Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2087 |
| AccB1I | GGYRCC | 1 cut(s) | 1000 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1888 |
| AccI | GTMKAC | 2 cut(s) | 141, 1304 |
| AccII | CGCG | 3 cut(s) | 61, 182, 1357 |
| AclWI | GGATC | 2 cut(s) | 945, 2161 |
| AcoI | YGGCCR | 1 cut(s) | 177 |
| AcsI | RAATTY | 8 cut(s) | 531, 929, 1097, 1176, 1279, 1540, 1840, 1884 |
| AcuI | CTGAAG | 2 cut(s) | 1767, 2105 |
| AcyI | GRCGYC | 1 cut(s) | 150 |
| AfaI | GTAC | 4 cut(s) | 305, 899, 1288, 2362 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 112, 472, 1888, 2207, 2208 |
| AflIII | ACRYGT | 1 cut(s) | 1764 |
| AjnI | CCWGG | 4 cut(s) | 908, 1069, 1152, 1424 |
| Alw21I | GWGCWC | 2 cut(s) | 976, 2387 |
| AlwI | GGATC | 2 cut(s) | 945, 2161 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1165, 1322, 1636 |
| AoxI | GGCC | 6 cut(s) | 117, 177, 497, 1137, 1708, 2412 |
| ApeKI | GCWGC | 9 cut(s) | 90, 191, 233, 651, 777, 1697, 1802, 2285, 2288 |
| ApoI | RAATTY | 8 cut(s) | 531, 929, 1097, 1176, 1279, 1540, 1840, 1884 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1134, 1166 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1023 |
| AspLEI | GCGC | 3 cut(s) | 61, 63, 134 |
| AspS9I | GGNCC | 3 cut(s) | 118, 1709, 2194 |
| AsuC2I | CCSGG | 1 cut(s) | 2399 |
| AsuHPI | GGTGA | 7 cut(s) | 22, 145, 203, 1103, 1611, 1964, 1978 |
| AvaII | GGWCC | 1 cut(s) | 2194 |
| AxyI | CCTNAGG | 1 cut(s) | 1623 |
| BanI | GGYRCC | 1 cut(s) | 1000 |
| BanII | GRGCYC | 2 cut(s) | 909, 976 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2078, 2110 |
| BauI | CACGAG | 2 cut(s) | 975, 2280 |
| BbsI | GAAGAC | 1 cut(s) | 1677 |
| Bbv12I | GWGCWC | 2 cut(s) | 976, 2387 |
| BbvCI | CCTCAGC | 1 cut(s) | 501 |
| BbvI | GCAGC | 9 cut(s) | 102, 178, 220, 638, 789, 1684, 1789, 2297, 2300 |
| BccI | CCATC | 7 cut(s) | 14, 1028, 1405, 1785, 1993, 2039, 2371 |
| BceAI | ACGGC | 2 cut(s) | 72, 1494 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 956, 990 |
| BciT130I | CCWGG | 4 cut(s) | 910, 1071, 1154, 1426 |
| BciVI | GTATCC | 1 cut(s) | 1219 |
| BclI | TGATCA | 1 cut(s) | 859 |
| BcnI | CCSGG | 1 cut(s) | 2399 |
| BfaI | CTAG | 3 cut(s) | 1337, 1454, 1878 |
| BfuI | GTATCC | 1 cut(s) | 1219 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 230 |
| BglII | AGATCT | 1 cut(s) | 323 |
| BlpI | GCTNAGC | 3 cut(s) | 74, 86, 1629 |
| Bme1390I | CCNGG | 5 cut(s) | 910, 1071, 1154, 1426, 2399 |
| Bme18I | GGWCC | 1 cut(s) | 2194 |
