Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0001748

Physical Location & Seq

Genomic Coordinates Reverse (-)

38354317 .. 38359204

Gene Structure 4888 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1339400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2430 bp

ATGTACGTGGTTAAGAGAGATGGGCGGCAGGAAACCGTGCATTTCGACAAGATTACGGCACGCTTGAAGAAGCTCAGCTATGGCCTTAGCACCGACCACTGCGACCCCGTGCTAGTGGCCCAGAAGGTCTGCGCTGGGGTCTACAAGGGCGTCACCACCAGCCAGCTTGATGAATTGGCCGCCGAGACTGCCGCTGCTATGACCGCCAACCACCCTGACTACGCCTGCTTGGCCGCCAGAATTGTAGTCTCAAATCTACACAAGAACACTATGAAATCGTTTTCAGAGACGATCAAAATGATGCACAACCATGTGAGTGAGAGATCTGGGCTGAAAGCCCCTCTGATAGCTGACGATGTTTATGAAATCATCATGAAGAATGCGGCTTGTCTGGATAGTGAGATCATTTATGATCGGGACTTTGACTATGATTACTTTGGCTTCAAGACTCTTGAGAGGTCTTACCTCTTAAAGGTTCAAGGCAAAGTTGTGGAAAGACCTCAACACATGCTAATGAGGGTTTCTGTTGGGATTCACAAGGATGATATCGATTCTGTTATCAAGACATATCACCTGATGTCTCAGCGGTGGTTCACTCATGCTTCTCCCACCCTCTTCAATTCTGGAACTCCAAGGCCTCAGTTGAGCAGCTGCTTCCTTGTTTGCATGAAAGATGATAGCATTGAAGGCATTTATGATACCTTGAAAGAATGTGCTGTTATCAGCAAGTCAGCTGGAGGAATTGGTGTCTCAGTTCATAACATCCGTGCCACAGGCAGTTATATTCGTGGAACAAATGGAACCTCCAATGGCATTGTTCCAATGTTGAGAGTTTTTAATGATACGGCCCGTTATGTTGATCAAGGAGGAGGCAAGAGGAAAGGTGCCTTTGCTGTGTACTTGGAACCCTGGCATGCTGATGTATTTGAATTTCTTGATTTAAGAAAAAACCATGGAAAGGAAGAACATCGAGCCCGTGATCTTTTTTATGCACTTTGGGTGCCTGATCTCTTCATGGAAAGAGTTCAAAAAGATGGCAGTTGGTCATTGTTTTGTCCTAATGAGTCTCCAGGTTTGTCAGATTGCTGGGGTGAAAAATTTGAACAGCTGTACACCCGATATGAAAGAGAGGGGAAAGCCAAAAAGGTTGTACAGGCACAGCAACTTTGGTTTGAAATTCTTAAATCACAGATAGAAACTGGAACACCCTATATGCTTTTTAAGGATACTTGCAATAGTAAGAGTAATCAGCAAAATCTGGGAACCATAAAATCCTCAAACTTGTGTACCGAGATAATTGAGTATACAAGTCCAACAGAAACTGCTGTATGCAATCTGGCATCAATTGCACTACCGCGATATGTGAGGGAGAAGGGACTCCCTGTGGAGTCGCATCCATCTAAGCTTGTTGGCAGCAGAGGTTCCAAAAATAGATATTTTGACTTTGACAAACTAGCAGAGGTAACTGCAATTGTCACTGCAAACCTCAACAAGATAATTGATGTCAATTACTATCCTGTTGATAGTGCAAAGACATCAAATTTGCGACATAGACCAATTGGAATTGGGGTTCAAGGTCTTGCTGATACCTTCATTTTGCTTGGCATGGCCTTTGATTCACCTGAGGCTCAACAACTGAACAAGGACATATTTGAGACCATATATTACCATGCTCTCAAGGAGTCTTCCAAGTTAGCAGCAAAAGAAGGCCCTTATGAAACATATAGTGGCAGTCCTGTGAGCAAGGGAATTGTTCAGCCAGACATGTGGGGTGTGACACCTTCAGATCGGTGGGATTGGGGTGCTCTTCGGCAGATGATATCAATGAATGGAGTCAGAAATTCTCTTCTTGTAGCCCCAATGCCTACTGCTTCAACTAGCCAAATTTTGGGGAACAATGAGTGTTTTGAGCCTTATACTTCGAATATCTACAGTCGCAGGGTTTTGAGTGGCGAGTTTGTTGTGGTGAATAAACATCTTCTTCATGACTTAACTGAGATGGGTCTTTGGTCTCCTGCAATTAAGAATAATATCATCTATGAGGATGGCTCGGTTCAGAAAATTCCCGAAATCCCTGATGATCTGAAAGTCATTTACAGAACTGTTTGGGAGATCAAGCAAAGGACTTTGGTTGACATGGCTGTCGATAGGGGATGTTACATAGACCAGAGTCAAAGTCTTAATATACATATGGACCAACCCAATTTTGGGAAGCTTACTTCATTGCACTTCTATGCTTGGACAAAGGGTCTGAAAACAGGGATGTATTATCTGCGGTCTCGTGCAGCAGCTGACGCCATCAAGTTTACTGTTGATACTACAATTCTCAAAGAAAAGCCAGAGGTAGCAGAAGATGATGTTGGTACACAAAAGGCACAGATGGTATGCTCTCTGACAAACCGGGAAGACTGCATGTCCTGCGGAAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004748 GO:0006139 GO:0006259 GO:0006260 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009117 GO:0009141 GO:0009142 GO:0009165 GO:0009200 GO:0009202 GO:0009262 GO:0009263 GO:0009987 GO:0010035 GO:0010038 GO:0016491 GO:0016725 GO:0016728 GO:0018130 GO:0019438 GO:0019637 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044281 GO:0046483 GO:0046686 GO:0050896 GO:0055086 GO:0055114 GO:0061731 GO:0071704 GO:0090304 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko00480 ko00983 ko01100 map00230 map00240 map00480 map00983 map01100

