 cut(s)	29, 107, 113, 910, 1071, 1727
Bme18I	GGWCC	3 cut(s)	109, 1263, 2194
BmgT120I	GGNCC	4 cut(s)	109, 118, 1263, 2194
BmiI	GGNNCC	4 cut(s)	26, 906, 1002, 1264
BmrFI	CCNGG	6 cut(s)	29, 107, 113, 910, 1071, 1727
BmsI	GCATC	6 cut(s)	99, 822, 1349, 1984, 2144, 2284
BplI	GAGNNNNNCTC	2 cut(s)	2033, 2065
BpmI	CTGGAG	2 cut(s)	156, 1053
Bpu10I	CCTNAGC	1 cut(s)	501
Bpu1102I	GCTNAGC	3 cut(s)	74, 86, 229
BpuEI	CTTGAG	1 cut(s)	473
BpuMI	CCSGG	1 cut(s)	107
Bsa29I	ATCGAT	2 cut(s)	1432, 1789
BsaAI	YACGTR	1 cut(s)	2282
BsaHI	GRCGYC	1 cut(s)	25
BsaI	GGTCTC	4 cut(s)	26, 179, 1649, 2016
BsaJI	CCNNGG	4 cut(s)	908, 1070, 1726, 1888
BsaXI	ACNNNNNCTCC	4 cut(s)	1189, 1219, 2233, 2263
Bsc4I	CCNNNNNNNGG	5 cut(s)	112, 472, 1990, 2207, 2208
Bse1I	ACTGG	3 cut(s)	778, 1736, 2263
Bse21I	CCTNAGG	1 cut(s)	1623
Bse3DI	GCAATG	2 cut(s)	1039, 2222
BseBI	CCWGG	5 cut(s)	29, 113, 910, 1071, 1727
BseCI	ATCGAT	2 cut(s)	1432, 1789
BseDI	CCNNGG	4 cut(s)	908, 1070, 1726, 1888
BseGI	GGATG	6 cut(s)	547, 803, 1393, 1535, 2050, 2159
BseLI	CCNNNNNNNGG	5 cut(s)	112, 472, 1990, 2207, 2208
BseMI	GCAATG	2 cut(s)	1039, 2222
BseMII	CTCAG	9 cut(s)	100, 276, 515, 596, 1167, 1614, 1680, 1937, 2310
BseNI	ACTGG	3 cut(s)	778, 1736, 2263
BseRI	GAGGAG	2 cut(s)	330, 1385
BseXI	GCAGC	5 cut(s)	178, 220, 638, 813, 2300
BseYI	CCCAGC	2 cut(s)	734, 1086
BshFI	GGCC	6 cut(s)	119, 179, 499, 1139, 1555, 1697
BshNI	GGYRCC	2 cut(s)	24, 1000
BshVI	ATCGAT	2 cut(s)	1432, 1789
BsiHKAI	GWGCWC	3 cut(s)	99, 976, 1807
BsiSI	CCGG	1 cut(s)	107
BslFI	GGGAC	3 cut(s)	431, 814, 1276
BslI	CCNNNNNNNGG	5 cut(s)	112, 472, 1990, 2207, 2208
BsmBI	CGTCTC	2 cut(s)	12, 281
BsmFI	GGGAC	3 cut(s)	431, 814, 1276
BsmI	GAATGC	1 cut(s)	385
BsnI	GGCC	6 cut(s)	119, 179, 499, 1139, 1555, 1697
Bso31I	GGTCTC	4 cut(s)	26, 179, 1649, 2016
Bsp1286I	GDGCHC	5 cut(s)	87, 99, 909, 976, 1807
Bsp1407I	TGTACA	2 cut(s)	303, 1286
Bsp143I	GATC	9 cut(s)	323, 402, 412, 859, 979, 1006, 1786, 2164, 2276
Bsp1720I	GCTNAGC	3 cut(s)	74, 86, 229
BspACI	CCGC	6 cut(s)	180, 189, 195, 383, 586, 2286
BspANI	GGCC	6 cut(s)	119, 179, 499, 1139, 1555, 1697
BspCNI	CTCAG	9 cut(s)	99, 277, 514, 595, 1166, 1615, 1681, 1938, 2311
BspDI	ATCGAT	2 cut(s)	1432, 1789
BspHI	TCATGA	2 cut(s)	372, 1014
BspLI	GGNNCC	4 cut(s)	26, 906, 1002, 1264