| BmgT120I | GGNCC | 3 cut(s) | 118, 1709, 2194 |
| BmiI | GGNNCC | 4 cut(s) | 906, 1002, 1264, 1423 |
| BmrFI | CCNGG | 5 cut(s) | 910, 1071, 1154, 1426, 2399 |
| BmsI | GCATC | 3 cut(s) | 976, 1349, 2284 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2169 |
| BpiI | GAAGAC | 1 cut(s) | 1677 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2033, 2065 |
| BpmI | CTGGAG | 2 cut(s) | 756, 1053 |
| Bpu10I | CCTNAGC | 1 cut(s) | 501 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 74, 86, 1629 |
| BpuEI | CTTGAG | 1 cut(s) | 473 |
| BpuMI | CCSGG | 1 cut(s) | 2399 |
| Bsa29I | ATCGAT | 2 cut(s) | 1432, 1789 |
| BsaHI | GRCGYC | 1 cut(s) | 150 |
| BsaI | GGTCTC | 3 cut(s) | 1649, 2016, 2255 |
| BsaJI | CCNNGG | 2 cut(s) | 180, 908 |
| BsaWI | WCCGGW | 1 cut(s) | 1199 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1189, 1219 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 112, 472, 1888, 2207, 2208 |
| Bse21I | CCTNAGG | 1 cut(s) | 1623 |
| BseBI | CCWGG | 4 cut(s) | 910, 1071, 1154, 1426 |
| BseCI | ATCGAT | 2 cut(s) | 1432, 1789 |
| BseDI | CCNNGG | 2 cut(s) | 180, 908 |
| BseGI | GGATG | 6 cut(s) | 25, 547, 803, 1393, 1777, 2050 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 112, 472, 1888, 2207, 2208 |
| BseMII | CTCAG | 8 cut(s) | 65, 515, 596, 1281, 1614, 1643, 1680, 1986 |
| BsePI | GCGCGC | 1 cut(s) | 59 |
| BseXI | GCAGC | 9 cut(s) | 102, 178, 220, 638, 789, 1684, 1789, 2297, 2300 |
| BseYI | CCCAGC | 2 cut(s) | 134, 1086 |
| BsgI | GTGCAG | 1 cut(s) | 2304 |
| Bsh1236I | CGCG | 3 cut(s) | 61, 182, 1357 |
| BshFI | GGCC | 6 cut(s) | 119, 179, 499, 1139, 1710, 2414 |
| BshNI | GGYRCC | 1 cut(s) | 1000 |
| BshVI | ATCGAT | 2 cut(s) | 1432, 1789 |
| BsiHKAI | GWGCWC | 2 cut(s) | 976, 2387 |
| BsiSI | CCGG | 2 cut(s) | 1200, 2398 |
| BslFI | GGGAC | 3 cut(s) | 431, 814, 1364 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 112, 472, 1888, 2207, 2208 |
| BsmBI | CGTCTC | 1 cut(s) | 281 |
| BsmFI | GGGAC | 3 cut(s) | 431, 814, 1364 |
| BsmI | GAATGC | 1 cut(s) | 385 |
| BsnI | GGCC | 6 cut(s) | 119, 179, 499, 1139, 1710, 2414 |
| Bso31I | GGTCTC | 3 cut(s) | 1649, 2016, 2255 |
| Bsp1286I | GDGCHC | 3 cut(s) | 909, 976, 2387 |
| Bsp1407I | TGTACA | 1 cut(s) | 303 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 74, 86, 1629 |
| BspANI | GGCC | 6 cut(s) | 119, 179, 499, 1139, 1710, 2414 |
| BspCNI | CTCAG | 8 cut(s) | 66, 514, 595, 1282, 1615, 1642, 1681, 1987 |
| BspDI | ATCGAT | 2 cut(s) | 1432, 1789 |
| BspFNI | CGCG | 3 cut(s) | 61, 182, 1357 |