Pfam Domains

Protein Families

ATP-cone Ribonuc_red_lgC Ribonuc_red_lgN

Protein Analysis

810

Amino Acids

91.04

Weight (kDa)

6.87

Isoelectric Point (pI)

43.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ATP-cone	PF03477	1 - 88	3.4e-14	ATP cone domain
Ribonuc_red_lgN	PF00317	142 - 212	9.8e-24	Ribonucleotide reductase, all-alpha domain
Ribonuc_red_lgC	PF02867	216 - 757	9.8e-218	Ribonucleotide reductase, barrel domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001748)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21790
fragaria_vesca	FvH4_1g23970 FvH4_1g23970
malus_domestica	MD01G1010100.v1.1 MD15G1339400.v1.1
prunus_persica	Prupe.6G159900_v2.0.a1 Prupe.8G037800_v2.0.a1 Prupe.8G037800_v2.0.a1 Prupe.8G037800_v2.0.a1 Prupe.8G037800_v2.0.a1
pyrus_communis	pycom01g03750 pycom15g29920
rosa_chinensis	RchiOBHm_Chr1g0314231 RchiOBHm_Chr2g0120091 RchiOBHm_Chr4g0385701
rosa_laevigata	RLG00000015777 RLG00000018519
rosa_multiflora	Rmu_co8237057.1_g000001 Rmu_co8263959.1_g000001 Rmu_sc0000073.1_g000009 Rmu_sc0002754.1_g000003 Rmu_sc0007442.1_g000001 Rmu_sc0013299.1_g000004 Rmu_sc0026829.1_g000001 Rmu_sc0032207.1_g000001
rosa_roxburghii	Rroxscaffold_2G00093370 Rroxscaffold_2G00093380 Rroxscaffold_2G00123740
rosa_rugosa	Rorug02G0226700 Rorug02G0450900 Rorug05G0560100 Rorug06G0079200
rosa_samantha	Rh2AG283200 Rh2BG020700 Rh2BG294500 Rh2CG020400 Rh2CG021300 Rh2CG021400 Rh2CG021500 Rh2CG337900 Rh2DG021000 Rh2DG021100 Rh2DG021200 Rh2DG308200 Rh2DG687900 Rh5BG469900 Rh6AG111200
rosa_wichuraiana	Rw2G022680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2141
AccB1I	GGYRCC	2 cut(s)	884, 1000
AccB7I	CCANNNNNTGG	1 cut(s)	1888
AccI	GTMKAC	2 cut(s)	141, 1304
AccII	CGCG	1 cut(s)	1357
AcoI	YGGCCR	2 cut(s)	177, 231
AcsI	RAATTY	7 cut(s)	929, 1097, 1176, 1540, 1840, 1884, 2061
AcuI	CTGAAG	1 cut(s)	1767
AcyI	GRCGYC	2 cut(s)	150, 2295
AfaI	GTAC	6 cut(s)	5, 899, 1112, 1152, 1288, 2365
AfiI	CCNNNNNNNGG	5 cut(s)	472, 958, 1888, 2207, 2208
AflIII	ACRYGT	1 cut(s)	1764
AhdI	GACNNNNNGTC	2 cut(s)	2247, 2413
AjnI	CCWGG	2 cut(s)	908, 1069
AjuI	GAANNNNNNNTTGG	2 cut(s)	2343, 2375
AloI	GAACNNNNNNTCC	2 cut(s)	1554, 1586
Alw21I	GWGCWC	1 cut(s)	1807
Alw26I	GTCTC	9 cut(s)	179, 253, 281, 585, 754, 1071, 1649, 2016, 2283
AlwNI	CAGNNNCTG	2 cut(s)	1322, 2291