BspQI	GCTCTTC	2 cut(s)	1098, 1812
BspT107I	GGYRCC	2 cut(s)	24, 1000
BspTNI	GGTCTC	4 cut(s)	26, 179, 1649, 2016
BsrDI	GCAATG	2 cut(s)	1039, 2222
BsrGI	TGTACA	2 cut(s)	303, 1286
BsrI	ACTGG	3 cut(s)	778, 1736, 2263
BssECI	CCNNGG	4 cut(s)	908, 1070, 1726, 1888
BssMI	GATC	9 cut(s)	323, 402, 412, 859, 979, 1006, 1786, 2164, 2276
BssNI	GRCGYC	1 cut(s)	25
BssSI	CACGAG	1 cut(s)	975
BssT1I	CCWWGG	1 cut(s)	1888
Bst2BI	CACGAG	1 cut(s)	975
Bst2UI	CCWGG	5 cut(s)	29, 113, 910, 1071, 1727
Bst4CI	ACNGT	8 cut(s)	37, 292, 398, 1167, 1480, 1934, 2104, 2311
Bst6I	CTCTTC	4 cut(s)	8, 957, 1098, 1812
BstACI	GRCGYC	1 cut(s)	25
BstAPI	GCANNNNNTGC	2 cut(s)	1346, 2294
BstAUI	TGTACA	2 cut(s)	303, 1286
BstBAI	YACGTR	1 cut(s)	2282
BstC8I	GCNNGC	5 cut(s)	61, 164, 226, 915, 1407
BstENI	CCTNNNNNAGG	1 cut(s)	470
BstF5I	GGATG	6 cut(s)	547, 803, 1393, 1535, 2050, 2159
BstH2I	RGCGCY	1 cut(s)	28
BstHHI	GCGC	2 cut(s)	27, 134
BstKTI	GATC	9 cut(s)	326, 405, 415, 862, 982, 1009, 1789, 2167, 2279
BstMBI	GATC	9 cut(s)	323, 402, 412, 859, 979, 1006, 1786, 2164, 2276
BstMWI	GCNNNNNNNGC	7 cut(s)	188, 203, 230, 687, 1346, 1679, 2294
BstNI	CCWGG	5 cut(s)	29, 113, 910, 1071, 1727
BstNSI	RCATGY	5 cut(s)	917, 1216, 1233, 1609, 1768
BstSCI	CCNGG	6 cut(s)	27, 105, 111, 908, 1069, 1725
BstSFI	CTRYAG	1 cut(s)	1930
BstV1I	GCAGC	5 cut(s)	178, 220, 638, 813, 2300
BstX2I	RGATCY	1 cut(s)	323
BstXI	CCANNNNNNTGG	2 cut(s)	1767, 1889
BstYI	RGATCY	1 cut(s)	323
Bsu15I	ATCGAT	2 cut(s)	1432, 1789
Bsu36I	CCTNAGG	1 cut(s)	1623
BsuI	GTATCC	1 cut(s)	1219
BsuRI	GGCC	6 cut(s)	119, 179, 499, 1139, 1555, 1697
BsuTUI	ATCGAT	2 cut(s)	1432, 1789
BtsCI	GGATG	6 cut(s)	547, 803, 1393, 1535, 2050, 2159
BtsI	GCAGTG	2 cut(s)	97, 1844
BtsIMutI	CAGTG	5 cut(s)	97, 403, 771, 1476, 1844
Cac8I	GCNNGC	5 cut(s)	61, 164, 226, 915, 1407
CaiI	CAGNNNCTG	2 cut(s)	1165, 1322
CciI	TCATGA	2 cut(s)	372, 1014
CfoI	GCGC	2 cut(s)	27, 134
Cfr13I	GGNCC	4 cut(s)	109, 118, 1263, 2194
ClaI	ATCGAT	2 cut(s)	1432, 1789
CseI	GACGC	1 cut(s)	1860
Csp6I	GTAC	4 cut(s)	304, 898, 1287, 2266
CspCI	CAANNNNNGTGG	2 cut(s)	2328, 2363
CviQI	GTAC	4 cut(s)	304, 898, 1287, 2266
DinI	GGCGCC	1 cut(s)	26
DpnI	GATC	9 cut(s)	325, 404, 414, 861, 981, 1008, 1788, 2166, 2278
DpnII	GATC	9 cut(s)	323, 402, 412, 859, 979, 1006, 1786, 2164, 2276
EaeI	YGGCCR	1 cut(s)	177