| BspHI | TCATGA | 1 cut(s) | 1984 |
| BspLI | GGNNCC | 4 cut(s) | 906, 1002, 1264, 1423 |
| BspPI | GGATC | 2 cut(s) | 945, 2161 |
| BspQI | GCTCTTC | 3 cut(s) | 957, 1098, 1812 |
| BspT107I | GGYRCC | 1 cut(s) | 1000 |
| BspTNI | GGTCTC | 3 cut(s) | 1649, 2016, 2255 |
| BsrGI | TGTACA | 1 cut(s) | 303 |
| BssECI | CCNNGG | 2 cut(s) | 180, 908 |
| BssHII | GCGCGC | 1 cut(s) | 59 |
| BssNAI | GTATAC | 2 cut(s) | 142, 1305 |
| BssNI | GRCGYC | 1 cut(s) | 150 |
| BssSI | CACGAG | 2 cut(s) | 975, 2280 |
| Bst1107I | GTATAC | 2 cut(s) | 142, 1305 |
| Bst2BI | CACGAG | 2 cut(s) | 975, 2280 |
| Bst2UI | CCWGG | 4 cut(s) | 910, 1071, 1154, 1426 |
| Bst4CI | ACNGT | 4 cut(s) | 1167, 1934, 2104, 2311 |
| Bst6I | CTCTTC | 6 cut(s) | 8, 957, 1016, 1098, 1235, 1812 |
| BstACI | GRCGYC | 1 cut(s) | 150 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1346, 2294 |
| BstAUI | TGTACA | 1 cut(s) | 303 |
| BstC8I | GCNNGC | 5 cut(s) | 61, 164, 226, 915, 1607 |
| BstDSI | CCRYGG | 1 cut(s) | 180 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 470 |
| BstF5I | GGATG | 6 cut(s) | 25, 547, 803, 1393, 1777, 2050 |
| BstFNI | CGCG | 3 cut(s) | 61, 182, 1357 |
| BstHHI | GCGC | 3 cut(s) | 61, 63, 134 |
| BstNI | CCWGG | 4 cut(s) | 910, 1071, 1154, 1426 |
| BstNSI | RCATGY | 5 cut(s) | 511, 917, 1609, 1768, 2266 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2169 |
| BstSCI | CCNGG | 5 cut(s) | 908, 1069, 1152, 1424, 2397 |
| BstUI | CGCG | 3 cut(s) | 61, 182, 1357 |
| BstV1I | GCAGC | 9 cut(s) | 102, 178, 220, 638, 789, 1684, 1789, 2297, 2300 |
| BstV2I | GAAGAC | 1 cut(s) | 1677 |
| BstX2I | RGATCY | 3 cut(s) | 323, 937, 2153 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1767 |
| BstYI | RGATCY | 3 cut(s) | 323, 937, 2153 |
| BstZ17I | GTATAC | 2 cut(s) | 142, 1305 |
| Bsu15I | ATCGAT | 2 cut(s) | 1432, 1789 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1623 |
| BsuI | GTATCC | 1 cut(s) | 1219 |
| BsuRI | GGCC | 6 cut(s) | 119, 179, 499, 1139, 1710, 2414 |
| BsuTUI | ATCGAT | 2 cut(s) | 1432, 1789 |
| BtgI | CCRYGG | 1 cut(s) | 180 |
| BtsCI | GGATG | 6 cut(s) | 25, 547, 803, 1393, 1777, 2050 |
| BtsI | GCAGTG | 2 cut(s) | 97, 1464 |
| BtsIMutI | CAGTG | 3 cut(s) | 97, 322, 1464 |
| Cac8I | GCNNGC | 5 cut(s) | 61, 164, 226, 915, 1607 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1165, 1322, 1636 |
| CciI | TCATGA | 1 cut(s) | 1984 |
| CfoI | GCGC | 3 cut(s) | 61, 63, 134 |
| Cfr13I | GGNCC | 3 cut(s) | 118, 1709, 2194 |