AoxI	GGCC	8 cut(s)	82, 117, 177, 231, 635, 846, 1608, 1708
ApeKI	GCWGC	7 cut(s)	194, 648, 651, 1413, 1697, 2285, 2288
ApoI	RAATTY	7 cut(s)	929, 1097, 1176, 1540, 1840, 1884, 2061
ArsI	GACNNNNNNTTYG	2 cut(s)	1525, 1557
Asp700I	GAANNNNTTC	1 cut(s)	1023
AspLEI	GCGC	1 cut(s)	134
AspS9I	GGNCC	4 cut(s)	118, 847, 1709, 2194
AsuC2I	CCSGG	1 cut(s)	2402
AsuHPI	GGTGA	5 cut(s)	145, 563, 1103, 1611, 1978
AsuII	TTCGAA	1 cut(s)	1922
AvaII	GGWCC	1 cut(s)	2194
AxyI	CCTNAGG	1 cut(s)	1623
BaeI	ACNNNNGTAYC	2 cut(s)	1270, 1303
BanI	GGYRCC	2 cut(s)	884, 1000
BanII	GRGCYC	1 cut(s)	976
BauI	CACGAG	1 cut(s)	2280
BbsI	GAAGAC	2 cut(s)	1677, 2412
Bbv12I	GWGCWC	1 cut(s)	1807
BbvI	GCAGC	7 cut(s)	181, 638, 660, 1425, 1709, 2297, 2300
BccI	CCATC	7 cut(s)	14, 1028, 1405, 1993, 2039, 2306, 2374
BceAI	ACGGC	2 cut(s)	72, 861
BciT130I	CCWGG	2 cut(s)	910, 1071
BciVI	GTATCC	1 cut(s)	1219
BclI	TGATCA	1 cut(s)	859
BcnI	CCSGG	1 cut(s)	2402
BcoDI	GTCTC	9 cut(s)	179, 253, 281, 585, 754, 1071, 1649, 2016, 2283
BfaI	CTAG	3 cut(s)	113, 1454, 1878
BfmI	CTRYAG	1 cut(s)	1930
BfuI	GTATCC	1 cut(s)	1219
BglI	GCCNNNNNGGC	1 cut(s)	230
BglII	AGATCT	1 cut(s)	323
BlpI	GCTNAGC	1 cut(s)	74
Bme1390I	CCNGG	3 cut(s)	910, 1071, 2402
Bme18I	GGWCC	1 cut(s)	2194
BmeRI	GACNNNNNGTC	2 cut(s)	2247, 2413
BmgT120I	GGNCC	4 cut(s)	118, 847, 1709, 2194
BmiI	GGNNCC	6 cut(s)	802, 886, 906, 1002, 1264, 1423
BmrFI	CCNGG	3 cut(s)	910, 1071, 2402
BmsI	GCATC	3 cut(s)	291, 1349, 1402
BoxI	GACNNNNGTC	1 cut(s)	2169
BpiI	GAAGAC	2 cut(s)	1677, 2412
BplI	GAGNNNNNCTC	2 cut(s)	2033, 2065
BpmI	CTGGAG	2 cut(s)	756, 1053
Bpu10I	CCTNAGC	1 cut(s)	86
Bpu1102I	GCTNAGC	1 cut(s)	74
Bpu14I	TTCGAA	1 cut(s)	1922
BpuEI	CTTGAG	2 cut(s)	473, 1661
BpuMI	CCSGG	1 cut(s)	2402
Bsa29I	ATCGAT	1 cut(s)	549
BsaAI	YACGTR	1 cut(s)	7
BsaHI	GRCGYC	2 cut(s)	150, 2295
BsaI	GGTCTC	3 cut(s)	1649, 2016, 2283
BsaJI	CCNNGG	3 cut(s)	632, 908, 952
Bsc4I	CCNNNNNNNGG	5 cut(s)	472, 958, 1888, 2207, 2208
Bse1I	ACTGG	1 cut(s)	1204
Bse21I	CCTNAGG	1 cut(s)	1623
Bse3DI	GCAATG	1 cut(s)	2222
BseBI	CCWGG	2 cut(s)	910, 1071
BseCI	ATCGAT	1 cut(s)	549
BseDI	CCNNGG	3 cut(s)	632, 908, 952
BseGI	GGATG	6 cut(s)	547, 762, 1393, 2050, 2159, 2268
BseLI	CCNNNNNNNGG	5 cut(s)	472, 958, 1888, 2207, 2208
BseMI	GCAATG	1 cut(s)	2222
BseMII	CTCAG	6 cut(s)	88, 596, 653, 765, 1614, 1986