Eam1104I	CTCTTC	4 cut(s)	8, 957, 1098, 1812
EarI	CTCTTC	4 cut(s)	8, 957, 1098, 1812
Ecl136II	GAGCTC	1 cut(s)	974
Eco130I	CCWWGG	1 cut(s)	1888
Eco147I	AGGCCT	1 cut(s)	499
Eco24I	GRGCYC	3 cut(s)	87, 909, 976
Eco31I	GGTCTC	4 cut(s)	26, 179, 1649, 2016
Eco32I	GATATC	1 cut(s)	1821
Eco47I	GGWCC	3 cut(s)	109, 1263, 2194
Eco53kI	GAGCTC	1 cut(s)	974
Eco57I	CTGAAG	1 cut(s)	1767
Eco72I	CACGTG	1 cut(s)	2282
Eco81I	CCTNAGG	1 cut(s)	1623
EcoICRI	GAGCTC	1 cut(s)	974
EcoNI	CCTNNNNNAGG	1 cut(s)	470
EcoRI	GAATTC	1 cut(s)	1749
EcoRII	CCWGG	5 cut(s)	27, 111, 908, 1069, 1725
EcoRV	GATATC	1 cut(s)	1821
EcoT14I	CCWWGG	1 cut(s)	1888
EcoT22I	ATGCAT	1 cut(s)	668
EcoT38I	GRGCYC	3 cut(s)	87, 909, 976
EgeI	GGCGCC	1 cut(s)	26
EheI	GGCGCC	1 cut(s)	26
ErhI	CCWWGG	1 cut(s)	1888
Esp3I	CGTCTC	2 cut(s)	12, 281
FaqI	GGGAC	3 cut(s)	431, 814, 1276
FauNDI	CATATG	3 cut(s)	507, 1714, 2190
FbaI	TGATCA	1 cut(s)	859
FblI	GTMKAC	1 cut(s)	141
Fnu4HI	GCNGC	8 cut(s)	180, 192, 195, 234, 652, 827, 2286, 2289
FokI	GGATG	6 cut(s)	554, 790, 1380, 1522, 2057, 2166
FriOI	GRGCYC	3 cut(s)	87, 909, 976
Fsp4HI	GCNGC	8 cut(s)	180, 192, 195, 234, 652, 827, 2286, 2289
FspBI	CTAG	3 cut(s)	159, 1308, 1878
GlaI	GCGC	2 cut(s)	26, 133
GluI	GCNGC	8 cut(s)	180, 192, 195, 234, 652, 827, 2286, 2289
GsaI	CCCAGC	2 cut(s)	738, 1090
GsuI	CTGGAG	2 cut(s)	156, 1053
HaeII	RGCGCY	1 cut(s)	28
HaeIII	GGCC	6 cut(s)	119, 179, 499, 1139, 1555, 1697
HapII	CCGG	1 cut(s)	107
HgaI	GACGC	1 cut(s)	1860
HhaI	GCGC	2 cut(s)	27, 134
Hin1I	GRCGYC	1 cut(s)	25
Hin6I	GCGC	2 cut(s)	25, 132
HinP1I	GCGC	2 cut(s)	25, 132
HincII	GTYRAC	2 cut(s)	1875, 2134
HindII	GTYRAC	2 cut(s)	1875, 2134
HindIII	AAGCTT	4 cut(s)	71, 1403, 1680, 2213
HpaII	CCGG	1 cut(s)	107
HphI	GGTGA	5 cut(s)	22, 1103, 1611, 1964, 1978
Hpy166II	GTNNAC	9 cut(s)	142, 594, 757, 898, 1287, 1483, 1875, 1969, 2134
Hpy188I	TCNGA	9 cut(s)	286, 345, 1690, 1786, 1838, 1947, 2058, 2169, 2276
Hpy8I	GTNNAC	9 cut(s)	142, 594, 757, 898, 1287, 1483, 1875, 1969, 2134
HpyAV	CCTTC	7 cut(s)	118, 478, 680, 700, 1600, 1700, 1791
HpyCH4III	ACNGT	8 cut(s)	37, 292, 398, 1167, 1480, 1934, 2104, 2311
HpyCH4IV	ACGT	1 cut(s)	2281
HpyCH4V	TGCA	7 cut(s)	666, 1233, 1332, 1469, 1529, 2227, 2297
HpyF10VI	GCNNNNNNNGC	7 cut(s)	188, 203, 230, 687, 1346, 1679, 2294