| Cfr42I | CCGCGG | 1 cut(s) | 183 |
| ClaI | ATCGAT | 2 cut(s) | 1432, 1789 |
| CseI | GACGC | 3 cut(s) | 139, 457, 1671 |
| Csp6I | GTAC | 4 cut(s) | 304, 898, 1287, 2361 |
| CviQI | GTAC | 4 cut(s) | 304, 898, 1287, 2361 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2087 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2087 |
| EaeI | YGGCCR | 1 cut(s) | 177 |
| Eam1104I | CTCTTC | 6 cut(s) | 8, 957, 1016, 1098, 1235, 1812 |
| EarI | CTCTTC | 6 cut(s) | 8, 957, 1016, 1098, 1235, 1812 |
| Ecl136II | GAGCTC | 1 cut(s) | 974 |
| Eco147I | AGGCCT | 1 cut(s) | 499 |
| Eco24I | GRGCYC | 2 cut(s) | 909, 976 |
| Eco31I | GGTCTC | 3 cut(s) | 1649, 2016, 2255 |
| Eco32I | GATATC | 1 cut(s) | 1821 |
| Eco47I | GGWCC | 1 cut(s) | 2194 |
| Eco53kI | GAGCTC | 1 cut(s) | 974 |
| Eco57I | CTGAAG | 2 cut(s) | 1767, 2105 |
| Eco81I | CCTNAGG | 1 cut(s) | 1623 |
| EcoICRI | GAGCTC | 1 cut(s) | 974 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 470 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1709 |
| EcoRI | GAATTC | 1 cut(s) | 531 |
| EcoRII | CCWGG | 4 cut(s) | 908, 1069, 1152, 1424 |
| EcoRV | GATATC | 1 cut(s) | 1821 |
| EcoT38I | GRGCYC | 2 cut(s) | 909, 976 |
| Esp3I | CGTCTC | 1 cut(s) | 281 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 263, 295 |
| FaqI | GGGAC | 3 cut(s) | 431, 814, 1364 |
| FauNDI | CATATG | 1 cut(s) | 2190 |
| FbaI | TGATCA | 1 cut(s) | 859 |
| FblI | GTMKAC | 2 cut(s) | 141, 1304 |
| FokI | GGATG | 6 cut(s) | 32, 554, 790, 1380, 1784, 2057 |
| FriOI | GRGCYC | 2 cut(s) | 909, 976 |
| FspBI | CTAG | 3 cut(s) | 1337, 1454, 1878 |
| GlaI | GCGC | 3 cut(s) | 60, 62, 133 |
| GsaI | CCCAGC | 2 cut(s) | 138, 1090 |
| GsuI | CTGGAG | 2 cut(s) | 756, 1053 |
| HaeIII | GGCC | 6 cut(s) | 119, 179, 499, 1139, 1710, 2414 |
| HapII | CCGG | 2 cut(s) | 1200, 2398 |
| HgaI | GACGC | 3 cut(s) | 139, 457, 1671 |
| HhaI | GCGC | 3 cut(s) | 61, 63, 134 |
| Hin1I | GRCGYC | 1 cut(s) | 150 |
| Hin6I | GCGC | 3 cut(s) | 59, 61, 132 |
| HinP1I | GCGC | 3 cut(s) | 59, 61, 132 |
| HinfI | GANTC | 6 cut(s) | 551, 1064, 1388, 1429, 1616, 2170 |
| HpaII | CCGG | 2 cut(s) | 1200, 2398 |
| HphI | GGTGA | 7 cut(s) | 22, 145, 203, 1103, 1611, 1964, 1978 |
| Hpy166II | GTNNAC | 8 cut(s) | 142, 594, 757, 898, 1287, 1305, 2307, 2363 |
| Hpy188I | TCNGA | 8 cut(s) | 286, 345, 563, 576, 1690, 1786, 2058, 2391 |
| Hpy188III | TCNNGA | 8 cut(s) | 392, 416, 445, 624, 977, 1811, 1985, 2209 |
| Hpy8I | GTNNAC | 8 cut(s) | 142, 594, 757, 898, 1287, 1305, 2307, 2363 |