BseNI	ACTGG	1 cut(s)	1204
BseRI	GAGGAG	1 cut(s)	882
BseXI	GCAGC	7 cut(s)	181, 638, 660, 1425, 1709, 2297, 2300
BseYI	CCCAGC	2 cut(s)	134, 1086
BsgI	GTGCAG	1 cut(s)	2304
Bsh1236I	CGCG	1 cut(s)	1357
BshFI	GGCC	8 cut(s)	84, 119, 179, 233, 637, 848, 1610, 1710
BshNI	GGYRCC	2 cut(s)	884, 1000
BshVI	ATCGAT	1 cut(s)	549
BsiHKAI	GWGCWC	1 cut(s)	1807
BsiSI	CCGG	1 cut(s)	2401
BslFI	GGGAC	2 cut(s)	431, 1389
BslI	CCNNNNNNNGG	5 cut(s)	472, 958, 1888, 2207, 2208
BsmAI	GTCTC	9 cut(s)	179, 253, 281, 585, 754, 1071, 1649, 2016, 2283
BsmBI	CGTCTC	1 cut(s)	281
BsmFI	GGGAC	2 cut(s)	431, 1389
BsmI	GAATGC	1 cut(s)	385
BsnI	GGCC	8 cut(s)	84, 119, 179, 233, 637, 848, 1610, 1710
Bso31I	GGTCTC	3 cut(s)	1649, 2016, 2283
Bsp119I	TTCGAA	1 cut(s)	1922
Bsp1286I	GDGCHC	2 cut(s)	976, 1807
Bsp1407I	TGTACA	2 cut(s)	1110, 1150
Bsp1720I	GCTNAGC	1 cut(s)	74
Bsp19I	CCATGG	1 cut(s)	952
BspANI	GGCC	8 cut(s)	84, 119, 179, 233, 637, 848, 1610, 1710
BspCNI	CTCAG	6 cut(s)	87, 595, 652, 764, 1615, 1987
BspDI	ATCGAT	1 cut(s)	549
BspFNI	CGCG	1 cut(s)	1357
BspHI	TCATGA	2 cut(s)	372, 1984
BspLI	GGNNCC	6 cut(s)	802, 886, 906, 1002, 1264, 1423
BspQI	GCTCTTC	1 cut(s)	1812
BspT104I	TTCGAA	1 cut(s)	1922
BspT107I	GGYRCC	2 cut(s)	884, 1000
BspTNI	GGTCTC	3 cut(s)	1649, 2016, 2283
BsrDI	GCAATG	1 cut(s)	2222
BsrGI	TGTACA	2 cut(s)	1110, 1150
BsrI	ACTGG	1 cut(s)	1204
BssECI	CCNNGG	3 cut(s)	632, 908, 952
BssNAI	GTATAC	1 cut(s)	1305
BssNI	GRCGYC	2 cut(s)	150, 2295
BssSI	CACGAG	1 cut(s)	2280
BssT1I	CCWWGG	2 cut(s)	632, 952
Bst1107I	GTATAC	1 cut(s)	1305
Bst2BI	CACGAG	1 cut(s)	2280
Bst2UI	CCWGG	2 cut(s)	910, 1071
Bst4CI	ACNGT	4 cut(s)	37, 1934, 2104, 2311
Bst6I	CTCTTC	4 cut(s)	620, 1016, 1812, 1851
BstACI	GRCGYC	2 cut(s)	150, 2295
BstAPI	GCANNNNNTGC	2 cut(s)	1346, 2418
BstAUI	TGTACA	2 cut(s)	1110, 1150
BstBAI	YACGTR	1 cut(s)	7
BstBI	TTCGAA	1 cut(s)	1922
BstC8I	GCNNGC	4 cut(s)	61, 164, 226, 915
BstDEI	CTNAG	8 cut(s)	74, 86, 582, 639, 751, 1401, 1623, 1995
BstDSI	CCRYGG	1 cut(s)	952
BstENI	CCTNNNNNAGG	1 cut(s)	470
BstF5I	GGATG	6 cut(s)	547, 762, 1393, 2050, 2159, 2268
BstFNI	CGCG	1 cut(s)	1357
BstHHI	GCGC	1 cut(s)	134
BstMAI	GTCTC	9 cut(s)	179, 253, 281, 585, 754, 1071, 1649, 2016, 2283
BstMWI	GCNNNNNNNGC	7 cut(s)	188, 203, 230, 687, 1346, 2294, 2418
BstNI	CCWGG	2 cut(s)	910, 1071