HpySE526I	ACGT	1 cut(s)	2281
Hsp92I	GRCGYC	1 cut(s)	25
HspAI	GCGC	2 cut(s)	25, 132
KasI	GGCGCC	1 cut(s)	24
Ksp22I	TGATCA	1 cut(s)	859
Kzo9I	GATC	9 cut(s)	323, 402, 412, 859, 979, 1006, 1786, 2164, 2276
LguI	GCTCTTC	2 cut(s)	1098, 1812
LmnI	GCTCC	1 cut(s)	904
Lsp1109I	GCAGC	5 cut(s)	178, 220, 638, 813, 2300
LweI	GCATC	6 cut(s)	99, 822, 1349, 1984, 2144, 2284
MaeI	CTAG	3 cut(s)	159, 1308, 1878
MaeII	ACGT	1 cut(s)	2281
MaeIII	GTNAC	4 cut(s)	151, 1389, 1462, 1474
MalI	GATC	9 cut(s)	325, 404, 414, 861, 981, 1008, 1788, 2166, 2278
MboI	GATC	9 cut(s)	323, 402, 412, 859, 979, 1006, 1786, 2164, 2276
MboII	GAAGA	9 cut(s)	25, 79, 388, 974, 1115, 1677, 1745, 1799, 1970
MfeI	CAATTG	4 cut(s)	641, 1344, 1470, 1557
MflI	RGATCY	1 cut(s)	323
MhlI	GDGCHC	5 cut(s)	87, 99, 909, 976, 1807
Mly113I	GGCGCC	1 cut(s)	25
MlyI	GAGTC	6 cut(s)	147, 442, 1073, 1397, 2179, 2332
MmeI	TCCRAC	2 cut(s)	508, 1337
Mph1103I	ATGCAT	1 cut(s)	668
MslI	CAYNNNNRTG	5 cut(s)	315, 540, 821, 2189, 2232
MspA1I	CMGCKG	4 cut(s)	191, 586, 734, 2291
MspI	CCGG	1 cut(s)	107
MspR9I	CCNGG	6 cut(s)	29, 107, 113, 910, 1071, 1727
MunI	CAATTG	4 cut(s)	641, 1344, 1470, 1557
Mva1269I	GAATGC	1 cut(s)	385
MvaI	CCWGG	5 cut(s)	29, 113, 910, 1071, 1727
MwoI	GCNNNNNNNGC	7 cut(s)	188, 203, 230, 687, 1346, 1679, 2294
NarI	GGCGCC	1 cut(s)	25
NciI	CCSGG	1 cut(s)	107
NdeI	CATATG	3 cut(s)	507, 1714, 2190
NdeII	GATC	9 cut(s)	323, 402, 412, 859, 979, 1006, 1786, 2164, 2276
NlaIV	GGNNCC	4 cut(s)	26, 906, 1002, 1264
NmeAIII	GCCGAG	1 cut(s)	208
NmuCI	GTSAC	2 cut(s)	1389, 1474
NsiI	ATGCAT	1 cut(s)	668
NspI	RCATGY	5 cut(s)	917, 1216, 1233, 1609, 1768
PaeI	GCATGC	1 cut(s)	917
PagI	TCATGA	2 cut(s)	372, 1014
PceI	AGGCCT	1 cut(s)	499
PciI	ACATGT	1 cut(s)	1764
PciSI	GCTCTTC	2 cut(s)	1098, 1812
PcsI	WCGNNNNNNNCGW	1 cut(s)	99
PctI	GAATGC	1 cut(s)	385
PfeI	GAWTC	5 cut(s)	335, 551, 1570, 1616, 1833
PflFI	GACNNNGTC	2 cut(s)	107, 2247
PflMI	CCANNNNNTGG	1 cut(s)	1990
PkrI	GCNGC	8 cut(s)	181, 193, 196, 235, 653, 828, 2287, 2290
PleI	GAGTC	6 cut(s)	146, 442, 1072, 1396, 2178, 2331
PluTI	GGCGCC	1 cut(s)	28
PmaCI	CACGTG	1 cut(s)	2282
PmlI	CACGTG	1 cut(s)	2282
PpsI	GAGTC	6 cut(s)	146, 442, 1072, 1396, 2178, 2331
Ppu21I	YACGTR	1 cut(s)	2282
PscI	ACATGT	1 cut(s)	1764
Psp124BI	GAGCTC	1 cut(s)	976