| HpyCH4III | ACNGT | 4 cut(s) | 1167, 1934, 2104, 2311 |
| Hsp92I | GRCGYC | 1 cut(s) | 150 |
| HspAI | GCGC | 3 cut(s) | 59, 61, 132 |
| Ksp22I | TGATCA | 1 cut(s) | 859 |
| KspI | CCGCGG | 1 cut(s) | 183 |
| LguI | GCTCTTC | 3 cut(s) | 957, 1098, 1812 |
| LmnI | GCTCC | 1 cut(s) | 904 |
| Lsp1109I | GCAGC | 9 cut(s) | 102, 178, 220, 638, 789, 1684, 1789, 2297, 2300 |
| LweI | GCATC | 3 cut(s) | 976, 1349, 2284 |
| MaeI | CTAG | 3 cut(s) | 1337, 1454, 1878 |
| MaeIII | GTNAC | 5 cut(s) | 151, 1389, 1462, 1474, 1774 |
| MfeI | CAATTG | 5 cut(s) | 641, 1039, 1344, 1470, 1557 |
| MflI | RGATCY | 3 cut(s) | 323, 937, 2153 |
| MhlI | GDGCHC | 3 cut(s) | 909, 976, 2387 |
| MlyI | GAGTC | 3 cut(s) | 1073, 1397, 2179 |
| MmeI | TCCRAC | 2 cut(s) | 508, 1337 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1023 |
| MseI | TTAA | 7 cut(s) | 470, 837, 1221, 1506, 2022, 2181, 2425 |
| MslI | CAYNNNNRTG | 5 cut(s) | 315, 512, 540, 918, 2232 |
| MspA1I | CMGCKG | 2 cut(s) | 182, 586 |
| MspI | CCGG | 2 cut(s) | 1200, 2398 |
| MspR9I | CCNGG | 5 cut(s) | 910, 1071, 1154, 1426, 2399 |
| MunI | CAATTG | 5 cut(s) | 641, 1039, 1344, 1470, 1557 |
| Mva1269I | GAATGC | 1 cut(s) | 385 |
| MvaI | CCWGG | 4 cut(s) | 910, 1071, 1154, 1426 |
| MvnI | CGCG | 3 cut(s) | 61, 182, 1357 |
| NciI | CCSGG | 1 cut(s) | 2399 |
| NdeI | CATATG | 1 cut(s) | 2190 |
| NlaIV | GGNNCC | 4 cut(s) | 906, 1002, 1264, 1423 |
| NmuCI | GTSAC | 4 cut(s) | 151, 1389, 1462, 1474 |
| NspI | RCATGY | 5 cut(s) | 511, 917, 1609, 1768, 2266 |
| PaeI | GCATGC | 2 cut(s) | 917, 1609 |
| PagI | TCATGA | 1 cut(s) | 1984 |
| PauI | GCGCGC | 1 cut(s) | 59 |
| PceI | AGGCCT | 1 cut(s) | 499 |
| PciI | ACATGT | 1 cut(s) | 1764 |
| PciSI | GCTCTTC | 3 cut(s) | 957, 1098, 1812 |
| PctI | GAATGC | 1 cut(s) | 385 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1023 |
| PfeI | GAWTC | 3 cut(s) | 551, 1429, 1616 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1888 |
| PfoI | TCCNGGA | 1 cut(s) | 1424 |
| PleI | GAGTC | 3 cut(s) | 1072, 1396, 2178 |
| PpsI | GAGTC | 3 cut(s) | 1072, 1396, 2178 |
| PscI | ACATGT | 1 cut(s) | 1764 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2169 |
| Psp124BI | GAGCTC | 1 cut(s) | 976 |
| Psp6I | CCWGG | 4 cut(s) | 908, 1069, 1152, 1424 |
| PspFI | CCCAGC | 2 cut(s) | 134, 1086 |
| PspGI | CCWGG | 4 cut(s) | 908, 1069, 1152, 1424 |
| PspN4I | GGNNCC | 4 cut(s) | 906, 1002, 1264, 1423 |