BstNSI	RCATGY	4 cut(s)	511, 917, 1768, 2416
BstPAI	GACNNNNGTC	1 cut(s)	2169
BstSCI	CCNGG	3 cut(s)	908, 1069, 2400
BstSFI	CTRYAG	1 cut(s)	1930
BstUI	CGCG	1 cut(s)	1357
BstV1I	GCAGC	7 cut(s)	181, 638, 660, 1425, 1709, 2297, 2300
BstV2I	GAAGAC	2 cut(s)	1677, 2412
BstX2I	RGATCY	1 cut(s)	323
BstXI	CCANNNNNNTGG	1 cut(s)	1767
BstYI	RGATCY	1 cut(s)	323
BstZ17I	GTATAC	1 cut(s)	1305
Bsu15I	ATCGAT	1 cut(s)	549
Bsu36I	CCTNAGG	1 cut(s)	1623
BsuI	GTATCC	1 cut(s)	1219
BsuRI	GGCC	8 cut(s)	84, 119, 179, 233, 637, 848, 1610, 1710
BsuTUI	ATCGAT	1 cut(s)	549
BtgI	CCRYGG	1 cut(s)	952
BtsCI	GGATG	6 cut(s)	547, 762, 1393, 2050, 2159, 2268
BtsI	GCAGTG	2 cut(s)	97, 1476
BtsIMutI	CAGTG	2 cut(s)	97, 1476
Cac8I	GCNNGC	4 cut(s)	61, 164, 226, 915
CaiI	CAGNNNCTG	2 cut(s)	1322, 2291
CciI	TCATGA	2 cut(s)	372, 1984
CfoI	GCGC	1 cut(s)	134
Cfr13I	GGNCC	4 cut(s)	118, 847, 1709, 2194
ClaI	ATCGAT	1 cut(s)	549
CseI	GACGC	2 cut(s)	139, 2303
Csp6I	GTAC	6 cut(s)	4, 898, 1111, 1151, 1287, 2364
CviQI	GTAC	6 cut(s)	4, 898, 1111, 1151, 1287, 2364
DdeI	CTNAG	8 cut(s)	74, 86, 582, 639, 751, 1401, 1623, 1995
DrdI	GACNNNNNNGTC	1 cut(s)	2141
DriI	GACNNNNNGTC	2 cut(s)	2247, 2413
DseDI	GACNNNNNNGTC	1 cut(s)	2141
EaeI	YGGCCR	2 cut(s)	177, 231
Eam1104I	CTCTTC	4 cut(s)	620, 1016, 1812, 1851
Eam1105I	GACNNNNNGTC	2 cut(s)	2247, 2413
EarI	CTCTTC	4 cut(s)	620, 1016, 1812, 1851
Eco130I	CCWWGG	2 cut(s)	632, 952
Eco147I	AGGCCT	1 cut(s)	637
Eco24I	GRGCYC	1 cut(s)	976
Eco31I	GGTCTC	3 cut(s)	1649, 2016, 2283
Eco32I	GATATC	2 cut(s)	547, 1821
Eco47I	GGWCC	1 cut(s)	2194
Eco57I	CTGAAG	1 cut(s)	1767
Eco81I	CCTNAGG	1 cut(s)	1623
EcoNI	CCTNNNNNAGG	1 cut(s)	470
EcoO109I	RGGNCCY	1 cut(s)	1709
EcoRII	CCWGG	2 cut(s)	908, 1069
EcoRV	GATATC	2 cut(s)	547, 1821
EcoT14I	CCWWGG	2 cut(s)	632, 952
EcoT38I	GRGCYC	1 cut(s)	976
ErhI	CCWWGG	2 cut(s)	632, 952
Esp3I	CGTCTC	1 cut(s)	281
FaqI	GGGAC	2 cut(s)	431, 1389
FauNDI	CATATG	1 cut(s)	2190
FbaI	TGATCA	1 cut(s)	859
FblI	GTMKAC	2 cut(s)	141, 1304
FokI	GGATG	6 cut(s)	554, 749, 1380, 2057, 2166, 2275
FriOI	GRGCYC	1 cut(s)	976
FspBI	CTAG	3 cut(s)	113, 1454, 1878
GlaI	GCGC	1 cut(s)	133
GsaI	CCCAGC	2 cut(s)	138, 1090
GsuI	CTGGAG	2 cut(s)	756, 1053
HaeIII	GGCC	8 cut(s)	84, 119, 179, 233, 637, 848, 1610, 1710
HapII	CCGG	1 cut(s)	2401
HgaI	GACGC	2 cut(s)	139, 2303
HhaI	GCGC	1 cut(s)	134