Psp6I	CCWGG	5 cut(s)	27, 111, 908, 1069, 1725
PspCI	CACGTG	1 cut(s)	2282
PspFI	CCCAGC	2 cut(s)	734, 1086
PspGI	CCWGG	5 cut(s)	27, 111, 908, 1069, 1725
PspN4I	GGNNCC	4 cut(s)	26, 906, 1002, 1264
PspPI	GGNCC	4 cut(s)	109, 118, 1263, 2194
PstNI	CAGNNNCTG	2 cut(s)	1165, 1322
PsuI	RGATCY	1 cut(s)	323
PsyI	GACNNNGTC	2 cut(s)	107, 2247
PvuII	CAGCTG	2 cut(s)	734, 2291
RsaI	GTAC	4 cut(s)	305, 899, 1288, 2267
RsaNI	GTAC	4 cut(s)	304, 898, 1287, 2266
RseI	CAYNNNNRTG	5 cut(s)	315, 540, 821, 2189, 2232
SacI	GAGCTC	1 cut(s)	976
SapI	GCTCTTC	2 cut(s)	1098, 1812
SatI	GCNGC	8 cut(s)	180, 192, 195, 234, 652, 827, 2286, 2289
Sau3AI	GATC	9 cut(s)	323, 402, 412, 859, 979, 1006, 1786, 2164, 2276
Sau96I	GGNCC	4 cut(s)	109, 118, 1263, 2194
SchI	GAGTC	6 cut(s)	147, 442, 1073, 1397, 2179, 2332
ScrFI	CCNGG	6 cut(s)	29, 107, 113, 910, 1071, 1727
SduI	GDGCHC	5 cut(s)	87, 99, 909, 976, 1807
SfaNI	GCATC	6 cut(s)	99, 822, 1349, 1984, 2144, 2284
SfcI	CTRYAG	1 cut(s)	1930
SfoI	GGCGCC	1 cut(s)	26
SinI	GGWCC	3 cut(s)	109, 1263, 2194
SmiMI	CAYNNNNRTG	5 cut(s)	315, 540, 821, 2189, 2232
SmlI	CTYRAG	1 cut(s)	452
SmoI	CTYRAG	1 cut(s)	452
SpeI	ACTAGT	1 cut(s)	1307
SphI	GCATGC	1 cut(s)	917
SseBI	AGGCCT	1 cut(s)	499
SsiI	CCGC	6 cut(s)	180, 189, 195, 383, 586, 2286
SspDI	GGCGCC	1 cut(s)	24
SspMI	CTAG	3 cut(s)	159, 1308, 1878
SstI	GAGCTC	1 cut(s)	976
StuI	AGGCCT	1 cut(s)	499
StyD4I	CCNGG	6 cut(s)	27, 105, 111, 908, 1069, 1725
StyI	CCWWGG	1 cut(s)	1888
TaaI	ACNGT	8 cut(s)	37, 292, 398, 1167, 1480, 1934, 2104, 2311
TaiI	ACGT	1 cut(s)	2284
TaqI	TCGA	5 cut(s)	45, 93, 1432, 1789, 2352
TatI	WGTACW	4 cut(s)	303, 897, 1286, 2265
TauI	GCSGC	3 cut(s)	182, 197, 2288
TfiI	GAWTC	5 cut(s)	335, 551, 1570, 1616, 1833
TscAI	CASTG	5 cut(s)	104, 403, 778, 1483, 1851
TseFI	GTSAC	2 cut(s)	1389, 1474
TseI	GCWGC	5 cut(s)	191, 233, 651, 826, 2288
Tsp45I	GTSAC	2 cut(s)	1389, 1474
TspRI	CASTG	5 cut(s)	104, 403, 778, 1483, 1851
Tth111I	GACNNNGTC	2 cut(s)	107, 2247
Van91I	CCANNNNNTGG	1 cut(s)	1990
VpaK11BI	GGWCC	3 cut(s)	109, 1263, 2194
XagI	CCTNNNNNAGG	1 cut(s)	470
XapI	RAATTY	5 cut(s)	1097, 1749, 1840, 1955, 2303
XceI	RCATGY	5 cut(s)	917, 1216, 1233, 1609, 1768
XmiI	GTMKAC	1 cut(s)	141
XspI	CTAG	3 cut(s)	159, 1308, 1878
Zsp2I	ATGCAT	1 cut(s)	668

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.