| PspPI | GGNCC | 3 cut(s) | 118, 1709, 2194 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1405, 1437 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1165, 1322, 1636 |
| PsuI | RGATCY | 3 cut(s) | 323, 937, 2153 |
| PteI | GCGCGC | 1 cut(s) | 59 |
| RsaI | GTAC | 4 cut(s) | 305, 899, 1288, 2362 |
| RsaNI | GTAC | 4 cut(s) | 304, 898, 1287, 2361 |
| RseI | CAYNNNNRTG | 5 cut(s) | 315, 512, 540, 918, 2232 |
| SacI | GAGCTC | 1 cut(s) | 976 |
| SacII | CCGCGG | 1 cut(s) | 183 |
| SapI | GCTCTTC | 3 cut(s) | 957, 1098, 1812 |
| SaqAI | TTAA | 7 cut(s) | 470, 837, 1221, 1506, 2022, 2181, 2425 |
| Sau96I | GGNCC | 3 cut(s) | 118, 1709, 2194 |
| SchI | GAGTC | 3 cut(s) | 1073, 1397, 2179 |
| ScrFI | CCNGG | 5 cut(s) | 910, 1071, 1154, 1426, 2399 |
| SduI | GDGCHC | 3 cut(s) | 909, 976, 2387 |
| SfaNI | GCATC | 3 cut(s) | 976, 1349, 2284 |
| Sfr303I | CCGCGG | 1 cut(s) | 183 |
| SgrBI | CCGCGG | 1 cut(s) | 183 |
| SinI | GGWCC | 1 cut(s) | 2194 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 315, 512, 540, 918, 2232 |
| SmlI | CTYRAG | 1 cut(s) | 452 |
| SmoI | CTYRAG | 1 cut(s) | 452 |
| SphI | GCATGC | 2 cut(s) | 917, 1609 |
| SseBI | AGGCCT | 1 cut(s) | 499 |
| SspI | AATATT | 1 cut(s) | 1927 |
| SspMI | CTAG | 3 cut(s) | 1337, 1454, 1878 |
| SstI | GAGCTC | 1 cut(s) | 976 |
| StuI | AGGCCT | 1 cut(s) | 499 |
| StyD4I | CCNGG | 5 cut(s) | 908, 1069, 1152, 1424, 2397 |
| TaaI | ACNGT | 4 cut(s) | 1167, 1934, 2104, 2311 |
| TaqI | TCGA | 5 cut(s) | 168, 970, 1432, 1789, 1936 |
| TatI | WGTACW | 4 cut(s) | 303, 897, 1286, 2360 |
| TauI | GCSGC | 4 cut(s) | 28, 182, 197, 386 |
| TfiI | GAWTC | 3 cut(s) | 551, 1429, 1616 |
| Tru1I | TTAA | 7 cut(s) | 470, 837, 1221, 1506, 2022, 2181, 2425 |
| Tru9I | TTAA | 7 cut(s) | 470, 837, 1221, 1506, 2022, 2181, 2425 |
| TscAI | CASTG | 3 cut(s) | 104, 322, 1471 |
| TseFI | GTSAC | 4 cut(s) | 151, 1389, 1462, 1474 |
| TseI | GCWGC | 9 cut(s) | 90, 191, 233, 651, 777, 1697, 1802, 2285, 2288 |
| Tsp45I | GTSAC | 4 cut(s) | 151, 1389, 1462, 1474 |
| TspDTI | ATGAA | 9 cut(s) | 186, 378, 389, 683, 1003, 1137, 1582, 1731, 1973 |
| TspRI | CASTG | 3 cut(s) | 104, 322, 1471 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1888 |
| VpaK11BI | GGWCC | 1 cut(s) | 2194 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 470 |
| XapI | RAATTY | 8 cut(s) | 531, 929, 1097, 1176, 1279, 1540, 1840, 1884 |
| XceI | RCATGY | 5 cut(s) | 511, 917, 1609, 1768, 2266 |
| XmiI | GTMKAC | 2 cut(s) | 141, 1304 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1023 |
| XspI | CTAG | 3 cut(s) | 1337, 1454, 1878 |