Hin1I	GRCGYC	2 cut(s)	150, 2295
Hin6I	GCGC	1 cut(s)	132
HinP1I	GCGC	1 cut(s)	132
HincII	GTYRAC	1 cut(s)	2134
HindII	GTYRAC	1 cut(s)	2134
HindIII	AAGCTT	2 cut(s)	1403, 2213
HpaII	CCGG	1 cut(s)	2401
HphI	GGTGA	5 cut(s)	145, 563, 1103, 1611, 1978
Hpy166II	GTNNAC	9 cut(s)	142, 594, 898, 1113, 1287, 1305, 2134, 2307, 2366
Hpy188I	TCNGA	9 cut(s)	286, 345, 1081, 1786, 1838, 2058, 2085, 2253, 2394
Hpy8I	GTNNAC	9 cut(s)	142, 594, 898, 1113, 1287, 1305, 2134, 2307, 2366
HpyAV	CCTTC	6 cut(s)	118, 680, 1366, 1600, 1700, 1791
HpyCH4III	ACNGT	4 cut(s)	37, 1934, 2104, 2311
HpyCH4IV	ACGT	1 cut(s)	6
HpyF10VI	GCNNNNNNNGC	7 cut(s)	188, 203, 230, 687, 1346, 2294, 2418
HpyF3I	CTNAG	8 cut(s)	74, 86, 582, 639, 751, 1401, 1623, 1995
HpySE526I	ACGT	1 cut(s)	6
Hsp92I	GRCGYC	2 cut(s)	150, 2295
HspAI	GCGC	1 cut(s)	132
Ksp22I	TGATCA	1 cut(s)	859
LguI	GCTCTTC	1 cut(s)	1812
Lsp1109I	GCAGC	7 cut(s)	181, 638, 660, 1425, 1709, 2297, 2300
LweI	GCATC	3 cut(s)	291, 1349, 1402
MaeI	CTAG	3 cut(s)	113, 1454, 1878
MaeII	ACGT	1 cut(s)	6
MaeIII	GTNAC	5 cut(s)	151, 1462, 1474, 1774, 2156
MfeI	CAATTG	3 cut(s)	1344, 1470, 1557
MflI	RGATCY	1 cut(s)	323
MhlI	GDGCHC	2 cut(s)	976, 1807
MlyI	GAGTC	7 cut(s)	442, 1073, 1371, 1397, 1691, 1842, 2179
MmeI	TCCRAC	1 cut(s)	1337
MroXI	GAANNNNTTC	1 cut(s)	1023
MseI	TTAA	9 cut(s)	12, 470, 837, 941, 1182, 1221, 1991, 2022, 2181
MslI	CAYNNNNRTG	6 cut(s)	309, 315, 512, 540, 918, 2232
MspA1I	CMGCKG	6 cut(s)	194, 586, 651, 734, 1108, 2291
MspI	CCGG	1 cut(s)	2401
MspR9I	CCNGG	3 cut(s)	910, 1071, 2402
MunI	CAATTG	3 cut(s)	1344, 1470, 1557
Mva1269I	GAATGC	1 cut(s)	385
MvaI	CCWGG	2 cut(s)	910, 1071
MvnI	CGCG	1 cut(s)	1357
MwoI	GCNNNNNNNGC	7 cut(s)	188, 203, 230, 687, 1346, 2294, 2418
NciI	CCSGG	1 cut(s)	2402
NcoI	CCATGG	1 cut(s)	952
NdeI	CATATG	1 cut(s)	2190
NlaIV	GGNNCC	6 cut(s)	802, 886, 906, 1002, 1264, 1423
NmeAIII	GCCGAG	1 cut(s)	208
NmuCI	GTSAC	3 cut(s)	151, 1474, 1774
NspI	RCATGY	4 cut(s)	511, 917, 1768, 2416
NspV	TTCGAA	1 cut(s)	1922
PaeI	GCATGC	1 cut(s)	917
PagI	TCATGA	2 cut(s)	372, 1984
PceI	AGGCCT	1 cut(s)	637
PciI	ACATGT	1 cut(s)	1764
PciSI	GCTCTTC	1 cut(s)	1812
PctI	GAATGC	1 cut(s)	385
PdmI	GAANNNNTTC	1 cut(s)	1023
PfeI	GAWTC	3 cut(s)	532, 551, 1616
PflMI	CCANNNNNTGG	1 cut(s)	1888
PleI	GAGTC	7 cut(s)	442, 1072, 1371, 1396, 1690, 1841, 2178
PpsI	GAGTC	7 cut(s)	442, 1072, 1371, 1396, 1690, 1841, 2178
Ppu21I	YACGTR	1 cut(s)	7
PscI	ACATGT	1 cut(s)	1764
PshAI	GACNNNNGTC	1 cut(s)	2169
Psp6I	CCWGG	2 cut(s)	908, 1069
PspFI	CCCAGC	2 cut(s)	134, 1086
PspGI	CCWGG	2 cut(s)	908, 1069
PspN4I	GGNNCC	6 cut(s)	802, 886, 906, 1002, 1264, 1423
PspPI	GGNCC	4 cut(s)	118, 847, 1709, 2194
PstNI	CAGNNNCTG	2 cut(s)	1322, 2291
PsuI	RGATCY	1 cut(s)	323
PvuII	CAGCTG	4 cut(s)	651, 734, 1108, 2291
RsaI	GTAC	6 cut(s)	5, 899, 1112, 1152, 1288, 2365
RsaNI	GTAC	6 cut(s)	4, 898, 1111, 1151, 1287, 2364
RseI	CAYNNNNRTG	6 cut(s)	309, 315, 512, 540, 918, 2232
SapI	GCTCTTC	1 cut(s)	1812
SaqAI	TTAA	9 cut(s)	12, 470, 837, 941, 1182, 1221, 1991, 2022, 2181
Sau96I	GGNCC	4 cut(s)	118, 847, 1709, 2194
SchI	GAGTC	7 cut(s)	442, 1073, 1371, 1397, 1691, 1842, 2179
ScrFI	CCNGG	3 cut(s)	910, 1071, 2402
SduI	GDGCHC	2 cut(s)	976, 1807
SfaNI	GCATC	3 cut(s)	291, 1349, 1402
SfcI	CTRYAG	1 cut(s)	1930
SfuI	TTCGAA	1 cut(s)	1922
SinI	GGWCC	1 cut(s)	2194
SmiMI	CAYNNNNRTG	6 cut(s)	309, 315, 512, 540, 918, 2232
SmlI	CTYRAG	2 cut(s)	452, 1676
SmoI	CTYRAG	2 cut(s)	452, 1676
SphI	GCATGC	1 cut(s)	917
SseBI	AGGCCT	1 cut(s)	637
SspMI	CTAG	3 cut(s)	113, 1454, 1878
StuI	AGGCCT	1 cut(s)	637
StyD4I	CCNGG	3 cut(s)	908, 1069, 2400
StyI	CCWWGG	2 cut(s)	632, 952
TaaI	ACNGT	4 cut(s)	37, 1934, 2104, 2311
TaiI	ACGT	1 cut(s)	9
TaqI	TCGA	5 cut(s)	45, 549, 970, 1922, 2145
TatI	WGTACW	3 cut(s)	897, 1110, 1150
TauI	GCSGC	5 cut(s)	28, 182, 194, 236, 386
TfiI	GAWTC	3 cut(s)	532, 551, 1616
Tru1I	TTAA	9 cut(s)	12, 470, 837, 941, 1182, 1221, 1991, 2022, 2181
Tru9I	TTAA	9 cut(s)	12, 470, 837, 941, 1182, 1221, 1991, 2022, 2181
TscAI	CASTG	2 cut(s)	104, 1483
TseFI	GTSAC	3 cut(s)	151, 1474, 1774
TseI	GCWGC	7 cut(s)	194, 648, 651, 1413, 1697, 2285, 2288
Tsp45I	GTSAC	3 cut(s)	151, 1474, 1774
TspGWI	ACGGA	1 cut(s)	755
TspRI	CASTG	2 cut(s)	104, 1483
Van91I	CCANNNNNTGG	1 cut(s)	1888
VpaK11BI	GGWCC	1 cut(s)	2194
XagI	CCTNNNNNAGG	1 cut(s)	470
XapI	RAATTY	7 cut(s)	929, 1097, 1176, 1540, 1840, 1884, 2061
XceI	RCATGY	4 cut(s)	511, 917, 1768, 2416
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2204
XmiI	GTMKAC	2 cut(s)	141, 1304
XmnI	GAANNNNTTC	1 cut(s)	1023
XspI	CTAG	3 cut(s)	113, 1454, 1878

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.